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Search of human proteins with 156071476
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156071476 hypothetical protein LOC401137 [Homo sapiens]
(219 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156071476 hypothetical protein LOC401137 [Homo sapiens] 458 e-129
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 77 1e-14
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 75 6e-14
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s... 68 7e-12
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s... 68 7e-12
gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo ... 68 7e-12
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 64 8e-11
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 64 1e-10
gi|19111150 angiomotin isoform 2 [Homo sapiens] 62 5e-10
gi|166064029 angiomotin isoform 1 [Homo sapiens] 62 5e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 61 6e-10
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 60 1e-09
gi|150170670 piccolo isoform 2 [Homo sapiens] 59 3e-09
gi|150378539 piccolo isoform 1 [Homo sapiens] 59 3e-09
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 4e-09
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 59 4e-09
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 57 9e-09
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 57 9e-09
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 55 5e-08
gi|18079216 CASK interacting protein 1 [Homo sapiens] 53 2e-07
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 53 2e-07
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 53 2e-07
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 53 2e-07
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 52 3e-07
gi|154146199 sal-like 3 [Homo sapiens] 52 4e-07
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 52 5e-07
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 51 7e-07
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 51 7e-07
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 51 7e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 51 9e-07
>gi|156071476 hypothetical protein LOC401137 [Homo sapiens]
Length = 219
Score = 458 bits (1178), Expect = e-129
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MKLLLWACIVCVAFARKRRFPFIGEDDNDDGHPLHPSLNIPYGIRNLPPPLYYRPVNTVP 60
MKLLLWACIVCVAFARKRRFPFIGEDDNDDGHPLHPSLNIPYGIRNLPPPLYYRPVNTVP
Sbjct: 1 MKLLLWACIVCVAFARKRRFPFIGEDDNDDGHPLHPSLNIPYGIRNLPPPLYYRPVNTVP 60
Query: 61 SYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSA 120
SYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSA
Sbjct: 61 SYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSA 120
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAA 180
AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAA
Sbjct: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAA 180
Query: 181 EAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ 219
EAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ
Sbjct: 181 EAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ 219
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 77.0 bits (188), Expect = 1e-14
Identities = 56/124 (45%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 91 RGFPLATQLNVPPLPPRGFPFVPPSRFFSA-----AAAPAAP-PIAAEPAAAAPLTATPV 144
RG N+ PL P P V PS A AAAPAA P AA P AAAP P
Sbjct: 64 RGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAAGPPAAAPAAVCPA 123
Query: 145 AAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPA 204
AA+P+A + AA P A P A PAA P AA P A A V PAA +PS A A P
Sbjct: 124 AADPSAASLCAASPPAAVP-AAVPAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPL 182
Query: 205 APEP 208
A P
Sbjct: 183 AAVP 186
Score = 72.4 bits (176), Expect = 3e-13
Identities = 42/96 (43%), Positives = 51/96 (53%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
PP+ AAA A P AA+P+AA+ A+P+AA PAA +P A PAA P A P+A +
Sbjct: 151 PPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAAS 210
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
AA A P PAA P PA A AA P
Sbjct: 211 LCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAP 246
Score = 71.6 bits (174), Expect = 5e-13
Identities = 42/93 (45%), Positives = 48/93 (51%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
PP+ +A AA P AA AA+PL A P AA PAA AP A P A P A A +
Sbjct: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAAS 215
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
AA PAA +P P A P+ A A A PAA
Sbjct: 216 QPAAVPAAASPAAAAPLAVNPAAAARAAAAPAA 248
Score = 70.5 bits (171), Expect = 1e-12
Identities = 56/135 (41%), Positives = 61/135 (45%), Gaps = 21/135 (15%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAA-------PPIA---AEPAAAAPLTATP 143
P A V P P G P P+ AAA P+A PP A A PAA P A P
Sbjct: 98 PAAAPAAVRP-PAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGP 156
Query: 144 VAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAE------ 197
AA AA P AA+P+A + A P A P AA PAA AP V P A PS A
Sbjct: 157 PAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQ 216
Query: 198 ----PATAKPAAPEP 208
PA A PAA P
Sbjct: 217 PAAVPAAASPAAAAP 231
Score = 69.7 bits (169), Expect = 2e-12
Identities = 48/106 (45%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 114 PSRFFSAAAAP-AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
PS AA+P AA P AA PAA AP P AA P+A + AA A P A PAA A
Sbjct: 171 PSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAA 230
Query: 173 PVAAEPAAEAPVGVEPAAE-----EPSPAEP-ATAKPAAPEPHPSP 212
P+A PAA A PAA SPA P A A+P + P P P
Sbjct: 231 PLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVP 276
Score = 68.6 bits (166), Expect = 4e-12
Identities = 43/104 (41%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 105 PPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPV 164
PP P P+ A PAA P AA AA P A P AA A +P+AA PAA +P
Sbjct: 137 PPAAVPAAVPA----AVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPA 192
Query: 165 GAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
PAA P AA P+A + A P+ A PA A P A P
Sbjct: 193 AVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNP 236
Score = 60.1 bits (144), Expect = 1e-09
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAA--EPAAEAPVGAEPAA 170
P + AA+ PAA P AA PAAAAPL P AA AA AP AA + AE+P A P A
Sbjct: 206 PSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESP--ATPLA 263
Query: 171 EAPVAAEPAAEAPVGVEPAAEE 192
A + P A P V P A E
Sbjct: 264 IAQPVSFPPAPVPCAVPPLAAE 285
Score = 55.5 bits (132), Expect = 4e-08
Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 114 PSRFFSAAAAP-AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
P+ AA P AA P AA AA+ A P AA PAA AP+A PAA A A PAA
Sbjct: 191 PAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAAC 250
Query: 173 PVAAEPAAEAPVGV-EPAAEEPSPAEPATAKPAAPE 207
+ + P+ + +P + P+P P P A E
Sbjct: 251 VQSVAESPATPLAIAQPVSFPPAPV-PCAVPPLAAE 285
Score = 45.1 bits (105), Expect = 5e-05
Identities = 33/78 (42%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 138 PLT--ATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSP 195
PLT + PV A VA PAA PAA P AA P A AP V PAA +PS
Sbjct: 76 PLTPWSAPVVVPSALTRAVAWRPAAA------PAAVRPPAAGPPAAAPAAVCPAAADPSA 129
Query: 196 AEPATAKPAAPEPHPSPS 213
A A P A P P+
Sbjct: 130 ASLCAASPPAAVPAAVPA 147
Score = 37.7 bits (86), Expect = 0.008
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 110 PFVPPSRFFSAAAAP-AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEP 168
P P+ AAAAP A P AA AAAAP A + + P+A P P
Sbjct: 217 PAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAPVP 276
Query: 169 AAEAPVAAE 177
A P+AAE
Sbjct: 277 CAVPPLAAE 285
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 74.7 bits (182), Expect = 6e-14
Identities = 47/102 (46%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEP 178
+A PAA AA PAA AP P AA P+A + AA P A AP A PAA AP+A P
Sbjct: 102 AAVRRPAATLGAASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAASPAAAAPLAVNP 161
Query: 179 AAEAPVG--VEPAAEEPSP----AEPATAKPAAPEPHPSPSL 214
AA AP V+ AE P+ A+P ++ PAAP P P L
Sbjct: 162 AAAAPAAACVQSVAESPATPLAIAQPVSS-PAAPAPCAVPPL 202
Score = 70.9 bits (172), Expect = 8e-13
Identities = 53/127 (41%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 102 PPL--PPRGFPFV--PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAE 157
PP+ PP P V P + SAA+ AA P+A PAA AT AA PAA AP A
Sbjct: 66 PPVAGPPATAPAVVCPAAAGPSAASLRAANPLAVAPAAVRRPAATLGAASPAAVAPAAVC 125
Query: 158 PAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATA-------KPAAP---- 206
PAA +P A A +P AA PAA +P P A P+ A PA A PA P
Sbjct: 126 PAAASPSAASLCAASPTAAAPAAASPAAAAPLAVNPAAAAPAAACVQSVAESPATPLAIA 185
Query: 207 EPHPSPS 213
+P SP+
Sbjct: 186 QPVSSPA 192
Score = 69.3 bits (168), Expect = 2e-12
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAP 173
P+ AA+ A P A PAAA+P A+ AA P A AP AA PAA AP+ PAA AP
Sbjct: 107 PAATLGAASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAASPAAAAPLAVNPAAAAP 166
Query: 174 VAA--EPAAEA---PVGVEPAAEEPSPAEPATAKPAAPEP 208
AA + AE+ P+ + P+ P P A EP
Sbjct: 167 AAACVQSVAESPATPLAIAQPVSSPAAPAPCAVPPLAAEP 206
Score = 67.4 bits (163), Expect = 9e-12
Identities = 52/142 (36%), Positives = 60/142 (42%), Gaps = 29/142 (20%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAA-----------------PPIAAEPAAA 136
P A V P P G P P+ + AAA P+A PP+A P A
Sbjct: 17 PAAAPAAVRP-PAAGPPAAAPAVVYPAAAGPSAASLCAANPLVPAPAAVRPPVAG-PPAT 74
Query: 137 APLTATPVAAEPAAGAPVAAEPAAEAPV----------GAEPAAEAPVAAEPAAEAPVGV 186
AP P AA P+A + AA P A AP A PAA AP A PAA +P
Sbjct: 75 APAVVCPAAAGPSAASLRAANPLAVAPAAVRRPAATLGAASPAAVAPAAVCPAAASPSAA 134
Query: 187 EPAAEEPSPAEPATAKPAAPEP 208
A P+ A PA A PAA P
Sbjct: 135 SLCAASPTAAAPAAASPAAAAP 156
Score = 65.9 bits (159), Expect = 3e-11
Identities = 45/103 (43%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP 153
P AT P P + SAA+ AA P AA PAAA+P A P+A PAA AP
Sbjct: 107 PAATLGAASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAASPAAAAPLAVNPAAAAP 166
Query: 154 VAA--EPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPS 194
AA + AE+P A P A A + PAA AP V P A EP+
Sbjct: 167 AAACVQSVAESP--ATPLAIAQPVSSPAAPAPCAVPPLAAEPT 207
Score = 65.5 bits (158), Expect = 3e-11
Identities = 46/123 (37%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 87 VYHIRGFPLATQLNVP-PLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVA 145
VY P A L PL P PP A A P AA P+AA+ A P+A
Sbjct: 39 VYPAAAGPSAASLCAANPLVPAPAAVRPPVAGPPATAPAVVCPAAAGPSAASLRAANPLA 98
Query: 146 AEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
PAA AA A +P PAA P AA P+A + P A P+ A PA A P A
Sbjct: 99 VAPAAVRRPAATLGAASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAASPAAAAPLA 158
Query: 206 PEP 208
P
Sbjct: 159 VNP 161
Score = 65.1 bits (157), Expect = 4e-11
Identities = 43/99 (43%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 116 RFFSAAAA------PAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPA 169
+F + AAA PAA P A P AA P A P PAA P AA A P+ PA
Sbjct: 3 KFSTRAAAKTSVRRPAAAPAAVRPPAAGPPAAAPAVVYPAAAGPSAASLCAANPLVPAPA 62
Query: 170 AEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
A P A P A AP V PAA PS A A P A P
Sbjct: 63 AVRPPVAGPPATAPAVVCPAAAGPSAASLRAANPLAVAP 101
Score = 64.3 bits (155), Expect = 8e-11
Identities = 45/113 (39%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAP-PIAAEPAAAAPLTATPVAAEPAAGA 152
PLA P P+ AA PAA P AA AA+P A P AA PAA A
Sbjct: 96 PLAVAPAAVRRPAATLGAASPAAVAPAAVCPAAASPSAASLCAASPTAAAPAAASPAAAA 155
Query: 153 PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
P+A PAA AP A + A A P A A PAA P P A+P A
Sbjct: 156 PLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSPAAPAPCAVPPLAAEPTA 208
Score = 50.4 bits (119), Expect = 1e-06
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 114 PSRFFSAAAAPAAP-PIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
P+ AAA+PAA P+A PAAAAP A + + P+A +P P A
Sbjct: 141 PTAAAPAAASPAAAAPLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSPAAPAPCAVP 200
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPAT 200
P+AAEP A A + P P+ +P+T
Sbjct: 201 PLAAEPTALAYL---PLHHWPTDVDPST 225
Score = 47.4 bits (111), Expect = 1e-05
Identities = 34/89 (38%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 134 AAAAPLTATPVAAEPAAGAPVAAEPAAEA----PVGAEPAAEAPVAAEPAAEAPVGVEPA 189
AAA P AA A P A PAA P A P+A + AA P AP V P
Sbjct: 8 AAAKTSVRRPAAAPAAVRPPAAGPPAAAPAVVYPAAAGPSAASLCAANPLVPAPAAVRPP 67
Query: 190 AEEPSPAEPATAKPAAPEPHPSPSLEQAN 218
P PA PAA P + SL AN
Sbjct: 68 VAGPPATAPAVVCPAAAGP-SAASLRAAN 95
Score = 38.9 bits (89), Expect = 0.003
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 141 ATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEP-SPAEPA 199
+T AA+ + P AA A P PAA AP PAA P A P PA A
Sbjct: 5 STRAAAKTSVRRPAAAPAAVRPPAAGPPAA-APAVVYPAAAGPSAASLCAANPLVPAPAA 63
Query: 200 TAKPAAPEPHPSPSL 214
P A P +P++
Sbjct: 64 VRPPVAGPPATAPAV 78
>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
sapiens]
Length = 2971
Score = 67.8 bits (164), Expect = 7e-12
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 124 PAAPPIAAEPAAAAPLTATPVAAEPA-AGAPVAAEPAAEA-PVGAEPAAEAPVAAEPAAE 181
P+ P AA+PA A P+ A PVA + A PVA +PA A PV A+PAA P AA AA
Sbjct: 2697 PSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAA--AAA 2754
Query: 182 APVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLE 215
PV +P P A+PA KPA +P S E
Sbjct: 2755 KPVATKPEVPRPQAAKPAATKPATTKPMVKMSRE 2788
Score = 50.8 bits (120), Expect = 9e-07
