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Search of human proteins with 154937344
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154937344 complement component 1, q subcomponent-like 2
[Homo sapiens]
(287 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 604 e-173
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 375 e-104
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 365 e-101
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 325 4e-89
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 130 2e-30
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 129 3e-30
gi|87298828 complement component 1, q subcomponent, B chain prec... 129 4e-30
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 122 3e-28
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 122 4e-28
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 120 2e-27
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 120 2e-27
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 117 2e-26
gi|4757760 adiponectin precursor [Homo sapiens] 115 4e-26
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 114 1e-25
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 114 1e-25
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 114 1e-25
gi|56786155 complement component 1, q subcomponent, C chain prec... 113 2e-25
gi|166235903 complement component 1, q subcomponent, C chain pre... 113 2e-25
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 109 2e-24
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 109 3e-24
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 109 3e-24
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 108 5e-24
gi|7705753 complement component 1, q subcomponent, A chain precu... 102 5e-22
gi|32698861 cerebellin 2 precursor [Homo sapiens] 89 6e-18
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 87 2e-17
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 85 6e-17
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 85 6e-17
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] 85 6e-17
gi|4757922 cerebellin 1 precursor [Homo sapiens] 84 1e-16
gi|18104944 cerebellin 4 precursor [Homo sapiens] 81 9e-16
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 604 bits (1557), Expect = e-173
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE 60
MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE
Sbjct: 1 MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE 60
Query: 61 VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQ 120
VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQ
Sbjct: 61 VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQ 120
Query: 121 LTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDV 180
LTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDV
Sbjct: 121 LTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDV 180
Query: 181 VTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ 240
VTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ
Sbjct: 181 VTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ 240
Query: 241 NYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
NYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD
Sbjct: 241 NYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 375 bits (963), Expect = e-104
Identities = 193/290 (66%), Positives = 218/290 (75%), Gaps = 38/290 (13%)
Query: 1 MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE 60
M L L+I +P+L+ +A +AHYEM+GTCRM+CDPY G KA PSTAA
Sbjct: 1 MVLLLVILIPVLVSSAGT-SAHYEMLGTCRMVCDPYG--------GTKA----PSTAATP 47
Query: 61 ---VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLP 117
+MQ L P FIQGPKG+ GRPGK GPRGPPGEPGPPGP GPPGEKG+ GR GLP
Sbjct: 48 DRGLMQSL-----PTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLP 102
Query: 118 GLQLTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKF 177
G G G+ ++ G +++A +T PKIAFY GLK HEGYEVLKF
Sbjct: 103 GPP-------------GAPGL--NAAGAISAATYSTV--PKIAFYAGLKRQHEGYEVLKF 145
Query: 178 DDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQD 237
DDVVTNLGNHYDPTTGKF+C + GIYFFTYH+LMRGGDGTSMWADLCKN QVRASAIAQD
Sbjct: 146 DDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQD 205
Query: 238 ADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
ADQNYDYASNSVVLHL+ GDEVY+KLDGGKAHGGNNNKYSTFSGF++Y D
Sbjct: 206 ADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGGNNNKYSTFSGFIIYAD 255
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 365 bits (938), Expect = e-101
Identities = 179/288 (62%), Positives = 213/288 (73%), Gaps = 31/288 (10%)
Query: 1 MALGLLIAVPLLLQAA-PRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAAL 59
M L L++ +P+L+ + P G HYEM+GTCRM+CDPY A PGA A+ G +
Sbjct: 1 MLLVLVVLIPVLVSSGGPEG--HYEMLGTCRMVCDPYPA----RGPGAGARTDGGDALS- 53
Query: 60 EVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGL 119
+ A PP +QGP+G PGR GKPGP GPPG+PGPPGP GPPGEKG+ G+PG PGL
Sbjct: 54 ---EQSGAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGL 110
Query: 120 QLTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDD 179
G GG G +++A T P++AFY GLK+PHEGYEVLKFDD
Sbjct: 111 P----------------GAGGS--GAISTATYTTV--PRVAFYAGLKNPHEGYEVLKFDD 150
Query: 180 VVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDAD 239
VVTNLGN+YD +GKF+C + G YFFTYH+LMRGGDGTSMWADLCKNGQVRASAIAQDAD
Sbjct: 151 VVTNLGNNYDAASGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDAD 210
Query: 240 QNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
QNYDYASNSV+LHLD+GDEV++KLDGGKAHGGN+NKYSTFSGF++Y D
Sbjct: 211 QNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNSNKYSTFSGFIIYSD 258
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 325 bits (832), Expect = 4e-89
Identities = 170/287 (59%), Positives = 194/287 (67%), Gaps = 49/287 (17%)
Query: 1 MALGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALE 60
M L LL+A+PLL+ ++ RG AHYEM+G CRM+CDP+ P G PGP A
Sbjct: 1 MVLLLLVAIPLLVHSS-RGPAHYEMLGRCRMVCDPH--GPRG---------PGPDGAPAS 48
Query: 61 VMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQ 120
V PPF G KG+ GR GK G RGPPG PPGPRGPPGE G G PG PG
Sbjct: 49 V---------PPFPPGAKGEVGRRGKAGLRGPPG---PPGPRGPPGEPGRPGPPGPPG-- 94
Query: 121 LTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDV 180
G G V AG P+IAFY GL+ PHEGYEVL+FDDV
Sbjct: 95 ------PGPGGVAPAAGYV-----------------PRIAFYAGLRRPHEGYEVLRFDDV 131
Query: 181 VTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQ 240
VTN+GN Y+ +GKF+C + G+YFF YH+LMRGGDGTSMWADL KNGQVRASAIAQDADQ
Sbjct: 132 VTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDADQ 191
Query: 241 NYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
NYDYASNSV+LHLD GDEV++KLDGGK HGGN NKYSTFSGF++YPD
Sbjct: 192 NYDYASNSVILHLDVGDEVFIKLDGGKVHGGNTNKYSTFSGFIIYPD 238
