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Search of human proteins with 154355000
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
(711 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 1515 0.0
gi|17402900 far upstream element-binding protein [Homo sapiens] 798 0.0
gi|100816392 far upstream element (FUSE) binding protein 3 [Homo... 535 e-152
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 86 2e-16
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 85 2e-16
gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens] 85 2e-16
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 84 3e-16
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 84 3e-16
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 84 3e-16
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 84 3e-16
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 84 3e-16
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 84 3e-16
gi|222352151 poly(rC) binding protein 1 [Homo sapiens] 82 2e-15
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 80 5e-15
gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens] 80 5e-15
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 80 5e-15
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 80 7e-15
gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens] 80 9e-15
gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens] 77 7e-14
gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens] 77 7e-14
gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens] 76 1e-13
gi|56118219 insulin-like growth factor 2 mRNA binding protein 2 ... 75 2e-13
gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens] 75 2e-13
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 75 2e-13
gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens] 75 3e-13
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 73 8e-13
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 73 8e-13
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 73 8e-13
gi|64085377 insulin-like growth factor 2 mRNA binding protein 2 ... 73 1e-12
gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens] 73 1e-12
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 1515 bits (3923), Expect = 0.0
Identities = 711/711 (100%), Positives = 711/711 (100%)
Query: 1 MSDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
MSDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ
Sbjct: 1 MSDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
Query: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPES 120
PPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPES
Sbjct: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPES 120
Query: 121 KKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQI 180
KKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQI
Sbjct: 121 KKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQI 180
Query: 181 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 240
SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI
Sbjct: 181 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 240
Query: 241 PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM 300
PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM
Sbjct: 241 PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM 300
Query: 301 DILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
DILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ
Sbjct: 301 DILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
Query: 361 DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW 420
DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW
Sbjct: 361 DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW 420
Query: 421 GPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGS 480
GPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGS
Sbjct: 421 GPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGS 480
Query: 481 PQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPH 540
PQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPH
Sbjct: 481 PQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPH 540
Query: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAA 600
QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAA
Sbjct: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAA 600
Query: 601 PPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVAT 660
PPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVAT
Sbjct: 601 PPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVAT 660
Query: 661 GGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAQ 711
GGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAQ
Sbjct: 661 GGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAQ 711
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 798 bits (2060), Expect = 0.0
Identities = 426/703 (60%), Positives = 487/703 (69%), Gaps = 96/703 (13%)
Query: 34 PPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAA 93
PP +G GGGG GGGG G DAF DA+QRARQIAAKIGGDA
Sbjct: 9 PPSSGSAGGGGGGGGGGG------------------VNDAFKDALQRARQIAAKIGGDAG 50
Query: 94 TTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDSISSQLGPIH-PPPRTSMTEEYRVP 152
T++N++ D+G+GGQKR LEDGDQP++KK+A Q DS +QL P+H R+ MTEEY+VP
Sbjct: 51 TSLNSN--DYGYGGQKRPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVP 108
Query: 153 DGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIV 212
DGMVG IIGRGGEQI++IQQ+SGCK+QI+PDSGGLPERS LTG PESVQ AK +LD IV
Sbjct: 109 DGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIV 168
Query: 213 SRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 272
+GR P FH G VQEIMIPA KAGLVIGKGGETIKQLQERAGVKM++IQD
Sbjct: 169 EKGRPAP--GFHH--GDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQD 224
Query: 273 GSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGD-RNEYGSRIGG--GIDVPV 329
G QNT DKPLRI GDPYKVQQA EMV++++ RDQGGF + RNEYGSRIGG GIDVP+
Sbjct: 225 GPQNTGADKPLRITGDPYKVQQAKEMVLELI--RDQGGFREVRNEYGSRIGGNEGIDVPI 282
Query: 330 PRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDL 389
PR +VG+VIGR+GEMIKKIQNDAGVRIQFK DDGT PE+IA I GPPDRC+HAA II DL
Sbjct: 283 PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDL 342
Query: 390 LQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW--GPPGG--EMTFSIPTHKCGLVIGRGGE 445
L+S+++G PG PG PGGRGRGRGQGNW GPPGG E F +PT K GL+IG+GGE
Sbjct: 343 LRSVQAGNPGGPG-----PGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGE 397
Query: 446 NVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP- 504
+K+I+QQ+GA +E+ R PPN DPN KLF IRG+PQQID+A+QLIEEKI GP+ P+GP
Sbjct: 398 TIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPP 457
Query: 505 -------------GPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTY 551
PG PGP PMGP+NP P+N GPPG PH PP Y PQGWGN Y
Sbjct: 458 VPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHG---PPAPYAPQGWGNAY 514
Query: 552 PQWQPPAPHDPSKAAAAAADPN-AAWAAYYSHYYQ---QPPGPVPGPAPAPAAPPAQGEP 607
P WQ AP DP+K A DPN AAWAAYY+HYYQ QPP P AP QG+
Sbjct: 515 PHWQQQAPPDPAK---AGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQ 571
Query: 608 PQPPPTGQSDYTKAWEEYYKKIGQQ-PQQPGAPP--QQDYTKAWEEYYKKQAQVATGGGP 664
P P GQ DYTKAWEEYYKK+GQ P GAPP Q DY+ AW EYY+
Sbjct: 572 QNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYR----------- 620
Query: 665 GAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQ 707
QQAAYY QT G PQ PP QGQ
Sbjct: 621 -------------------QQAAYYAQTSPQGMPQHPPAPQGQ 644
Score = 643 bits (1658), Expect = 0.0
Identities = 379/675 (56%), Positives = 436/675 (64%), Gaps = 127/675 (18%)
Query: 50 PGGGSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQK 109
P GSAGG GGGG G DAF DA+QRARQIAAKIGGDA T++N++ D+G+GGQK
Sbjct: 10 PSSGSAGGGG---GGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSN--DYGYGGQK 64
Query: 110 RQLEDGDQPESKKLASQGDSISSQLGPIHPPP-RTSMTEEYRVPDGMVGLIIGRGGEQIN 168
R LEDGDQP++KK+A Q DS +QL P+H R+ MTEEY+VPDGMVG IIGRGGEQI+
Sbjct: 65 RPLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQIS 124
Query: 169 KIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNAN 228
+IQQ+SGCK+QI+PDSGGLPERS LTG PESVQ AK +LD IV +GR P FH
Sbjct: 125 RIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG--FHHG-- 180
Query: 229 GGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGD 288
G VQEIMIPA KAGLVIGKGGETIKQLQERAGVKM++IQDG QNT DKPLRI GD
Sbjct: 181 DGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGD 240
Query: 289 PYKVQQACEMVMDILRERDQGGFGD-RNEYGSRIGG--GIDVPVPRHSVGVVIGRSGEMI 345
PYKVQQA EMV++++R DQGGF + RNEYGSRIGG GIDVP+PR +VG+VIGR+GEMI
Sbjct: 241 PYKVQQAKEMVLELIR--DQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 298
Query: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 405
KKIQNDAGVRIQFK DDGT PE+IA I GPPDRC+HAA II DLL+S+++G PG PG
