| Name: C16orf42 | Sequence: fasta or formatted (312aa) | NCBI GI: 47777330 | |
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Description: hypothetical protein LOC115939
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 12.2 38 2 C cysteine 3.2 10 2 D aspartate 5.4 17 2 E glutamate 8.0 25 3 F phenylalanine 3.5 11 1 G glycine 11.2 35 2 H histidine 1.3 4 1 I isoleucine 1.6 5 1 K lysine 3.5 11 2 L leucine 9.6 30 2 M methionine 1.0 3 1 N asparagine 1.9 6 1 P proline 7.7 24 1 Q glutamine 3.5 11 1 R arginine 9.6 30 3 S serine 5.8 18 3 T threonine 2.6 8 1 V valine 5.4 17 1 W tryptophan 1.3 4 1 Y tyrosine 1.6 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC115939 LOC100292618 0.016 PREDICTED: hypothetical protein LOC100290170 0.016 PREDICTED: hypothetical protein XP_002347382 LOC100289646 0.016 PREDICTED: hypothetical protein XP_002343220 SOHLH1 0.016 spermatogenesis and oogenesis specific basic helix-... IRX1 0.016 iroquois homeobox protein 1 APC2 0.016 adenomatosis polyposis coli 2 MARCKS 0.015 myristoylated alanine-rich protein kinase C substra... C1orf173 0.013 hypothetical protein LOC127254 AP3B2 0.013 adaptor-related protein complex 3, beta 2 subunit [H... C14orf4 0.013 chromosome 14 open reading frame 4 PKD2 0.011 polycystin 2 ARHGEF10 0.011 Rho guanine nucleotide exchange factor 10 LOC100290951 0.011 PREDICTED: hypothetical protein XP_002346501 COL4A2 0.010 alpha 2 type IV collagen preproprotein RNF19B 0.010 ring finger protein 19B isoform a RNF19B 0.010 ring finger protein 19B isoform b TBC1D12 0.010 TBC1 domain family, member 12 ZFPM1 0.010 zinc finger protein, multitype 1 DONSON 0.010 downstream neighbor of SON FBXL19 0.010 F-box and leucine-rich repeat protein 19 GRIN2A 0.008 N-methyl-D-aspartate receptor subunit 2A isoform 2 ... GRIN2A 0.008 N-methyl-D-aspartate receptor subunit 2A isoform 1 ... GRIN2A 0.008 N-methyl-D-aspartate receptor subunit 2A isoform 1 pr... LOC100127946 0.008 PREDICTED: hypothetical protein BAT2L 0.008 HLA-B associated transcript 2-like NES 0.008 nestin MLLT1 0.008 myeloid/lymphoid or mixed-lineage leukemia (trithora... LOC100292370 0.008 PREDICTED: hypothetical protein LOC100131851 0.008 PREDICTED: hypothetical proteinHuman BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