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 130 bits (326), Expect = 2e-30
Identities = 92/250 (36%), Positives = 124/250 (49%), Gaps = 35/250 (14%)
Query: 45 PGAKAQP--PGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPR 102
PG K +P PGP P GP G PG PG PG GPPG PGPPGP
Sbjct: 480 PGLKGEPGLPGPPG---------EGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPP 530
Query: 103 GPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGA---GVGGDSEGEVTSALSATFSGPKI 159
G PG ++ G+ GL L G G + GG G+ G+ T A +A + P
Sbjct: 531 GAPGAFDET---GIAGLHLPNGGVEGAVLGKGGKPQFGL-GELSAHATPAFTAVLTSP-- 584
Query: 160 AFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSM 219
P G V KFD + N + Y+P TG F+C V G+Y+F YH+ ++ GT++
Sbjct: 585 -------FPASGMPV-KFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVK---GTNV 633
Query: 220 WADLCKNGQVRASAIAQDADQNY-DYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKY-- 276
W L KN V A+ + + Y D AS VL L D+V+V++ +A+G + +Y
Sbjct: 634 WVALYKN-NVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIH 692
Query: 277 STFSGFLLYP 286
S+FSGFLL P
Sbjct: 693 SSFSGFLLCP 702
Score = 73.2 bits (178), Expect = 3e-13
Identities = 47/115 (40%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 42 GEPPG--------AKAQPPGPSTAALEVMQDLSANPPPPFI---QGPKGDPGRPGKPGPR 90
G PPG + PPGP A P P I QGP G G+PG PG R
Sbjct: 357 GGPPGLPGSAGLPGRRGPPGPKGEA-----GPGGPPGVPGIRGDQGPSGLAGKPGVPGER 411
Query: 91 GPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG-----GGAGVGG 140
G PG GPPGP GP GE G +GRPG PG+ G +G+ G G +G+ G
Sbjct: 412 GLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPG 466
Score = 70.5 bits (171), Expect = 2e-12
Identities = 50/136 (36%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 14 QAAPRGAAHYEMMGTCRMICDPYTAAPGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPF 73
Q P G + MG P P G+P G + +P + Q L P PP
Sbjct: 110 QPGPAGPPGFSRMGKAGPPGLPGKVGPPGQP-GLRGEP------GIRGDQGLRGPPGPPG 162
Query: 74 IQGPKGD--PGRPGKPGPRGPPGEPGPPGPRGPPGEKGDS--------GRPGLPGLQLTA 123
+ GP G PG+PG G GPPG G PGP+G PG GD G+PGLPG
Sbjct: 163 LPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAP-GQ 221
Query: 124 GTASGVGVVGGGAGVG 139
G A G + G AG+G
Sbjct: 222 GGAPGPPGLPGPAGLG 237
Score = 65.5 bits (158), Expect = 5e-11
Identities = 45/118 (38%), Positives = 53/118 (44%), Gaps = 39/118 (33%)
Query: 33 CDPYTAAPGGEPPGAKAQPPGPSTAALEVMQDLSANPP-PPFIQGP-------------- 77
C P A+ GG GA P ++ +Q + P PPF +G
Sbjct: 22 CGP-RASSGGGAGGAAGYAP------VKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMD 74
Query: 78 -KGDPGRPGKPGPRGPPGEP--------------GPPGPRGPPG--EKGDSGRPGLPG 118
KG+PG PGKPGPRGPPG P G PGP GPPG G +G PGLPG
Sbjct: 75 LKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPG 132
Score = 63.5 bits (153), Expect = 2e-10
Identities = 44/114 (38%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 36 YTAAPGGEPPGAKAQP-----PGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPR 90
+ PG PG QP PG S L PP G +G+PG G G R
Sbjct: 96 FPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR 155
Query: 91 GPPGEPGPPGPRGP--PGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGVGGDS 142
GPPG PG PGP G PG+ G G PG PG Q G G G G+ GD+
Sbjct: 156 GPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPG-PPGDRGLKGDN 208
Score = 62.8 bits (151), Expect = 3e-10
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 32/159 (20%)
Query: 40 PGGE-PPGAKAQPP--------GPSTAALEVMQDLSANPPP---PFIQGPKGDPGRPGKP 87
PG + P GAK +P GP+ + + + P P + G +G+PG G+P
Sbjct: 289 PGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEP 348
Query: 88 GPRGP---------PGEPGPPGPRGPPGEKGDS---GRPGLPGL---QLTAGTASGVGVV 132
G +GP PG G PG RGPPG KG++ G PG+PG+ Q +G A GV
Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVP 408
Query: 133 G-----GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLK 166
G G G G + + + GP +A +G K
Sbjct: 409 GERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQK 447
Score = 58.5 bits (140), Expect = 6e-09
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 42 GEP--PGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPP 99
G+P PGA Q P L P P G G G PG PG +G G PG P
Sbjct: 211 GQPGLPGAPGQGGAPGPPGL----------PGPAGLGKPGLDGLPGAPGDKGESGPPGVP 260
Query: 100 GPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGVGGD 141
GPRG PG G G PG+ G+ + A+G+ G +G G+
Sbjct: 261 GPRGEPGAVGPKGPPGVDGVGVPG--AAGLPGPQGPSGAKGE 300
Score = 58.5 bits (140), Expect = 6e-09
Identities = 47/132 (35%), Positives = 54/132 (40%), Gaps = 25/132 (18%)
Query: 34 DPYTAAPGGEP-------PGAKAQPPGPSTAALEVMQDLSANPPP---------PFIQGP 77
+P P G P PGA A PGP + + + PP P + GP
Sbjct: 265 EPGAVGPKGPPGVDGVGVPGA-AGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGP 323
Query: 78 KGDPGRPGKPG---PRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGG 134
KGD G G PG RG PGE G PG +GP G G G PG GL G G G
Sbjct: 324 KGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGP 383
Query: 135 GA-----GVGGD 141
G G+ GD
Sbjct: 384 GGPPGVPGIRGD 395
Score = 50.4 bits (119), Expect = 2e-06
Identities = 34/73 (46%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 72 PFIQGPKGDPGRPGK------PGPRGP---PGEPGPP---GPRGPPGEKGDSGRPGL--P 117
P +GP G P R GK P P P GEPGPP GPRGPPG G G+PG+ P
Sbjct: 46 PMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKP 105
Query: 118 GLQLTAGTASGVG 130
GL G A G
Sbjct: 106 GLHGQPGPAGPPG 118
Score = 30.0 bits (66), Expect = 2.4
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 83 RPGKPGPRGPPGEPGP------PGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGG 135
+P + GP GPP G P P P KG+ G PG PG + G G G G
Sbjct: 45 QPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMG 103
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 129 bits (324), Expect = 3e-30
Identities = 97/281 (34%), Positives = 129/281 (45%), Gaps = 47/281 (16%)
Query: 40 PG-GEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGP------ 92
PG G PPG P GP+ A P GP+G PG PG GP GP
Sbjct: 412 PGVGGPPGLPG-PVGPAGA--------KGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGF 462
Query: 93 ------PGEPGPPGPR--------------GPPGEKGDSGRPGLPGLQLTAGTASGVGVV 132
PG PGPPGP GPPG +G SG PGLPG G G V+
Sbjct: 463 PGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPG-PPGQAVM 521
Query: 133 GGGAGVGGD----SEGEVTSALSATFSGPKIAFYVGLKSPHEGYEV-LKFDDVVTNLGNH 187
G G S + SA P AF V L + + FD ++ N H
Sbjct: 522 PEGFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQH 581
Query: 188 YDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASN 247
YDP TG F+CQ+ GIY+F+YH+ ++ GT +W L KNG + D AS
Sbjct: 582 YDPRTGIFTCQIPGIYYFSYHVHVK---GTHVWVGLYKNGTPVMYTYDEYTKGYLDQASG 638
Query: 248 SVVLHLDSGDEVYVKLDGGKAHGGNNNKY--STFSGFLLYP 286
S ++ L D+V+++L +++G +++Y S+FSGFL+ P
Sbjct: 639 SAIIDLTENDQVWLQLPNAESNGLYSSEYVHSSFSGFLVAP 679