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 55 PVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVP- 113
P N S N T T + +T+ P + + Q +V P + P P
Sbjct: 2653 PNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPV 2712
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAA-PLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
++ + A PP+A +PA AA P+ A P A P A A AA+P A P P A
Sbjct: 2713 AAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAA--AAKPVATKPEVPRPQAAK 2770
Query: 173 PVAAEPAAEAPV 184
P A +PA P+
Sbjct: 2771 PAATKPATTKPM 2782
>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
sapiens]
Length = 3177
Score = 67.8 bits (164), Expect = 7e-12
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 124 PAAPPIAAEPAAAAPLTATPVAAEPA-AGAPVAAEPAAEA-PVGAEPAAEAPVAAEPAAE 181
P+ P AA+PA A P+ A PVA + A PVA +PA A PV A+PAA P AA AA
Sbjct: 2903 PSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAA--AAA 2960
Query: 182 APVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLE 215
PV +P P A+PA KPA +P S E
Sbjct: 2961 KPVATKPEVPRPQAAKPAATKPATTKPMVKMSRE 2994
Score = 50.8 bits (120), Expect = 9e-07
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 55 PVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVP- 113
P N S N T T + +T+ P + + Q +V P + P P
Sbjct: 2859 PNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPV 2918
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAA-PLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
++ + A PP+A +PA AA P+ A P A P A A AA+P A P P A
Sbjct: 2919 AAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAA--AAKPVATKPEVPRPQAAK 2976
Query: 173 PVAAEPAAEAPV 184
P A +PA P+
Sbjct: 2977 PAATKPATTKPM 2988
>gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo
sapiens]
Length = 2570
Score = 67.8 bits (164), Expect = 7e-12
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 124 PAAPPIAAEPAAAAPLTATPVAAEPA-AGAPVAAEPAAEA-PVGAEPAAEAPVAAEPAAE 181
P+ P AA+PA A P+ A PVA + A PVA +PA A PV A+PAA P AA AA
Sbjct: 2296 PSVKPAAAKPAPAKPVAAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAA--AAA 2353
Query: 182 APVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLE 215
PV +P P A+PA KPA +P S E
Sbjct: 2354 KPVATKPEVPRPQAAKPAATKPATTKPMVKMSRE 2387
Score = 50.8 bits (120), Expect = 9e-07
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 55 PVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVP- 113
P N S N T T + +T+ P + + Q +V P + P P
Sbjct: 2252 PNNVTSSPTSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPV 2311
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAA-PLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
++ + A PP+A +PA AA P+ A P A P A A AA+P A P P A
Sbjct: 2312 AAKPVATKMATVRPPVAVKPATAAKPVAAKPAAVRPPAAA--AAKPVATKPEVPRPQAAK 2369
Query: 173 PVAAEPAAEAPV 184
P A +PA P+
Sbjct: 2370 PAATKPATTKPM 2381
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 64.3 bits (155), Expect = 8e-11
Identities = 47/121 (38%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAE 161
PP PRG P +AAAA A PP A P AP+ A A P A A A P +
Sbjct: 111 PPRAPRGAP--------AAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Query: 162 APVGAEPAAE--APVAA-EPAAEAPVGVEPAA---EEPSPAEPATAKPAAPEPHPSPSLE 215
P P A+ AP+AA PA AP V P A P PA A P P P P +
Sbjct: 163 GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQ 222
Query: 216 Q 216
Q
Sbjct: 223 Q 223
Score = 62.8 bits (151), Expect = 2e-10
Identities = 53/128 (41%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 91 RGFPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAA 150
RG P A PP P P PP+ AAAAPA P AA AA AP + P P A
Sbjct: 116 RGAPAAAAAAAPPPTPAPPP--PPAPV--AAAAPARAPRAAAAAATAPPSPGPAQPGPRA 171
Query: 151 --GAPVAAEPAAEA--PVGAEPAA--EAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPA 204
AP+AA P A A P A PA AP A A E P+ P +P PA P +P
Sbjct: 172 QRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPL---PPPPQP-PAPPQQQQPP 227
Query: 205 APEPHPSP 212
P+P P P
Sbjct: 228 PPQPQPPP 235
Score = 62.0 bits (149), Expect = 4e-10
Identities = 46/108 (42%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 113 PPSRFFSAAAAPAAPPIAAE--PAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAA 170
PP R A P APP A PAAAA P A P APVAA A AP A AA
Sbjct: 101 PPRR----GATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAA 156
Query: 171 EAPVA---AEPAAEAPVGVEPAAEEPSP-AEPATAKPAAPEPHPSPSL 214
AP + A+P A AA P+P A PA A PA P P P++
Sbjct: 157 TAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAV 204
Score = 41.2 bits (95), Expect = 7e-04
Identities = 31/78 (39%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 141 ATPVAAEPAA-GAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPA 199
ATP A A GAP AA AA P A P APVAA A AP + A A
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAP---------RAAAAAA 156
Query: 200 TAKPAAPEPHPSPSLEQA 217
TA P+ P P ++A
Sbjct: 157 TAPPSPGPAQPGPRAQRA 174
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 63.5 bits (153), Expect = 1e-10
Identities = 65/202 (32%), Positives = 77/202 (38%), Gaps = 18/202 (8%)
Query: 23 IGEDDNDDGHPLHPSLNI-------PYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSY 75
I E+D P+ P+ + +R P P VP+ T +P+
Sbjct: 964 ITEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPT- 1022
Query: 76 PWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVP-PSRFFSAAAAPAAPPIAAEPA 134
P TSP A + P P VP P S AAA P PA
Sbjct: 1023 PEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPA 1082
Query: 135 AAAPLTATPVAAEPAAGAPVAAEP---AAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAE 191
AA P P + PAA P EP AA P EPA+ P AA P E P PAA
Sbjct: 1083 AAVPTPEEPTS--PAAAVPTPEEPTSPAAAVPTPEEPAS--PAAAVPTPEEP--ASPAAA 1136
Query: 192 EPSPAEPATAKPAAPEPHPSPS 213
P+P EPA PA P P S S
Sbjct: 1137 VPTPEEPAFPAPAVPTPEESAS 1158
Score = 57.4 bits (137), Expect = 9e-09
Identities = 47/122 (38%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 96 ATQLNVPPLPPRGFPFVP-PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPV 154
A + P P VP P S AAA P PAAA P P + PAA P
Sbjct: 1056 AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS--PAAAVPT 1113
Query: 155 AAEPAAEA---PVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPS 211
EPA+ A P EPA+ P AA P E P PA P+P E A+A A P P S
Sbjct: 1114 PEEPASPAAAVPTPEEPAS--PAAAVPTPEEPAFPAPAV--PTPEESASAAVAVPTPEES 1169
Query: 212 PS 213
S
Sbjct: 1170 AS 1171
Score = 54.7 bits (130), Expect = 6e-08
Identities = 57/183 (31%), Positives = 66/183 (36%), Gaps = 26/183 (14%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
P P+ +P PP P VP+ T +P+ P TSP
Sbjct: 1026 PTSPAAAVP------PPEEPTSPAAAVPTPEEPTSPAAAVPT-PEEPTSP---------- 1068
Query: 93 FPLATQLNVPPLPPRGFPFVP-PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAG 151
A + P P VP P S AAA P PAAA P P A PAA
Sbjct: 1069 ---AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP--ASPAAA 1123
Query: 152 APVAAEPAAEAPVGAEPAAEAPVAAEPAAEAP-VGVEPAAEEPSPAEPATAKPAAPEPHP 210
P EPA +P A P E P PA P A P+P E A+ A P P
Sbjct: 1124 VPTPEEPA--SPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAE 1181
Query: 211 SPS 213
S S
Sbjct: 1182 SAS 1184
Score = 50.4 bits (119), Expect = 1e-06
Identities = 44/128 (34%), Positives = 50/128 (39%), Gaps = 16/128 (12%)
Query: 96 ATQLNVPPLPPRGFPFVP-PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVA--------- 145
A + P P P VP P SAA A P +A PAAA P A +
Sbjct: 1134 AAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLE 1193
Query: 146 --AEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKP 203
PAA P A A PAA P + EPA+ A P EEP+ PA A P
Sbjct: 1194 EPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNP--EEPT--SPAAAVP 1249
Query: 204 AAPEPHPS 211
EP S
Sbjct: 1250 TLEEPTSS 1257
Score = 47.8 bits (112), Expect = 7e-06
Identities = 45/134 (33%), Positives = 51/134 (38%), Gaps = 21/134 (15%)
Query: 96 ATQLNVPPLPPRGFPFVP-PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPV 154
A + P P VP P S AAA P A PAAA P P PA P
Sbjct: 1095 AAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPE 1154
Query: 155 AAEPAAEA----PVGAEPAAEAPVAAEPAAEAPV------GVEPAAEEPSPA-------- 196
+ AA A A PAA P AE A+ A V PAA P+PA
Sbjct: 1155 ESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEE 1214
Query: 197 --EPATAKPAAPEP 208
PA + P + EP
Sbjct: 1215 FTSPAASVPTSEEP 1228
Score = 47.8 bits (112), Expect = 7e-06
Identities = 43/134 (32%), Positives = 53/134 (39%), Gaps = 30/134 (22%)
Query: 105 PPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAA-----EPAAGAPVAAEPA 159
P P S F+A A P + PAA+ P A VA PAA P + EPA
Sbjct: 1172 PAAAVPTPAESASFAAVVATLEEPTS--PAASVPTPAAMVATLEEFTSPAASVPTSEEPA 1229
Query: 160 AEAPVGAEP------AAEAPVAAEPAAEAPVGV------EPAAEEPSPAEPAT------- 200
+ A + P AA P EP + A + PAA P+P EPA+
Sbjct: 1230 SLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSN 1289
Query: 201 ----AKPAAPEPHP 210
A PAA P P
Sbjct: 1290 LEEPASPAAAVPTP 1303
Score = 47.8 bits (112), Expect = 7e-06
Identities = 36/98 (36%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP-VAAEPAAEAPVGAEPAAEAPVA-- 175
S AAA + P PAAA P P ++ A P + PAA P EPA+ A
Sbjct: 1230 SLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSN 1289
Query: 176 ----AEPAAEAP---VGVEPAAEEPSPAEPATAKPAAP 206
A PAA P V PAA P+P PA A P
Sbjct: 1290 LEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAAVP 1327
Score = 40.0 bits (92), Expect = 0.002
Identities = 33/78 (42%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP---VAAEPAAEAPVGAEPAA 170
P S AA+ P A PAAA P A PAA P VAA PAA P PA
Sbjct: 1264 PEELSSPAASVPTPEEPASPAAAVSNLEEP--ASPAAAVPTPEVAAIPAASVPTPEVPA- 1320
Query: 171 EAPVAAEPAAE--APVGV 186
P AA P E +P+GV
Sbjct: 1321 -IPAAAVPPMEEVSPIGV 1337
Score = 39.3 bits (90), Expect = 0.003
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA-PVAAE 177
S+AAA P + PAA+ P P A PAA EPA+ A P A P A+
Sbjct: 1256 SSAAAVLTPEELSSPAASVPTPEEP--ASPAAAVSNLEEPASPAAAVPTPEVAAIPAASV 1313
Query: 178 PAAEA---PVGVEPAAEEPSP 195
P E P P EE SP
Sbjct: 1314 PTPEVPAIPAAAVPPMEEVSP 1334
Score = 36.2 bits (82), Expect = 0.022
Identities = 37/124 (29%), Positives = 46/124 (37%), Gaps = 31/124 (25%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAA------EPAAGA--------------PVAAEP 158
+AA A + P PA AA +T ++A E AA A PV
Sbjct: 920 TAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGPVTPAT 979
Query: 159 AAEAPVGAEPAA---------EAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
AP + AA +P AA P E P PAA P+P EP + A P P
Sbjct: 980 TVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEP--TSPAAAVPTPEEPTSPAAAVPPPE 1037
Query: 210 PSPS 213
S
Sbjct: 1038 EPTS 1041
Score = 34.3 bits (77), Expect = 0.085
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAE----PAAEAPVGAEPAAEAPVAA 176
A PA E AA ++P PA A + E A +P A A P+
Sbjct: 907 ATVPAVTVSVPEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITE 966
Query: 177 EPAA-EAPVGVEPAAEEPSPAEPATA--KPAAPEPHPSPS 213
E E P V PA +P EP TA + + PE SP+
Sbjct: 967 EDGTPEGP--VTPATTVHAPEEPDTAAVRVSTPEEPASPA 1004
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 61.6 bits (148), Expect = 5e-10
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTA--TPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAA 176
+AAAAP+ AA AA +P A P AA A+ A VA AA A V PAA APV A
Sbjct: 513 AAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPA 572
Query: 177 EPAAEAPVGVEPAAEEPSPAEPATAKPA---APEPHPSPSLEQA 217
P A P+ + T+ PA P P P+P++ QA
Sbjct: 573 PALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQA 616
Score = 55.5 bits (132), Expect = 4e-08
Identities = 44/100 (44%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA----PVAA 176
A AA AA A AA +T T VAA P A A AA AA AP A AA A P AA
Sbjct: 476 APVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAA 535
Query: 177 EPAAEAPVGVEPAAEEPSPAEPATAK--PAAPEPHPSPSL 214
A AA PS A A + PAAP P P+P+L
Sbjct: 536 GQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL 575
Score = 51.2 bits (121), Expect = 7e-07
Identities = 34/92 (36%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAA 180
AAA A A P+AAA A V PAA APV A P A A AP +
Sbjct: 540 AAASVASAAAVAPSAAA---AAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPT 596
Query: 181 EAPVGVEPAAEEPSPAEPATAKPAAPEPHPSP 212
AP A P+PA PA+P P P
Sbjct: 597 SAPAVAPTPAPTPTPAVAQAEVPASPATGPGP 628
Score = 49.3 bits (116), Expect = 3e-06
Identities = 39/105 (37%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAG-----APVAAEPAAEAPVGAEPAAEAP 173
+AA A I AAAP+ A AA PAA A AA AA +P A A
Sbjct: 484 AAAITATAATITTTMVAAAPV-AVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAA 542
Query: 174 VAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQAN 218
A AA AP AA + +PA PA A P P+P+ QA+
Sbjct: 543 SVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQAS 587
Score = 44.7 bits (104), Expect = 6e-05
Identities = 34/116 (29%), Positives = 40/116 (34%), Gaps = 6/116 (5%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP 153
P + P +P + ++AAA A AA AP PV A P
Sbjct: 520 PATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVP 579
Query: 154 VAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
A A AP + AP A A P AE PA PAT P PH
Sbjct: 580 APAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAE--VPASPAT----GPGPH 629
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 61.6 bits (148), Expect = 5e-10
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTA--TPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAA 176
+AAAAP+ AA AA +P A P AA A+ A VA AA A V PAA APV A
