SOHLH1 5853

Name: SOHLH1	Sequence: fasta or formatted (328aa)		NCBI GI: 156119601
Description: spermatogenesis and oogenesis specific basic helix-loop-helix 1 isoform b		Referenced in: Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [387aa] spermatogenesis and oogenesis specific basic helix-loop-helix 1 i...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 32 2 C cysteine 2.7 9 2 D aspartate 4.0 13 2 E glutamate 6.4 21 1 F phenylalanine 2.1 7 1 G glycine 9.5 31 2 H histidine 0.9 3 1 I isoleucine 1.5 5 1 K lysine 2.1 7 1 L leucine 11.0 36 2 M methionine 2.4 8 1 N asparagine 0.6 2 1 P proline 11.9 39 2 Q glutamine 4.9 16 3 R arginine 6.1 20 2 S serine 13.4 44 2 T threonine 3.4 11 1 V valine 4.6 15 1 W tryptophan 2.4 8 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spermatogenesis and oogenesis specific basic helix-... SOHLH1 0.957 spermatogenesis and oogenesis specific basic helix-... SOHLH2 0.036 spermatogenesis and oogenesis specific basic helix-... COL15A1 0.023 alpha 1 type XV collagen precursor LAT 0.022 linker for activation of T cells isoform c TFAP4 0.020 transcription factor AP-4 (activating enhancer bindin... LAT 0.019 linker for activation of T cells isoform a ZNF828 0.015 zinc finger protein 828 TAF4 0.015 TBP-associated factor 4 TCFL5 0.015 transcription factor-like 5 protein COL5A2 0.015 alpha 2 type V collagen preproprotein MUC16 0.015 mucin 16 KRTAP4-9 0.015 PREDICTED: keratin associated protein 4-9 SYN1 0.015 synapsin I isoform Ia SYN1 0.015 synapsin I isoform Ib GLTSCR1 0.015 glioma tumor suppressor candidate region gene 1 [Ho... LAT 0.014 linker for activation of T cells isoform d LAT 0.014 linker for activation of T cells isoform b LOC147710 0.014 PREDICTED: hypothetical protein LOC147710 LOC147710 0.014 PREDICTED: hypothetical protein LOC147710 LOC147710 0.014 PREDICTED: hypothetical protein LOC147710 HDGF2 0.014 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.014 hepatoma-derived growth factor-related protein 2 iso... SYVN1 0.012 synoviolin 1 isoform a FLJ22184 0.012 PREDICTED: hypothetical protein FLJ22184 KRTAP4-6 0.012 PREDICTED: keratin associated protein 4.6 FLJ22184 0.012 PREDICTED: hypothetical protein LOC80164 TAGAP 0.012 T-cell activation Rho GTPase-activating protein isof... TAGAP 0.012 T-cell activation Rho GTPase-activating protein isof... ZC3H3 0.012 zinc finger CCCH-type containing 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.