Guide to the Human Genome
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Name: FAM83G Sequence: fasta or formatted (823aa) NCBI GI: 115392150
Description:

hypothetical protein LOC644815

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         62           2
 C cysteine            0.6          5           1
 D aspartate           6.6         54           4
 E glutamate           7.2         59           3
 F phenylalanine       2.8         23           2
 G glycine             7.7         63           2
 H histidine           2.8         23           3
 I isoleucine          3.5         29           2
 K lysine              4.9         40           2
 L leucine             7.3         60           2
 M methionine          2.1         17           1
 N asparagine          2.3         19           1
 P proline            10.4         86           3
 Q glutamine           5.5         45           2
 R arginine            7.2         59           3
 S serine              8.5         70           2
 T threonine           3.2         26           1
 V valine              6.7         55           2
 W tryptophan          1.3         11           1
 Y tyrosine            2.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC644815 
FAM83F                0.157   hypothetical protein LOC113828 
FAM83E                0.113   hypothetical protein LOC54854 
FAM83B                0.100   hypothetical protein LOC222584 
FAM83D                0.097   hypothetical protein LOC81610 
FAM83H                0.093   FAM83H 
FAM83C                0.092   hypothetical protein LOC128876 
FAM83A                0.080   hypothetical protein LOC84985 isoform b 
FAM83A                0.080   hypothetical protein LOC84985 isoform a 
HTT                   0.016   huntingtin 
BAT2                  0.014   HLA-B associated transcript-2 
SHANK3                0.013   SH3 and multiple ankyrin repeat domains 3 
SRRM2                 0.013   splicing coactivator subunit SRm300 
SHC1                  0.013   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.013   SHC (Src homology 2 domain containing) transforming...
MLL2                  0.012   myeloid/lymphoid or mixed-lineage leukemia 2 
SHC1                  0.012   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.012   SHC (Src homology 2 domain containing) transforming ...
ZC3H18                0.012   zinc finger CCCH-type containing 18 
IGSF9B                0.011   immunoglobulin superfamily, member 9B 
ANKRD33B              0.011   PREDICTED: ankyrin repeat domain 33B 
PRR12                 0.011   proline rich 12 
PRB2                  0.010   proline-rich protein BstNI subfamily 2 
SRRM1                 0.010   serine/arginine repetitive matrix 1 
TTN                   0.010   titin isoform N2-A 
LOC645321             0.010   PREDICTED: hypothetical protein 
LOC645321             0.010   PREDICTED: hypothetical protein 
DACT3                 0.010   thymus expressed gene 3-like 
VASP                  0.010   vasodilator-stimulated phosphoprotein 
C2orf55               0.010   hypothetical protein LOC343990 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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