Score = 74.3 bits (181), Expect = 1e-13
Identities = 45/110 (40%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 35 PYTAAPGGEP----PGAKAQP-----PGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPG 85
P + P G+P PG + +P PGPS + L P GPKGD G G
Sbjct: 74 PGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAG 133
Query: 86 KPGPRGPPGEPGPPGPRG--PPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
PGPRGPPG PG PGP G PG+ G G G PG + G GV G
Sbjct: 134 LPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPG 183
Score = 67.8 bits (164), Expect = 1e-11
Identities = 38/85 (44%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 35 PYTAAPGGEP-PGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPP 93
P A P G P P PG + L+ L PP P G G PG PGKPG RGP
Sbjct: 65 PGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPG-PPGPSAVGKPGVPGLPGKPGERGPY 123
Query: 94 GEPGPPGPRGPPGEKGDSGRPGLPG 118
G G GP G PG +G G PG+PG
Sbjct: 124 GPKGDVGPAGLPGPRGPPGPPGIPG 148
Score = 67.4 bits (163), Expect = 1e-11
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 38 AAPGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRP---GKPGPRGPPG 94
A P G P GAK + P + P P + GPKG+PG P G PG GPPG
Sbjct: 367 AGPAGYP-GAKGERGSPGS------DGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPG 419
Query: 95 EPGPPGP---RGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
PGP GP +G PG G++G G PG+ T G G+ G
Sbjct: 420 LPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPG 461
Score = 65.5 bits (158), Expect = 5e-11
Identities = 39/109 (35%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 46 GAKAQPPGPSTAALEVMQDLSANPPPPFI-----------QGPKGDPGRPGKPGPRGPPG 94
GA QP P T L ++ P PP +GP G PG PG G +GP G
Sbjct: 270 GAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAG 329
Query: 95 EPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGVGGDSE 143
PG PG GPPG G G G+PG G G G G E
Sbjct: 330 LPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGE 378
Score = 65.5 bits (158), Expect = 5e-11
Identities = 48/109 (44%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 40 PGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPP 99
PGG PGAK + GP A L L+ P QGPKG PG G PGP+G E GP
Sbjct: 316 PGG--PGAKGEQ-GP--AGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKG---ETGPA 367
Query: 100 GPRGPPGEKGD------SGRPGLPGLQLTAGTASGVGVVG--GGAGVGG 140
GP G PG KG+ G+PG PG G G+ G G GVGG
Sbjct: 368 GPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGG 416
Score = 63.9 bits (154), Expect = 2e-10
Identities = 43/114 (37%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 39 APGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGP 98
APG P GP+ + PP +G G PG+PG G RG PGE GP
Sbjct: 195 APGRPGERGLPGPQGPTGPS---------GPPGVGKRGENGVPGQPGIKGDRGFPGEMGP 245
Query: 99 ---PGPRGPPGEKGD--------SGRPGLPGLQLTAGTASGVGVVG--GGAGVG 139
PGP+GPPGE+G +G PG PG+ T G G+ G G G G
Sbjct: 246 IGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFG 299
Score = 62.4 bits (150), Expect = 4e-10
Identities = 43/109 (39%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 39 APG-GEPPGAKAQPPG---PSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPG 94
APG PPG PPG P L+ + + P P +G +G G PGKPG GPPG
Sbjct: 286 APGIAGPPG----PPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341
Query: 95 EPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGVGGDSE 143
GP GP+G PG G G G G AG A G G G D +
Sbjct: 342 NMGPQGPKGIPGSHGLPGPKGETG---PAGPAGYPGAKGERGSPGSDGK 387
Score = 59.3 bits (142), Expect = 4e-09
Identities = 34/71 (47%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 PFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGV 131
P +G +G PG GKPG G PG GP G G PG KGD G G PGL G A G+
Sbjct: 373 PGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGM 432
Query: 132 VG--GGAGVGG 140
G G AG G
Sbjct: 433 PGHNGEAGPRG 443
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/75 (44%), Positives = 34/75 (45%), Gaps = 25/75 (33%)
Query: 69 PPPPFIQGPKGDPG-----------------RPGKPGPRGP--------PGEPGPPGPRG 103
P PP GP+G PG PG PGP GP PG PG PG RG
Sbjct: 62 PGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERG 121
Query: 104 PPGEKGDSGRPGLPG 118
P G KGD G GLPG
Sbjct: 122 PYGPKGDVGPAGLPG 136
Score = 56.2 bits (134), Expect = 3e-08
Identities = 25/43 (58%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 78 KGDPGRPGKPGPRGPPGEPGPPGPRGPP--GEKGDSGRPGLPG 118
+G+ G PG PGP GP G PGP GP G P G G G PGLPG
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPG 98
Score = 54.7 bits (130), Expect = 9e-08
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGP--RGPPGEKGDSGRPGLPG 118
++G +G PG PG GPRG PG GPPG G PG +G+ G PG PG
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPG 101
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 129 bits (323), Expect = 4e-30
Identities = 84/233 (36%), Positives = 115/233 (49%), Gaps = 21/233 (9%)
Query: 65 LSANPPP--PFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLT 122
LS PP P I G G PG G+PG G GE G PG G GE G+ G PG+PG
Sbjct: 29 LSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGLPGLAGDHGEFGEKGDPGIPGNPGK 88
Query: 123 AGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVG--LKSPHEGYEVLKFDDV 180
G +G GG G + AT KIAF + P + ++FD V
Sbjct: 89 VGPKGPMGPKGGPGAPGAPGPKGESGDYKAT---QKIAFSATRTINVPLRRDQTIRFDHV 145
Query: 181 VTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKN---GQVRASAIAQD 237
+TN+ N+Y+P +GKF+C+V G+Y+FTYH RG +LC N G+ RA +
Sbjct: 146 ITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRG--------NLCVNLMRGRERAQKVVTF 197
Query: 238 ADQNYD---YASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
D Y+ + +VL L+ G+ V+++ + G S FSGFLL+PD
Sbjct: 198 CDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSIFSGFLLFPD 250
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 122 bits (307), Expect = 3e-28
Identities = 82/218 (37%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGG 134
QG KG+ G G GP GP G GP GP G PG G G+PG G G GV G
Sbjct: 121 QGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGI 180
Query: 135 GAGVGGDSEGEVTSALSATFSGPKIAFYVGL----KSPHEGYEVLKFDDVVTNLGNHYDP 190
G E + T PK AF VGL K P + KFD ++ N NHYD
Sbjct: 181 RGWKGDRGE---KGKIGETLVLPKSAFTVGLTVLSKFPSSDVPI-KFDKILYNEFNHYDT 236
Query: 191 TTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVV 250
GKF+C + G+Y+FTYHI + ++ L KNG V+ + D AS S+V
Sbjct: 237 AVGKFTCHIAGVYYFTYHITV---FSRNVQVSLVKNG-VKILHTRDAYVSSEDQASGSIV 292
Query: 251 LHLDSGDEVYVKLDGGKAHGG---NNNKYSTFSGFLLY 285
L L GDE+++++ GG+ G + + +TF+GFLL+
Sbjct: 293 LQLKLGDEMWLQVTGGERFNGLFADEDDDTTFTGFLLF 330
Score = 51.2 bits (121), Expect = 1e-06
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 78 KGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG--GG 135