Sbjct: 922 AAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPA 981
Query: 177 EPAAEAPVGVEPAAEEPSPAEPATAKPA---APEPHPSPSLEQA 217
P A P+ + T+ PA P P P+P++ QA
Sbjct: 982 PALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQA 1025
Score = 55.5 bits (132), Expect = 4e-08
Identities = 44/100 (44%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA----PVAA 176
A AA AA A AA +T T VAA P A A AA AA AP A AA A P AA
Sbjct: 885 APVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAA 944
Query: 177 EPAAEAPVGVEPAAEEPSPAEPATAK--PAAPEPHPSPSL 214
A AA PS A A + PAAP P P+P+L
Sbjct: 945 GQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL 984
Score = 51.2 bits (121), Expect = 7e-07
Identities = 34/92 (36%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAA 180
AAA A A P+AAA A V PAA APV A P A A AP +
Sbjct: 949 AAASVASAAAVAPSAAA---AAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPT 1005
Query: 181 EAPVGVEPAAEEPSPAEPATAKPAAPEPHPSP 212
AP A P+PA PA+P P P
Sbjct: 1006 SAPAVAPTPAPTPTPAVAQAEVPASPATGPGP 1037
Score = 49.3 bits (116), Expect = 3e-06
Identities = 39/105 (37%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAG-----APVAAEPAAEAPVGAEPAAEAP 173
+AA A I AAAP+ A AA PAA A AA AA +P A A
Sbjct: 893 AAAITATAATITTTMVAAAPV-AVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAA 951
Query: 174 VAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQAN 218
A AA AP AA + +PA PA A P P+P+ QA+
Sbjct: 952 SVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQAS 996
Score = 44.7 bits (104), Expect = 6e-05
Identities = 34/116 (29%), Positives = 40/116 (34%), Gaps = 6/116 (5%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP 153
P + P +P + ++AAA A AA AP PV A P
Sbjct: 929 PATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVP 988
Query: 154 VAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
A A AP + AP A A P AE PA PAT P PH
Sbjct: 989 APAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAE--VPASPAT----GPGPH 1038
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 61.2 bits (147), Expect = 6e-10
Identities = 57/181 (31%), Positives = 66/181 (36%), Gaps = 27/181 (14%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
P+ PS P PPPL P+ PS P + P P P P +
Sbjct: 715 PMSPSATPP---PQAPPPLAAPPLQVPPSPPASP------PMSPSATPPPRVPPLL---- 761
Query: 93 FPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGA 152
A L VPP PP P P A P APP A P PL A P P A
Sbjct: 762 --AAPPLQVPPSPPASLPMSP-----LAKPPPQAPPALATP----PLQALP---SPPASF 807
Query: 153 PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSP 212
P A + A + P A P A P AP+ P + SP A +P P P S
Sbjct: 808 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 867
Query: 213 S 213
S
Sbjct: 868 S 868
Score = 60.8 bits (146), Expect = 8e-10
Identities = 60/193 (31%), Positives = 73/193 (37%), Gaps = 33/193 (17%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
P+ PS P PP L P+ PS P + P P P P
Sbjct: 684 PVSPSATPP---SQAPPSLAAPPLQVPPSPPASP------PMSPSATPPPQAPP------ 728
Query: 93 FPLATQ-LNVPPLPPRGFPFVPPSRFFSAAAAP------AAPPIAAEPAAAAPLTATPVA 145
PLA L VPP PP P P SA P AAPP+ P+ A L +P+A
Sbjct: 729 -PLAAPPLQVPPSPPASPPMSP-----SATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782
Query: 146 AEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKP-- 203
P P A P +A P A P A + A + + P A P A P A P
Sbjct: 783 KPPPQAPPALATPPLQAL--PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL 840
Query: 204 -AAPEPHPSPSLE 215
P P SP+L+
Sbjct: 841 QVPPSPPASPTLQ 853
Score = 60.5 bits (145), Expect = 1e-09
Identities = 56/182 (30%), Positives = 69/182 (37%), Gaps = 21/182 (11%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
PL P P PP L P+ PS P + P P SP P +
Sbjct: 610 PLSPLATPP---PQAPPXLALPPLQAPPSPPASP------PLSPLATPSPQAPNALAVH- 659
Query: 93 FPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAP-LTATPVAAEPAAG 151
L + PP PP PF PP A+P P A P+ A P L A P+ P+
Sbjct: 660 -LLQAPFSPPPSPPVQAPFSPP-------ASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 711
Query: 152 APVAAEPAAEAPVGA-EPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHP 210
A P+A P A P A P+ P+ A + P+A P P A P P P
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP-P 770
Query: 211 SP 212
SP
Sbjct: 771 SP 772
Score = 48.5 bits (114), Expect = 4e-06
Identities = 58/185 (31%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 36 PSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPL 95
P P ++ P PL P T S T P P L SP + PL
Sbjct: 561 PPCPAPCPLQAPPSPLTTPPPETPSSIA------TPPPQAPPALASPPLQGLPSPPLSPL 614
Query: 96 ATQL-NVPP---LPPRGFPFVPPSRFFSAAAAPAAPPIAAEP-AAAAPLTATPVAAEPAA 150
AT PP LPP P PP+ S +P A P P A A L P + P+
Sbjct: 615 ATPPPQAPPXLALPPLQAPPSPPA---SPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 671
Query: 151 GAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSP-AEPATAKPAAPEPH 209
P A PV P+A P A P+ AP P PSP A P + A P P
Sbjct: 672 PVQAPFSPPASPPVS--PSATPPSQAPPSLAAP----PLQVPPSPPASPPMSPSATPPPQ 725
Query: 210 PSPSL 214
P L
Sbjct: 726 APPPL 730
Score = 42.7 bits (99), Expect = 2e-04
Identities = 53/184 (28%), Positives = 68/184 (36%), Gaps = 29/184 (15%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
P+ PS P +PP L P+ PS P + LP P P P
Sbjct: 746 PMSPSATPP---PRVPPLLAAPPLQVPPSPPAS------LPMSPLAKPPPQAPPA----- 791
Query: 93 FPLATQ-LNVPPLPPRGFPFVPPSRFFSAAAAP----AAPPIAAEPAAAAPLTATPVA-- 145
LAT L P PP FP P F +A+ P A PP A P AAPL P +
Sbjct: 792 --LATPPLQALPSPPASFPGQAP--FSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP 847
Query: 146 AEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAA--EEPSPAEPATAKP 203
A P AP P P + +A P P P++ P A +++
Sbjct: 848 ASPTLQAP--RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 905
Query: 204 AAPE 207
+ PE
Sbjct: 906 STPE 909
Score = 39.7 bits (91), Expect = 0.002
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 27/174 (15%)
Query: 58 TVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPF-VPPSR 116
T PS P +T D+ P L+ P P PL T L+ P + P P + P +
Sbjct: 442 TSPSRPASTPPDS--PPLQAPLSLPASP--------PLQTSLS-PAVSPLSSPLTIHPLQ 490
Query: 117 FFSAAAA--PAAP-------PIAAEPAAAAPLTATPVAA---EPAAGAPVAAEP---AAE 161
S+ A+ P AP P+ + + A P TP A+ P P A P A
Sbjct: 491 ALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTAS 550
Query: 162 APVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLE 215
AP+ P A +AP +P+ AT P AP SP L+
Sbjct: 551 APLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQ 604
Score = 38.5 bits (88), Expect = 0.005
Identities = 58/215 (26%), Positives = 71/215 (33%), Gaps = 56/215 (26%)
Query: 48 PPPLYYRPVNTVPS----YPGNT--YTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNV 101
PP L P+ +PS +PG LP P P P V A L V
Sbjct: 789 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL------AAPLLQV 842
Query: 102 PPLPPRG----FPFVPPS----------RFFSAAAAPAAPPIAAEPAA----------AA 137
PP PP P PP+ R A A PP + P++ ++
Sbjct: 843 PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS 902
Query: 138 PLTATPVAAE---------PAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEP 188
T+TP AA P AE AA P P+A A AP+ P
Sbjct: 903 SATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPP 962
Query: 189 AAE-----------EPSPAEPATAKPAAPEPHPSP 212
A E E AT P A +P PSP
Sbjct: 963 ATGPGSADGLCTIYETEGPESATPAPGALDPGPSP 997
Score = 37.0 bits (84), Expect = 0.013
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEP------AAGAPVAAEPAAEAPVGA 166
P SR S++A P + P + P+A A ++P A P P +A
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Query: 167 EPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSP 212
P + +P+A + P + + PAT P+ P P P
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLP 342
Score = 35.0 bits (79), Expect = 0.050
Identities = 42/177 (23%), Positives = 59/177 (33%), Gaps = 39/177 (22%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
P HPS P G++ L PP P P + +
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPP------------------------RKDAAPALGPLSS 301
Query: 93 FPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGA 152
PLAT P + P PP AA P + P A PL P P+ A
Sbjct: 302 SPLATP---SPSGTKARPVPPPDN----AATPLPATLPPSPPLATPLPLAP----PSPSA 350
Query: 153 PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVE--PAAEEP-SPAEPATAKPAAP 206
P + + +P P+ P P +AP ++ P + P S P+ P +P
Sbjct: 351 PPSLQ-TLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSP 406
Score = 33.1 bits (74), Expect = 0.19
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 126 APPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVG 185
A P+ AA PL AT + P A A P+ AP + P A P ++AP
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPP--ATPPSQAPPS 371
Query: 186 VEPAAEEPSPAEPATAKPAAPEPHPSPSLE 215
+ + P+ P SPSL+
Sbjct: 372 MTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ 401
Score = 31.6 bits (70), Expect = 0.55
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVA-AEPAAEAPVGAEPAAEAPVAAE 177
SA P + ++A PL++ + A G P A A P+ P G + A P
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ-ALRPPQVTP 287
Query: 178 PAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHP 210
P +A + P + P + A P P P
Sbjct: 288 PRKDAAPALGPLSSSPLATPSPSGTKARPVPPP 320
Score = 31.6 bits (70), Expect = 0.55
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 123 APAAPPIAAEPAAAAPLT-----ATPVAAEPAAGAPVAAEPAAEAPVGAEP-----AAEA 172
A A+PP AE AA P A P+A A GAP+ PA P A+ E
Sbjct: 922 AAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPAT-GPGSADGLCTIYETEG 980
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
P +A PA P A +P P+ + AA
Sbjct: 981 PESATPA--------PGALDPGPSPGTSGGKAA 1005
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 60.5 bits (145), Expect = 1e-09
Identities = 34/84 (40%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 122 AAPAAPPIA-AEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAA 180
A+PA P A A PA A+P P A PA +P A PA P A PA +P P
Sbjct: 9 ASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR 68
Query: 181 EAPVGVEPAAEEPSPAEPATAKPA 204
+P PA P+ A PA A PA
Sbjct: 69 ASPGRASPAQASPAQASPARASPA 92
Score = 59.7 bits (143), Expect = 2e-09
Identities = 29/83 (34%), Positives = 35/83 (42%)
Query: 126 APPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVG 185
A P A A+P A+P P +P A PA +P G P +P A PA P
Sbjct: 9 ASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR 68
Query: 186 VEPAAEEPSPAEPATAKPAAPEP 208
P P+ A PA A PA P
Sbjct: 69 ASPGRASPAQASPAQASPARASP 91
Score = 58.5 bits (140), Expect = 4e-09
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAP 173
P+R SA A+PA A PA P A+P A PA +P P +P A PA P
Sbjct: 11 PARTPSAGASPAQ----ASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPP 66
Query: 174 VAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQAN 218
A P +P PA P+ A PA A + S S A+
Sbjct: 67 GRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSAS 111
Score = 52.0 bits (123), Expect = 4e-07
Identities = 33/101 (32%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 113 PPSRFFSAAAAPAA-PPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAE 171
PP R A A+PA PP A P A+P A+P A PA +P A + + + A
Sbjct: 50 PPGRASPAQASPAGTPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARS 109
Query: 172 APVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSP 212
A V P V P P + PA + PA SP
Sbjct: 110 ASVTTSPTRVYLVRATPVGAVPIRSSPARSAPATRATRESP 150
Score = 40.0 bits (92), Expect = 0.002
Identities = 19/57 (33%), Positives = 23/57 (40%)
Query: 156 AEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSP 212
A PA GA PA +P P +P PA P+ P A PA P +P
Sbjct: 9 ASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTP 65
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 58.9 bits (141), Expect = 3e-09
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 110 PFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPA 169
P PPS+ PA PP +P A P P +A+P + P + +P + P A+P+
Sbjct: 466 PTKPPSQL----PGPAKPP-PQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPS 520
Query: 170 AEAPVAAEPAAEAPVGVEPAAEEPSPAEPA------------TAKPAAPEPHPSPSLEQ 216
+ P + +P ++ P +P+A++PSPA+P+ + KP P P SPS +Q
Sbjct: 521 PQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQP-PTVSPSAKQ 578
Score = 56.6 bits (135), Expect = 2e-08
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 48 PPPLYYRPVNTVPSY-PGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPP 106
P PL +P P+ PG T T P PG + Q P PP
Sbjct: 418 PKPLAQQPGLQSPAKAPGPTKTPVQQPG-------PGKIPAQQAGPGKTSAQQTGPTKPP 470
Query: 107 RGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGA 166
P P++ PA PP +P +A P + P + +P P A+P+ + P
Sbjct: 471 SQLP--GPAKPPPQQPGPAKPP-PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGST 527
Query: 167 EPAAEAPVAAEPAAEAPVGVEPAAEEPS----------PAEPATAKPAAPEPHPSPSL 214
+P ++ P +A+P+A+ P +P+A++ + P +P T P+A +P PS L
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQP-PSQGL 584
Score = 54.3 bits (129), Expect = 8e-08
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAP 173
P + + P PP + P A P P A+P P +A+P ++ P +P + P
Sbjct: 456 PGKTSAQQTGPTKPP-SQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQP 514
Query: 174 VAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ 219
A+P+ + P +P +++P A+P+ +P+ +P S + +Q
Sbjct: 515 GPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ 560
Score = 46.2 bits (108), Expect = 2e-05
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 90 IRGFPLATQLNVPPLPP--RGFPFVPPSR---FFSAAAAPAAPPIA----AEPAAAAPLT 140
+RG + L P PP + P PP++ + PA PP +P A P T
Sbjct: 289 VRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGT 348
