Guide to the Human Genome
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Name: TFAP4 Sequence: fasta or formatted (338aa) NCBI GI: 4507447
Description:

transcription factor AP-4 (activating enhancer binding protein 4)

Referenced in:

Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         18           2
 C cysteine            0.6          2           1
 D aspartate           4.4         15           1
 E glutamate          11.5         39           3
 F phenylalanine       1.5          5           1
 G glycine             3.3         11           2
 H histidine           2.7          9           2
 I isoleucine          5.9         20           1
 K lysine              5.0         17           1
 L leucine             8.6         29           2
 M methionine          2.7          9           2
 N asparagine          2.4          8           1
 P proline             7.4         25           5
 Q glutamine          10.7         36           4
 R arginine            8.3         28           3
 S serine              8.0         27           2
 T threonine           5.3         18           1
 V valine              5.3         18           2
 W tryptophan          0.3          1           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription factor AP-4 (activating enhancer bindin... 
MNT                   0.047   MAX binding protein 
ZNF853                0.044   zinc finger protein 853 
MLXIPL                0.042   Williams Beuren syndrome chromosome region 14 isofor...
MAP4K4                0.041   mitogen-activated protein kinase kinase kinase kinas...
LOC283685             0.039   PREDICTED: golgi autoantigen, golgin subfamily a-li...
NF2                   0.039   neurofibromin 2 isoform 7 
NF2                   0.039   neurofibromin 2 isoform 2 
NF2                   0.039   neurofibromin 2 isoform 2 
NF2                   0.039   neurofibromin 2 isoform 7 
NF2                   0.039   neurofibromin 2 isoform 6 
NF2                   0.039   neurofibromin 2 isoform 5 
NF2                   0.039   neurofibromin 2 isoform 2 
MLXIPL                0.039   Williams Beuren syndrome chromosome region 14 isofor...
NF2                   0.039   neurofibromin 2 isoform 1 
TCHH                  0.039   trichohyalin 
LOC100133758          0.038   PREDICTED: hypothetical protein, partial 
TWIST2                0.038   twist homolog 2 
PLEC1                 0.038   plectin 1 isoform 11 
PLEC1                 0.038   plectin 1 isoform 10 
PLEC1                 0.038   plectin 1 isoform 8 
PLEC1                 0.038   plectin 1 isoform 7 
PLEC1                 0.038   plectin 1 isoform 6 
PLEC1                 0.038   plectin 1 isoform 3 
PLEC1                 0.038   plectin 1 isoform 2 
PLEC1                 0.038   plectin 1 isoform 1 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.034   GRB10 interacting GYF protein 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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