+G PG PG PG G PG G G +G G+ G+ G PG PG T+G G G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEA 84
Query: 136 AGVGGD 141
G+ GD
Sbjct: 85 KGIKGD 90
Score = 46.6 bits (109), Expect = 3e-05
Identities = 27/65 (41%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGE------KGDSGRPGLPGLQLTAGTASG 128
+G KGD G PG PG G G G G RG G+ KGD G G PG G A
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGP 108
Query: 129 VGVVG 133
+G G
Sbjct: 109 MGEKG 113
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 68 NPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTAS 127
+P P G G PGR G+ G +G G+ G PG G PG+ G SG G G G
Sbjct: 27 HPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGAD---GKVE 83
Query: 128 GVGVVG 133
G+ G
Sbjct: 84 AKGIKG 89
Score = 42.0 bits (97), Expect = 6e-04
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 65 LSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPG 115
+ NP + G G G G G G PG PG PG G GEKG+ G G
Sbjct: 30 IPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80
Score = 41.6 bits (96), Expect = 8e-04
Identities = 32/83 (38%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 80 DPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGR---PGLPGLQLTAGTASGVGVVGGGA 136
D R G PG G PG G PG G G KGD G PG PG GT+ G G
Sbjct: 21 DTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80
Query: 137 GVGGDS-EGEVTSALSATFSGPK 158
V +G+ S S GPK
Sbjct: 81 KVEAKGIKGDQGSRGSPGKHGPK 103
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 122 bits (306), Expect = 4e-28
Identities = 82/218 (37%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGG 134
QG KG+ G G GP GP G GP GP G PG G G+PG G G GV G
Sbjct: 121 QGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGI 180
Query: 135 GAGVGGDSEGEVTSALSATFSGPKIAFYVGL----KSPHEGYEVLKFDDVVTNLGNHYDP 190
G E + T PK AF VGL K P + KFD ++ N NHYD
Sbjct: 181 RGWKGDRGE---KGKIGETLVLPKSAFTVGLTVLSKFPSSDMPI-KFDKILYNEFNHYDT 236
Query: 191 TTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVV 250
GKF+C + G+Y+FTYHI + ++ L KNG V+ + D AS +V
Sbjct: 237 AAGKFTCHIAGVYYFTYHITV---FSRNVQVSLVKNG-VKILHTKDAYMSSEDQASGGIV 292
Query: 251 LHLDSGDEVYVKLDGGKAHGG---NNNKYSTFSGFLLY 285
L L GDEV++++ GG+ G + + +TF+GFLL+
Sbjct: 293 LQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLF 330
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 78 KGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG--GG 135
+G PG PG PG G PG G G +G G+ G+ GRPG PG T+G G G
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEA 84
Query: 136 AGVGGD 141
G+ GD
Sbjct: 85 KGIKGD 90
Score = 48.5 bits (114), Expect = 7e-06
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGE------KGDSGRPGLPGLQLTAGTASG 128
+G KGD G PG+PG G G G G RG G+ KGD G G PG G A
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGP 108
Query: 129 VGVVG 133
+G G
Sbjct: 109 MGEKG 113
Score = 45.1 bits (105), Expect = 7e-05
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 68 NPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTAS 127
+P P G G PGR G+ G +G G+ G PG G PG+ G SG G G G
Sbjct: 27 HPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGAD---GKVE 83
Query: 128 GVGVVG 133
G+ G
Sbjct: 84 AKGIKG 89
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 65 LSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPG 115
+ NP + G G G G G G PG PG PG G GEKG+ G G
Sbjct: 30 IPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80
Score = 41.2 bits (95), Expect = 0.001
Identities = 32/83 (38%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 80 DPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGR---PGLPGLQLTAGTASGVGVVGGGA 136
D R G PG G PG G PG G G KGD G PG PG GT+ G G
Sbjct: 21 DTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80
Query: 137 GVGGDS-EGEVTSALSATFSGPK 158
V +G+ S S GPK
Sbjct: 81 KVEAKGIKGDQGSRGSPGKHGPK 103
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 120 bits (300), Expect = 2e-27
Identities = 96/300 (32%), Positives = 129/300 (43%), Gaps = 61/300 (20%)
Query: 44 PPGAKAQPPGPSTAALEVMQD-LSANPPPPFIQGPKGDPGRPGKPGPRGPPGEP---GPP 99
PPG + P GP E Q + P P + GPKG+PG PG G +GPPG P GP
Sbjct: 448 PPGMRGLP-GPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPS 506
Query: 100 GPRGPPGEKGDSGRPGLPGLQLTAGTAS-GVGVVGGGAGVGG------------------ 140
GP GPPG G G PGLPG G GV + G G G
Sbjct: 507 GPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPG 566
Query: 141 ------------DSEGEVTSALSATFSGPKIAFYVGLKSPHEG---YEV----------- 174
+GE + G K G K G YE+
Sbjct: 567 PPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPF 626
Query: 175 ------LKFDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQ 228
+KF+ ++ N +Y+P TG F+C+V G+Y+F YH+ +GG ++W L KN +
Sbjct: 627 PPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGG---NVWVALFKNNE 683
Query: 229 VRASAIAQDADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKY--STFSGFLLYP 286
+ D AS S VL L GD V++++ +A G +Y S+FSG+LLYP
Sbjct: 684 PVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYP 743
Score = 65.5 bits (158), Expect = 5e-11
Identities = 50/125 (40%), Positives = 55/125 (44%), Gaps = 21/125 (16%)
Query: 39 APG-GEPPGAKAQP--PGP----STAALEVMQDLSANPPPPFIQGPKGDPGR---PGKPG 88
APG G PPG P PGP + P GPKG+PG PGKPG
Sbjct: 382 APGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPG 441
Query: 89 ---PRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG--------GGAG 137
GPPG G PGP GP GE G G PGLPG+ G G+ G G G
Sbjct: 442 FLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPG 501
Query: 138 VGGDS 142
+GG S
Sbjct: 502 IGGPS 506
Score = 64.7 bits (156), Expect = 9e-11
Identities = 36/81 (44%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 72 PFIQGPKGDPGRPGKPGPRGPPGE---PGPPG------PRGPPGEKGDSGRPGLPGLQLT 122
P I GP G+PG PG PGP GPPG PGP G P+GPPG KG+ G G PG
Sbjct: 383 PGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF 442
Query: 123 AGTASGVGVVGGGAGVGGDSE 143
G G+ G +G E
Sbjct: 443 LGEVGPPGMRGLPGPIGPKGE 463
Score = 61.2 bits (147), Expect = 1e-09
Identities = 41/108 (37%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 40 PGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQG--------PKGDPGRPGKPGPRG 91
PG PG P P + Q L P PP + G PKGD G G PG G
Sbjct: 313 PGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALG 372
Query: 92 PPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGVG 139
P GE GP G G G G+ G PG+PG G G G G VG
Sbjct: 373 PRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG 420
Score = 60.5 bits (145), Expect = 2e-09
Identities = 36/72 (50%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 76 GPKGDPGRPGKPGP---RGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVV 132
G G PG PG+PGP RGP G PGP G RGP G+KG G PG PG++ G G V
Sbjct: 208 GKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGVKGPPGMHGPPGPV 266
Query: 133 G----GGAGVGG 140