Query: 141 ATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEA---PVGV-EPAAEEPSPA 196
P P P A P + +E P + +P +A P GV + A++P PA
Sbjct: 349 VKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Query: 197 EPATAKPAAPEP 208
+P T + P+P
Sbjct: 409 KPPTQQVGTPKP 420
Score = 42.4 bits (98), Expect = 3e-04
Identities = 50/206 (24%), Positives = 74/206 (35%), Gaps = 31/206 (15%)
Query: 31 GHPLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGL---PSYPWILTSPGFPYV 87
G + PSL P + PP P PG+ + G P+ P LT P
Sbjct: 291 GESVKPSLPSP----SKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 88 YHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSAAA---------APAAPPIAAEPAAAAP 138
++ PP P G P PP++ + A A PP + A P
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLG-PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQP 405
Query: 139 LTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAE-----PAAEAPVG-------- 185
A P + P+A +P ++P A + PV PA +A G
Sbjct: 406 GPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTG 465
Query: 186 -VEPAAEEPSPAEPATAKPAAPEPHP 210
+P ++ P PA+P +P +P P
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPP 491
Score = 41.6 bits (96), Expect = 5e-04
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPP--IAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
P LP P PP + + PA P ++P A P +P A P +P
Sbjct: 296 PSLPS---PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP 352
Query: 160 AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSP----AEPATAKPAAPEPHPS 211
+ P +P A+ A+P A+ +P++E+P P P K A +P P+
Sbjct: 353 VQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Score = 37.4 bits (85), Expect = 0.010
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA-- 159
PP P G P ++ P PP +P A A P A + + P + +P
Sbjct: 331 PPAQPSGLT-KPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK 389
Query: 160 --AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATA--KPAAPEPHPSPSLE 215
A+ P + A+ P A+P + +P A++P PA A P P P
Sbjct: 390 ALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKI 449
Query: 216 QANQ 219
A Q
Sbjct: 450 PAQQ 453
Score = 33.1 bits (74), Expect = 0.19
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 143 PVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAK 202
P ++P P +P A+ P G E + P A+P A+ +P A++P +P
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQP-GHEKSQPGP--AKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Query: 203 PAAPEPHPSP 212
P +P P
Sbjct: 356 PGTTKPPAQP 365
Score = 32.3 bits (72), Expect = 0.32
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 157 EPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSL 214
+PA++ P G+ + P P + ++ +A+ P P P P P P P P L
Sbjct: 2371 KPASQLPSGSPSVSSLPAKPRPFFRSS-SLDISAQPPPPPPPPPPPPPPPPPPPPPPL 2427
Score = 30.8 bits (68), Expect = 0.94
Identities = 28/105 (26%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 111 FVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEP--AAGAPVAA-----EPAAEAP 163
F S S A P ++ AP+ P ++P + G P + PA P
Sbjct: 939 FSQASNLISTAGQPGPH---SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIP 995
Query: 164 VGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
V E A A EP AE V+ E P +K EP
Sbjct: 996 VKKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEP 1040
Score = 30.0 bits (66), Expect = 1.6
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 146 AEPAAGAPVAAEPAAEAPVGAE--PAAEAPVAAEPAAEAPVGVE---PAAE--EPSPAEP 198
++ GAP+ PA P ++ P + PA PV E PAAE EP +
Sbjct: 956 SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQA 1015
Query: 199 ATAKPAAPEPHPSP 212
T K E P P
Sbjct: 1016 PTVKRTETEKKPPP 1029
Score = 30.0 bits (66), Expect = 1.6
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 17/128 (13%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTAT--PVAAEP-AAGAPVAAE- 157
PP+PP+ +P F+ P+ PPIA +P T T P P G + +
Sbjct: 2484 PPVPPKPSS-IPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSM 2542
Query: 158 ------------PAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
P+ +P+ +P ++ E V + +E +P + + ++
Sbjct: 2543 TLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAIT 2602
Query: 206 PEPHPSPS 213
P SPS
Sbjct: 2603 SWPLGSPS 2610
Score = 29.6 bits (65), Expect = 2.1
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 11/120 (9%)
Query: 103 PLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEA 162
P PP+ P VP + AP A +P P T V++ A P P+++
Sbjct: 732 PAPPKE-PSVPSEQ----DKAPVADDKPKQPKMVKPTTDL-VSSSSATTKPDI--PSSKV 783
Query: 163 PVGAEPAAEAPV---AAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ 219
AE P+ +A+P+ P E + S A P A + HP PS E Q
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQ 843
Score = 29.3 bits (64), Expect = 2.7
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 147 EPAAGAPVAAEPAAEAPVGAEP---AAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKP 203
+PA+ P + + P P ++ ++A+P P P P P P P
Sbjct: 2371 KPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPP 2430
Query: 204 AAPEP 208
+P+P
Sbjct: 2431 TSPKP 2435
Score = 28.5 bits (62), Expect = 4.7
Identities = 30/120 (25%), Positives = 37/120 (30%), Gaps = 12/120 (10%)
Query: 100 NVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
+V LP + PF S +A P PP P P P P + P
Sbjct: 2382 SVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTI---- 2437
Query: 160 AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPAT------AKPAAPEPHPSPS 213
P A A P +A +E A S P T P P+P PS
Sbjct: 2438 --LPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPS 2495
Score = 28.1 bits (61), Expect = 6.1
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 12/97 (12%)
Query: 128 PIAAEPAA---AAPLTATPVAA----EPAAGAPVA-AEPAAEAPVGAEPAAEAPVAAEPA 179
P+ + P AP+T T + +P +P A P + EP P+ +P
Sbjct: 652 PVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT 711
Query: 180 AEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQ 216
P+A+ P E + AP PS EQ
Sbjct: 712 LHG----SPSAKAKQPPEADSLSKPAPPKEPSVPSEQ 744
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 58.9 bits (141), Expect = 3e-09
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 110 PFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPA 169
P PPS+ PA PP +P A P P +A+P + P + +P + P A+P+
Sbjct: 466 PTKPPSQL----PGPAKPP-PQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPS 520
Query: 170 AEAPVAAEPAAEAPVGVEPAAEEPSPAEPA------------TAKPAAPEPHPSPSLEQ 216
+ P + +P ++ P +P+A++PSPA+P+ + KP P P SPS +Q
Sbjct: 521 PQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQP-PTVSPSAKQ 578
Score = 56.6 bits (135), Expect = 2e-08
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 48 PPPLYYRPVNTVPSY-PGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPP 106
P PL +P P+ PG T T P PG + Q P PP
Sbjct: 418 PKPLAQQPGLQSPAKAPGPTKTPVQQPG-------PGKIPAQQAGPGKTSAQQTGPTKPP 470
Query: 107 RGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGA 166
P P++ PA PP +P +A P + P + +P P A+P+ + P
Sbjct: 471 SQLP--GPAKPPPQQPGPAKPP-PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGST 527
Query: 167 EPAAEAPVAAEPAAEAPVGVEPAAEEPS----------PAEPATAKPAAPEPHPSPSL 214
+P ++ P +A+P+A+ P +P+A++ + P +P T P+A +P PS L
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQP-PSQGL 584
Score = 54.3 bits (129), Expect = 8e-08
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAP 173
P + + P PP + P A P P A+P P +A+P ++ P +P + P
Sbjct: 456 PGKTSAQQTGPTKPP-SQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQP 514
Query: 174 VAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ 219
A+P+ + P +P +++P A+P+ +P+ +P S + +Q
Sbjct: 515 GPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ 560
Score = 46.2 bits (108), Expect = 2e-05
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 90 IRGFPLATQLNVPPLPP--RGFPFVPPSR---FFSAAAAPAAPPIA----AEPAAAAPLT 140
+RG + L P PP + P PP++ + PA PP +P A P T
Sbjct: 289 VRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGT 348
Query: 141 ATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEA---PVGV-EPAAEEPSPA 196
P P P A P + +E P + +P +A P GV + A++P PA
Sbjct: 349 VKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Query: 197 EPATAKPAAPEP 208
+P T + P+P
Sbjct: 409 KPPTQQVGTPKP 420
Score = 42.4 bits (98), Expect = 3e-04
Identities = 50/206 (24%), Positives = 74/206 (35%), Gaps = 31/206 (15%)
Query: 31 GHPLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGL---PSYPWILTSPGFPYV 87
G + PSL P + PP P PG+ + G P+ P LT P
Sbjct: 291 GESVKPSLPSP----SKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 88 YHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSAAA---------APAAPPIAAEPAAAAP 138
++ PP P G P PP++ + A A PP + A P
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLG-PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQP 405
Query: 139 LTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAE-----PAAEAPVG-------- 185
A P + P+A +P ++P A + PV PA +A G
Sbjct: 406 GPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTG 465
Query: 186 -VEPAAEEPSPAEPATAKPAAPEPHP 210
+P ++ P PA+P +P +P P
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPP 491
Score = 41.6 bits (96), Expect = 5e-04
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPP--IAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
P LP P PP + + PA P ++P A P +P A P +P
Sbjct: 296 PSLPS---PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP 352
Query: 160 AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSP----AEPATAKPAAPEPHPS 211
+ P +P A+ A+P A+ +P++E+P P P K A +P P+
Sbjct: 353 VQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Score = 37.4 bits (85), Expect = 0.010
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA-- 159
PP P G P ++ P PP +P A A P A + + P + +P
Sbjct: 331 PPAQPSGLT-KPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK 389
Query: 160 --AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATA--KPAAPEPHPSPSLE 215
A+ P + A+ P A+P + +P A++P PA A P P P
Sbjct: 390 ALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKI 449
Query: 216 QANQ 219
A Q
Sbjct: 450 PAQQ 453
Score = 33.1 bits (74), Expect = 0.19
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 143 PVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAK 202
P ++P P +P A+ P G E + P A+P A+ +P A++P +P
Sbjct: 299 PSPSKPPIQQPTPGKPPAQQP-GHEKSQPGP--AKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Query: 203 PAAPEPHPSP 212
P +P P
Sbjct: 356 PGTTKPPAQP 365
Score = 32.3 bits (72), Expect = 0.32
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 157 EPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSL 214
+PA++ P G+ + P P + ++ +A+ P P P P P P P P L
Sbjct: 2371 KPASQLPSGSPSVSSLPAKPRPFFRSS-SLDISAQPPPPPPPPPPPPPPPPPPPPPPL 2427
Score = 30.8 bits (68), Expect = 0.94
Identities = 28/105 (26%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 111 FVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEP--AAGAPVAA-----EPAAEAP 163
F S S A P ++ AP+ P ++P + G P + PA P
Sbjct: 939 FSQASNLISTAGQPGPH---SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIP 995
Query: 164 VGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
V E A A EP AE V+ E P +K EP
Sbjct: 996 VKKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEP 1040
Score = 30.0 bits (66), Expect = 1.6
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 146 AEPAAGAPVAAEPAAEAPVGAE--PAAEAPVAAEPAAEAPVGVE---PAAE--EPSPAEP 198
++ GAP+ PA P ++ P + PA PV E PAAE EP +
Sbjct: 956 SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQA 1015
Query: 199 ATAKPAAPEPHPSP 212
T K E P P
Sbjct: 1016 PTVKRTETEKKPPP 1029
Score = 30.0 bits (66), Expect = 1.6
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 17/128 (13%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTAT--PVAAEP-AAGAPVAAE- 157
PP+PP+ +P F+ P+ PPIA +P T T P P G + +
Sbjct: 2484 PPVPPKPSS-IPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSM 2542
Query: 158 ------------PAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
P+ +P+ +P ++ E V + +E +P + + ++
Sbjct: 2543 TLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAIT 2602
Query: 206 PEPHPSPS 213
P SPS
Sbjct: 2603 SWPLGSPS 2610
Score = 29.6 bits (65), Expect = 2.1
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 11/120 (9%)
Query: 103 PLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEA 162
P PP+ P VP + AP A +P P T V++ A P P+++
Sbjct: 732 PAPPKE-PSVPSEQ----DKAPVADDKPKQPKMVKPTTDL-VSSSSATTKPDI--PSSKV 783
Query: 163 PVGAEPAAEAPV---AAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ 219
AE P+ +A+P+ P E + S A P A + HP PS E Q
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQ 843
Score = 29.3 bits (64), Expect = 2.7
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 147 EPAAGAPVAAEPAAEAPVGAEP---AAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKP 203
+PA+ P + + P P ++ ++A+P P P P P P P
Sbjct: 2371 KPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPP 2430
Query: 204 AAPEP 208
+P+P
Sbjct: 2431 TSPKP 2435
Score = 28.5 bits (62), Expect = 4.7
Identities = 30/120 (25%), Positives = 37/120 (30%), Gaps = 12/120 (10%)
Query: 100 NVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
+V LP + PF S +A P PP P P P P + P
Sbjct: 2382 SVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTI---- 2437
Query: 160 AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPAT------AKPAAPEPHPSPS 213
P A A P +A +E A S P T P P+P PS
Sbjct: 2438 --LPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPS 2495
Score = 28.1 bits (61), Expect = 6.1