Sbjct: 299 KKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPG--- 355
Query: 406 MPPGGRGRGRGQGNW--GPPGG--EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEIS 461
PGGRGRGRGQGNW GPPGG E F +PT K GL+IG+GGE +K+I+QQ+GA +E+
Sbjct: 356 --PGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQ 413
Query: 462 RQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPG 521
R PPN DPN KLF IRG+PQQID+A+QLIEEKI GP+ P+GP P P GP G PG
Sbjct: 414 RNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGP----PVPHGPHGV--PG 467
Query: 522 PFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYS 581
P GPPG PP P G N PAP++P
Sbjct: 468 P--HGPPG--------PPGPGTPMGPYN-------PAPYNPG------------------ 492
Query: 582 HYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQ 641
PPGP P PAP AP + W Y QQ APP
Sbjct: 493 -----PPGPAPHGPPAPYAP------------------QGWGNAYPHWQQQ-----APPD 524
Query: 642 QDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQ--TPGPGGPQ 699
A G+ P+ SAAWA YY A YY Q P P P
Sbjct: 525 P-----------------------AKAGTDPN-SAAWAAYY---AHYYQQQAQPPPAAPA 557
Query: 700 PPPTQ-----QGQQQ 709
PT QG QQ
Sbjct: 558 GAPTTTQTNGQGDQQ 572
Score = 37.4 bits (85), Expect = 0.049
Identities = 34/93 (36%), Positives = 38/93 (40%), Gaps = 17/93 (18%)
Query: 7 GGP-----PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG---GGPGGGGPGGGSAGGP 58
GGP PP P P G G G PPGPPG G G P GP G + GP
Sbjct: 448 GGPVNPLGPPVPHGPHGVPGPHG------PPGPPGPGTPMGPYNPAPYNPGPPGPAPHGP 501
Query: 59 SQPPGGGGPGIRKDAFADAVQRARQIAAKIGGD 91
P G G +A+ Q+A AK G D
Sbjct: 502 PAPYAPQGWG---NAYPHWQQQAPPDPAKAGTD 531
>gi|100816392 far upstream element (FUSE) binding protein 3 [Homo
sapiens]
Length = 572
Score = 535 bits (1378), Expect = e-152
Identities = 310/638 (48%), Positives = 403/638 (63%), Gaps = 98/638 (15%)
Query: 68 GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTP-----DFGFGGQKRQLEDGDQPESKK 122
G++ + F DA+ R RQIAAKI D+ +NNSTP +G+G QKR L+DG
Sbjct: 13 GMKAEGFVDALHRVRQIAAKI--DSIPHLNNSTPLVDPSVYGYGVQKRPLDDG------- 63
Query: 123 LASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISP 182
+ +QLG + RT +TEE++VPD MVG IIGRGGEQI++IQ +SGCK+QI+
Sbjct: 64 -------VGNQLGAL-VHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS 115
Query: 183 DSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPA 242
+S G+PER LTG PES+++AK +L IV R R GP FH++ + N T+QEI+IPA
Sbjct: 116 ESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPG--FHNDIDS--NSTIQEILIPA 171
Query: 243 GKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDI 302
K GLVIG+GGETIKQLQER GVKM++IQDG T DKPLRI GD +KVQQA EMV++I
Sbjct: 172 SKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEI 231
Query: 303 LRERDQGGF-GDRNEYGSRIGGG-IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
+RE+DQ F G R ++ SR+GGG I+V VPR +VG+VIGR+GEMIKKIQNDAGVRIQFK
Sbjct: 232 IREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKP 291
Query: 361 DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW 420
DDG PE+ A +MGPPDRC+HAA II++L+ + + G G RGRGRG+G+W
Sbjct: 292 DDGISPERAAQVMGPPDRCQHAAHIISELILTAQERD-----GFGGLAAARGRGRGRGDW 346
Query: 421 --GPPGG--EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFI 476
G PGG E+T+++P KCGLVIG+GGEN+K+INQQ+GA VE+ R PPN DPN + F
Sbjct: 347 SVGAPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 406
Query: 477 IRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGG 536
IRG PQQI+ A+QLI+EK+ GG P G F PF+Q P APPH
Sbjct: 407 IRGVPQQIEVARQLIDEKV-----------GGTNLGAP-GAFGQSPFSQPP--APPHQ-- 450
Query: 537 PPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAP 596
+ +PP+ G P+ AA +P++ PV GP
Sbjct: 451 ---NTFPPRSSGCF-----------PNMAAKVNGNPHST--------------PVSGP-- 480
Query: 597 APAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQA 656
P G +AW++ +++ Q QP + Q +Y+KAWE+YYKKQ+
Sbjct: 481 -----------PAFLTQGWGSTYQAWQQPTQQVPSQQSQPQSS-QPNYSKAWEDYYKKQS 528
Query: 657 QVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 694
A+ + P PDY+ AWAEYYRQQ A+YGQT G
Sbjct: 529 HAASAAPQASSP---PDYTMAWAEYYRQQVAFYGQTLG 563
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 85.5 bits (210), Expect = 2e-16
Identities = 193/763 (25%), Positives = 245/763 (32%), Gaps = 159/763 (20%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPP------PGPPG--AGDRGGGGPGGGGPGG--GSAG 56
G PG P P G G G G P PGP G GD G PG GP G G G
Sbjct: 899 GRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTG 958
Query: 57 --GPSQPPG-------GGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGG 107
GP PPG G PG R + +G T + G G
Sbjct: 959 FPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPG 1018
Query: 108 QKRQL-EDGDQPESKKLASQGDSISSQL-GPIHPPPRTSMTEEYRVPDGMVGLIIGRGGE 165
E G + K ++GD + L G PP + +P G VG + +G E
Sbjct: 1019 PPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLP-GPVGALGLKGNE 1077
Query: 166 QINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHD 225
+G + P P + + G P G GPPG +
Sbjct: 1078 GPPGPPGPAGSPGERGPAGAAGP---IGIPGRP----------------GPQGPPGPAGE 1118
Query: 226 NANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRI 285
G+ G PAG+ GL G L AG +DG +
Sbjct: 1119 KGAPGEKGP----QGPAGRDGLQGPVG------LPGPAGPVGPPGEDGDKGE-------- 1160
Query: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYG----SRIGGGIDVPVPRHSVGVVIGRS 341
IG+P +G GD+ E G + G I P P + G R
Sbjct: 1161 IGEP----------------GQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRG 1204
Query: 342 GEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPP 401
+ + + D G R GP + + GPP + + GPPGPP
Sbjct: 1205 QQGLFGQKGDEGPR---GFPGPPGPVGLQGLPGPPGEKGETGDV-------GQMGPPGPP 1254
Query: 402 G-----------GPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAI 450
G GP PPGG G G G PG +P + G +G K
Sbjct: 1255 GPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLP-GEGGPPGPKGERGEKGE 1313
Query: 451 NQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPL-CPVGPG-PGG 508
+ +GA + PP D +GSP GP+ P PG PG
Sbjct: 1314 SGPSGAAGPPGPKGPPGDDGP------KGSP---------------GPVGFPGDPGPPGE 1352
Query: 509 PGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDP------ 562
PGPAG GP P ++G G P G P P P G + PP P P
Sbjct: 1353 PGPAGQDGP----PGDKGDDGEPGQTGSPGPTGEP--GPSGPPGKRGPPGPAGPEGRQGE 1406
Query: 563 --SKAAAAAADPNAAWAAYYSHYYQQPPGP-----VPGP--------APAPAAPPAQGEP 607
+K A P PGP +PGP +P P PP P
Sbjct: 1407 KGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGP 1466
Query: 608 PQPPPTGQSDYTKAWEEYYKKIG--QQPQQPGAPPQQDYTKAWEEYYKKQAQVATGG--- 662
P P K + + IG P + G + K Q TG
Sbjct: 1467 PGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGP 1526
Query: 663 -GPGAPPGSQPDYSAAWAEYYRQQAAYYGQT--PGPGGPQPPP 702
GP PPG A+ G+ PGP GP PP
Sbjct: 1527 IGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPP 1569
Score = 80.5 bits (197), Expect = 5e-15
Identities = 202/772 (26%), Positives = 247/772 (31%), Gaps = 163/772 (21%)
Query: 8 GPPPGPPPPA-GGGGGAGGAGG-----GPP-----------PGPPGAGDRGGGGPGGGGP 50
GP P PP G GA G G GPP PG PGA D G PG GP
Sbjct: 712 GPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGA-DGPPGHPGKEGP 770
Query: 51 GGGSAG-GPSQPPGG-GGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQ 108
G G GP P G G PG R AD ++ + + G D D G G
Sbjct: 771 PGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKG---DMGIKGD 827
Query: 109 KRQL-------EDGDQPESKKLASQGDSISSQLGPIHPP--------PRTSMTEEYRVPD 153
+ ++ EDG + + GD GP+ PP P + P
Sbjct: 828 RGEIGPPGPRGEDGPEGPKGRGGPNGDP-----GPLGPPGEKGKLGVPGLPGYPGRQGPK 882
Query: 154 GMVGL--IIGRGGEQINK-IQQDSGCKVQISPDSGGLPERSV-SLTGAPESVQKAKMMLD 209
G +G G GE+ + G + Q P +G ER +TG P +
Sbjct: 883 GSIGFPGFPGANGEKGGRGTPGKPGPRGQRGP-TGPRGERGPRGITGKPGPKGNSG---- 937
Query: 210 DIVSRGRGGPPGQFHDNANGGQNG--TVQEIMIPAGKAGLV--IGKGGETIKQLQERAGV 265
G GPPG+ N G G + P GK GL G+ GET Q
Sbjct: 938 ---GDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQ------- 987
Query: 266 KMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGI 325
T P ++G QG G+ G R G
Sbjct: 988 ---------GKTGPPGPPGVVG-------------------PQGPTGETGPMGERGHPGP 1019
Query: 326 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
P + + G+ G + D G +D G G P
Sbjct: 1020 PGPPGEQGLPGLAGKEG-----TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGP------- 1067
Query: 386 INDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRG 443
+ L GPPGPP GP PG RG G G PG G P + G +G
Sbjct: 1068 VGALGLKGNEGPPGPP-GPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKG 1126
Query: 444 GENVKAINQQTG--AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCP 501
+ + G + + P G+ K I G P Q E+ GP P
Sbjct: 1127 PQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEI--GEPGQKGSKGDKGEQGPPGPTGP 1184
Query: 502 VG----PGPGG----PGPAGPMGPF----NPGPFNQGPPGAPPHAG-----GPPPHQYPP 544
G PGP G PGP G G F + GP +G PG P G GPP +
