NPAS3 1547

Name: NPAS3	Sequence: fasta or formatted (901aa)		NCBI GI: 11545847
Description: neuronal PAS domain protein 3 isoform 1		Referenced in: Neurons Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [920aa] neuronal PAS domain protein 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 71 3 C cysteine 0.8 7 1 D aspartate 5.7 51 2 E glutamate 6.0 54 1 F phenylalanine 2.8 25 2 G glycine 9.0 81 11 H histidine 2.9 26 2 I isoleucine 4.2 38 2 K lysine 4.8 43 2 L leucine 8.2 74 2 M methionine 2.2 20 1 N asparagine 5.0 45 1 P proline 6.9 62 3 Q glutamine 3.4 31 2 R arginine 5.5 50 3 S serine 11.7 105 4 T threonine 5.2 47 2 V valine 4.9 44 3 W tryptophan 0.6 5 1 Y tyrosine 2.4 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuronal PAS domain protein 3 isoform 1 NPAS3 0.994 neuronal PAS domain protein 3 isoform 2 NPAS1 0.249 neuronal PAS domain protein 1 SIM2 0.155 single-minded homolog 2 long isoform SIM2 0.155 single-minded homolog 2 short isoform SIM1 0.153 single-minded homolog 1 HIF1A 0.125 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.125 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.115 endothelial PAS domain protein 1 HIF3A 0.107 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.107 hypoxia inducible factor 3, alpha subunit isoform c ... HIF3A 0.080 hypoxia inducible factor 3, alpha subunit isoform b ... AHR 0.061 aryl hydrocarbon receptor ARNTL2 0.046 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.046 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.046 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.046 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.042 aryl hydrocarbon receptor nuclear translocator isofor... ARNT 0.040 aryl hydrocarbon receptor nuclear translocator isofo... ARNT2 0.038 aryl hydrocarbon receptor nuclear translocator 2 [Ho... CLOCK 0.035 clock AHRR 0.033 arylhydrocarbon receptor repressor NPAS2 0.031 neuronal PAS domain protein 2 NPAS4 0.030 neuronal PAS domain protein 4 NCOA1 0.026 nuclear receptor coactivator 1 isoform 2 NCOA1 0.026 nuclear receptor coactivator 1 isoform 3 NCOA1 0.026 nuclear receptor coactivator 1 isoform 1 ARNT 0.026 aryl hydrocarbon receptor nuclear translocator isofo... DSPP 0.024 dentin sialophosphoprotein preproprotein NCOA2 0.022 nuclear receptor coactivator 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.