SOHLH1 5854

Name: SOHLH1	Sequence: fasta or formatted (387aa)		NCBI GI: 156119603
Description: spermatogenesis and oogenesis specific basic helix-loop-helix 1 isoform a		Referenced in: Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [328aa] spermatogenesis and oogenesis specific basic helix-loop-helix 1 i...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 36 2 C cysteine 2.8 11 2 D aspartate 5.2 20 2 E glutamate 7.2 28 1 F phenylalanine 2.6 10 2 G glycine 9.8 38 2 H histidine 0.8 3 1 I isoleucine 1.6 6 1 K lysine 2.1 8 1 L leucine 11.6 45 2 M methionine 2.1 8 1 N asparagine 0.5 2 1 P proline 11.4 44 2 Q glutamine 4.7 18 3 R arginine 5.2 20 2 S serine 13.2 51 2 T threonine 2.8 11 1 V valine 4.7 18 1 W tryptophan 2.3 9 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spermatogenesis and oogenesis specific basic helix-... SOHLH1 0.807 spermatogenesis and oogenesis specific basic helix-... SOHLH2 0.030 spermatogenesis and oogenesis specific basic helix-... COL15A1 0.030 alpha 1 type XV collagen precursor COL10A1 0.020 type X collagen alpha 1 precursor KRTAP4-9 0.018 PREDICTED: keratin associated protein 4-9 DOT1L 0.018 DOT1-like, histone H3 methyltransferase VPS37C 0.018 vacuolar protein sorting 37C TFAP4 0.017 transcription factor AP-4 (activating enhancer bindin... COL5A2 0.017 alpha 2 type V collagen preproprotein LAT 0.017 linker for activation of T cells isoform c COL4A1 0.016 alpha 1 type IV collagen preproprotein SNX26 0.016 sorting nexin 26 SCRT1 0.016 scratch COL3A1 0.014 collagen type III alpha 1 preproprotein COL7A1 0.014 alpha 1 type VII collagen precursor NACA 0.014 nascent polypeptide-associated complex alpha subuni... KIAA0284 0.014 hypothetical protein LOC283638 isoform 2 KIAA0284 0.014 hypothetical protein LOC283638 isoform 1 FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.013 PREDICTED: hypothetical protein LOC80164 C16orf42 0.013 hypothetical protein LOC115939 LAT 0.013 linker for activation of T cells isoform a ZNF828 0.013 zinc finger protein 828 MARCH11 0.013 membrane-associated ring finger (C3HC4) 11 TCFL5 0.013 transcription factor-like 5 protein MUC16 0.013 mucin 16 GLTSCR1 0.013 glioma tumor suppressor candidate region gene 1 [Ho... KRTAP4-6 0.012 PREDICTED: keratin associated protein 4.6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.