Sbjct: 1185 QGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGP--RGFPGPPGPVGLQGLPGPPGEKGET 1242
Query: 545 QGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV--PGPAPAPAAPP 602
G P PP P PS A A Q PPG + PG P
Sbjct: 1243 GDVGQMGPP-GPPGPRGPSGAPGADGP-------------QGPPGGIGNPGAVGEKGEPG 1288
Query: 603 AQGEPPQP---PPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVA 659
GEP P P G E P P PP D K V
Sbjct: 1289 EAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG------SPGPVG 1342
Query: 660 TGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPG-----GPQPPPTQQG 706
G PG PPG + GQT PG GP PP ++G
Sbjct: 1343 FPGDPG-PPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRG 1393
Score = 80.1 bits (196), Expect = 7e-15
Identities = 197/747 (26%), Positives = 253/747 (33%), Gaps = 133/747 (17%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGG-GPGG--GSAGGPSQPPGGG 65
P GPP P G G G G P G PG G RG GP G GP G G G QP G
Sbjct: 650 PSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKG 709
Query: 66 GPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLAS 125
G + + Q G A + G G+K L P
Sbjct: 710 NVGPQGEPGPPGQQ---------GNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMP---- 756
Query: 126 QGDSISSQLGPIHP----PPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIS 181
+ P HP PP + P G +G RG + + I+ G K +
Sbjct: 757 -----GADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKG 811
Query: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIP 241
D G P + ++ + + RG GP G GG NG + P
Sbjct: 812 ED--GFPGFKGDM-----GIKGDRGEIGPPGPRGEDGPEGP---KGRGGPNGDPGPLGPP 861
Query: 242 AGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMD 301
K L G + R G K + G N +K R G P K +
Sbjct: 862 GEKGKL----GVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR--GTPGKPGPRGQ---- 911
Query: 302 ILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD 361
+G G R E G R G P P+ + G G +G ++ N
Sbjct: 912 ------RGPTGPRGERGPR--GITGKPGPKGNSGGD-GPAGPPGERGPN----------- 951
Query: 362 DGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMP--PGGRGRGRGQGN 419
GP+ GP GPPGPPG G+P PG RG QG
Sbjct: 952 ---GPQGPTGFPGP-------------------KGPPGPPGKDGLPGHPGQRGETGFQGK 989
Query: 420 WGPPG--GEMTFSIPTHKCGLVIGRGGENVKAINQQTG----AFVEISRQLP-------P 466
GPPG G + PT + G + RG + G A E ++ P
Sbjct: 990 TGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGK 1049
Query: 467 NGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVG-PGPGGP-GPAGPMG-PFNPGP 522
+G P + F RG P + E GP P G PG GP G AGP+G P PGP
Sbjct: 1050 DGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGP 1109
Query: 523 FNQGPPGAPPHAGGPPPHQYP--PQGWGNTYPQWQPPAPHDPSKAAAAAADPN-----AA 575
QGPPG P G P + P P G P P P D
Sbjct: 1110 --QGPPG-PAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQ 1166
Query: 576 WAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSD-YTKAWEEYYKKIGQQPQ 634
+ Q PPGP GP P G +P P GQ + + +E + P
Sbjct: 1167 KGSKGDKGEQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPG 1225
Query: 635 Q------PGAPPQQDYTKAWEEYYKKQAQVATG--GGPGA-----PPGSQPDYSAAWAEY 681
PG P ++ T + G G PGA PPG + A +
Sbjct: 1226 PVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKG 1285
Query: 682 YRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
+A G PG GGP P ++G++
Sbjct: 1286 EPGEAGEPG-LPGEGGPPGPKGERGEK 1311
Score = 77.8 bits (190), Expect = 3e-14
Identities = 195/762 (25%), Positives = 243/762 (31%), Gaps = 144/762 (18%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAG-GPSQPPGG-GGPG 68
PGP G G G G PG PGA D G PG GP G G GP P G G PG
Sbjct: 732 PGPQGAIGPPGEKGPLGKPGLPGMPGA-DGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPG 790
Query: 69 IRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQL-------EDGDQPESK 121
R AD ++ + + G D D G G + ++ EDG +
Sbjct: 791 PRGVKGADGIRGLKGTKGEKGEDGFPGFKG---DMGIKGDRGEIGPPGPRGEDGPEGPKG 847
Query: 122 KLASQGDSISSQLGPIHPP--------PRTSMTEEYRVPDGMVGL--IIGRGGEQINK-I 170
+ GD GP+ PP P + P G +G G GE+ +
Sbjct: 848 RGGPNGDP-----GPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGT 902
Query: 171 QQDSGCKVQISPDSGGLPERSV-SLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANG 229
G + Q P +G ER +TG P + G GPPG+ N
Sbjct: 903 PGKPGPRGQRGP-TGPRGERGPRGITGKPGPKGNSG-------GDGPAGPPGERGPNGPQ 954
Query: 230 GQNGTV--QEIMIPAGKAGLV--IGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRI 285
G G + P GK GL G+ GET Q T P +
Sbjct: 955 GPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQ----------------GKTGPPGPPGV 998
Query: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 345
+G QG G+ G R G P + + G+ G
Sbjct: 999 VGP-------------------QGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGT-- 1037
Query: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 405
+ D G +D G G P + L GPPGPPG P
Sbjct: 1038 ---KGDPGPAGLPGKDGPPGLRGFPGDRGLPGP-------VGALGLKGNEGPPGPPG-PA 1086
Query: 406 MPPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGENVKAINQQTG--AFVEIS 461
PG RG G G PG G P + G +G + + G +
Sbjct: 1087 GSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPA 1146
Query: 462 RQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP----GPGG----PGPAG 513
+ P G+ K I G P Q E+ GP P GP GP G PGP G
Sbjct: 1147 GPVGPPGEDGDKGEI--GEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRG 1204
Query: 514 PMGPF----NPGPFNQGPPGAPPHAG-----GPPPHQYPPQGWGNTYPQWQPPAPHDPSK 564
G F + GP +G PG P G GPP + G P PP P PS
Sbjct: 1205 QQGLFGQKGDEGP--RGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPG-PPGPRGPSG 1261
Query: 565 AAAAAADPNAAWAAYYSHYYQQPPGPV--PGPAPAPAAPPAQGEPPQPP---PTGQSDYT 619
A A Q PPG + PG P GEP P P G
Sbjct: 1262 APGADGP-------------QGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGER 1308
Query: 620 KAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPG-----APPGSQPDY 674
E P P PP D K G PG PPG + D
Sbjct: 1309 GEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDD 1368
Query: 675 SAAWAEYYRQQAAYYGQTPGPG-----GPQPPPTQQGQQQAQ 711
G + PG GP P +QG++ A+
Sbjct: 1369 GEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAK 1410
Score = 65.5 bits (158), Expect = 2e-10
Identities = 191/773 (24%), Positives = 250/773 (32%), Gaps = 155/773 (20%)
Query: 8 GPP--------PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPS 59
GPP PGPP G G G G PPG PG G G GP G P
Sbjct: 469 GPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLP----GADGLPGPPGTMLMLPF 524
Query: 60 QPPGGGGPGIR------KDAFADAVQRARQIAAK--IGGDAATTVNNSTPDFGFGGQKRQ 111
+ GGG G + +++ A A+ + ++A + G T G GG K
Sbjct: 525 RFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKG- 583
Query: 112 LEDGDQPESKKLASQGDSISSQLGPIHPPPRTSM--TEEYRVPDGMVGLIIGRGGEQINK 169
E GD QG GP P R ++ R G G RG + +
Sbjct: 584 -EPGDVGPQGPRGVQGPP-----GPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAG 637
Query: 170 IQQDSGCKVQISPDS-----GGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFH 224
+ + G + P G ER P + + +G GPPG
Sbjct: 638 LPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPG 697
Query: 225 DNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLR 284
GQ G P G +G GE Q+ G+Q + P
Sbjct: 698 VTGMDGQPG-------PKGN----VGPQGEPGPPGQQG--------NPGAQ--GLPGPQG 736
Query: 285 IIGDPYKVQQACEMVMDILRERD--QGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSG 342
IG P + + + + D G G G + GG P P+ +G R
Sbjct: 737 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEK--GGQGPPGPQGPIGYPGPRGV 794
Query: 343 EMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPG 402
+ I+ G + + +D G + I G DR E GPPGP G
Sbjct: 795 KGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG--DRGE--------------IGPPGPRG 838
Query: 403 GPGMPPGGRGRGRGQGN---WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVE 459
G P G +GRG G+ GPPG + +P GL G + K G F
Sbjct: 839 EDG-PEGPKGRGGPNGDPGPLGPPGEKGKLGVP----GLPGYPGRQGPKGSIGFPG-FPG 892
Query: 460 ISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVG-PGP----GGPGPAGP 514
+ + G P G P GP G PGP GG GPAGP
Sbjct: 893 ANGEKGGRGTP--------GKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGP 944
Query: 515 MGPFNPG--------PFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAA 566
G P P +GPPG PP G P H P G T Q + P P
Sbjct: 945 PGERGPNGPQGPTGFPGPKGPPG-PPGKDGLPGH---PGQRGETGFQGKTGPPGPP--GV 998
Query: 567 AAAADPNAAWAAYYSHYYQQPPGP-----VPGPA--------PAPAAPPAQGEPP----- 608
P + PPGP +PG A P PA P + PP
Sbjct: 999 VGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGF 1058
Query: 609 -----QPPPTGQSDYTKAWEEYYKKIGQQPQQ-PGAPPQQDYTKAWEEYYKKQAQVATGG 662
P P G +G + + P PP + + G
Sbjct: 1059 PGDRGLPGPVG-------------ALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPG 1105
Query: 663 --GPGAPPGSQPDYSAAWAEYYRQQAAYYG-----QTPGPGGPQPPPTQQGQQ 708
GP PPG + A + + A G PGP GP PP + G +
Sbjct: 1106 RPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDK 1158