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 12/97 (12%)
Query: 128 PIAAEPAA---AAPLTATPVAA----EPAAGAPVA-AEPAAEAPVGAEPAAEAPVAAEPA 179
P+ + P AP+T T + +P +P A P + EP P+ +P
Sbjct: 652 PVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT 711
Query: 180 AEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQ 216
P+A+ P E + AP PS EQ
Sbjct: 712 LHG----SPSAKAKQPPEADSLSKPAPPKEPSVPSEQ 744
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 58.5 bits (140), Expect = 4e-09
Identities = 57/185 (30%), Positives = 72/185 (38%), Gaps = 22/185 (11%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
PL P P PP L P+ PS P + P P SP P +
Sbjct: 385 PLSPLATPP---PQAPPALALPPLQAPPSPPASP------PLSPLATPSPQAPNALAVH- 434
Query: 93 FPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAP-LTATPVAAEPAAG 151
L + PP PP PF PP A+P P A P+ A P L A P+ P+
Sbjct: 435 -LLQAPFSPPPSPPVQAPFSPP-------ASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 486
Query: 152 APVAAEPAAEAPVGAEPAAEAP--VAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
A P+A P A P AP A+P +AP + + P+ PA+ AP
Sbjct: 487 ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPF-S 545
Query: 210 PSPSL 214
PS SL
Sbjct: 546 PSASL 550
Score = 53.5 bits (127), Expect = 1e-07
Identities = 43/124 (34%), Positives = 50/124 (40%), Gaps = 6/124 (4%)
Query: 96 ATQLNVPPLPPRGFPFVPPSRFFSAAAAP-AAPPI--AAEPAAAAPLTATP---VAAEPA 149
A L VPP PP P P + A P AAPP+ A P A P ATP P
Sbjct: 476 APPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPP 535
Query: 150 AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
A P A + A + P A P A P AP+ P + SP A +P P P
Sbjct: 536 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPD 595
Query: 210 PSPS 213
S S
Sbjct: 596 TSVS 599
Score = 52.4 bits (124), Expect = 3e-07
Identities = 60/203 (29%), Positives = 80/203 (39%), Gaps = 29/203 (14%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRP-VNTVPSYPGNTYTDTGLPSYPWILTS---PGFPYVY 88
P HPS P G++ L PP P + P+ + + PS L S P P
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATP 325
Query: 89 HIRGFPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAP-LTAT----- 142
H +P PP P PPS + + PA PP A + +P L AT
Sbjct: 326 HSSSLTCQLATPLPLAPPS--PSAPPS-LQTLPSPPATPPSQATTSLGSPTLQATHSFLP 382
Query: 143 -----PVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVA--AEPAAEAP----VGVEPAAE 191
P+A P P A P +AP P A P++ A P+ +AP V + A
Sbjct: 383 SPPLSPLATPPPQAPPALALPPLQAP--PSPPASPPLSPLATPSPQAPNALAVHLLQAPF 440
Query: 192 EPSPAEPATA---KPAAPEPHPS 211
P P+ P A PA+P PS
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPS 463
Score = 52.4 bits (124), Expect = 3e-07
Identities = 55/189 (29%), Positives = 71/189 (37%), Gaps = 18/189 (9%)
Query: 36 PSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTY--TDTGLPSYPWILTSPGFPYVYHIRGF 93
PS + P ++ LP P P S T T + LPS P + P
Sbjct: 343 PSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALAL 402
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP 153
P L PP PP P P A +P AP A AP + P A +P
Sbjct: 403 P---PLQAPPSPPASPPLSP-----LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 454
Query: 154 VAA---EPAAEAPVGAEPAAEAP-VAAEPAAEAPVGVEPAAEEPSPAEPATAKP----AA 205
A+ P+A P A P+ AP + P+ A + P+A P A P A P A
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 206 PEPHPSPSL 214
P P P+L
Sbjct: 515 PPPQAPPAL 523
Score = 41.6 bits (96), Expect = 5e-04
Identities = 54/189 (28%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGN---TYTDTGLPSYPWILTSPGFPYVYH 89
P+ PS P PP L P+ PS P + + + T P P L +P
Sbjct: 459 PVSPSATPP---SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 515
Query: 90 IRGFP--LATQ-LNVPPLPPRGFPFVPPSRFFSAAAAP----AAPPIAAEPAAAAPLTAT 142
P LAT L P PP FP P F +A+ P A PP A P AAPL
Sbjct: 516 PPQAPPALATPPLQALPSPPASFPGQAP--FSPSASLPMSPLATPPPQAPPVLAAPLLQV 573
Query: 143 PVA--AEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAA--EEPSPAEP 198
P + A P AP P P + +A P P P++ P A
Sbjct: 574 PPSPPASPTLQAP--RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGH 631
Query: 199 ATAKPAAPE 207
+++ + PE
Sbjct: 632 SSSATSTPE 640
Score = 38.9 bits (89), Expect = 0.003
Identities = 60/227 (26%), Positives = 74/227 (32%), Gaps = 56/227 (24%)
Query: 36 PSLNIPYGIRNLPPPLYYRPVNTVPS----YPGNT--YTDTGLPSYPWILTSPGFPYVYH 89
P L + PP L P+ +PS +PG LP P P P V
Sbjct: 508 PPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL- 566
Query: 90 IRGFPLATQLNVPPLPPRG----FPFVPPS----------RFFSAAAAPAAPPIAAEPAA 135
A L VPP PP P PP+ R A A PP + P++
Sbjct: 567 -----AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS 621
Query: 136 ----------AAPLTATPVAAE---------PAAGAPVAAEPAAEAPVGAEPAAEAPVAA 176
++ T+TP AA P AE AA P P+A
Sbjct: 622 TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAF 681
Query: 177 EPAAEAPVGVEPAAE-----------EPSPAEPATAKPAAPEPHPSP 212
A AP+ PA E E AT P A +P PSP
Sbjct: 682 RGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSP 728
Score = 35.4 bits (80), Expect = 0.038
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
P SR S++A P + P + P+A A ++P A P P P +A
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP----PRKDA 292
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAP-EPHPS 211
A P + +P+ A PS A + A P P PH S
Sbjct: 293 APALGPLSSSPL----ATPSPSAALQSQAPPTLPATPHSS 328
Score = 31.6 bits (70), Expect = 0.55
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 123 APAAPPIAAEPAAAAPLT-----ATPVAAEPAAGAPVAAEPAAEAPVGAEP-----AAEA 172
A A+PP AE AA P A P+A A GAP+ PA P A+ E
Sbjct: 653 AAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPAT-GPGSADGLCTIYETEG 711
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
P +A PA P A +P P+ + AA
Sbjct: 712 PESATPA--------PGALDPGPSPGTSGGKAA 736
Score = 30.4 bits (67), Expect = 1.2
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVA-AEPAAEAPVGAEPAAEAPVAAE 177
SA P + ++A PL++ + A G P A A P+ P G + A P
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ-ALRPPQVTP 287
Query: 178 PAAEAPVGVEPAAEEP--SPAEPATAKPAAPEPHPS 211
P +A + P + P +P+ A + AP P+
Sbjct: 288 PRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPA 323
Score = 27.7 bits (60), Expect = 8.0
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 103 PLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEA 162
P PP P S + +P P+A L P + ++ A + PA
Sbjct: 198 PRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR-PASRSLSSSATPLSSPARSG 256
Query: 163 PVGAEPAAEAPVAAEPAAEAPVGVE--------PAAEEPSPA-EPATAKPAAPEPHPSPS 213
P A AP A P+ P G++ P ++ +PA P ++ P A P PS +
Sbjct: 257 P-SARGTPRAP--AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA-TPSPSAA 312
Query: 214 LE 215
L+
Sbjct: 313 LQ 314
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 58.5 bits (140), Expect = 4e-09
Identities = 57/185 (30%), Positives = 72/185 (38%), Gaps = 22/185 (11%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
PL P P PP L P+ PS P + P P SP P +
Sbjct: 346 PLSPLATPP---PQAPPALALPPLQAPPSPPASP------PLSPLATPSPQAPNALAVH- 395
Query: 93 FPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAP-LTATPVAAEPAAG 151
L + PP PP PF PP A+P P A P+ A P L A P+ P+
Sbjct: 396 -LLQAPFSPPPSPPVQAPFSPP-------ASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 447
Query: 152 APVAAEPAAEAPVGAEPAAEAP--VAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
A P+A P A P AP A+P +AP + + P+ PA+ AP
Sbjct: 448 ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPF-S 506
Query: 210 PSPSL 214
PS SL
Sbjct: 507 PSASL 511
Score = 53.5 bits (127), Expect = 1e-07
Identities = 43/124 (34%), Positives = 50/124 (40%), Gaps = 6/124 (4%)
Query: 96 ATQLNVPPLPPRGFPFVPPSRFFSAAAAP-AAPPI--AAEPAAAAPLTATP---VAAEPA 149
A L VPP PP P P + A P AAPP+ A P A P ATP P
Sbjct: 437 APPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPP 496
Query: 150 AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
A P A + A + P A P A P AP+ P + SP A +P P P
Sbjct: 497 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPD 556
Query: 210 PSPS 213
S S
Sbjct: 557 TSVS 560
Score = 52.4 bits (124), Expect = 3e-07
Identities = 55/189 (29%), Positives = 71/189 (37%), Gaps = 18/189 (9%)
Query: 36 PSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTY--TDTGLPSYPWILTSPGFPYVYHIRGF 93
PS + P ++ LP P P S T T + LPS P + P
Sbjct: 304 PSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALAL 363
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP 153
P L PP PP P P A +P AP A AP + P A +P
Sbjct: 364 P---PLQAPPSPPASPPLSP-----LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 415
Query: 154 VAA---EPAAEAPVGAEPAAEAP-VAAEPAAEAPVGVEPAAEEPSPAEPATAKP----AA 205
A+ P+A P A P+ AP + P+ A + P+A P A P A P A
Sbjct: 416 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 475
Query: 206 PEPHPSPSL 214
P P P+L
Sbjct: 476 PPPQAPPAL 484
Score = 52.0 bits (123), Expect = 4e-07
Identities = 68/221 (30%), Positives = 85/221 (38%), Gaps = 50/221 (22%)
Query: 33 PLHPSLNIPYGIRNLPPP---------------LYYRPVNTV-------PSYPGNTYTDT 70
P HPS P G++ L PP L P+ T PS P + T
Sbjct: 257 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLP 316
Query: 71 GLPSYP--WILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPP 128
P+ P TS G P + F L PPL P P PP A A A PP
Sbjct: 317 SPPATPPSQATTSLGSPTLQATHSF-----LPSPPLSPLATP--PPQ----APPALALPP 365
Query: 129 IAAEPA--AAAPLT--ATPVAAEPAA------GAPVAAEPAAEAPVGAEPAAEAPVA--A 176
+ A P+ A+ PL+ ATP P A AP + P+ P A PV+ A
Sbjct: 366 LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA 425
Query: 177 EPAAEAP--VGVEPAAEEPSP-AEPATAKPAAPEPHPSPSL 214
P ++AP + P PSP A P + A P P P L
Sbjct: 426 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL 466
Score = 41.6 bits (96), Expect = 5e-04
Identities = 54/189 (28%), Positives = 71/189 (37%), Gaps = 21/189 (11%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGN---TYTDTGLPSYPWILTSPGFPYVYH 89
P+ PS P PP L P+ PS P + + + T P P L +P
Sbjct: 420 PVSPSATPP---SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 476
Query: 90 IRGFP--LATQ-LNVPPLPPRGFPFVPPSRFFSAAAAP----AAPPIAAEPAAAAPLTAT 142
P LAT L P PP FP P F +A+ P A PP A P AAPL
Sbjct: 477 PPQAPPALATPPLQALPSPPASFPGQAP--FSPSASLPMSPLATPPPQAPPVLAAPLLQV 534
Query: 143 PVA--AEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAA--EEPSPAEP 198
P + A P AP P P + +A P P P++ P A
Sbjct: 535 PPSPPASPTLQAP--RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGH 592
Query: 199 ATAKPAAPE 207
+++ + PE
Sbjct: 593 SSSATSTPE 601
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEP------AAGAPVAAEPAAEAPVGA 166
P SR S++A P + P + P+A A ++P A P P +A
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287
Query: 167 EPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLE 215
P + +P+A + P P + + P+ PAT A SP+L+
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ 336
Score = 38.9 bits (89), Expect = 0.003
Identities = 60/227 (26%), Positives = 74/227 (32%), Gaps = 56/227 (24%)
Query: 36 PSLNIPYGIRNLPPPLYYRPVNTVPS----YPGNT--YTDTGLPSYPWILTSPGFPYVYH 89
P L + PP L P+ +PS +PG LP P P P V
Sbjct: 469 PPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL- 527
Query: 90 IRGFPLATQLNVPPLPPRG----FPFVPPS----------RFFSAAAAPAAPPIAAEPAA 135
A L VPP PP P PP+ R A A PP + P++
Sbjct: 528 -----AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS 582
Query: 136 ----------AAPLTATPVAAE---------PAAGAPVAAEPAAEAPVGAEPAAEAPVAA 176
++ T+TP AA P AE AA P P+A
Sbjct: 583 TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAF 642
Query: 177 EPAAEAPVGVEPAAE-----------EPSPAEPATAKPAAPEPHPSP 212
A AP+ PA E E AT P A +P PSP
Sbjct: 643 RGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSP 689
Score = 37.4 bits (85), Expect = 0.010
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 120 AAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPA 179
A +P+APP + P + L + P A P+ P +A P+ A P
Sbjct: 296 ATPSPSAPPSPSAPPSLQTLPSPP-ATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP 354
Query: 180 AEAPVGVEPAAEEP---SPAEPATAKPAAPEPHPSPSLEQA 217
+AP PA P +P P + P +P PSP A
Sbjct: 355 PQAP----PALALPPLQAPPSPPASPPLSPLATPSPQAPNA 391
Score = 34.3 bits (77), Expect = 0.085
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVA-AEPAAEAPVGAE---------P 168
SA P + ++A PL++ + A G P A A P+ P G + P
Sbjct: 220 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 279
Query: 169 AAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPS 213
+A A P + +P+ + PSP+ P + + P PS
Sbjct: 280 RKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPS 324
Score = 31.6 bits (70), Expect = 0.55
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 123 APAAPPIAAEPAAAAPLT-----ATPVAAEPAAGAPVAAEPAAEAPVGAEP-----AAEA 172
A A+PP AE AA P A P+A A GAP+ PA P A+ E
Sbjct: 614 AAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPAT-GPGSADGLCTIYETEG 672
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
P +A PA P A +P P+ + AA
Sbjct: 673 PESATPA--------PGALDPGPSPGTSGGKAA 697
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 57.4 bits (137), Expect = 9e-09
Identities = 57/177 (32%), Positives = 69/177 (38%), Gaps = 13/177 (7%)
Query: 36 PSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPL 95
P N+P PPP P P P ++ T L S P LT P V P
Sbjct: 167 PRPNVPAPPPPTPPP---PPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVV--APPVPC 221
Query: 96 ATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATP------VAAEPA 149
A PP PP P P S A P P+ P PL P + AEPA
Sbjct: 222 APPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHL-PPIPPPLPLLPPCGYPGLKAEPA 280
Query: 150 AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAP 206
+ A A EP A P A+ +P A+ PA P GV ++E P P P + AP
