LAT 35707

Name: LAT	Sequence: fasta or formatted (262aa)		NCBI GI: 7657293
Description: linker for activation of T cells isoform a		Referenced in: B cells T cells
Other entries for this name: alt prot [269aa] linker for activation of T cells isoform d alt prot [233aa] linker for activation of T cells isoform b alt prot [232aa] linker for activation of T cells isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 26 2 C cysteine 1.5 4 1 D aspartate 6.1 16 2 E glutamate 8.8 23 3 F phenylalanine 0.8 2 1 G glycine 6.9 18 2 H histidine 2.3 6 1 I isoleucine 2.7 7 1 K lysine 0.8 2 1 L leucine 9.5 25 4 M methionine 1.5 4 1 N asparagine 2.7 7 1 P proline 12.6 33 2 Q glutamine 2.7 7 1 R arginine 4.2 11 2 S serine 11.8 31 2 T threonine 4.2 11 1 V valine 5.7 15 2 W tryptophan 1.5 4 1 Y tyrosine 3.8 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 linker for activation of T cells isoform a LAT 0.845 linker for activation of T cells isoform d LAT 0.845 linker for activation of T cells isoform b LAT 0.833 linker for activation of T cells isoform c NOLC1 0.029 nucleolar and coiled-body phosphoprotein 1 PSD4 0.029 pleckstrin and Sec7 domain containing 4 FRMPD1 0.027 FERM and PDZ domain containing 1 TCOF1 0.027 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.027 Treacher Collins-Franceschetti syndrome 1 isoform e... TNRC18 0.023 trinucleotide repeat containing 18 SOHLH1 0.023 spermatogenesis and oogenesis specific basic helix-... TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.021 Treacher Collins-Franceschetti syndrome 1 isoform a ... MARCH9 0.019 membrane-associated RING-CH protein IX POLR2A 0.019 DNA-directed RNA polymerase II A CNTNAP1 0.019 contactin associated protein 1 precursor MLL2 0.019 myeloid/lymphoid or mixed-lineage leukemia 2 C9orf75 0.019 hypothetical protein LOC286262 isoform 2 C9orf75 0.019 hypothetical protein LOC286262 isoform 1 SOHLH1 0.019 spermatogenesis and oogenesis specific basic helix-... LOC100292934 0.019 PREDICTED: hypothetical protein PPP1R13L 0.017 protein phosphatase 1, regulatory subunit 13 like [... PPP1R13L 0.017 protein phosphatase 1, regulatory subunit 13 like [H... MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... LOC100291479 0.017 PREDICTED: hypothetical protein XP_002348186 LOC100133714 0.017 PREDICTED: similar to Mucin-12, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.