Score = 64.7 bits (156), Expect = 3e-10
Identities = 188/746 (25%), Positives = 228/746 (30%), Gaps = 165/746 (22%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGG--GGPGGGSAGGPSQPPGGGGPG 68
PGP P G GG G G P GP G +G GP G G G + G PG GP
Sbjct: 570 PGPVGPPGSGGLKGEPGDVGPQGPRGV--QGPPGPAGKPGRRGRAGSDGARGMPGQTGP- 626
Query: 69 IRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGD 128
+ D D + G + D G E GD E G+
Sbjct: 627 -KGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDG--------ERGDDGEVGPRGLPGE 677
Query: 129 -SISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKV--QISPDSG 185
LGP PP P G+ G+ G+ G + N Q Q +P +
Sbjct: 678 PGPRGLLGPKGPPGPPG-------PPGVTGMD-GQPGPKGNVGPQGEPGPPGQQGNPGAQ 729
Query: 186 GLPERSVSLTGAPESVQKAKMMLDDIVSR-------GRGGPPGQFHDNANGGQNGTVQEI 238
GLP ++ E K L + G+ GPPG+ G G
Sbjct: 730 GLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQG----- 784
Query: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM 298
P G G KG + I+ L+ G K +DG D ++
Sbjct: 785 --PIGYPGPRGVKGADGIRGLKGTKGEKG---EDGFPGFKGDMGIK-------------- 825
Query: 299 VMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQF 358
GDR E G G D P G G G +
Sbjct: 826 -------------GDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPL-------------- 858
Query: 359 KQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQG 418
GP +G P + R GP G G PG P G G G+G
Sbjct: 859 ------GPPGEKGKLGVPGLPGYPGR----------QGPKGSIGFPGFP-GANGEKGGRG 901
Query: 419 NWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLP-----------PN 467
G PG P + G RG + I + G P P
Sbjct: 902 TPGKPG-------PRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQ 954
Query: 468 GDPNFKLFIIRGSPQQID----HAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPF 523
G F P D H Q E +G P GP PG GP GP G GP
Sbjct: 955 GPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGP-PGVVGPQGPTG--ETGPM 1011
Query: 524 NQ-GPPGAPPHAGGPPPHQYPPQGWGNTYPQWQP-----PAPHDPSKAAAAAADPNAAW- 576
+ G PG P GPP Q P G + P P P D
Sbjct: 1012 GERGHPGPP----GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGP 1067
Query: 577 -AAYYSHYYQQPPGPVPGPA-------PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKK 628
A + PPGP PGPA PA AA P G P +P P G +K
Sbjct: 1068 VGALGLKGNEGPPGP-PGPAGSPGERGPAGAAGPI-GIPGRPGPQGPPGPAG------EK 1119
Query: 629 IGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGG--GPGAPPGSQPDYSAAWAEYYRQQA 686
+ P P +D Q V G GP PPG D +
Sbjct: 1120 GAPGEKGPQGPAGRDGL---------QGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSK 1170
Query: 687 AYYGQT--PGPGGPQPPPTQQGQQQA 710
G+ PGP GPQ P Q G A
Sbjct: 1171 GDKGEQGPPGPTGPQGPIGQPGPSGA 1196
Score = 57.4 bits (137), Expect = 5e-08
Identities = 78/252 (30%), Positives = 89/252 (35%), Gaps = 54/252 (21%)
Query: 396 GPPGPPGGPGM-----PPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGENVK 448
G PGPPG PG PPG +G G G PG GE S P K G G E +
Sbjct: 1345 GDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQ 1404
Query: 449 AINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG--P 506
+ GA E + PP G P + + G PVG P
Sbjct: 1405 G---EKGAKGEAGLEGPPGKTGPIGPQGAPGKPGP---------DGLRGIPGPVGEQGLP 1452
Query: 507 GGPGPAGPMGPFNPGPF-----NQGPPGAPPHAG-----GPPPHQYP------PQGWGNT 550
G PGP GP GP P + GP G H G GPP Q P G++
Sbjct: 1453 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS 1512
Query: 551 YPQWQ-----PPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAA 600
P+ + P P P P A S P GP PGP P P
Sbjct: 1513 GPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSS----GPTGPKGEAGHPGP-PGPPG 1567
Query: 601 PPAQGEPPQPPP 612
PP GE QP P
Sbjct: 1568 PP--GEVIQPLP 1577
Score = 53.9 bits (128), Expect = 5e-07
Identities = 80/327 (24%), Positives = 97/327 (29%), Gaps = 60/327 (18%)
Query: 393 LRSGPPGPPGGPGMP-PGGRGRGRGQ----GNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
L GPPGP G G+P P G GQ G GPPG G
Sbjct: 466 LIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRP----------------GLPGA 509
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPG 507
+ G + + + GD K ++ Q Q + GP P+G G
Sbjct: 510 DGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGL-TG 568
Query: 508 GPGPAGP--MGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKA 565
PGP GP G P + GP G P GPP P G P
Sbjct: 569 RPGPVGPPGSGGLKGEPGDVGPQG-PRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPK 627
Query: 566 AAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGE------PPQPPPTGQSDYT 619
D A H P PGP GE P +P P G
Sbjct: 628 GDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLG-- 685
Query: 620 KAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWA 679
P+ P PP + + V G PG PPG Q + A
Sbjct: 686 -------------PKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPG-PPGQQGNPGAQ-- 729
Query: 680 EYYRQQAAYYGQTPGPGGPQPPPTQQG 706
PGP G PP ++G
Sbjct: 730 -----------GLPGPQGAIGPPGEKG 745
Score = 48.1 bits (113), Expect = 3e-05
Identities = 69/260 (26%), Positives = 91/260 (35%), Gaps = 38/260 (14%)
Query: 5 STGGPPP-GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGG-----GGPGGGSAGG 57
+ G P P GPP G G G G PGPPG G G GP G G PG + G
Sbjct: 1319 AAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPG 1378
Query: 58 PSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAAT--TVNNSTPDFGFGGQKRQLEDG 115
P+ PG GP ++ A RQ G+A + P G + DG
Sbjct: 1379 PTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDG 1438
Query: 116 DQPESKKLASQG----DSISSQLGPIHPPPRTSMTEE-----YRVPDGMVGLIIGRGGEQ 166
+ + QG GP+ PP + + + G++GL IG GEQ
Sbjct: 1439 LRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGL-IGPPGEQ 1497
Query: 167 INKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDN 226
K G + P P+ +TG + G GPPG
Sbjct: 1498 GEK-----GDRGLPGPQGSSGPKGEQGITGPSGPIGPPG-------PPGLPGPPGPKGAK 1545
Query: 227 ANGGQNGTVQEIMIPAGKAG 246
+ G G P G+AG
Sbjct: 1546 GSSGPTG-------PKGEAG 1558
Score = 40.0 bits (92), Expect = 0.007
Identities = 29/71 (40%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 6 TGGPPP----GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGG--GSAGGPS 59
TG P P GP P G G G G PPGPPG G PG G G G G
Sbjct: 990 TGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQ----GLPGLAGKEGTKGDPGPAG 1045
Query: 60 QPPGGGGPGIR 70
P G PG+R
Sbjct: 1046 LPGKDGPPGLR 1056
Score = 36.2 bits (82), Expect = 0.11
Identities = 29/76 (38%), Positives = 29/76 (38%), Gaps = 15/76 (19%)
Query: 7 GGPPPGPPPPAG--GGGGAGGAGG-----------GPPPGPPGAGDRGGGGPGG--GGPG 51
G PPGP P G G G GA G G P GD G G G G PG
Sbjct: 776 GQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPG 835
Query: 52 GGSAGGPSQPPGGGGP 67
GP P G GGP
Sbjct: 836 PRGEDGPEGPKGRGGP 851
Score = 35.8 bits (81), Expect = 0.14
Identities = 22/54 (40%), Positives = 22/54 (40%), Gaps = 12/54 (22%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
PPGPP G G G G P GP G G PG GP G PPG
Sbjct: 1529 PPGPPGLPGPPGPKGAKGSSGPTGPKGE----AGHPGPPGPPG--------PPG 1570
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 85.1 bits (209), Expect = 2e-16
Identities = 94/333 (28%), Positives = 115/333 (34%), Gaps = 66/333 (19%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTG 455
GPP PPG P PP +G + QG PPG G + N+ G
Sbjct: 49 GPPSPPGKPQGPPP-QGGNQPQGPPPPPGKPQ----------------GPPPQGGNKPQG 91
Query: 456 AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPM 515
PP G P +G P Q D K P P G P GP P G
Sbjct: 92 P--------PPPGKP-------QGPPPQGD--------KSRSPRSPPGK-PQGPPPQGGN 127
Query: 516 GPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAA 575
P P P G P PP GG P PP G PQ PP + S+++ +
Sbjct: 128 QPQGPPP-PPGKPQGPPPQGGNKPQGPPPPG----KPQGPPPQGDNKSRSSRSPPGKPQG 182
Query: 576 WAAYYSHYYQQPP-------GPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYK- 627
+ Q PP GP P P PP G+P PPP G + A K
Sbjct: 183 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKP 242
Query: 628 -----KIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYY 682
+ G QPQ P PP + + K Q G G PP ++ +
Sbjct: 243 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPG 302
Query: 683 RQQA-------AYYGQTPGPGGPQPPPTQQGQQ 708
+ Q G P PG PQ PP Q G +
Sbjct: 303 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 335
Score = 77.8 bits (190), Expect = 3e-14
Identities = 101/347 (29%), Positives = 122/347 (35%), Gaps = 102/347 (29%)
Query: 365 GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPG 424
GP GPP + ++ +R S RS PPG P GP PP G + +G PP
Sbjct: 152 GPPPPGKPQGPPPQGDNKSR-------SSRS-PPGKPQGP--PPQGGNQPQGPP---PPP 198
Query: 425 GEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQI 484
G+ P +GG N+ G PP G P +G P Q
Sbjct: 199 GKPQGPPP---------QGG------NKPQGP--------PPPGKP-------QGPPPQG 228
Query: 485 DHAKQLIEEKIEGPLCPVGPGP-GGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYP 543
D+ Q P P GP P GG P GP P G P PP GG P P
