Guide to the Human Genome
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Name: BCORL1 Sequence: fasta or formatted (1711aa) NCBI GI: 33286442
Description:

BCL6 co-repressor-like 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8        134           2
 C cysteine            1.9         32           1
 D aspartate           4.4         76           2
 E glutamate           5.8        100           9
 F phenylalanine       2.2         38           1
 G glycine             6.4        110           2
 H histidine           1.8         31           2
 I isoleucine          2.0         35           2
 K lysine              5.3         90           2
 L leucine             9.1        155           3
 M methionine          1.6         28           1
 N asparagine          2.8         48           2
 P proline            12.5        214           3
 Q glutamine           4.6         79           2
 R arginine            4.9         83           3
 S serine             11.5        197           3
 T threonine           6.4        110           3
 V valine              6.7        115           2
 W tryptophan          0.8         13           1
 Y tyrosine            1.3         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL6 co-repressor-like 1 
BCOR                  0.087   BCL-6 interacting corepressor isoform a 
BCOR                  0.087   BCL-6 interacting corepressor isoform c 
BCOR                  0.087   BCL-6 interacting corepressor isoform b 
BCOR                  0.087   BCL-6 interacting corepressor isoform a 
SRCAP                 0.033   Snf2-related CBP activator protein 
MUC2                  0.032   mucin 2 precursor 
NACA                  0.031   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
BAT2D1                0.027   HBxAg transactivated protein 2 
FLJ22184              0.027   PREDICTED: hypothetical protein LOC80164 
MUC17                 0.027   mucin 17 
TPRX1                 0.026   tetra-peptide repeat homeobox 
PRG4                  0.025   proteoglycan 4 isoform D 
PRG4                  0.025   proteoglycan 4 isoform C 
PRG4                  0.025   proteoglycan 4 isoform B 
PRG4                  0.025   proteoglycan 4 isoform A 
FMN2                  0.024   formin 2 
LOC100294420          0.024   PREDICTED: similar to mucin 2 
WNK2                  0.024   WNK lysine deficient protein kinase 2 
LOC100128719          0.022   PREDICTED: hypothetical protein, partial 
LOC100128719          0.022   PREDICTED: hypothetical protein, partial 
GLTSCR1               0.022   glioma tumor suppressor candidate region gene 1 [Ho...
LOC100134147          0.022   PREDICTED: hypothetical protein 
RAPH1                 0.022   Ras association and pleckstrin homology domains 1 is...
TAF4                  0.022   TBP-associated factor 4 
LOC284297             0.021   hypothetical protein LOC284297 
DGKK                  0.021   diacylglycerol kinase kappa 
KIAA0754              0.021   hypothetical protein LOC643314 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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