G G GV G
Sbjct: 267 GLPGVGKPGVTG 278
Score = 59.3 bits (142), Expect = 4e-09
Identities = 34/82 (41%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 39 APGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGP 98
APG + P PPGP ++ P P G G PG PG GP G PG GP
Sbjct: 250 APGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGP 309
Query: 99 PG--PRGPPGEKGDSGRPGLPG 118
PG G PG+ G G+PG PG
Sbjct: 310 PGIPGIGKPGQDGIPGQPGFPG 331
Score = 59.3 bits (142), Expect = 4e-09
Identities = 35/84 (41%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 71 PPFIQGPKGDPGRPGK--------PGPRGP---PGEPGPPGPRGPPGEKGDSGRPGLPGL 119
PP + GP G G PG PGP+GP PG PG PGP+GP G G G PG+PG+
Sbjct: 256 PPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGI 315
Query: 120 QLTAGTASGVGVVGGGAGVGGDSE 143
G G+ G GG E
Sbjct: 316 ----GKPGQDGIPGQPGFPGGKGE 335
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 75 QGPKGDPGRPGKPGPRGPPGE-----PGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGV 129
QGP+G+PG G PGP G PG G PGP+G PG G G PG+PG G
Sbjct: 120 QGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPG-VGKPGMPGMPGKPGAMGMPGAK 178
Query: 130 GVVGGGAGVG 139
G +G +G
Sbjct: 179 GEIGQKGEIG 188
Score = 55.1 bits (131), Expect = 7e-08
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 40 PGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGP- 98
P GEP PPGP + + P GP+G PG GKPG G PG+PG
Sbjct: 122 PRGEP--GPRGPPGPPGLPGHGIPGIKGKP------GPQGYPG-VGKPGMPGMPGKPGAM 172
Query: 99 --PGPRGPPGEKGDSGRPGLPGLQLTAGT--ASGVGVVGG 134
PG +G G+KG+ G G+PG Q G G+G GG
Sbjct: 173 GMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGG 212
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 78 KGDPGRPGKPGPRGPPGEPGPPGP-----RGPPGEKG--DSGRPGLPGLQLTAGTASGVG 130
+G+ G G+PGPRGPPG PG PG +G PG +G G+PG+PG+ G +G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGM---PGKPGAMG 173
Query: 131 VVGGGAGVGGDSE 143
+ G +G E
Sbjct: 174 MPGAKGEIGQKGE 186
Score = 53.1 bits (126), Expect = 3e-07
Identities = 42/115 (36%), Positives = 48/115 (41%), Gaps = 20/115 (17%)
Query: 45 PGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPG--PRGPPGEPGP---- 98
PG + PPG + P P +G +G PG PG PG G PG PGP
Sbjct: 304 PGVQG-PPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDR 362
Query: 99 -----PGPRGPPGEKGDSGRPGL------PGLQLTAGTASGVGVVG--GGAGVGG 140
PG GP GEKG G PG+ PGL G G +G G G GG
Sbjct: 363 GMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGG 417
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 120 bits (300), Expect = 2e-27
Identities = 96/300 (32%), Positives = 129/300 (43%), Gaps = 61/300 (20%)
Query: 44 PPGAKAQPPGPSTAALEVMQD-LSANPPPPFIQGPKGDPGRPGKPGPRGPPGEP---GPP 99
PPG + P GP E Q + P P + GPKG+PG PG G +GPPG P GP
Sbjct: 448 PPGMRGLP-GPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPS 506
Query: 100 GPRGPPGEKGDSGRPGLPGLQLTAGTAS-GVGVVGGGAGVGG------------------ 140
GP GPPG G G PGLPG G GV + G G G
Sbjct: 507 GPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPG 566
Query: 141 ------------DSEGEVTSALSATFSGPKIAFYVGLKSPHEG---YEV----------- 174
+GE + G K G K G YE+
Sbjct: 567 PPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPF 626
Query: 175 ------LKFDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQ 228
+KF+ ++ N +Y+P TG F+C+V G+Y+F YH+ +GG ++W L KN +
Sbjct: 627 PPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGG---NVWVALFKNNE 683
Query: 229 VRASAIAQDADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKY--STFSGFLLYP 286
+ D AS S VL L GD V++++ +A G +Y S+FSG+LLYP
Sbjct: 684 PVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYP 743
Score = 65.5 bits (158), Expect = 5e-11
Identities = 50/125 (40%), Positives = 55/125 (44%), Gaps = 21/125 (16%)
Query: 39 APG-GEPPGAKAQP--PGP----STAALEVMQDLSANPPPPFIQGPKGDPGR---PGKPG 88
APG G PPG P PGP + P GPKG+PG PGKPG
Sbjct: 382 APGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPG 441
Query: 89 ---PRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG--------GGAG 137
GPPG G PGP GP GE G G PGLPG+ G G+ G G G
Sbjct: 442 FLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPG 501
Query: 138 VGGDS 142
+GG S
Sbjct: 502 IGGPS 506
Score = 64.7 bits (156), Expect = 9e-11
Identities = 36/81 (44%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 72 PFIQGPKGDPGRPGKPGPRGPPGE---PGPPG------PRGPPGEKGDSGRPGLPGLQLT 122
P I GP G+PG PG PGP GPPG PGP G P+GPPG KG+ G G PG
Sbjct: 383 PGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGF 442
Query: 123 AGTASGVGVVGGGAGVGGDSE 143
G G+ G +G E
Sbjct: 443 LGEVGPPGMRGLPGPIGPKGE 463
Score = 61.2 bits (147), Expect = 1e-09
Identities = 41/108 (37%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 40 PGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQG--------PKGDPGRPGKPGPRG 91
PG PG P P + Q L P PP + G PKGD G G PG G
Sbjct: 313 PGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVPGALG 372
Query: 92 PPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGVG 139
P GE GP G G G G+ G PG+PG G G G G VG
Sbjct: 373 PRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG 420
Score = 60.5 bits (145), Expect = 2e-09
Identities = 36/72 (50%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 76 GPKGDPGRPGKPGP---RGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVV 132
G G PG PG+PGP RGP G PGP G RGP G+KG G PG PG++ G G V
Sbjct: 208 GKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKG-FGMPGAPGVKGPPGMHGPPGPV 266
Query: 133 G----GGAGVGG 140
G G GV G
Sbjct: 267 GLPGVGKPGVTG 278
Score = 59.3 bits (142), Expect = 4e-09
Identities = 34/82 (41%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 39 APGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGP 98
APG + P PPGP ++ P P G G PG PG GP G PG GP
Sbjct: 250 APGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGP 309
Query: 99 PG--PRGPPGEKGDSGRPGLPG 118
PG G PG+ G G+PG PG
Sbjct: 310 PGIPGIGKPGQDGIPGQPGFPG 331
Score = 59.3 bits (142), Expect = 4e-09
Identities = 35/84 (41%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 71 PPFIQGPKGDPGRPGK--------PGPRGP---PGEPGPPGPRGPPGEKGDSGRPGLPGL 119
PP + GP G G PG PGP+GP PG PG PGP+GP G G G PG+PG+
Sbjct: 256 PPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGI 315
Query: 120 QLTAGTASGVGVVGGGAGVGGDSE 143
G G+ G GG E
Sbjct: 316 ----GKPGQDGIPGQPGFPGGKGE 335
Score = 56.2 bits (134), Expect = 3e-08
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 75 QGPKGDPGRPGKPGPRGPPGE-----PGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGV 129
QGP+G+PG G PGP G PG G PGP+G PG G G PG+PG G
Sbjct: 120 QGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPG-VGKPGMPGMPGKPGAMGMPGAK 178
Query: 130 GVVGGGAGVG 139
G +G +G
Sbjct: 179 GEIGQKGEIG 188
Score = 55.1 bits (131), Expect = 7e-08