Sbjct: 229 DNKSQSARSP---PGKPQGPPPQGGNQPQGPPPP-------PGKPQGPPPQGGNKPQGPP 278
Query: 544 PQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQ-----PPGPVPGPAPA- 597
P G + Q P P SK+ ++ + P Q PPG GP P
Sbjct: 279 PPG------KPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 332
Query: 598 ---PAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKK 654
P PP G+P PPP G S A P +P PPQQ+
Sbjct: 333 GNKPQGPPPPGKPQGPPPQGGSKSRSA--------RSPPGKPQGPPQQEGNNP------- 377
Query: 655 QAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPP 701
GP P G P + QA GQ GP P+PP
Sbjct: 378 -------QGPPPPAGGNPQ---------QPQAPPAGQPQGP--PRPP 406
Score = 71.6 bits (174), Expect = 2e-12
Identities = 75/232 (32%), Positives = 84/232 (36%), Gaps = 46/232 (19%)
Query: 504 PGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAG----GPPPHQYPPQG---WGNTYPQWQP 556
P GG P GP P PG P G PP G GPPP PQG G PQ P
Sbjct: 40 PPQGGNKPQGPPSP--PGK----PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 93
Query: 557 P--APHDPSKAAAAAADPNAAWAAYYSHYYQ---QPPGPVP------GPAP----APAAP 601
P P P + P + Q QP GP P GP P P P
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 153
Query: 602 PAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQ---QPGAPPQQDYTKAWEEYYKKQAQV 658
P G+P PPP G + + K G PQ QP PP K Q
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP--------GKPQGPP 205
Query: 659 ATGGG--PGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
GG G PP +P + Q A ++P PG PQ PP Q G Q
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSA----RSP-PGKPQGPPPQGGNQ 252
Score = 62.0 bits (149), Expect = 2e-09
Identities = 59/210 (28%), Positives = 71/210 (33%), Gaps = 46/210 (21%)
Query: 519 NPGPFNQGPPGAPPHAG----GPPPHQYPPQG---WGNTYPQWQPPAPHDPSKAAAAAAD 571
+P P GAPP G GPP PQG G PQ PP P P +
Sbjct: 28 SPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 87
Query: 572 PNAAWAAYYSHYYQQPPGPVPGPAP------APAAPPAQGEPPQPPPTGQSDYTKAWEEY 625
PPG GP P +P +PP G+P PPP G
Sbjct: 88 KPQG---------PPPPGKPQGPPPQGDKSRSPRSPP--GKPQGPPPQG----------- 125
Query: 626 YKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQ 685
G QPQ P PP + + K Q G G PP ++ + + Q
Sbjct: 126 ----GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQ 181
Query: 686 A-------AYYGQTPGPGGPQPPPTQQGQQ 708
G P PG PQ PP Q G +
Sbjct: 182 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 211
Score = 49.3 bits (116), Expect = 1e-05
Identities = 24/57 (42%), Positives = 25/57 (43%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
G P GPPPP G G GG P GPP G G P GG S P +P G
Sbjct: 250 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG 306
Score = 49.3 bits (116), Expect = 1e-05
Identities = 30/77 (38%), Positives = 30/77 (38%), Gaps = 16/77 (20%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGG-------GPGGGSAGGPS 59
G P GPPPP G G GG P GPP G G P GG P G G P
Sbjct: 312 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQ 371
Query: 60 Q---------PPGGGGP 67
Q PP GG P
Sbjct: 372 QEGNNPQGPPPPAGGNP 388
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 8 GPPPGP-----PPPAGGGGGAGGAGGGPPPGPPGAGDRG------GGGPGGGGP-GGGSA 55
GPPP P PPP GG G G P GPP GD+ G P G P GG
Sbjct: 70 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 129
Query: 56 GGPSQPPG 63
GP PPG
Sbjct: 130 QGPPPPPG 137
Score = 46.6 bits (109), Expect = 8e-05
Identities = 23/57 (40%), Positives = 24/57 (42%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
G P GPPPP G G GG P GPP G G P G S P +P G
Sbjct: 126 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQG 182
Score = 46.2 bits (108), Expect = 1e-04
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPP---GAGDRGGGGPGGGGPG------GGSAGGP 58
G P GPPP G + + G P GPP G +G P GG P G GP
Sbjct: 343 GKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGP 402
Query: 59 SQPPGGGGP 67
+PP GG P
Sbjct: 403 PRPPQGGRP 411
Score = 45.8 bits (107), Expect = 1e-04
Identities = 31/74 (41%), Positives = 31/74 (41%), Gaps = 17/74 (22%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGG----GPPP-----GPPGAGDRGG-------GGPGGGGP 50
G P GPPPP G G GG GPPP GPP GD G P G P
Sbjct: 188 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPP 247
Query: 51 -GGGSAGGPSQPPG 63
GG GP PPG
Sbjct: 248 QGGNQPQGPPPPPG 261
Score = 44.7 bits (104), Expect = 3e-04
Identities = 28/66 (42%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Query: 9 PPPGPP---PPAGGGGGAGGAGGGPPPGPPGAGDRGG-------GGPGGGGP-GGGSAGG 57
PPPG P PP GG G G P GPP GD G P G P GG G
Sbjct: 134 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQG 193
Query: 58 PSQPPG 63
P PPG
Sbjct: 194 PPPPPG 199
Score = 44.3 bits (103), Expect = 4e-04
Identities = 43/130 (33%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 2 SDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPP-GAGDRGGGGPGGGGPGGGSAGGPSQ 60
S S G P GPPP GG G PPPG P G +GG P G P G P
Sbjct: 296 SSRSPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP----PGKPQG 347
Query: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNN---STPDFGFGGQKRQLEDGDQ 117
PP GG R AR K G NN P G Q+ Q Q
Sbjct: 348 PPPQGGSKSRS---------ARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 398
Query: 118 PESKKLASQG 127
P+ QG
Sbjct: 399 PQGPPRPPQG 408
Score = 43.5 bits (101), Expect = 7e-04
Identities = 30/81 (37%), Positives = 31/81 (38%), Gaps = 25/81 (30%)
Query: 8 GPPPGP-----PPPAGGGGGAGGAGGGPPPGPPGAGD------------------RGGGG 44
GPPP P PPP GG G G P GPP GD +GG
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQ 190
Query: 45 PGGGGPGGGSAGGPSQPPGGG 65
P G P G GP PP GG
Sbjct: 191 PQGPPPPPGKPQGP--PPQGG 209
Score = 43.5 bits (101), Expect = 7e-04
Identities = 30/81 (37%), Positives = 31/81 (38%), Gaps = 25/81 (30%)
Query: 8 GPPPGP-----PPPAGGGGGAGGAGGGPPPGPPGAGD------------------RGGGG 44
GPPP P PPP GG G G P GPP GD +GG
Sbjct: 193 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQ 252
Query: 45 PGGGGPGGGSAGGPSQPPGGG 65
P G P G GP PP GG
Sbjct: 253 PQGPPPPPGKPQGP--PPQGG 271
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 7 GGPPPGPPP-PAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGG 65
G PPPG P P GG + PP P G +GG P G P G GP PP GG
Sbjct: 276 GPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP--PPQGG 333
Score = 42.4 bits (98), Expect = 0.002
Identities = 28/66 (42%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
Query: 9 PPPGPP---PPAGGGGGAGGAGGGPPPGPP---GAGDRGGGGPGG--GGP---GGGSAGG 57
PPPG P PP GG G G P GPP G+ R P G GP GG G
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQG 317
Query: 58 PSQPPG 63
P PPG
Sbjct: 318 PPPPPG 323
Score = 42.0 bits (97), Expect = 0.002
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPP-------GAGDRGGGGPGGGGPGGGSAGGPS 59
G P GPP P G G GG P GPP G +GG P G P G G P
Sbjct: 44 GNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 103
Query: 60 Q 60
Q
Sbjct: 104 Q 104
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 7 GGPPPGP---PPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
G PPPG PPP G + + G P GPP +GG P G P G GP PP
Sbjct: 91 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP---PQGGNQPQGPPPPPGKPQGP--PPQ 145
Query: 64 GG 65
GG
Sbjct: 146 GG 147
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/60 (43%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 2 SDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPP-GAGDRGGGGPGGGGPGGGSAGGPSQ 60
S S G P GPPP GG G PPPG P G +GG P G P G G P Q
Sbjct: 172 SSRSPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 227
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/61 (42%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 5 STGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGG 64
S G P GPPP GG G PPPG P GG G P G GP PP G
Sbjct: 237 SPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQG 290
Query: 65 G 65
G
Sbjct: 291 G 291
Score = 40.8 bits (94), Expect = 0.004
Identities = 26/60 (43%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 2 SDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPG-PPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
S S G P GPPP GG G PPPG P G +GG P G P G G P Q
Sbjct: 110 SPRSPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 165
Score = 37.4 bits (85), Expect = 0.049
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGG 65
G P G PP G + G P GPP +GG P G P G GP PP GG
Sbjct: 34 GNPQGAPPQGGNKPQGPPSPPGKPQGPP---PQGGNQPQGPPPPPGKPQGP--PPQGG 86
Score = 37.0 bits (84), Expect = 0.063
Identities = 56/175 (32%), Positives = 63/175 (36%), Gaps = 45/175 (25%)
Query: 396 GPPGPPGGP-GMPPGGRGRGRGQGNWGPP------GGEMTFSI--PTHKCGLVIGRGGEN 446
GPP PPG P G PP G + +G G P GG + S P K +GG
Sbjct: 255 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGG-- 312
Query: 447 VKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE--KIEGP------ 498
