REXO1 4035

Name: REXO1	Sequence: fasta or formatted (1221aa)		NCBI GI: 145199237
Description: transcription elongation factor B polypeptide 3 binding protein 1		Referenced in: RNA Polymerase and General Transcription Factors RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 115 3 C cysteine 1.9 23 2 D aspartate 5.5 67 1 E glutamate 7.0 85 2 F phenylalanine 2.0 24 2 G glycine 8.5 104 6 H histidine 1.8 22 1 I isoleucine 2.3 28 2 K lysine 6.5 79 4 L leucine 7.8 95 2 M methionine 0.7 8 1 N asparagine 1.8 22 1 P proline 10.0 122 3 Q glutamine 3.4 41 2 R arginine 8.2 100 2 S serine 10.2 125 9 T threonine 5.1 62 4 V valine 5.1 62 2 W tryptophan 0.4 5 1 Y tyrosine 2.6 32 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription elongation factor B polypeptide 3 bin... LOC100288562 0.273 PREDICTED: hypothetical protein XP_002342903 LOC100288527 0.273 PREDICTED: hypothetical protein XP_002342902 LOC100288500 0.273 PREDICTED: hypothetical protein XP_002342901 LOC100288470 0.273 PREDICTED: hypothetical protein XP_002342900 LOC100289448 0.273 PREDICTED: hypothetical protein XP_002342913, parti... REXO1L1 0.273 exonuclease GOR LOC81691 0.035 exonuclease NEF-sp isoform 2 LOC81691 0.035 exonuclease NEF-sp isoform 1 NACA 0.023 nascent polypeptide-associated complex alpha subuni... NOLC1 0.020 nucleolar and coiled-body phosphoprotein 1 AEN 0.020 interferon stimulated exonuclease gene 20kDa-like 1... APC2 0.020 adenomatosis polyposis coli 2 ISG20 0.019 interferon stimulated exonuclease ABL1 0.018 c-abl oncogene 1, receptor tyrosine kinase isoform a... ABL1 0.018 c-abl oncogene 1, receptor tyrosine kinase isoform b... TNRC18 0.018 trinucleotide repeat containing 18 NEFH 0.018 neurofilament, heavy polypeptide 200kDa ISG20L2 0.018 interferon stimulated exonuclease gene 20kDa-like 2 ... TCOF1 0.017 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.017 Treacher Collins-Franceschetti syndrome 1 isoform a ... SRRM2 0.017 splicing coactivator subunit SRm300 SRRM1 0.017 serine/arginine repetitive matrix 1 MLLT1 0.016 myeloid/lymphoid or mixed-lineage leukemia (trithora... FLJ37078 0.016 hypothetical protein LOC222183 TCOF1 0.016 Treacher Collins-Franceschetti syndrome 1 isoform d... FLJ22184 0.016 PREDICTED: hypothetical protein LOC80164 TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform c ... MAP7D1 0.015 MAP7 domain containing 1 TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform f... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.