Guide to the Human Genome
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Name: KIAA0284 Sequence: fasta or formatted (1554aa) NCBI GI: 163644261
Description:

hypothetical protein LOC283638 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {1484aa} hypothetical protein LOC283638 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7        151           2
 C cysteine            0.6         10           2
 D aspartate           6.1         95           3
 E glutamate           7.6        118           3
 F phenylalanine       2.3         36           2
 G glycine             7.8        121           4
 H histidine           2.0         31           2
 I isoleucine          2.3         36           1
 K lysine              3.7         57           2
 L leucine             7.4        115           2
 M methionine          1.4         22           1
 N asparagine          2.1         32           1
 P proline            11.2        174           3
 Q glutamine           4.9         76           2
 R arginine            9.2        143           3
 S serine             10.6        165           3
 T threonine           5.1         80           3
 V valine              4.3         67           2
 W tryptophan          0.6         10           2
 Y tyrosine            1.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC283638 isoform 1 
KIAA0284              0.954   hypothetical protein LOC283638 isoform 2 
CEP170                0.205   centrosomal protein 170kDa isoform alpha 
CEP170                0.104   centrosomal protein 170kDa isoform beta 
CEP170                0.104   centrosomal protein 170kDa isoform gamma 
SRRM2                 0.016   splicing coactivator subunit SRm300 
ANKRD11               0.014   ankyrin repeat domain 11 
TCOF1                 0.013   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.013   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform e...
APC2                  0.012   adenomatosis polyposis coli 2 
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform a ...
SYNPO2L               0.012   synaptopodin 2-like isoform a 
SRRM1                 0.012   serine/arginine repetitive matrix 1 
COL22A1               0.011   collagen, type XXII, alpha 1 
SYNPO2L               0.011   synaptopodin 2-like isoform b 
SCAF1                 0.010   SR-related CTD-associated factor 1 
SNIP1                 0.010   Smad nuclear interacting protein 
ARID1B                0.010   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
CASKIN1               0.010   CASK interacting protein 1 
FLJ22184              0.010   PREDICTED: hypothetical protein LOC80164 
PRB2                  0.010   proline-rich protein BstNI subfamily 2 
ARID1B                0.010   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
MAPT                  0.010   microtubule-associated protein tau isoform 6 
LBXCOR1               0.010   LBXCOR1 homolog 
COL1A1                0.010   alpha 1 type I collagen preproprotein 
SPEG                  0.010   SPEG complex locus 
KNDC1                 0.010   kinase non-catalytic C-lobe domain (KIND) containin...
LOC100293055          0.009   PREDICTED: similar to COL22A1 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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