Sbjct: 281 SPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLP-GVNSSSETPPPLPPKSPSFQAP 336
Score = 40.4 bits (93), Expect = 0.001
Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 28/133 (21%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVA-------- 145
P L++PP+PP P +PP + A PA+P A+ A P P A
Sbjct: 250 PQLAPLHLPPIPPP-LPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASL 308
Query: 146 -AEPAAGAPVAAE---------PAAEAP---VGAE--PAAEAPVAAEPAAEAPVGVEPAA 190
A P G ++E P+ +AP GA+ PA AP ++P + P A
Sbjct: 309 PAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGA 368
Query: 191 E----EPSPAEPA 199
P PA PA
Sbjct: 369 GGGKLNPPPAPPA 381
Score = 36.2 bits (82), Expect = 0.022
Identities = 48/187 (25%), Positives = 63/187 (33%), Gaps = 32/187 (17%)
Query: 48 PPPLYYRPVNTVPSYPGNTYTDTG---------LPSYPW---ILTSPGFPYVYHIRGFPL 95
PPP P P P + +D LP P +L G+P + P
Sbjct: 224 PPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASP- 282
Query: 96 ATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAA--------------EPAAAAPLTA 141
A PP PP P +PP S A+ APP+ P+ AP
Sbjct: 283 AQDAQEPPAPP---PPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQK 339
Query: 142 TPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATA 201
A PA AP ++P + P A P AP P E S ++ ATA
Sbjct: 340 AGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPP--PAPPARSPTTELSSKSQQATA 397
Query: 202 KPAAPEP 208
+P
Sbjct: 398 WTPTQQP 404
Score = 30.4 bits (67), Expect = 1.2
Identities = 33/123 (26%), Positives = 42/123 (34%), Gaps = 29/123 (23%)
Query: 102 PPLPPRGF--PFVPPSR------FFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP 153
P LP + P +PP+ + AA APP P AP TP P P
Sbjct: 133 PRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPP---RPNVPAPPPPTPPPPPPPLPPP 189
Query: 154 VAAEPAAEAPVGAEPA----AEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPH 209
+ + + P+ + P PV A P P A P P P P P
Sbjct: 190 LPSSSPIKTPLVSPPGPLTKGNLPVVAPPV--------PCAPPPPPPPPP------PTPP 235
Query: 210 PSP 212
P P
Sbjct: 236 PLP 238
Score = 28.1 bits (61), Expect = 6.1
Identities = 23/100 (23%), Positives = 28/100 (28%), Gaps = 11/100 (11%)
Query: 125 AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPV 184
+ PP + A P AG P + AP P P A +
Sbjct: 93 STPPTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRL 152
Query: 185 G-----------VEPAAEEPSPAEPATAKPAAPEPHPSPS 213
G P P+P P P P P P PS
Sbjct: 153 GNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPS 192
Score = 27.7 bits (60), Expect = 8.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 101 VPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAA 135
VPP PP P PP P+APP++ + ++
Sbjct: 3 VPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSS 37
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 57.4 bits (137), Expect = 9e-09
Identities = 43/99 (43%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
P R FSAAAA AA AA AAAA A P A AA AP A AA A A A A
Sbjct: 488 PLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPA 547
Query: 173 PVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPS 211
P AA A AP AA S +P+ A P P+
Sbjct: 548 PAAAPAVAAAPAAAASAAPSHS-QKPSVPLIQASRPCPA 585
Score = 48.1 bits (113), Expect = 6e-06
Identities = 41/109 (37%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 114 PSRFFSAAAAPAAPPIAAEPAAAAPLTATP-VAAEPAAGAPVAAEPAAEAPVGAEPAAEA 172
PS ++ + PP A P +A +AA AA A AA AA AP A AA A
Sbjct: 468 PSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAA 527
Query: 173 PVAAEPAAEAPVGVEPAAEEPSP-------AEPATAKPAAPEPHPSPSL 214
P A AA AP AA P+P A PA A AAP PS+
Sbjct: 528 PALA--AAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKPSV 574
Score = 48.1 bits (113), Expect = 6e-06
Identities = 34/82 (41%), Positives = 40/82 (48%)
Query: 119 SAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEP 178
+AAAA AA P A AAAAP A A AA A A PAA V A PAA A A
Sbjct: 509 AAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSH 568
Query: 179 AAEAPVGVEPAAEEPSPAEPAT 200
+ + V + A+ A+P T
Sbjct: 569 SQKPSVPLIQASRPCPAAQPPT 590
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 127 PPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGV 186
PP P+++ +++ AG+P+ +A A + A AA A AA AA AP
Sbjct: 462 PPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPA 521
Query: 187 EPAAEEP---SPAEPATAKPAAPEPHPS 211
AA P + A PA A AAP P P+
Sbjct: 522 LAAAAAPALAAAAAPALAAAAAPAPAPA 549
Score = 37.0 bits (84), Expect = 0.013
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 114 PSRFFSAAAAPA-----APPIAAEPA-AAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAE 167
P+ +AAAAPA AP +AA A A AP A VAA PAA A A + + V
Sbjct: 518 PAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKPSVPLI 577
Query: 168 PAAEAPVAAEPAAEAPVGVEPAAE 191
A+ AA+P + + + PA +
Sbjct: 578 QASRPCPAAQPPTKF-IKIAPAIQ 600
Score = 29.6 bits (65), Expect = 2.1
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 8/98 (8%)
Query: 120 AAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAP---VAA 176
AAAA AP AA PA AA A AA + P A P PAA+ P +
Sbjct: 539 AAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKPSVPLIQASRPC---PAAQPPTKFIKI 595
Query: 177 EPAAEAPVGVE--PAAEEPSPAEPATAKPAAPEPHPSP 212
PA + G A P + A A ++ +P +P
Sbjct: 596 APAIQLRTGSTGLKAINVEGPVQGAQALGSSFKPVQAP 633
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 55.1 bits (131), Expect = 5e-08
Identities = 58/185 (31%), Positives = 76/185 (41%), Gaps = 27/185 (14%)
Query: 49 PPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVP------ 102
PPL RP P PG LP +P PG P + + G P ++ P
Sbjct: 858 PPLSPRPEKP-PEEPGQCPAPEELPLFP----PPGEPSLSPLLGEPALSEPGEPPLSPLP 912
Query: 103 ---PLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVA-AEPAAGAPVAAEP 158
PL P G P + P P PP++ AAAP +P+ E GA ++P
Sbjct: 913 EELPLSPSGEPSLSPQLM---PPDPLPPPLSPIITAAAPPALSPLGELEYPFGAKGDSDP 969
Query: 159 AAEAPVGAEPAAEAPVAAEPAAEA--PVGVEPAAEEPSPAEP-ATAKPAAPEPHP---SP 212
E+P+ A P E P++ P A P V P PSP P A P EP P SP
Sbjct: 970 --ESPLAA-PILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSP 1026
Query: 213 SLEQA 217
L+ +
Sbjct: 1027 LLQHS 1031
Score = 41.2 bits (95), Expect = 7e-04
Identities = 47/168 (27%), Positives = 59/168 (35%), Gaps = 20/168 (11%)
Query: 60 PSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGF----PLATQLNVPPLPPRGFPFVPPS 115
P PG+T TD Y + G P H+ P Q PL G P
Sbjct: 374 PPEPGDTPTDEPDALY---VACQGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQL 430
Query: 116 RFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVA 175
P PP P + P +P + P A + P E P A P EA
Sbjct: 431 EAPLNEEMPLLPPPEESPLSPPP-EESPTSPPPEASR--LSPPPEELP--ASPLPEALHL 485
Query: 176 AEPAAEAPVGVEPAAE------EPSPAEPATAKPAAP--EPHPSPSLE 215
+ P E+P+ P E SP P P +P E PSP+LE
Sbjct: 486 SRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALE 533
Score = 40.8 bits (94), Expect = 0.001
Identities = 54/192 (28%), Positives = 70/192 (36%), Gaps = 35/192 (18%)
Query: 31 GHPLHPSLNIPYG--IRNLPPPL---YYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFP 85
G L P L P + LPPP P P+ P + P P L + P
Sbjct: 423 GVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPP--PEELPASPLP 480
Query: 86 YVYHIRGFPLATQLNVPPL--PPRGFPFVPP---SRFFSAAAAPAAPPIAAEPAAAAPLT 140
H L+ L PL PP P PP S F +P +PP + P+ P
Sbjct: 481 EALH-----LSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPS---PAL 532
Query: 141 ATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPAT 200
TP++ P EA + P E+P++ P E P P A SP P
Sbjct: 533 ETPLSPPP------------EASPLSPPFEESPLSPPPE-ELPTSPPPEASRLSP--PPE 577
Query: 201 AKPAAPEPHPSP 212
P +P P SP
Sbjct: 578 ESPMSPPPEESP 589
Score = 40.0 bits (92), Expect = 0.002
Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 29/147 (19%)
Query: 73 PSYPWILTSPGF--PYVYHIRGFPLATQLNVPP------LPPRGFPFVPPSRFFSAAAAP 124
PS+P I + PY PL + PP LPPR P P SR P
Sbjct: 2363 PSHPDIFRPGSYTDPYAQP----PLTPRPQPPPPESCCALPPRSLPSDPFSR------VP 2412
Query: 125 AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPV 184
A+P ++ ++ +PLT P++AE +PV + P P+ P + +P A
Sbjct: 2413 ASPQ--SQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPS--RPQSRDPFA---- 2464
Query: 185 GVEPAAEEPSPAEPATAKPAAPEPHPS 211
P + P P P A A H S
Sbjct: 2465 ---PLHKPPRPQPPEVAFKAGSLAHTS 2488
Score = 38.5 bits (88), Expect = 0.005
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 25/144 (17%)
Query: 92 GFPLATQLNVP-----PL--PPRGFPFVPPSRFFSAAAAPAAPPIAAEPAA--AAPLTAT 142
G L QL P PL PP P PP + P A ++ P A+PL
Sbjct: 423 GVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEA 482
Query: 143 PVAAEPAAGAPVAAEPAAEAPVGAEPAA-------EAPVAA------EPAAEAPVGVEPA 189
+ P +P++ P E+P+ P + E+P++ PA E P+ P
Sbjct: 483 LHLSRPLEESPLSPPPE-ESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPE 541
Query: 190 AEEPSPAEPATAKPAAPEPHPSPS 213
A SP P P +P P P+
Sbjct: 542 ASPLSP--PFEESPLSPPPEELPT 563
Score = 38.5 bits (88), Expect = 0.005
Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 27/144 (18%)
Query: 94 PLATQLNVPPL------PPRGFPFVPP---SRFFSA-AAAPAAPPIAAEPAAAAPLTA-- 141
P A++L+ PP PP P PP SR F +P +PP P + P +
Sbjct: 567 PEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRL 626
Query: 142 ---------TPVAAEPAAGAPVAAEPAAEAPVGAE---PAAEAPVAAEPAAEAPVGVEPA 189
+P E P + PV + P E+P++ P E+P P
Sbjct: 627 SPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPE-ESPTSPPPE 685
Query: 190 AEEPSPAEPATAKPAAPEPHPSPS 213
A SP P P +P P SP+
Sbjct: 686 ASRLSP--PPEDSPTSPPPEDSPA 707
Score = 38.1 bits (87), Expect = 0.006
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 102 PPLPPRGFPFVPPSRFFSAAAAPAAPPIAA-EPAAAAPLTATPVAAEPAAGAPVAAEPAA 160
PP P P + + + P + + +P PL A+P A V EP
Sbjct: 374 PPEPGDTPTDEPDALYVACQGQPKGGHVTSMQPKEPGPLQCE---AKPLGKAGVQLEPQL 430
Query: 161 EAPVGAE-----PAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP---HPSP 212
EAP+ E P E+P+ + P E+P P A SP P PA+P P H S
Sbjct: 431 EAPLNEEMPLLPPPEESPL-SPPPEESPTSPPPEASRLSP--PPEELPASPLPEALHLSR 487
Query: 213 SLEQA 217
LE++
Sbjct: 488 PLEES 492
Score = 31.6 bits (70), Expect = 0.55
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 16/84 (19%)
Query: 100 NVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
NV L R PP P+ PP P+ A+P T EP P EP
Sbjct: 4897 NVSNLDVRQLSAPPPEE-------PSPPPSPLAPSPASPPT------EPLVELPT--EPL 4941
Query: 160 AEAPVGAE-PAAEAPVAAEPAAEA 182
AE PV + P A +P +A P A
Sbjct: 4942 AEPPVPSPLPLASSPESARPKPRA 4965
Score = 30.4 bits (67), Expect = 1.2
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
Query: 125 AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGA--EPAAEAPVAAEPAAEA 182
A PP+ P P + + P + PA+ + P P++AE +
Sbjct: 2379 AQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPS 2438
Query: 183 PVGVEPAAEEP---SPAEPATAKPAAP---EPHPSP 212
PV + +P P+ P + P AP P P P
Sbjct: 2439 PVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQP 2474
Score = 30.4 bits (67), Expect = 1.2
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 139 LTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPV-GVEPAAEEPSPAE 197
L+A P +P+A PA+ EP E P EP AE PV P A P A
Sbjct: 4906 LSAPPPEEPSPPPSPLAPSPASPP---TEPLVELPT--EPLAEPPVPSPLPLASSPESAR 4960
Query: 198 PATAKPAAPEP 208
P KP A P
Sbjct: 4961 P---KPRARPP 4968
Score = 30.4 bits (67), Expect = 1.2
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 154 VAAEPAAEAPVGAEPAAEAPVA--AEPAAEAPVGVEPAAEEPSPAE-PATAKPAAPEPHP 210
++A P E P A +P + EP E P EP AE P P+ P + P + P P
Sbjct: 4906 LSAPPPEEPSPPPSPLAPSPASPPTEPLVELPT--EPLAEPPVPSPLPLASSPESARPKP 4963
Score = 30.0 bits (66), Expect = 1.6
Identities = 26/103 (25%), Positives = 34/103 (33%), Gaps = 16/103 (15%)
Query: 110 PFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPA 169
P P + A P PP P A L+ PV PV P +P +
Sbjct: 4269 PQTGPLQELGAGPRPQGPPRLPAPPGA--LSTGPVLG------PVHPTPPPSSPQEPKRP 4320
Query: 170 AEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSP 212
++ P +P P + P P T KP P P P
Sbjct: 4321 SQLP--------SPSSQLPTEAQLPPTHPGTPKPQGPTLEPPP 4355
Score = 29.6 bits (65), Expect = 2.1
Identities = 48/197 (24%), Positives = 64/197 (32%), Gaps = 41/197 (20%)
Query: 55 PVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGF---PLATQ----LNVPPLPPR 107
P P+YP T P+YP + G P + G P A Q PP PR
Sbjct: 2176 PFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPR 2235
Query: 108 GFPFVP--------PSRFFSAAAAPAAPPIAAEPAAAAPLTATPV--------------- 144
P P PS A P +P + A+ L+ P
Sbjct: 2236 HQPSTPDPFLKPRCPS--LDNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKEELG 2293
Query: 145 AAEPAAGAP---VAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPS----PAE 197
A+ P+ G P P++ +G V P VEP + P P E
Sbjct: 2294 ASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVEP--QSPGLGLRPQE 2351
Query: 198 PATAKPAAPEPHPSPSL 214
P A+ AP P P +
Sbjct: 2352 PPPAQALAPSPPSHPDI 2368
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 53.1 bits (126), Expect = 2e-07
Identities = 58/173 (33%), Positives = 70/173 (40%), Gaps = 15/173 (8%)
Query: 36 PSLNIPYGIRNLP--PPLYYRPVNT--VPSYPGN-TYTDTGLPSYPWILTSPGFPYVYHI 90
P L P G P PP+ +PV T VP G+ T T +P L PG P V
Sbjct: 1209 PPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVP-----LPGPGSPEVKRA 1263
Query: 91 RGFPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPA-APPIAAEPAAAAPLTATPVAAEPA 149
G P PP P P + S +A P+ AP A +P AA A P P+
Sbjct: 1264 HGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAAL---AKPPGTPPS 1320
Query: 150 AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAK 202
GA A P+ AP PA + P AA AA A E SP + A K
Sbjct: 1321 LGASPAKPPSPGAPALHVPA-KPPRAAAAAAAAAAAPPAPPEGASPGDSARQK 1372