NQ G PP G P +G P Q + Q K +GP
Sbjct: 313 ----NQPQGP-------PPPPGKP-------QGPPPQGGNKPQGPPPPGKPQGPPPQGGS 354
Query: 499 -----LCPVGPGPGGPGPAG--PMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQG 546
P G G P G P GP P N P APP AG P PPQG
Sbjct: 355 KSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP-AGQPQGPPRPPQG 408
>gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens]
Length = 371
Score = 85.1 bits (209), Expect = 2e-16
Identities = 93/401 (23%), Positives = 158/401 (39%), Gaps = 90/401 (22%)
Query: 138 HPPPRTSMTEEYRVPDG---------------MVGLIIGRGGEQINKIQQDSGCKVQISP 182
HP P+ E +V +G VG IIG+ GE + K++++SG ++ IS
Sbjct: 24 HPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS- 82
Query: 183 DSGGLPERSVSLTGAPESVQKAKMML-----DDIVSRGRGGPPGQFHDNANGGQNGTVQE 237
G PER V++TG +++ KA M+ +DI++ P +
Sbjct: 83 -EGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS--------KPPVTLR 133
Query: 238 IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACE 297
+++PA + G +IGKGG IK+++E G ++ + D N + ++ + I G P + Q +
Sbjct: 134 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN-STERAVTISGTPDAIIQCVK 192
Query: 298 MVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 357
+ ++ E G +P + +G IQ
Sbjct: 193 QICVVMLESPP--------------KGATIPYRPKPASTPVIFAGGQAYTIQ-------- 230
Query: 358 FKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMP--PGGR---- 411
G I H PD+ + L Q P PP G P PG +
Sbjct: 231 -------GQYAIPH----PDQ-------LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 272
Query: 412 ---------GRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISR 462
G+ G + PP +IP G +IGR G + I Q +GA ++I+
Sbjct: 273 SSEEAQNLMGQSSGL-DASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 331
Query: 463 QLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVG 503
+ + + I G+P I A+ LI ++ + +G
Sbjct: 332 ATEGSSE---RQITITGTPANISLAQYLINARLTSEVTGMG 369
Score = 72.8 bits (177), Expect = 1e-12
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 52/236 (22%)
Query: 300 MDILRERDQGGFGDRNEYGSRIG-GGIDVPVPRH------SVGVVIGRSGEMIKKIQNDA 352
+ L Q FG R E S++ GG++V + VG +IG+ GE +KK++ ++
Sbjct: 18 LSTLSHHPQPQFGRRME--SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREES 75
Query: 353 GVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARII-----NDLLQSLRSGPPGPPGGPGMP 407
G RI + G PE+I I GP D A +I D++ S+ + P
Sbjct: 76 GARINISE--GNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPAT-------- 125
Query: 408 PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPN 467
P + +P +CG +IG+GG +K I + TGA V+++ + PN
Sbjct: 126 -------------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 468 GDPNFKLFIIRGSPQQ-IDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGP 522
+ I G+P I KQ+ +E P P G P+ P P
Sbjct: 173 STE--RAVTISGTPDAIIQCVKQICVVMLESP------------PKGATIPYRPKP 214
Score = 58.5 bits (140), Expect = 2e-08
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
Query: 105 FGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGG 164
F G+K L + E++ L Q + + PP + T E +P+ ++G IIGR G
Sbjct: 264 FPGEKLPLHSSE--EAQNLMGQSSGLDAS------PPAS--THELTIPNDLIGCIIGRQG 313
Query: 165 EQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLD 209
+IN+I+Q SG +++I+ + G ER +++TG P ++ A+ +++
Sbjct: 314 TKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 84.3 bits (207), Expect = 3e-16
Identities = 194/731 (26%), Positives = 234/731 (32%), Gaps = 126/731 (17%)
Query: 15 PPAGGGGGAGGAGGGPPP----GPPGA-GDRGGGGPGGG-GPGGGSAG-GPSQPPGGGGP 67
P A G GA G G P P GP G G RG GP G GP G S G GP PPG GP
Sbjct: 873 PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGP 932
Query: 68 GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQG 127
+ + G D + GF G+ G + QG
Sbjct: 933 QGPQGPVGFPGPKGPP--GPPGKDGLPGHPGQRGETGFQGKT-----GPPGPGGVVGPQG 985
Query: 128 DSISSQLGPI----HPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQ-QDSGCKVQISP 182
+ + GPI HP P E+ +P G G +G I +D ++ P
Sbjct: 986 PT--GETGPIGERGHPGPPGPPGEQ-GLP-GAAGKEGAKGDPGPQGISGKDGPAGLRGFP 1041
Query: 183 DSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPA 242
GLP GAP G GPPG G GT I +P
Sbjct: 1042 GERGLP----GAQGAPGLKG----------GEGPQGPPGPVGSPGERGSAGTAGPIGLPG 1087
Query: 243 -----GKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPLRIIGDPYKVQQAC 296
G G KG K Q AG +DG Q + P G P +
Sbjct: 1088 RPGPQGPPGPAGEKGAPGEKGPQGPAG------RDGVQGPVGLPGPAGPAGSPGEDGDKG 1141
Query: 297 EMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRI 356
E I +G GD+ E G G+ PV + G G + G+
Sbjct: 1142 E----IGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGP-----RGQQGMFG 1192
Query: 357 QFKQDDGT-------GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPG 409
Q K D+G GP + + GPP + GP GPPG PG P G
Sbjct: 1193 Q-KGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDV----------GPMGPPGPPG-PRG 1240
Query: 410 GRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGD 469
+G G GPPG + +G GE +A N + P G+
Sbjct: 1241 PQGPNGADGPQGPPGSVGSVG--------GVGEKGEPGEAGNPGPPGEAGVGG---PKGE 1289
Query: 470 PNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAG----PMGPFNPGPFNQ 525
RG + +GP GP G PGP G P P PGP Q
Sbjct: 1290 --------RGEKGEAGPPGAAGPPGAKGPPGDDGP-KGNPGPVGFPGDPGPPGEPGPAGQ 1340
Query: 526 GPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQ 585
G G P PP G P PP P AA A A +
Sbjct: 1341 DGVGGDKGEDGDPGQPGPPGPSGEAGPP-GPPGKRGPPGAAGAEGRQGEKGAKGEAGAEG 1399
Query: 586 QP--PGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQ-PQQPGAPPQQ 642
P GPV GP P +G P P G+ A GQ P P PP
Sbjct: 1400 PPGKTGPV-GPQGPAGKPGPEGLRGIPGPVGEQGLPGA-------AGQDGPPGPMGPPGL 1451
Query: 643 DYTKAWEEYYKKQAQVATGGGPG-----APPGSQPDYSAAWAEYYRQQ--AAYYGQTPGP 695
K G PG PPG Q + + A G PGP
Sbjct: 1452 PGLKG------DPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGP 1505
Query: 696 GGPQPPPTQQG 706
GP PP G
Sbjct: 1506 AGPLGPPGPPG 1516
Score = 80.9 bits (198), Expect = 4e-15
Identities = 180/661 (27%), Positives = 222/661 (33%), Gaps = 109/661 (16%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGSAGGPSQPPG-GG 65
PPGP G G G GG PG PGA GDRG G G G G GP PPG G
Sbjct: 581 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPG 640
Query: 66 GPGIRKDAFADAVQRARQIAAKIG-----GDAATTVNNSTPDF----GFGGQKRQLEDGD 116
G+R + D R + + G G T P G G K + G
Sbjct: 641 DDGMRGE---DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNM--GP 695
Query: 117 QPESKKLASQGD----SISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQ 172
Q E QG+ + GPI PP + G+ GL G +
Sbjct: 696 QGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGK----PGLAGLPGADGPPGHPGKEG 751
Query: 173 DSGCKVQISPDSGGLPERSVSLTGAPESVQKA---KMMLDDIVSRGRGGPPGQFHDNANG 229
SG K + P P+ + G P V+ A + + +G G PG D
Sbjct: 752 QSGEKGALGPPG---PQGPIGYPG-PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLK 807
Query: 230 GQNGTVQEI--------MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDK 281
G G V +I P G+AG G + + GV + G Q
Sbjct: 808 GDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQG----- 862
Query: 282 PLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRS 341
P G P G G E G+R G P PR G R
Sbjct: 863 PKGSTGFP-------------------GFPGANGEKGAR--GVAGKPGPRGQRGPTGPRG 901
Query: 342 GEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPP 401
+ G + D GP GP GPPGPP
Sbjct: 902 SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPG----------PKGPPGPP 951
Query: 402 GGPGMP--PGGRGRGRGQGNWGP--PGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAF 457
G G+P PG RG QG GP PGG + PT + G + RG + G
Sbjct: 952 GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLP 1011
Query: 458 VEISRQLPPNGDPNFKLFI-------IRGSPQQ-----IDHAKQLI-EEKIEGPLCPVG- 503
++ GDP + +RG P + A L E +GP PVG
Sbjct: 1012 GAAGKE-GAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 1070
Query: 504 PGP-GGPGPAGPMG-PFNPGPFNQGPPGAPPHAGGPPPHQYP--PQGWGNTYPQWQPPAP 559
PG G G AGP+G P PGP QGPPG P G P + P P G P P
Sbjct: 1071 PGERGSAGTAGPIGLPGRPGP--QGPPG-PAGEKGAPGEKGPQGPAGRDGVQGPVGLPGP 1127
Query: 560 HDPSKAAAAAADPN-----AAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTG 614
P+ + D + PPGP PG AP G +P P G
Sbjct: 1128 AGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP-PGLQGPVGAPGIAGGDGEPGPRG 1186
Query: 615 Q 615
Q
Sbjct: 1187 Q 1187
Score = 73.6 bits (179), Expect = 6e-13
Identities = 192/769 (24%), Positives = 250/769 (32%), Gaps = 154/769 (20%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGG------- 64
GPP PAG G G G P GPPG D G GP G PG A G PPG
Sbjct: 454 GPPGPAGPAGIMGPPGLQGPTGPPG--DPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFR 510
Query: 65 -GGPGIR------KDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQ 117
GG G + ++A A A+ + +IA + P G G + E GD
Sbjct: 511 YGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDP 570