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 40 PGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGP- 98
P GEP PPGP + + P GP+G PG GKPG G PG+PG
Sbjct: 122 PRGEP--GPRGPPGPPGLPGHGIPGIKGKP------GPQGYPG-VGKPGMPGMPGKPGAM 172
Query: 99 --PGPRGPPGEKGDSGRPGLPGLQLTAGT--ASGVGVVGG 134
PG +G G+KG+ G G+PG Q G G+G GG
Sbjct: 173 GMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGG 212
Score = 54.3 bits (129), Expect = 1e-07
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 78 KGDPGRPGKPGPRGPPGEPGPPGP-----RGPPGEKG--DSGRPGLPGLQLTAGTASGVG 130
+G+ G G+PGPRGPPG PG PG +G PG +G G+PG+PG+ G +G
Sbjct: 117 RGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGM---PGKPGAMG 173
Query: 131 VVGGGAGVGGDSE 143
+ G +G E
Sbjct: 174 MPGAKGEIGQKGE 186
Score = 53.1 bits (126), Expect = 3e-07
Identities = 42/115 (36%), Positives = 48/115 (41%), Gaps = 20/115 (17%)
Query: 45 PGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPG--PRGPPGEPGP---- 98
PG + PPG + P P +G +G PG PG PG G PG PGP
Sbjct: 304 PGVQG-PPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDR 362
Query: 99 -----PGPRGPPGEKGDSGRPGL------PGLQLTAGTASGVGVVG--GGAGVGG 140
PG GP GEKG G PG+ PGL G G +G G G GG
Sbjct: 363 GMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGG 417
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 117 bits (292), Expect = 2e-26
Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 34/272 (12%)
Query: 27 GTCRMICD-PYTAAPGGEPPGAKAQPPGPSTA-------ALEVMQDLSANPPPPFIQGPK 78
G+ +++C P P G PPGA PGPS + + +GP
Sbjct: 75 GSPQLVCSLPGPQGPPG-PPGA----PGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPP 129
Query: 79 GDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGGGAGV 138
G G GKPGP+G G G GPRGP G G G+ G PG + G G+ G +
Sbjct: 130 GRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPGPCSCG 189
Query: 139 GGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGKFSCQ 198
G ++ + A++ ++ ++ +KFD ++ N G HY+ ++GKF C
Sbjct: 190 SGHTKSAFSVAVTKSYPRERLP--------------IKFDKILMNEGGHYNASSGKFVCG 235
Query: 199 VRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHLDSGDE 258
V GIY+FTY I + + L NGQ R + N+D AS S +L L GDE
Sbjct: 236 VPGIYYFTYDITLA---NKHLAIGLVHNGQYRIRTFDANTG-NHDVASGSTILALKQGDE 291
Query: 259 VYVKLDGGKAHGGNNNKY---STFSGFLLYPD 287
V++++ + +G + Y S F+GFL+Y D
Sbjct: 292 VWLQIFYSEQNGLFYDPYWTDSLFTGFLIYAD 323
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 115 bits (288), Expect = 4e-26
Identities = 84/243 (34%), Positives = 118/243 (48%), Gaps = 37/243 (15%)
Query: 52 PGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDS 111
P P A M + +P G G PGR G+ G G GE G PG GP G+ G++
Sbjct: 30 PLPKGACTGWMAGIPGHP------GHNGAPGRDGRDGTPGEKGEKGDPGLIGPKGDIGET 83
Query: 112 GRPGLPGLQLTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKS---- 167
G PG G + G G G GA V + AF VGL++
Sbjct: 84 GVPGAEGPRGFPGIQGRKGEPGEGAYV------------------YRSAFSVGLETYVTI 125
Query: 168 PHEGYEVLKFDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNG 227
P+ ++F + N NHYD +TGKF C + G+Y+F YHI + D + L K
Sbjct: 126 PN---MPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKD---VKVSLFKKD 179
Query: 228 QVRASAIAQDADQNYDYASNSVVLHLDSGDEVYVKLDG-GKAHG--GNNNKYSTFSGFLL 284
+ Q + N D AS SV+LHL+ GD+V++++ G G+ +G +N+ STF+GFLL
Sbjct: 180 KAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADNDNDSTFTGFLL 239
Query: 285 YPD 287
Y D
Sbjct: 240 YHD 242
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 114 bits (284), Expect = 1e-25
Identities = 96/279 (34%), Positives = 118/279 (42%), Gaps = 54/279 (19%)
Query: 30 RMICD-PYTAAPGGEPPGAKAQPPGPSTAAL---------------EVMQDLSANPPPPF 73
R IC P P G PPGA P L + L P
Sbjct: 31 RYICSIPGLPGPPG-PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 89
Query: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
+ G KGD G GK GP GP GE G GP GPPG KGD G G PGL GV
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP---------GVCR 140
Query: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKS--PHEGYEVLKFDDVVTNLGNHYDPT 191
G+ V K AF VG+ + P E ++ F+ V+ N G HY+P
Sbjct: 141 CGSIV------------------LKSAFSVGITTSYPEERLPII-FNKVLFNEGEHYNPA 181
Query: 192 TGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVL 251
TGKF C GIY+F+Y I + + L NGQ R + N+D AS S V+
Sbjct: 182 TGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVI 237
Query: 252 HLDSGDEVYVKL---DGGKAHGGNNNKYSTFSGFLLYPD 287
+L DEV++++ D S FSGFLLY D
Sbjct: 238 YLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 276
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 114 bits (284), Expect = 1e-25
Identities = 96/279 (34%), Positives = 118/279 (42%), Gaps = 54/279 (19%)
Query: 30 RMICD-PYTAAPGGEPPGAKAQPPGPSTAAL---------------EVMQDLSANPPPPF 73
R IC P P G PPGA P L + L P
Sbjct: 31 RYICSIPGLPGPPG-PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 89
Query: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
+ G KGD G GK GP GP GE G GP GPPG KGD G G PGL GV
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP---------GVCR 140
Query: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKS--PHEGYEVLKFDDVVTNLGNHYDPT 191
G+ V K AF VG+ + P E ++ F+ V+ N G HY+P
Sbjct: 141 CGSIV------------------LKSAFSVGITTSYPEERLPII-FNKVLFNEGEHYNPA 181
Query: 192 TGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVL 251
TGKF C GIY+F+Y I + + L NGQ R + N+D AS S V+
Sbjct: 182 TGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVI 237
Query: 252 HLDSGDEVYVKL---DGGKAHGGNNNKYSTFSGFLLYPD 287
+L DEV++++ D S FSGFLLY D
Sbjct: 238 YLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 276
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 114 bits (284), Expect = 1e-25
Identities = 96/279 (34%), Positives = 118/279 (42%), Gaps = 54/279 (19%)
Query: 30 RMICD-PYTAAPGGEPPGAKAQPPGPSTAAL---------------EVMQDLSANPPPPF 73
R IC P P G PPGA P L + L P
Sbjct: 38 RYICSIPGLPGPPG-PPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
Query: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
+ G KGD G GK GP GP GE G GP GPPG KGD G G PGL GV
Sbjct: 97 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLP---------GVCR 147
Query: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKS--PHEGYEVLKFDDVVTNLGNHYDPT 191
G+ V K AF VG+ + P E ++ F+ V+ N G HY+P
Sbjct: 148 CGSIV------------------LKSAFSVGITTSYPEERLPII-FNKVLFNEGEHYNPA 188
Query: 192 TGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVL 251
TGKF C GIY+F+Y I + + L NGQ R + N+D AS S V+
Sbjct: 189 TGKFICAFPGIYYFSYDITLA---NKHLAIGLVHNGQYRIKTFDANTG-NHDVASGSTVI 244
Query: 252 HLDSGDEVYVKL---DGGKAHGGNNNKYSTFSGFLLYPD 287
+L DEV++++ D S FSGFLLY D
Sbjct: 245 YLQPEDEVWLEIFFTDQNGLFSDPGWADSLFSGFLLYVD 283
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 113 bits (283), Expect = 2e-25
Identities = 75/224 (33%), Positives = 105/224 (46%), Gaps = 19/224 (8%)