Score = 48.9 bits (115), Expect = 3e-06
Identities = 48/160 (30%), Positives = 61/160 (38%), Gaps = 18/160 (11%)
Query: 48 PPPLYYRPVNTVPSYPGNTYTDTGLPSYPW-ILTSPGFPYVYHIRGFPLATQLNVPPLPP 106
PPP + +P G P P +LT P V ++G P T VP LP
Sbjct: 1200 PPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQP----VPKLQGSPTPTSKKVP-LPG 1254
Query: 107 RGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGA 166
G P V + +P PP P A P+ A +AG A PA + P
Sbjct: 1255 PGSPEVKRAHGTPPPVSPKPPP---PPTAPKPVKAVAGLPSGSAGPSPAPSPARQPP--- 1308
Query: 167 EPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAP 206
A +A P +G P A+ PSP PA PA P
Sbjct: 1309 -----AALAKPPGTPPSLGASP-AKPPSPGAPALHVPAKP 1342
Score = 45.8 bits (107), Expect = 3e-05
Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 27/154 (17%)
Query: 87 VYH-----IRGFPLATQLNVPPLPPRGFPFVPPSRFFS----------AAAAPAAPPIAA 131
VYH +R P + Q P LPP P PP + A PA PP++
Sbjct: 1169 VYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSP 1228
Query: 132 EPAAAAPL-----TATPVAAE---PAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAP 183
+P P+ + TP + + P G+P + A P P P A +A
Sbjct: 1229 KPVLTQPVPKLQGSPTPTSKKVPLPGPGSP-EVKRAHGTPPPVSPKPPPPPTAPKPVKAV 1287
Query: 184 VGVEPAAEEPSPA-EPATAKPA--APEPHPSPSL 214
G+ + PSPA PA PA A P PSL
Sbjct: 1288 AGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSL 1321
Score = 30.0 bits (66), Expect = 1.6
Identities = 53/214 (24%), Positives = 66/214 (30%), Gaps = 53/214 (24%)
Query: 49 PPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPP----L 104
PP+ +P +P PG ++ P P T PG P P V P L
Sbjct: 757 PPVPGKPRQVLP--PGTSHFTP--PQTP-TKTRPGSPQALGGPHGPAPATAKVKPTPQLL 811
Query: 105 PP----------------RGFPFVPP----SRFFSAAAAPAAPPIAAEPAAAAPLTATPV 144
PP RGF +V P AA PA PP+ A P P
Sbjct: 812 PPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPV----PTAVPTLCLPP 867
Query: 145 AAEPAAGAP----------VAAEPAAEAPVGAEPAAEAP-------VAAEPAAEAPVGVE 187
A+ G P A++ E PAA P V + AP G +
Sbjct: 868 EADAEPGRPKKRAHSLNRYAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGAD 927
Query: 188 PAAEEPSPAEPATAKPAAPEPHP---SPSLEQAN 218
K P P P S +L AN
Sbjct: 928 KNVNRSQSFAVRPRKKGPPPPPPKRSSSALASAN 961
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 53.1 bits (126), Expect = 2e-07
Identities = 46/129 (35%), Positives = 51/129 (39%), Gaps = 9/129 (6%)
Query: 94 PLATQLNV-PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGA 152
P+A + V PPL P AP P PA A+ PV A A A
Sbjct: 97 PVAVAVAVSPPLEPAA------ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 150
Query: 153 PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPA-EPATAKPAAPEPHPS 211
P APV A AP A A AP V A P+PA PA A AP+ P
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Query: 212 PSLEQ-ANQ 219
S EQ ANQ
Sbjct: 211 ESAEQGANQ 219
Score = 47.4 bits (111), Expect = 1e-05
Identities = 38/109 (34%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 100 NVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
+VP P P PP + A APA P+AA AA PVA A AP A
Sbjct: 127 SVPVPAPASTP--PPVPVLAPAPAPAPAPVAAPVAA-------PVAVAVLAPAPAPAPAP 177
Query: 160 AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
A AP A AP A A AP AA + S + A EP
Sbjct: 178 APAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEP 226
Score = 45.1 bits (105), Expect = 5e-05
Identities = 37/104 (35%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPA---- 149
P +T VP L P P P AAP A P+A A AP A A PA
Sbjct: 133 PASTPPPVPVLAPAPAPAPAP------VAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAA 186
Query: 150 -AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEE 192
A AP A A AP A AA A + A + G EP A++
Sbjct: 187 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQ 230
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 129 IAAEPAAAAPLTATPV--AAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGV 186
+A P A A + P+ AAE G A E PV A + PV A AP
Sbjct: 93 LAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPA 152
Query: 187 EPAAEEPSPAEPATAKPA---APEPHPSPS 213
AA +P A PA AP P P+P+
Sbjct: 153 PVAAPVAAPVAVAVLAPAPAPAPAPAPAPA 182
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 53.1 bits (126), Expect = 2e-07
Identities = 46/129 (35%), Positives = 51/129 (39%), Gaps = 9/129 (6%)
Query: 94 PLATQLNV-PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGA 152
P+A + V PPL P AP P PA A+ PV A A A
Sbjct: 97 PVAVAVAVSPPLEPAA------ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 150
Query: 153 PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPA-EPATAKPAAPEPHPS 211
P APV A AP A A AP V A P+PA PA A AP+ P
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Query: 212 PSLEQ-ANQ 219
S EQ ANQ
Sbjct: 211 ESAEQGANQ 219
Score = 47.4 bits (111), Expect = 1e-05
Identities = 38/109 (34%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 100 NVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
+VP P P PP + A APA P+AA AA PVA A AP A
Sbjct: 127 SVPVPAPASTP--PPVPVLAPAPAPAPAPVAAPVAA-------PVAVAVLAPAPAPAPAP 177
Query: 160 AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
A AP A AP A A AP AA + S + A EP
Sbjct: 178 APAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEP 226
Score = 45.1 bits (105), Expect = 5e-05
Identities = 37/104 (35%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPA---- 149
P +T VP L P P P AAP A P+A A AP A A PA
Sbjct: 133 PASTPPPVPVLAPAPAPAPAP------VAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAA 186
Query: 150 -AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEE 192
A AP A A AP A AA A + A + G EP A++
Sbjct: 187 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQ 230
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 129 IAAEPAAAAPLTATPV--AAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGV 186
+A P A A + P+ AAE G A E PV A + PV A AP
Sbjct: 93 LAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPA 152
Query: 187 EPAAEEPSPAEPATAKPA---APEPHPSPS 213
AA +P A PA AP P P+P+
Sbjct: 153 PVAAPVAAPVAVAVLAPAPAPAPAPAPAPA 182
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 53.1 bits (126), Expect = 2e-07
Identities = 46/129 (35%), Positives = 51/129 (39%), Gaps = 9/129 (6%)
Query: 94 PLATQLNV-PPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGA 152
P+A + V PPL P AP P PA A+ PV A A A
Sbjct: 108 PVAVAVAVSPPLEPAA------ESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 161
Query: 153 PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPA-EPATAKPAAPEPHPS 211
P APV A AP A A AP V A P+PA PA A AP+ P
Sbjct: 162 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 221
Query: 212 PSLEQ-ANQ 219
S EQ ANQ
Sbjct: 222 ESAEQGANQ 230
Score = 47.4 bits (111), Expect = 1e-05
Identities = 38/109 (34%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 100 NVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
+VP P P PP + A APA P+AA AA PVA A AP A
Sbjct: 138 SVPVPAPASTP--PPVPVLAPAPAPAPAPVAAPVAA-------PVAVAVLAPAPAPAPAP 188
Query: 160 AEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
A AP A AP A A AP AA + S + A EP
Sbjct: 189 APAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEP 237
Score = 45.1 bits (105), Expect = 5e-05
Identities = 37/104 (35%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPA---- 149
P +T VP L P P P AAP A P+A A AP A A PA
Sbjct: 144 PASTPPPVPVLAPAPAPAPAP------VAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAA 197
Query: 150 -AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEE 192
A AP A A AP A AA A + A + G EP A++
Sbjct: 198 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQ 241
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 129 IAAEPAAAAPLTATPV--AAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGV 186
+A P A A + P+ AAE G A E PV A + PV A AP
Sbjct: 104 LAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPA 163
Query: 187 EPAAEEPSPAEPATAKPA---APEPHPSPS 213
AA +P A PA AP P P+P+
Sbjct: 164 PVAAPVAAPVAVAVLAPAPAPAPAPAPAPA 193
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 52.4 bits (124), Expect = 3e-07
Identities = 45/135 (33%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAP-PIAAEPAAAAPLTA-------TPVA 145
PLA + P PP + S S +A+ P P +A P+ PL+A PV+
Sbjct: 251 PLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVS 310
Query: 146 AEPAAGAPVAAEPAAE----APVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATA 201
A P A P+A APV A P + PAA AP V PS P+T
Sbjct: 311 APPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTP 370
Query: 202 K--PA-APEPHPSPS 213
PA AP P P+P+
Sbjct: 371 TLIPAFAPTPVPAPT 385
Score = 48.1 bits (113), Expect = 6e-06
Identities = 49/157 (31%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 81 SPGFPYVYHIRGFPLATQLNVP-PLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPA----- 134
+PG V H L+VP P+P G V + A + P AP A PA
Sbjct: 207 APGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPAPSPPLAPVPALAPAPPSVP 266
Query: 135 -----------AAAPLTATPVAAEPAAGAPVAAEPAA--EAPVGAEPAA--EAPV--AAE 177
+A+ L P +A P+ P++A A PV A P A +APV +A
Sbjct: 267 TLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAP 326
Query: 178 PAAEAPVGVEPAAEEPSPAEPAT-AKPAAPEPHPSPS 213
APV A P+ PA A P+ P P P+PS
Sbjct: 327 TLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPS 363
Score = 44.7 bits (104), Expect = 6e-05
Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 2/117 (1%)
Query: 99 LNVPPLPPRGFPF-VPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAE 157
L+ P P P PP A P+AP + P L P + PAA AP +
Sbjct: 297 LSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVP 356
Query: 158 PAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA-PEPHPSPS 213
P P+ + A P P+P A PAA P P P+
Sbjct: 357 MPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIPTSAPIPA 413
Score = 42.0 bits (97), Expect = 4e-04
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 28/185 (15%)
Query: 31 GHPLHPSLNIPYGIRNLPPPLYYRPVN--TVPSYPG--NTYTDTGLPSY------PWILT 80
G L PS + Y +PPP +P++ T+P+ G +T T LPSY P +L
Sbjct: 440 GTVLTPSQPLVY----IPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCLPGVLA 495
Query: 81 SP---GFPYVYHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPP----IAAEP 133
SP +PY + + PL + + L P PS + AP P +
Sbjct: 496 SPELRSYPYAFSVAR-PLTSDSKLVSLEVNRLPCTSPSGSTTTQPAPDGVPGPLADTSLV 554
Query: 134 AAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAE------APVAAEPAAEAPVGVE 187
A+A + TP PA A A+ P G E E +P+ + P E +
Sbjct: 555 TASAKVLPTPQPLLPAPSGSSAPPHPAKMPSGTEQQTEGTSVTFSPLKSPPQLEREMASP 614
Query: 188 PAAEE 192
P E
Sbjct: 615 PECSE 619
Score = 37.4 bits (85), Expect = 0.010
Identities = 32/115 (27%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 94 PLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAP 153
PL+ ++ PPL P VPPS A P +A PA+ P P + P
Sbjct: 304 PLSVPVSAPPLALIQAP-VPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTP 362
Query: 154 VAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
+ P+ + A AP AP+ PA A PA +AP P
Sbjct: 363 SSGPPSTPTLI----PAFAPTPVPAPTPAPI-FTPAPTPMPAATPAAIPTSAPIP 412
Score = 27.7 bits (60), Expect = 8.0
Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 16/117 (13%)
Query: 49 PPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRG 108
P L PV T P T P+ P + P T + PP P
Sbjct: 326 PTLVLAPVPTPVLAPMPASTPPAAPAPPSV-------------PMPTPTPSSGPPSTPTL 372
Query: 109 FPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVA--AEPAAEAP 163
P P+ + AP P A P AA A P +A A ++ PAA+AP
Sbjct: 373 IPAFAPTPVPAPTPAPIFTP-APTPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAP 428
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 52.0 bits (123), Expect = 4e-07
Identities = 42/109 (38%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 113 PPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPV-GAEPAAE 171
PP S AAAP+AP A P+ L A P++A A A + PAA A GA+P +
Sbjct: 237 PPRPSLSPAAAPSAPGPA--PSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSR 294
Query: 172 APVAAEPAAEAPVGVEPAAEEPSPAEPATAK-PAAPEPHPSPSLEQANQ 219
E A P G AE +PA P+ A PAAP P P+P ++Q
Sbjct: 295 P----ESGASTPGG---PAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQ 336
Score = 44.7 bits (104), Expect = 6e-05
Identities = 42/129 (32%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 102 PPLPPRGFPFVP---PSRFFSAAA------APAAPPIAAEPAAAAPLTATPVAAEPAAGA 152
P L P P P PS+ AA APAA + PAA A + P +GA
Sbjct: 240 PSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGA 299
Query: 153 PVAAEPAAEAPVGAEPAAEAPV--AAEPAAEAPVGVEP-AAEEPSPAEPATAKPAAPEPH 209
PA + A AA AP A PA ++ +P +A P P + AAP
Sbjct: 300 STPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAPGSLLGAAP-GL 358
Query: 210 PSPSLEQAN 218
PSP L Q +
Sbjct: 359 PSPLLPQTS 367
Score = 40.4 bits (93), Expect = 0.001
Identities = 49/172 (28%), Positives = 61/172 (35%), Gaps = 32/172 (18%)
Query: 48 PPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPR 107
PPP PS PG P PG + G P A P P
Sbjct: 236 PPPRPSLSPAAAPSAPG-----------PAPSQLPGLAALPLSAGAPAAAIAGSGPAAPA 284
Query: 108 GF----PFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAP 163
F P P S PA P A P+AA PA AP A PA ++
Sbjct: 285 AFEGAQPLSRPESGASTPGGPAEPSAPAAPSAA-----------PAPAAPAPA-PAPQSA 332
Query: 164 VGAEPAAEAPVAAEPAAEAPVGVEPAAEE-PSPAEPATAKPAAPEPHPSPSL 214
++P + A+ P A AP + AA PSP P T+ P+P S+
Sbjct: 333 ASSQPQS----ASTPPALAPGSLLGAAPGLPSPLLPQTSASGVIFPNPLVSI 380
Score = 38.5 bits (88), Expect = 0.005
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 37/165 (22%)
Query: 59 VPSYPGNTYTDTGLP---SYP-------WILTSPGFPYVYHIRGFPLATQLNVPPLPPRG 108