Query: 118 PESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCK 177
QG GP P + G G GRG + + G K
Sbjct: 571 GPQGPRGVQGPP-----GPTGKPGKR----------GRPGADGGRG------MPGEPGAK 609
Query: 178 VQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQE 237
D GLP G P RG GPPG D+ G++G +
Sbjct: 610 GDRGFD--GLP-------GLPGDKGHRG-------ERGPQGPPGPPGDDGMRGEDGEIGP 653
Query: 238 IMIP--AGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDK-------------- 281
+P AG GL+ +G AGV G+ +
Sbjct: 654 RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 713
Query: 282 --PLRIIGDPYKVQQACEMVMDILRERD--QGGFGDRNEYGSRIGGGIDVPVPRHSVGVV 337
P IG P + + + L D G G + G + G + P P+ +G
Sbjct: 714 PGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK--GALGPPGPQGPIGYP 771
Query: 338 IGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGP 397
R + ++ G + + +D G + + G DR E + + GP
Sbjct: 772 GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKG--DRGE-----VGQIGPRGEDGP 824
Query: 398 PGPPG--GPGMPPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGENVKAI 450
GP G GP PG G+ +G G PG G T G G + + +
Sbjct: 825 EGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGV 884
Query: 451 NQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPG 510
+ G Q P G RGS + + G P GP PG G
Sbjct: 885 AGKPGP----RGQRGPTGP--------RGSRGARGPTGKPGPKGTSGGDGPPGP-PGERG 931
Query: 511 PAGPMGPFN-PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQ--PPAPHDPSKAAA 567
P GP GP PGP +GPPG PP G P H P G T Q + PP P
Sbjct: 932 PQGPQGPVGFPGP--KGPPG-PPGKDGLPGH---PGQRGETGFQGKTGPPGPG----GVV 981
Query: 568 AAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSD---------- 617
P + PPGP PG P A +G P P G S
Sbjct: 982 GPQGPTGETGPIGERGHPGPPGP-PGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGF 1040
Query: 618 -----YTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGG--------GP 664
A K G+ PQ P P ++ T G GP
Sbjct: 1041 PGERGLPGAQGAPGLKGGEGPQGPPGPVGSP---------GERGSAGTAGPIGLPGRPGP 1091
Query: 665 GAPPGSQPDYSAAWAEYYRQQAAYYGQT-----PGPGGPQPPPTQQGQQ 708
PPG + A + + A G PGP GP P + G +
Sbjct: 1092 QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK 1140
Score = 71.2 bits (173), Expect = 3e-12
Identities = 182/691 (26%), Positives = 226/691 (32%), Gaps = 113/691 (16%)
Query: 5 STGGPPPGPP---PPAGGGGGAGGAGGGPPPGPPG-------AGDRGGGGPGG--GGPGG 52
S G PPGPP P G G G G PPGPPG G RG G G G PG
Sbjct: 918 SGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGP 977
Query: 53 GSAGGPSQPPGGGGP-GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQ 111
G GP P G GP G R + + G + A G G+
Sbjct: 978 GGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGA---KGDPGPQGISGKDGP 1034
Query: 112 LEDGDQPESKKL--ASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLI--IGRGGEQ- 166
P + L A + GP PP E R G G I GR G Q
Sbjct: 1035 AGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGE-RGSAGTAGPIGLPGRPGPQG 1093
Query: 167 INKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDN 226
+ G + P + G P A +D +G G PGQ
Sbjct: 1094 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED-GDKGEIGEPGQKGSK 1152
Query: 227 ANGGQNGT--VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPL 283
+ G+NG + P G G+ G G + Q G K +G++ P+
Sbjct: 1153 GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG---DEGARGFPGPPGPI 1209
Query: 284 RIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSVGVV--IGR 340
+ G P + E D+ G G R G G D P P SVG V +G
Sbjct: 1210 GLQGLPGPPGEKGEN-GDVGPMGPPGPPGPRGPQGP---NGADGPQGPPGSVGSVGGVGE 1265
Query: 341 SGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPP-DRCEHAARIINDLLQSLRSGPPG 399
GE +AG GP A + GP +R E +GPPG
Sbjct: 1266 KGE-----PGEAG---------NPGPPGEAGVGGPKGERGEKG-----------EAGPPG 1300
Query: 400 PPGGPGM--PPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGENVKAINQQTG 455
G PG PPG G G G PG G P + G+ +G + G
Sbjct: 1301 AAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPG 1360
Query: 456 AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPM 515
S + P G P RG P + E+ +G GP PG GP GP
Sbjct: 1361 P----SGEAGPPGPPG-----KRGPPGAAGAEGRQGEKGAKGEAGAEGP-PGKTGPVGPQ 1410
Query: 516 GPF-NPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNA 574
GP PGP +G G P GP Q P G Q PP P P DP +
Sbjct: 1411 GPAGKPGP--EGLRGIP----GPVGEQGLPGAAG----QDGPPGPMGPPGLPGLKGDPGS 1460
Query: 575 AWAAYYSHYYQ--QPPGP-----------------------VPGPAPAPAAPPAQGEP-P 608
+ PPG +PGPA P G P P
Sbjct: 1461 KGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGP 1520
Query: 609 QPPPTGQSDYTKAWEEYYKKIGQQPQQPGAP 639
Q P + A ++ + P PG P
Sbjct: 1521 QGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP 1551
Score = 70.5 bits (171), Expect = 5e-12
Identities = 96/337 (28%), Positives = 116/337 (34%), Gaps = 67/337 (19%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP GP G PG PG +G +G GPPG P G+ GG+
Sbjct: 1126 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPP-GLQGPVGAPGIA---GGDGE 1181
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIE-GPLCPVGPGP 506
Q G F + GD + F P + EK E G + P+GP P
Sbjct: 1182 PGPRGQQGMFGQ-------KGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGP-P 1233
Query: 507 GGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPA--PHDPSK 564
G PGP GP GP N QGPPG+ GG P + GN P + P
Sbjct: 1234 GPPGPRGPQGP-NGADGPQGPPGSVGSVGGVGEKGEPGEA-GNPGPPGEAGVGGPKGERG 1291
Query: 565 AAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAAPPAQGEPPQPPPTGQSDYT 619
A P AA + PPG PGP P P G P +P P GQ
Sbjct: 1292 EKGEAGPPGAAGPPGA----KGPPGDDGPKGNPGPVGFPGDP---GPPGEPGPAGQDGVG 1344
Query: 620 KAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWA 679
E P QPG P GP PPG + AA A
Sbjct: 1345 GDKGE-----DGDPGQPGPPGPSGEA-----------------GPPGPPGKRGPPGAAGA 1382
Query: 680 EYYRQQAAYYGQT--------PGPGGPQPPPTQQGQQ 708
E + + G+ GP GPQ P + G +
Sbjct: 1383 EGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPE 1419
Score = 60.1 bits (144), Expect = 7e-09
Identities = 90/355 (25%), Positives = 122/355 (34%), Gaps = 70/355 (19%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP G PG G+P PG G+ +G GPPG + P + G+ +G + V
Sbjct: 727 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPR-GV---KGADGV 782
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGP 506
+ + G E +G P FK + ++G ++ E+ EGP GP
Sbjct: 783 RGLKGSKGEKGE-------DGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGP-T 834
Query: 507 GGPGPAGPMG-------PFNPG-PFNQGPPGAPPHAGGP----------------PPHQY 542
G PGP+G G P PG P QGP G+ G P P Q
Sbjct: 835 GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQR 894
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV--PGPAPAPAA 600
P G + P P + P Q P GPV PGP P
Sbjct: 895 GPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPG----ERGPQGPQGPVGFPGPKGPPGP 950
Query: 601 PPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVAT 660
P G P P G++ + Q PP + + +
Sbjct: 951 PGKDGLPGHPGQRGETGF---------------QGKTGPPGPGGVVGPQGPTGETGPIGE 995
Query: 661 GG--GPGAPPGSQPDYSAAWAEYYRQQAAYYGQT--PGPGGPQPPPTQQGQQQAQ 711
G GP PPG Q AA E + G + GP G + P ++G AQ
Sbjct: 996 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQ 1050
Score = 56.6 bits (135), Expect = 8e-08
Identities = 68/235 (28%), Positives = 85/235 (36%), Gaps = 62/235 (26%)
Query: 495 IEGPLCPVGPGP--GGPGPAGPMGPFNPG-PFNQGPPGAPPHAG-----GPP------PH 540
+EGP P GP G PG GP GP PG P ++GPPG P G GPP P
Sbjct: 452 VEGPPGPAGPAGIMGPPGLQGPTGP--PGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPF 509
Query: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPA 595
+Y G P ++ A A A A A + PPGP+ PGP
Sbjct: 510 RYGGDG---------SKGPTISAQEAQAQAILQQARIAL-----RGPPGPMGLTGRPGPV 555
Query: 596 PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQ 655
P + A+GE P P G Q P P P K+
Sbjct: 556 GGPGSSGAKGESGDPGPQGPRGV------------QGPPGPTGKP------------GKR 591
Query: 656 AQVATGGGPGAP--PGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
+ GG G P PG++ D + G+ GP GP PP G +
Sbjct: 592 GRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGER-GPQGPPGPPGDDGMR 645
Score = 50.4 bits (119), Expect = 6e-06
Identities = 87/325 (26%), Positives = 110/325 (33%), Gaps = 55/325 (16%)
Query: 393 LRSGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGG-ENVKA 449
L GPPGP G G+ PPG QG GPPG P GR G
Sbjct: 451 LVEGPPGPAGPAGIMGPPGL------QGPTGPPGDPGDRGPP--------GRPGLPGADG 496
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVG----PG 505
+ G + + + +G K I Q Q + GP P+G PG
Sbjct: 497 LPGPPGTMLMLPFRYGGDGS---KGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPG 553
Query: 506 P-GGPGPAGPMGPF-NPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPS 563
P GGPG +G G +PGP QGP G GPP P G P +P
Sbjct: 554 PVGGPGSSGAKGESGDPGP--QGPRGVQ----GPPGPTGKPGKRGRPGADGGRGMPGEPG 607
Query: 564 KAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWE 623
D H ++ P PGP P +GE + P G E