Query: 69 PPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASG 128
P P + G G G G PGP+G PG P PG RGP G+KG+ G PG PG G G
Sbjct: 36 PGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMG-PPG 94
Query: 129 VGVVGGGAGVGGD--SEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGN 186
+ V G G+ G+ EG + F+ + P +++F+ V+TN
Sbjct: 95 MPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTR-----QTHQPPAPNSLIRFNAVLTNPQG 149
Query: 187 HYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLC---KNGQVRASAIAQDADQNYD 243
YD +TGKF+C+V G+Y+F YH S A+LC V+ +
Sbjct: 150 DYDTSTGKFTCKVPGLYYFVYH--------ASHTANLCVLLYRSGVKVVTFCGHTSKTNQ 201
Query: 244 YASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
S V+L L G+EV++ ++ G S FSGFLL+PD
Sbjct: 202 VNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLFPD 245
Score = 48.1 bits (113), Expect = 9e-06
Identities = 39/105 (37%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 3 LGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEP----PGAKAQPPGPSTAA 58
LGL + + LLL RG A+ G M P APG + PG K +P P+
Sbjct: 11 LGLKLLLLLLLLPL-RGQANTGCYGIPGMPGLP--GAPGKDGYDGLPGPKGEPGIPAIPG 67
Query: 59 LEVMQDLSANPP---PPFIQGPKGDPGRPGKPGPRGPPGEPGPPG 100
+ + P P GP G PG PG PGP G PGEPG G
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEG 112
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 113 bits (283), Expect = 2e-25
Identities = 75/224 (33%), Positives = 105/224 (46%), Gaps = 19/224 (8%)
Query: 69 PPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASG 128
P P + G G G G PGP+G PG P PG RGP G+KG+ G PG PG G G
Sbjct: 36 PGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMG-PPG 94
Query: 129 VGVVGGGAGVGGD--SEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGN 186
+ V G G+ G+ EG + F+ + P +++F+ V+TN
Sbjct: 95 MPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTR-----QTHQPPAPNSLIRFNAVLTNPQG 149
Query: 187 HYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLC---KNGQVRASAIAQDADQNYD 243
YD +TGKF+C+V G+Y+F YH S A+LC V+ +
Sbjct: 150 DYDTSTGKFTCKVPGLYYFVYH--------ASHTANLCVLLYRSGVKVVTFCGHTSKTNQ 201
Query: 244 YASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
S V+L L G+EV++ ++ G S FSGFLL+PD
Sbjct: 202 VNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSGFLLFPD 245
Score = 48.1 bits (113), Expect = 9e-06
Identities = 39/105 (37%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 3 LGLLIAVPLLLQAAPRGAAHYEMMGTCRMICDPYTAAPGGEP----PGAKAQPPGPSTAA 58
LGL + + LLL RG A+ G M P APG + PG K +P P+
Sbjct: 11 LGLKLLLLLLLLPL-RGQANTGCYGIPGMPGLP--GAPGKDGYDGLPGPKGEPGIPAIPG 67
Query: 59 LEVMQDLSANPP---PPFIQGPKGDPGRPGKPGPRGPPGEPGPPG 100
+ + P P GP G PG PG PGP G PGEPG G
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEG 112
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 109 bits (273), Expect = 2e-24
Identities = 83/223 (37%), Positives = 111/223 (49%), Gaps = 27/223 (12%)
Query: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG- 133
+G KGD G GK G G PG G PG +G EKG+ G PGL G G GV G
Sbjct: 265 KGSKGDSGMEGKSGRNGLPGAKGDPGIKG---EKGELGPPGLLGPTGPKGDIGNKGVRGP 321
Query: 134 ----GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEV-LKFDDVVTNLGNHY 188
G G G S+GE+ P+ AF GL P + +KF+ ++ N +Y
Sbjct: 322 TGKKGSRGFKG-SKGELARV-------PRSAFSAGLSKPFPPPNIPIKFEKILYNDQGNY 373
Query: 189 DPTTGKFSCQVRGIYFFTYHILMRGGDG-TSMWADLCKNGQVRASAIAQDADQNYDYASN 247
P TGKF+C + G Y F+YHI +RG S+ A K + R + Q+ DQ AS
Sbjct: 374 SPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQNKKQFKSRETLYGQEIDQ----ASL 429
Query: 248 SVVLHLDSGDEVYVKLDGGKAHGG---NNNKYSTFSGFLLYPD 287
V+L L +GD+V+ L+ K G + S F+GFLLYP+
Sbjct: 430 LVILKLSAGDQVW--LEVSKDWNGVYVSAEDDSIFTGFLLYPE 470
Score = 61.6 bits (148), Expect = 8e-10
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 29/137 (21%)
Query: 33 CDPYTAAPGGEPPGAKAQPPGPSTAALEVMQDLSANPPPPFIQGP------KGDPGRPGK 86
CD + PG + + PGP A + P PP + GP KG+ G G+
Sbjct: 102 CDCCSPVPGQKGEPGETGQPGPKGEAGNL-----GIPGPPGVVGPQGPRGYKGEKGLKGE 156
Query: 87 PGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQ------------LTAGTASGVGVVG- 133
G +G PG PG PG +G PG KGD G GL G++ T G G +G
Sbjct: 157 RGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGS 216
Query: 134 ----GGAGVGGDSEGEV 146
GG G G+ +GE+
Sbjct: 217 PGLHGGPGAKGE-KGEM 232
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 109 bits (272), Expect = 3e-24
Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGG 134
QGP G PG PG PG G G G G G GEKGD G G G + G G
Sbjct: 53 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY--- 109
Query: 135 GAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGK 194
G+ + + ++L+ FS + F V TN+GN +D TG+
Sbjct: 110 -PGIPPELQIAFMASLATHFSNQNSG--------------IIFSSVETNIGNFFDVMTGR 154
Query: 195 FSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHLD 254
F V G+YFFT+ +M+ D ++ L NG S + + D +SN VL L
Sbjct: 155 FGAPVSGVYFFTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLA 213
Query: 255 SGDEVYVKLDGGKAHGGNNNKYSTFSGFLLY 285
GDEV++++ G H G++ ++STF+GFLL+
Sbjct: 214 KGDEVWLRMGNGALH-GDHQRFSTFAGFLLF 243
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 109 bits (272), Expect = 3e-24
Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 75 QGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVGG 134
QGP G PG PG PG G G G G G GEKGD G G G + G G
Sbjct: 126 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGY--- 182
Query: 135 GAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGK 194
G+ + + ++L+ FS + F V TN+GN +D TG+
Sbjct: 183 -PGIPPELQIAFMASLATHFSNQNSG--------------IIFSSVETNIGNFFDVMTGR 227
Query: 195 FSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHLD 254
F V G+YFFT+ +M+ D ++ L NG S + + D +SN VL L
Sbjct: 228 FGAPVSGVYFFTFS-MMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLA 286
Query: 255 SGDEVYVKLDGGKAHGGNNNKYSTFSGFLLY 285
GDEV++++ G H G++ ++STF+GFLL+
Sbjct: 287 KGDEVWLRMGNGALH-GDHQRFSTFAGFLLF 316
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 108 bits (270), Expect = 5e-24
Identities = 82/229 (35%), Positives = 105/229 (45%), Gaps = 18/229 (7%)
Query: 65 LSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPG---PRGPPGEKGDSGRPGLPGLQL 121
L N P G G PG PG G +G PG G G G PGEKG+ GRPGLPG +
Sbjct: 19 LDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRG 78
Query: 122 TAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVV 181
G G G G G+ SA SA S ++ P L FD V+
Sbjct: 79 DPGPRGEAG-PAGPTGPAGECSVPPRSAFSAKRSESRV--------PPPSDAPLPFDRVL 129
Query: 182 TNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQN 241
N HYD TGKF+CQV G+Y+F H + S+ DL KNG+ AS
Sbjct: 130 VNEQGHYDAVTGKFTCQVPGVYYFAVHATVY---RASLQFDLVKNGESIASFFQFFGGWP 186
Query: 242 YDYA-SNSVVLHLDSGDEVYVKLDGGKAHG--GNNNKYSTFSGFLLYPD 287
+ S ++ L+ D+V+V++ G G + STFSGFL+Y D
Sbjct: 187 KPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSD 235
