Guide to the Human Genome
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Name: KRTAP4-9 Sequence: fasta or formatted (254aa) NCBI GI: 239745807
Description:

PREDICTED: keratin associated protein 4-9

Referenced in:

Keratins

Other entries for this name:
alt prot [210aa] keratin associated protein 4-9
alt prot [210aa] PREDICTED: keratin associated protein 4-9 isoform 1
alt prot [195aa] PREDICTED: keratin associated protein 4-9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            33.5         85           4
 C cysteine            2.4          6           1
 D aspartate           0.8          2           1
 E glutamate           1.6          4           1
 F phenylalanine       1.6          4           1
 G glycine             2.4          6           1
 H histidine           1.2          3           2
 I isoleucine          1.6          4           1
 K lysine              0.8          2           1
 L leucine             5.9         15           1
 M methionine          2.0          5           1
 N asparagine          1.6          4           1
 P proline            18.5         47           2
 Q glutamine           1.2          3           1
 R arginine            3.9         10           2
 S serine              7.9         20           2
 T threonine           3.9         10           1
 V valine              8.3         21           2
 W tryptophan          0.4          1           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: keratin associated protein 4-9 
KRTAP4-6              0.527   PREDICTED: keratin associated protein 4.6 
KIAA0754              0.119   hypothetical protein LOC643314 
AMOT                  0.115   angiomotin isoform 2 
AMOT                  0.115   angiomotin isoform 1 
FLJ22184              0.110   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.106   PREDICTED: hypothetical protein FLJ22184 
TAF4                  0.106   TBP-associated factor 4 
C4orf40               0.106   hypothetical protein LOC401137 
FLJ22184              0.104   PREDICTED: hypothetical protein FLJ22184 
TMPRSS13              0.104   transmembrane protease, serine 13 
BAT2D1                0.102   HBxAg transactivated protein 2 
FAM48B1               0.100   hypothetical protein LOC100130302 
SRCAP                 0.093   Snf2-related CBP activator protein 
BCORL1                0.089   BCL6 co-repressor-like 1 
NACA                  0.085   nascent polypeptide-associated complex alpha subuni...
FOXD1                 0.083   forkhead box D1 
SAMD1                 0.081   sterile alpha motif domain containing 1 
WNK2                  0.081   WNK lysine deficient protein kinase 2 
MUC7                  0.079   mucin 7, secreted precursor 
MUC7                  0.079   mucin 7, secreted precursor 
MUC7                  0.079   mucin 7, secreted precursor 
COL6A3                0.079   alpha 3 type VI collagen isoform 5 precursor 
COL6A3                0.079   alpha 3 type VI collagen isoform 1 precursor 
COL6A3                0.079   alpha 3 type VI collagen isoform 4 precursor 
HOXA13                0.076   homeobox A13 
TSC22D2               0.076   TSC22 domain family, member 2 
PCLO                  0.076   piccolo isoform 2 
PCLO                  0.076   piccolo isoform 1 
LOC100291479          0.074   PREDICTED: hypothetical protein XP_002348186 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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