LOC727838 19001

Name: LOC727838	Sequence: fasta or formatted (294aa)		NCBI GI: 239746922
Description: PREDICTED: similar to cancer/testis antigen family 147, member B1 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {284aa} PREDICTED: similar to cancer/testis antigen family 147, member B1... alt prot {290aa} PREDICTED: similar to cancer/testis antigen family 147, member B1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.3 45 3 C cysteine 0.0 0 0 D aspartate 5.1 15 1 E glutamate 22.4 66 9 F phenylalanine 1.0 3 1 G glycine 9.5 28 3 H histidine 1.7 5 1 I isoleucine 2.4 7 1 K lysine 3.7 11 1 L leucine 6.8 20 3 M methionine 2.4 7 1 N asparagine 2.7 8 1 P proline 6.1 18 1 Q glutamine 3.1 9 1 R arginine 6.5 19 4 S serine 3.1 9 1 T threonine 2.4 7 1 V valine 4.4 13 1 W tryptophan 0.3 1 1 Y tyrosine 1.0 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cancer/testis antigen family ... LOC727838 0.944 PREDICTED: similar to cancer/testis antigen family ... LOC727838 0.908 PREDICTED: similar to cancer/testis antigen family ... CT47B1 0.614 cancer/testis antigen family 147, member B1 CT47A1 0.565 cancer/testis antigen family 47, member A1 CT47A2 0.565 cancer/testis antigen family 47, member A2 CT47A3 0.565 cancer/testis antigen family 47, member A3 CT47A4 0.565 cancer/testis antigen family 47, member A4 CT47A5 0.565 cancer/testis antigen family 47, member A5 CT47A6 0.565 cancer/testis antigen family 47, member A6 CT47A7 0.565 cancer/testis antigen family 47, member A7 CT47A8 0.565 cancer/testis antigen family 47, member A8 CT47A9 0.565 cancer/testis antigen family 47, member A9 CT47A10 0.565 cancer/testis antigen family 47, member A10 CT47A11 0.565 cancer/testis antigen family 47, member A11 RPGR 0.070 retinitis pigmentosa GTPase regulator isoform C [Hom... NEFH 0.058 neurofilament, heavy polypeptide 200kDa NEFM 0.058 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.058 neurofilament, medium polypeptide 150kDa isoform 2 ... RP1L1 0.058 retinitis pigmentosa 1-like 1 NEFL 0.056 neurofilament, light polypeptide 68kDa CCDC96 0.051 coiled-coil domain containing 96 PRKCSH 0.047 protein kinase C substrate 80K-H isoform 1 C4orf40 0.047 hypothetical protein LOC401137 MYT1 0.047 myelin transcription factor 1 WDR87 0.045 NYD-SP11 protein PELP1 0.045 proline, glutamic acid and leucine rich protein 1 [... PRKCSH 0.045 protein kinase C substrate 80K-H isoform 2 TRIM44 0.042 DIPB protein AKAP12 0.042 A kinase (PRKA) anchor protein 12 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.