VP Y N T +G+P S P W+ + P P V P + L +PP P
Sbjct: 484 VPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPVLPTV------PTSVGLQLPPTVPGA 537
Query: 109 FPFVPPSRFFSAAAAPAAP-PIAAEPAAAAP--------LTATPVAAEPAAGAP--VAAE 157
+ A+ +P P P ++E A+ +P ++AT + + G P AE
Sbjct: 538 HGYADSPSATPASRSPQRPSPASSECASLSPGLNHVESGVSATAESPQSLLGGPPLTKAE 597
Query: 158 P---------AAEAPVGAE-PAAEAPVAAEPAAEAPVGVEPAAEE 192
P A +APVGA+ AA V P + G+ +E+
Sbjct: 598 PVSLPCTNARAGDAPVGAQASAAPTSVDGAPTSLGSPGLPAVSEQ 642
Score = 36.6 bits (83), Expect = 0.017
Identities = 35/95 (36%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 127 PP--IAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPV 184
PP I E A A P P + PA+ AE A GAE A E AE P+
Sbjct: 77 PPVLIVHEDAPAPPPEDFPEPS-PASSPSERAESEAAEEAGAEGAEGEARPVEKEAE-PM 134
Query: 185 GVEPA----AEEPSPAEPATAKPAAPEPHPSPSLE 215
EPA A P PA PA PA P + +LE
Sbjct: 135 DAEPAGDTRAPRPPPAAPAPPTPAYGAPSTNVTLE 169
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 51.6 bits (122), Expect = 5e-07
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 123 APAAPPIAAEPAAAAPLTATPVAAEPA-AGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAE 181
A A P++A PA P+ A A+ PA AP AA A AP + A A A +
Sbjct: 2 ATPAVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQ 61
Query: 182 APVGVEPAAEEPSPAEPATAKPAAPEPHP 210
P + A+ P+PA P PA P P P
Sbjct: 62 TPASAQAPAQTPAPALPG---PALPGPFP 87
Score = 51.2 bits (121), Expect = 7e-07
Identities = 33/83 (39%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 131 AEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPV-GAEPAAEAPVAAEPAAEAPVGVEPA 189
A P +A P T TPV A A P A APV A PA+ + AA AA A G PA
Sbjct: 5 AVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPA 64
Query: 190 AEEPSPAEPATAKPAAPEPHPSP 212
+ + PA A P P P P
Sbjct: 65 SAQAPAQTPAPALPGPALPGPFP 87
Score = 42.7 bits (99), Expect = 2e-04
Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 146 AEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
A PA PV+A PA PV A A P A APV PAA S ++PA A A
Sbjct: 2 ATPAV--PVSAPPATPTPVPAAAPASVPAPTPAPAAAPV---PAAAPASSSDPAAAAAAT 56
Query: 206 PEPHPSPSLEQA 217
P +P+ QA
Sbjct: 57 AAPGQTPASAQA 68
Score = 42.4 bits (98), Expect = 3e-04
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 96 ATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVA 155
A ++ PP P P P+ + APAA P+ AAAP + +++PAA A
Sbjct: 5 AVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPV----PAAAPAS----SSDPAAAAAAT 56
Query: 156 AEPAAEAPVGAEPAAEAPVAAEPAAEAP 183
A P + P A+ A+ P A P P
Sbjct: 57 AAP-GQTPASAQAPAQTPAPALPGPALP 83
Score = 41.6 bits (96), Expect = 5e-04
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 141 ATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEP-- 198
A PV+A PA PV A A P A APV PAA +PAA + A P
Sbjct: 5 AVPVSAPPATPTPVPAAAPASVPAPTPAPAAAPV---PAAAPASSSDPAAAAAATAAPGQ 61
Query: 199 ATAKPAAPEPHPSPSL 214
A AP P+P+L
Sbjct: 62 TPASAQAPAQTPAPAL 77
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 51.2 bits (121), Expect = 7e-07
Identities = 54/168 (32%), Positives = 65/168 (38%), Gaps = 29/168 (17%)
Query: 73 PSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVP-------PSRFFSAA---- 121
P +P L +P FP V + + +N P PP+G P SRFF++
Sbjct: 3 PVFPCTLLAPPFP-VLGLDSRGVGGLMNSFP-PPQGHAQNPLQVGAELQSRFFASQGCAQ 60
Query: 122 ----AAPAAPPIAAEPAA------------AAPLTATPVAAEPAAGAPVAAEPAAEAPVG 165
AAPA PP PAA AA +A AA AA A VAA P A A
Sbjct: 61 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS 120
Query: 166 AEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPS 213
A P P PAAE PA AT AA +P+
Sbjct: 121 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPT 168
Score = 41.2 bits (95), Expect = 7e-04
Identities = 35/108 (32%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 102 PPLP--PRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
PP P P P AAA +A AA AAAA + A P A A+ AA
Sbjct: 70 PPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQ 129
Query: 160 AEAPVGAEPAAEAPV--AAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
AP P AP AA PA+ A + A +P P A
Sbjct: 130 PPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVA 177
Score = 39.7 bits (91), Expect = 0.002
Identities = 26/58 (44%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 99 LNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAA 156
L PP PP PP SA AA AAPP +A AAA TA A APVA+
Sbjct: 127 LKQPPAPP------PPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVAS 178
Score = 31.2 bits (69), Expect = 0.72
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAA 176
A P PP++A A AAP PA+ A +AA A A APVA+
Sbjct: 132 APPPPPPPVSAPAAEAAP---------PASAATIAAAAATAVVAPTSTVAVAPVAS 178
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 51.2 bits (121), Expect = 7e-07
Identities = 54/168 (32%), Positives = 65/168 (38%), Gaps = 29/168 (17%)
Query: 73 PSYPWILTSPGFPYVYHIRGFPLATQLNVPPLPPRGFPFVP-------PSRFFSAA---- 121
P +P L +P FP V + + +N P PP+G P SRFF++
Sbjct: 3 PVFPCTLLAPPFP-VLGLDSRGVGGLMNSFP-PPQGHAQNPLQVGAELQSRFFASQGCAQ 60
Query: 122 ----AAPAAPPIAAEPAA------------AAPLTATPVAAEPAAGAPVAAEPAAEAPVG 165
AAPA PP PAA AA +A AA AA A VAA P A A
Sbjct: 61 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS 120
Query: 166 AEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPS 213
A P P PAAE PA AT AA +P+
Sbjct: 121 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPT 168
Score = 41.2 bits (95), Expect = 7e-04
Identities = 35/108 (32%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
Query: 102 PPLP--PRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPA 159
PP P P P AAA +A AA AAAA + A P A A+ AA
Sbjct: 70 PPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQ 129
Query: 160 AEAPVGAEPAAEAPV--AAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
AP P AP AA PA+ A + A +P P A
Sbjct: 130 PPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVA 177
Score = 39.7 bits (91), Expect = 0.002
Identities = 26/58 (44%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 99 LNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAA 156
L PP PP PP SA AA AAPP +A AAA TA A APVA+
Sbjct: 127 LKQPPAPP------PPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVAS 178
Score = 31.2 bits (69), Expect = 0.72
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 9/56 (16%)
Query: 121 AAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAA 176
A P PP++A A AAP PA+ A +AA A A APVA+
Sbjct: 132 APPPPPPPVSAPAAEAAP---------PASAATIAAAAATAVVAPTSTVAVAPVAS 178
Score = 30.0 bits (66), Expect = 1.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Query: 128 PIAAEPAAAAPLTATPVAAEPAA--------GAPVAAEPAAEAP 163
P+AA AAAA A VAA P A G PV+++P P
Sbjct: 433 PMAAAAAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQPLPSQP 476
Score = 28.5 bits (62), Expect = 4.7
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 158 PAAEAPVGAEPAAEAPVAAEPAAEAPV-GVE--PAAEEPSPAEP 198
P A A A AA A VAA P A + G E P + +P P++P
Sbjct: 433 PMAAAAAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQPLPSQP 476
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 51.2 bits (121), Expect = 7e-07
Identities = 37/76 (48%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 132 EPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAE 191
+ AA P P A P A EPA E P E AAE +A E AAE P EPAAE
Sbjct: 183 QEAALVPEPEVPADLAEMAREP-AEEPAEEKPT--EEAAEEELAEE-AAEEPAKEEPAAE 238
Query: 192 EPSPAEPATAKPAAPE 207
E S EPAT + AAPE
Sbjct: 239 EESAEEPATEEAAAPE 254
Score = 42.0 bits (97), Expect = 4e-04
Identities = 33/76 (43%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 125 AAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPV 184
A P PA A + P A EPA P E AAE + AE AAE P EPAAE
Sbjct: 186 ALVPEPEVPADLAEMAREP-AEEPAEEKPT--EEAAEEEL-AEEAAEEPAKEEPAAEEES 241
Query: 185 GVEPAAEEPSPAEPAT 200
EPA EE + E T
Sbjct: 242 AEEPATEEAAAPEEVT 257
Score = 38.1 bits (87), Expect = 0.006
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 143 PVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAK 202
P PA A +A EPA E PA E P E AAE + E AAEEP+ EPA +
Sbjct: 189 PEPEVPADLAEMAREPAEE------PAEEKPT--EEAAEEELA-EEAAEEPAKEEPAAEE 239
Query: 203 PAAPEP 208
+A EP
Sbjct: 240 ESAEEP 245
Score = 35.8 bits (81), Expect = 0.029
Identities = 30/88 (34%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 120 AAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPA 179
A A A A EPA P T AAE A EPA E P E +AE P E A
Sbjct: 195 ADLAEMAREPAEEPAEEKP---TEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAA 251
Query: 180 AEAPVGVEPAAEEPSPAEPATAKPAAPE 207
A V + A+ A K E
Sbjct: 252 APEEVTKYQHEKWDEEAQDAAGKEEKEE 279
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 50.8 bits (120), Expect = 9e-07
Identities = 44/115 (38%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 97 TQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLT-ATPVA--AEPAAGAP 153
T + PP P P + AA APAAP A P AP T A P A P AP
Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP 295
Query: 154 VAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
PAA G+ AA AP PAA P GV + +P P A AAP P
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPA---PAAGGPAGV---SGQPGPG----AAAAAPAP 340
Score = 48.9 bits (115), Expect = 3e-06
Identities = 37/93 (39%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 121 AAAPAAPPIAAEPAAAAPL-----TATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVA 175
AAAPA + PAA PL T + P GA PAA +P A PA AP A
Sbjct: 210 AAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAA-PAPAAPAA 268
Query: 176 AEPAAEAPVGVEPAAEEPSPAEPATAKPAAPEP 208
A P P A PA P TA PA P P
Sbjct: 269 A-PPPPPPAPATLARPPGHPAGPPTAAPAVPPP 300
Score = 48.9 bits (115), Expect = 3e-06
Identities = 45/134 (33%), Positives = 49/134 (36%), Gaps = 11/134 (8%)
Query: 85 PYVYHIRGFPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPV 144
P V + P A P P PP +A APAAP A PA AAP A P
Sbjct: 213 PAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPP- 271
Query: 145 AAEPAAGAPVAAEPAAEA-PVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKP 203
P A A +A P A P A PA P AA+ A PA PA P
Sbjct: 272 -PPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA--------PAAGGP 322
Query: 204 AAPEPHPSPSLEQA 217
A P P A
Sbjct: 323 AGVSGQPGPGAAAA 336
Score = 48.1 bits (113), Expect = 6e-06
Identities = 62/187 (33%), Positives = 70/187 (37%), Gaps = 29/187 (15%)
Query: 39 NIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRGFPLATQ 98
N P + LP P V P + G P P + P P P A
Sbjct: 220 NGPAALLPLPKPAAPGTVIQTPPFVG-----AAAPPAPAAPSPPAAP----APAAPAAAP 270
Query: 99 LNVPPLP-----PRGFPFVPPSRFFSAAAAPAAPPIAAEP----AAAAPLTATPVAAEPA 149
PP P P G P PP+ AAPA PP AA A AAP A P A PA
Sbjct: 271 PPPPPAPATLARPPGHPAGPPT------AAPAVPPPAAAQNGGSAGAAPAPA-PAAGGPA 323
Query: 150 --AGAP-VAAEPAAEAP-VGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSPAEPATAKPAA 205
+G P A AA AP V AE AA PAA+ PA+ S T + A
Sbjct: 324 GVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGAL 383
Query: 206 PEPHPSP 212
P P P
Sbjct: 384 PSPAAVP 390
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Query: 90 IRGFPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIA-AEPAAAAPLTATPVAAE- 147
+ G P P P G P AAP PP A P P P +
Sbjct: 63 VSGSPAGAAGAGPAAPAEGAP----------GAAPEPPPAGRARPGGGGPQRPGPPSPRR 112
Query: 148 ---PAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPS-PAEPAT-AK 202
PA AP AA+ A A P AA AA G EPA P+ PA PA A
Sbjct: 113 PLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAA----GPEPAPAGPAKPAGPAALAA 168
Query: 203 PAAPEPHPSP 212
A P P P P
Sbjct: 169 RAGPGPGPGP 178
Score = 38.5 bits (88), Expect = 0.005
Identities = 52/196 (26%), Positives = 64/196 (32%), Gaps = 23/196 (11%)
Query: 33 PLHPSLNIPYGIRNLPPPLYYRPVNTVPSYPGNTYTDTGLPSYPWILTSPGFPYVYHIRG 92
P P+ P PP RP P PG P P + P P +R
Sbjct: 75 PAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPS-----PRRPLVPAGPA-PPAAKLRP 128
Query: 93 FPLATQLNVPPLPPRGFPFVPPSRFFSAAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGA 152
P + + P+P P + A PA P A A P P G
Sbjct: 129 PPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGK 188
Query: 153 PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAA--EEPSPAEPATA--------- 201
P A AA+ G+ + AA PA V PAA P PA P T
Sbjct: 189 P-AGPGAAQTLNGSAALLNSHHAAAPAVSL-VNNGPAALLPLPKPAAPGTVIQTPPFVGA 246
Query: 202 ----KPAAPEPHPSPS 213
PAAP P +P+
Sbjct: 247 AAPPAPAAPSPPAAPA 262
Score = 34.3 bits (77), Expect = 0.085
Identities = 29/86 (33%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 123 APAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVAAEPAAEA 182
AP P + A AAA L V+ PA A AE GA P A P
Sbjct: 44 APRTPEVRA--AAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGG 101
Query: 183 PVGVEPAAEEPSPAEPATAKPAAPEP 208
P P PSP P PA P P
Sbjct: 102 PQRPGP----PSPRRPLV--PAGPAP 121
Score = 28.5 bits (62), Expect = 4.7
Identities = 32/78 (41%), Positives = 33/78 (42%), Gaps = 21/78 (26%)
Query: 142 TPVAAEPAAGA----PVAAEPAAEAPVGAEPAAEAPVAAEPAAEAPVGVEPAAEEPSP-- 195
TP AAGA V+ PA A GA PAA PA AP AA EP P
Sbjct: 47 TPEVRAAAAGALGNHVVSGSPAGAA--GAGPAA-------PAEGAP----GAAPEPPPAG 93
Query: 196 -AEPATAKPAAPEPHPSP 212
A P P P P PSP
Sbjct: 94 RARPGGGGPQRPGP-PSP 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,418,669
Number of Sequences: 37866
Number of extensions: 857333
Number of successful extensions: 20520
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 1223
Number of HSP's that attempted gapping in prelim test: 7520
Number of HSP's gapped (non-prelim): 8069
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.