Name: CXXC4 | Sequence: fasta or formatted (198aa) | NCBI GI: 13376816 | |
Description: CXXC finger 4
|
Referenced in:
| ||
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.1 22 3 C cysteine 6.6 13 1 D aspartate 1.5 3 1 E glutamate 5.1 10 2 F phenylalanine 3.5 7 2 G glycine 8.1 16 2 H histidine 3.0 6 2 I isoleucine 3.5 7 1 K lysine 7.1 14 3 L leucine 7.1 14 1 M methionine 2.5 5 1 N asparagine 5.1 10 1 P proline 8.1 16 2 Q glutamine 2.5 5 1 R arginine 6.1 12 1 S serine 10.6 21 8 T threonine 4.0 8 1 V valine 4.0 8 1 W tryptophan 0.5 1 1 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 CXXC finger 4 CXXC5 0.296 CXXC finger 5 TET1 0.157 CXXC finger 6 MLL 0.049 myeloid/lymphoid or mixed-lineage leukemia protein [... MLL4 0.041 myeloid/lymphoid or mixed-lineage leukemia 4 CXXC1 0.034 CXXC finger 1 (PHD domain) isoform 1 CXXC1 0.034 CXXC finger 1 (PHD domain) isoform 2 MBD1 0.031 methyl-CpG binding domain protein 1 isoform 2 MBD1 0.031 methyl-CpG binding domain protein 1 isoform PCM1 [Ho... MBD1 0.031 methyl-CpG binding domain protein 1 isoform 1 DNMT1 0.028 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... DNMT1 0.028 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... EGLN1 0.028 egl nine homolog 1 FBXL19 0.026 F-box and leucine-rich repeat protein 19 DMRTA1 0.023 DMRT-like family A1 MEX3C 0.023 ring finger and KH domain containing 2 SLC2A9 0.021 solute carrier family 2, member 9 protein isoform 2 ... SLC2A9 0.021 solute carrier family 2, member 9 protein isoform 1 ... MEX3B 0.021 mex-3 homolog B FOXF2 0.021 forkhead box F2 LTBP2 0.018 latent transforming growth factor beta binding protei... ZNF703 0.018 zinc finger protein 703 MBD1 0.018 methyl-CpG binding domain protein 1 isoform 4 MBD1 0.018 methyl-CpG binding domain protein 1 isoform 3 [Homo... LOC100133142 0.018 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.018 PREDICTED: similar to zinc finger protein 208 [Homo... MED13L 0.018 mediator complex subunit 13-like PLXNA2 0.015 plexin A2 KDM2A 0.015 F-box and leucine-rich repeat protein 11 ELN 0.015 elastin isoform e precursorHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.