Guide to the Human Genome
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Name: FAM83H Sequence: fasta or formatted (1179aa) NCBI GI: 157311635
Description:

FAM83H

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5        124           4
 C cysteine            0.8          9           1
 D aspartate           4.8         57           2
 E glutamate           7.8         92           2
 F phenylalanine       4.3         51           2
 G glycine             9.8        116           3
 H histidine           2.5         29           2
 I isoleucine          1.1         13           1
 K lysine              3.3         39           2
 L leucine             8.9        105           2
 M methionine          1.5         18           1
 N asparagine          1.1         13           1
 P proline            10.2        120           4
 Q glutamine           4.0         47           3
 R arginine            8.7        103           2
 S serine              9.2        108           3
 T threonine           3.8         45           2
 V valine              5.2         61           2
 W tryptophan          0.5          6           1
 Y tyrosine            2.0         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FAM83H 
FAM83B                0.099   hypothetical protein LOC222584 
FAM83C                0.069   hypothetical protein LOC128876 
FAM83E                0.068   hypothetical protein LOC54854 
FAM83G                0.065   hypothetical protein LOC644815 
FAM83D                0.063   hypothetical protein LOC81610 
FAM83A                0.062   hypothetical protein LOC84985 isoform a 
FAM83F                0.060   hypothetical protein LOC113828 
FAM83A                0.060   hypothetical protein LOC84985 isoform b 
SPEG                  0.014   SPEG complex locus 
APC2                  0.012   adenomatosis polyposis coli 2 
COL2A1                0.011   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.011   collagen, type II, alpha 1 isoform 2 precursor [Hom...
COL5A1                0.011   alpha 1 type V collagen preproprotein 
LMTK3                 0.011   lemur tyrosine kinase 3 
REXO1                 0.011   transcription elongation factor B polypeptide 3 bin...
COL3A1                0.010   collagen type III alpha 1 preproprotein 
NACA                  0.010   nascent polypeptide-associated complex alpha subuni...
CASKIN2               0.010   cask-interacting protein 2 isoform b 
CASKIN2               0.010   cask-interacting protein 2 isoform a 
KIAA1522              0.009   hypothetical protein LOC57648 
SRRM1                 0.009   serine/arginine repetitive matrix 1 
COL11A2               0.009   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.009   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.009   collagen, type XI, alpha 2 isoform 1 preproprotein ...
C7orf51               0.009   hypothetical protein FLJ37538 
NEFH                  0.008   neurofilament, heavy polypeptide 200kDa 
COL9A3                0.008   alpha 3 type IX collagen 
COL4A5                0.008   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.008   type IV collagen alpha 5 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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