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 102 bits (253), Expect = 5e-22
Identities = 79/236 (33%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 75 QGPKGDPGRPGKPGPRGPP------GEPGPPGPR-------GPPGEKGDSGRPGLPGLQL 121
+ P G G G+PG RG P GEPG PG R G GE G SG PG G
Sbjct: 27 RAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPG 86
Query: 122 TAGTASGVGVVG--GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDD 179
+G G+ G G G G+ + + P+ AF ++P G V+ FD
Sbjct: 87 PSGPLGARGIPGIKGTKGSPGNIKDQ-----------PRPAFSAIRRNPPMGGNVVIFDT 135
Query: 180 VVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLC------KNGQVRASA 233
V+TN Y +G+F C V G Y+FT+ +L S W ++C GQVR S
Sbjct: 136 VITNQEEPYQNHSGRFVCTVPGYYYFTFQVL-------SQW-EICLSIVSSSRGQVRRSL 187
Query: 234 IAQDADQN--YDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKY-STFSGFLLYP 286
D + S +VL L GD+V+V+ D K H ++ S FSGFL++P
Sbjct: 188 GFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFSGFLIFP 243
>gi|32698861 cerebellin 2 precursor [Homo sapiens]
Length = 224
Score = 88.6 bits (218), Expect = 6e-18
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 11/153 (7%)
Query: 142 SEGEVTSAL--SATFSGPKIAFYVGLKSPHEGYEV------LKFDDVVTNLGNHYDPTTG 193
++G VTS+L S K+AF + HE E+ + FD V+ N+GNH+D +
Sbjct: 74 ADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASS 133
Query: 194 KFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHL 253
F +GIY F++H+ ++ + ++ L +NG SA A D D + ASN V+L +
Sbjct: 134 IFVAPRKGIYSFSFHV-VKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLM 192
Query: 254 DSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYP 286
+ D+V++KL+ G GG KYSTFSGFL++P
Sbjct: 193 EREDKVHLKLERGNLMGG--WKYSTFSGFLVFP 223
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 87.0 bits (214), Expect = 2e-17
Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 45/250 (18%)
Query: 53 GPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSG 112
G ++L++++D + GP G+ G PG PG +GPPG GPPG G G++G G
Sbjct: 791 GALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIG 850
Query: 113 RPGLPGLQLTAGTASGVGVVGGGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGY 172
PG G Q GV G V P++AF L P
Sbjct: 851 PPGPQGEQ----------------GVEGAPAAPV----------PQVAFSAALSLPRSEP 884
Query: 173 EVLKFDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQ---- 228
+ FD V+ N G +YDP TG F+ + G Y + ++ G + A L ++ Q
Sbjct: 885 GTVPFDRVLLNDGGYYDPETGVFTAPLAGRYLLS--AVLTGHRHEKVEAVLSRSNQGVAR 942
Query: 229 VRASAIAQDADQNYDYASN----------SVVLHLDSGDEVYVKLDGGK-AHGGNNNKYS 277
V + + +N A + S++L L +GD V V L G+ AH + +
Sbjct: 943 VDSGGYEPEGLENKPVAESQPSPGTLGVFSLILPLQAGDTVCVDLVMGQLAH--SEEPLT 1000
Query: 278 TFSGFLLYPD 287
FSG LLY D
Sbjct: 1001 IFSGALLYGD 1010
Score = 34.7 bits (78), Expect = 0.099
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 45 PGAKAQPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPR 102
P +A PPGP L+ + P P G +G G PG G +G G P P P+
Sbjct: 815 PAGEAGPPGPP--GLQGPPGPAGPPGSPGKDGQEGPIGPPGPQGEQGVEGAPAAPVPQ 870
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 85.1 bits (209), Expect = 6e-17
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 177 FDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQ 236
FD ++ NLG +D G+F+C V G Y F +H+L + ++ +L KN +V SA A
Sbjct: 1019 FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVN-VPLYVNLMKNEEVLVSAYAN 1077
Query: 237 DADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
D +++ ASN +L L GD+++++L G + G++ KYSTFSG+LLY D
Sbjct: 1078 DGAPDHETASNHAILQLFQGDQIWLRLHRGAIY-GSSWKYSTFSGYLLYQD 1127
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 85.1 bits (209), Expect = 6e-17
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 177 FDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQ 236
FD ++ NLG +D G+F+C V G Y F +H+L + ++ +L KN +V SA A
Sbjct: 685 FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVN-VPLYVNLMKNEEVLVSAYAN 743
Query: 237 DADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
D +++ ASN +L L GD+++++L G + G++ KYSTFSG+LLY D
Sbjct: 744 DGAPDHETASNHAILQLFQGDQIWLRLHRGAIY-GSSWKYSTFSGYLLYQD 793
>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
Length = 1077
Score = 85.1 bits (209), Expect = 6e-17
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 177 FDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQ 236
FD ++ NLG +D G+F+C V G Y F +H+L + ++ +L KN +V SA A
Sbjct: 969 FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVN-VPLYVNLMKNEEVLVSAYAN 1027
Query: 237 DADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD 287
D +++ ASN +L L GD+++++L G + G++ KYSTFSG+LLY D
Sbjct: 1028 DGAPDHETASNHAILQLFQGDQIWLRLHRGAIY-GSSWKYSTFSGYLLYQD 1077
>gi|4757922 cerebellin 1 precursor [Homo sapiens]
Length = 193
Score = 84.0 bits (206), Expect = 1e-16
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 150 LSATFSGPKIAFYVGLKSPHEGYE------VLKFDDVVTNLGNHYDPTTGKFSCQVRGIY 203
+S K+AF + HE E ++ FD V+ N+GN++D F +GIY
Sbjct: 53 ISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIY 112
Query: 204 FFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHLDSGDEVYVKL 263
F +H++ + + ++ L NG SA A D D + ASN V++ ++ GD Y+KL
Sbjct: 113 SFNFHVV-KVYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKL 171
Query: 264 DGGKAHGGNNNKYSTFSGFLLYP 286
+ G GG KYSTFSGFL++P
Sbjct: 172 ERGNLMGG--WKYSTFSGFLVFP 192
>gi|18104944 cerebellin 4 precursor [Homo sapiens]
Length = 201
Score = 81.3 bits (199), Expect = 9e-16
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 12/154 (7%)
Query: 141 DSEGEVTSAL--SATFSGPKIAFYVGLKSPHEGYE------VLKFDDVVTNLGNHYDPTT 192
DS+G +S L S + K+AF + HE E ++ FD ++ N+GN +
Sbjct: 51 DSKGSSSSPLGISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFT-LE 109
Query: 193 GKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLH 252
F +GIY F++H++ + ++ +L NG+ SA A D D + A+N V+L+
Sbjct: 110 SVFVAPRKGIYSFSFHVI-KVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLY 168
Query: 253 LDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYP 286
LD D+VY+KL+ G GG +YSTFSGFL++P
Sbjct: 169 LDKEDKVYLKLEKGNLVGG--WQYSTFSGFLVFP 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.139 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,829,643
Number of Sequences: 37866
Number of extensions: 1280151
Number of successful extensions: 41728
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 1094
Number of HSP's that attempted gapping in prelim test: 7922
Number of HSP's gapped (non-prelim): 10256
length of query: 287
length of database: 18,247,518
effective HSP length: 101
effective length of query: 186
effective length of database: 14,423,052
effective search space: 2682687672
effective search space used: 2682687672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.