NPAS3 27695

Name: NPAS3	Sequence: fasta or formatted (920aa)		NCBI GI: 41281831
Description: neuronal PAS domain protein 3 isoform 2		Referenced in: Neurons Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [901aa] neuronal PAS domain protein 3 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 71 3 C cysteine 1.0 9 1 D aspartate 5.5 51 2 E glutamate 6.1 56 1 F phenylalanine 2.7 25 2 G glycine 8.9 82 11 H histidine 2.8 26 2 I isoleucine 4.3 40 2 K lysine 4.9 45 2 L leucine 8.2 75 2 M methionine 2.4 22 1 N asparagine 4.9 45 1 P proline 6.8 63 3 Q glutamine 3.5 32 2 R arginine 5.5 51 3 S serine 11.5 106 4 T threonine 5.2 48 2 V valine 4.9 45 3 W tryptophan 0.7 6 1 Y tyrosine 2.4 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuronal PAS domain protein 3 isoform 2 NPAS3 0.971 neuronal PAS domain protein 3 isoform 1 NPAS1 0.239 neuronal PAS domain protein 1 SIM2 0.148 single-minded homolog 2 long isoform SIM2 0.148 single-minded homolog 2 short isoform SIM1 0.146 single-minded homolog 1 HIF1A 0.118 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.118 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.109 endothelial PAS domain protein 1 HIF3A 0.100 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.100 hypoxia inducible factor 3, alpha subunit isoform c ... HIF3A 0.076 hypoxia inducible factor 3, alpha subunit isoform b ... AHR 0.057 aryl hydrocarbon receptor ARNTL2 0.043 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.041 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.041 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.041 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.036 aryl hydrocarbon receptor nuclear translocator isofor... ARNT 0.035 aryl hydrocarbon receptor nuclear translocator isofo... CLOCK 0.032 clock ARNT2 0.031 aryl hydrocarbon receptor nuclear translocator 2 [Ho... AHRR 0.030 arylhydrocarbon receptor repressor NPAS2 0.027 neuronal PAS domain protein 2 NPAS4 0.025 neuronal PAS domain protein 4 DSPP 0.023 dentin sialophosphoprotein preproprotein NCOA1 0.022 nuclear receptor coactivator 1 isoform 2 NCOA1 0.022 nuclear receptor coactivator 1 isoform 3 NCOA1 0.022 nuclear receptor coactivator 1 isoform 1 ARNT 0.020 aryl hydrocarbon receptor nuclear translocator isofo... NCOA2 0.019 nuclear receptor coactivator 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.