Sbjct: 608 AKGDRGFDGLPGLPGDKGHRGERGPQGPPGP---PGDDGMRGEDGEIGPRGLPG-----E 659
Query: 624 EYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR 683
+ + PGAP Q + + + G PG PPG Q +
Sbjct: 660 AGPRGLLGPRGTPGAPGQPGMAGV-DGPPGPKGNMGPQGEPG-PPGQQGNPGPQ------ 711
Query: 684 QQAAYYGQTPGPGGPQPPPTQQGQQ 708
PGP GP PP ++G Q
Sbjct: 712 -------GLPGPQGPIGPPGEKGPQ 729
Score = 43.5 bits (101), Expect = 7e-04
Identities = 27/61 (44%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQPPGGGGP 67
G P G GG G AG PPGPPG G G G GP G G +G P P G P
Sbjct: 1492 GSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP 1551
Query: 68 G 68
G
Sbjct: 1552 G 1552
Score = 41.2 bits (95), Expect = 0.003
Identities = 31/78 (39%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 3 DYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGA-------GDRGGGGPGG--GGPGGG 53
D G P P PP G G AG G GPPGA G++G G G G PG
Sbjct: 1346 DKGEDGDPGQPGPP-GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKT 1404
Query: 54 SAGGPSQPPGGGGP-GIR 70
GP P G GP G+R
Sbjct: 1405 GPVGPQGPAGKPGPEGLR 1422
Score = 39.7 bits (91), Expect = 0.010
Identities = 53/169 (31%), Positives = 65/169 (38%), Gaps = 37/169 (21%)
Query: 8 GPPPGPPPPA--GGGGGAGGAGGGPPPGPPG-AGDRG----GGGPGGGGPGG-----GSA 55
GP P PP G G G G P GPPG G +G G PG GP G G +
Sbjct: 694 GPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQS 753
Query: 56 G-----GPSQPPGG-GGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQK 109
G GP P G G PG R AD V+ + + G D GF G K
Sbjct: 754 GEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGED------------GFPGFK 801
Query: 110 RQLE-DGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVG 157
+ GD+ E ++ +G+ GP P R T + P G G
Sbjct: 802 GDMGLKGDRGEVGQIGPRGED-----GPEGPKGRAGPTGD-PGPSGQAG 844
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRG-GGGPGGGGPGG 52
PPGPP G G G G P G GD G G PG GP G
Sbjct: 1511 PPGPPGLPGPQGPKGNKGSTGPAGQ--KGDSGLPGPPGSPGPPG 1552
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 84.3 bits (207), Expect = 3e-16
Identities = 194/731 (26%), Positives = 234/731 (32%), Gaps = 126/731 (17%)
Query: 15 PPAGGGGGAGGAGGGPPP----GPPGA-GDRGGGGPGGG-GPGGGSAG-GPSQPPGGGGP 67
P A G GA G G P P GP G G RG GP G GP G S G GP PPG GP
Sbjct: 822 PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGP 881
Query: 68 GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQG 127
+ + G D + GF G+ G + QG
Sbjct: 882 QGPQGPVGFPGPKGPP--GPPGKDGLPGHPGQRGETGFQGKT-----GPPGPGGVVGPQG 934
Query: 128 DSISSQLGPI----HPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQ-QDSGCKVQISP 182
+ + GPI HP P E+ +P G G +G I +D ++ P
Sbjct: 935 PT--GETGPIGERGHPGPPGPPGEQ-GLP-GAAGKEGAKGDPGPQGISGKDGPAGLRGFP 990
Query: 183 DSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPA 242
GLP GAP G GPPG G GT I +P
Sbjct: 991 GERGLP----GAQGAPGLKG----------GEGPQGPPGPVGSPGERGSAGTAGPIGLPG 1036
Query: 243 -----GKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPLRIIGDPYKVQQAC 296
G G KG K Q AG +DG Q + P G P +
Sbjct: 1037 RPGPQGPPGPAGEKGAPGEKGPQGPAG------RDGVQGPVGLPGPAGPAGSPGEDGDKG 1090
Query: 297 EMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRI 356
E I +G GD+ E G G+ PV + G G + G+
Sbjct: 1091 E----IGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGP-----RGQQGMFG 1141
Query: 357 QFKQDDGT-------GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPG 409
Q K D+G GP + + GPP + GP GPPG PG P G
Sbjct: 1142 Q-KGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDV----------GPMGPPGPPG-PRG 1189
Query: 410 GRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGD 469
+G G GPPG + +G GE +A N + P G+
Sbjct: 1190 PQGPNGADGPQGPPGSVGSVG--------GVGEKGEPGEAGNPGPPGEAGVGG---PKGE 1238
Query: 470 PNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAG----PMGPFNPGPFNQ 525
RG + +GP GP G PGP G P P PGP Q
Sbjct: 1239 --------RGEKGEAGPPGAAGPPGAKGPPGDDGP-KGNPGPVGFPGDPGPPGEPGPAGQ 1289
Query: 526 GPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQ 585
G G P PP G P PP P AA A A +
Sbjct: 1290 DGVGGDKGEDGDPGQPGPPGPSGEAGPP-GPPGKRGPPGAAGAEGRQGEKGAKGEAGAEG 1348
Query: 586 QP--PGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQ-PQQPGAPPQQ 642
P GPV GP P +G P P G+ A GQ P P PP
Sbjct: 1349 PPGKTGPV-GPQGPAGKPGPEGLRGIPGPVGEQGLPGA-------AGQDGPPGPMGPPGL 1400
Query: 643 DYTKAWEEYYKKQAQVATGGGPG-----APPGSQPDYSAAWAEYYRQQ--AAYYGQTPGP 695
K G PG PPG Q + + A G PGP
Sbjct: 1401 PGLKG------DPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGP 1454
Query: 696 GGPQPPPTQQG 706
GP PP G
Sbjct: 1455 AGPLGPPGPPG 1465
Score = 80.9 bits (198), Expect = 4e-15
Identities = 180/661 (27%), Positives = 222/661 (33%), Gaps = 109/661 (16%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGSAGGPSQPPG-GG 65
PPGP G G G GG PG PGA GDRG G G G G GP PPG G
Sbjct: 530 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPG 589
Query: 66 GPGIRKDAFADAVQRARQIAAKIG-----GDAATTVNNSTPDF----GFGGQKRQLEDGD 116
G+R + D R + + G G T P G G K + G
Sbjct: 590 DDGMRGE---DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNM--GP 644
Query: 117 QPESKKLASQGD----SISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQ 172
Q E QG+ + GPI PP + G+ GL G +
Sbjct: 645 QGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGK----PGLAGLPGADGPPGHPGKEG 700
Query: 173 DSGCKVQISPDSGGLPERSVSLTGAPESVQKA---KMMLDDIVSRGRGGPPGQFHDNANG 229
SG K + P P+ + G P V+ A + + +G G PG D
Sbjct: 701 QSGEKGALGPPG---PQGPIGYPG-PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLK 756
Query: 230 GQNGTVQEI--------MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDK 281
G G V +I P G+AG G + + GV + G Q
Sbjct: 757 GDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQG----- 811
Query: 282 PLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRS 341
P G P G G E G+R G P PR G R
Sbjct: 812 PKGSTGFP-------------------GFPGANGEKGAR--GVAGKPGPRGQRGPTGPRG 850
Query: 342 GEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPP 401
+ G + D GP GP GPPGPP
Sbjct: 851 SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPG----------PKGPPGPP 900
Query: 402 GGPGMP--PGGRGRGRGQGNWGP--PGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAF 457
G G+P PG RG QG GP PGG + PT + G + RG + G
Sbjct: 901 GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLP 960
Query: 458 VEISRQLPPNGDPNFKLFI-------IRGSPQQ-----IDHAKQLI-EEKIEGPLCPVG- 503
++ GDP + +RG P + A L E +GP PVG
Sbjct: 961 GAAGKE-GAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 1019
Query: 504 PGP-GGPGPAGPMG-PFNPGPFNQGPPGAPPHAGGPPPHQYP--PQGWGNTYPQWQPPAP 559
PG G G AGP+G P PGP QGPPG P G P + P P G P P
Sbjct: 1020 PGERGSAGTAGPIGLPGRPGP--QGPPG-PAGEKGAPGEKGPQGPAGRDGVQGPVGLPGP 1076
Query: 560 HDPSKAAAAAADPN-----AAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTG 614
P+ + D + PPGP PG AP G +P P G
Sbjct: 1077 AGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP-PGLQGPVGAPGIAGGDGEPGPRG 1135
Query: 615 Q 615
Q
Sbjct: 1136 Q 1136
Score = 73.6 bits (179), Expect = 6e-13
Identities = 192/769 (24%), Positives = 250/769 (32%), Gaps = 154/769 (20%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGG------- 64
GPP PAG G G G P GPPG D G GP G PG A G PPG
Sbjct: 403 GPPGPAGPAGIMGPPGLQGPTGPPG--DPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFR 459
Query: 65 -GGPGIR------KDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQ 117
GG G + ++A A A+ + +IA + P G G + E GD
Sbjct: 460 YGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDP 519
Query: 118 PESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCK 177
QG GP P + G G GRG + + G K
Sbjct: 520 GPQGPRGVQGPP-----GPTGKPGKR----------GRPGADGGRG------MPGEPGAK 558
Query: 178 VQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQE 237
D GLP G P RG GPPG D+ G++G +
Sbjct: 559 GDRGFD--GLP-------GLPGDKGHRG-------ERGPQGPPGPPGDDGMRGEDGEIGP 602
Query: 238 IMIP--AGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDK-------------- 281
+P AG GL+ +G AGV G+ +
Sbjct: 603 RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 662
Query: 282 --PLRIIGDPYKVQQACEMVMDILRERD--QGGFGDRNEYGSRIGGGIDVPVPRHSVGVV 337
P IG P + + + L D G G + G + G + P P+ +G
Sbjct: 663 PGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK--GALGPPGPQGPIGYP 720
Query: 338 IGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGP 397
R + ++ G + + +D G + + G DR E + + GP
Sbjct: 721 GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKG--DRGE-----VGQIGPRGEDGP 773
Query: 398 PGPPG--GPGMPPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGENVKAI 450
GP G GP PG G+ +G G PG G T G G + + +
Sbjct: 774 EGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGV 833
Query: 451 NQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPG 510
+ G Q P G RGS + + G P GP PG G
Sbjct: 834 AGKPGP----RGQRGPTGP--------RGSRGARGPTGKPGPKGTSGGDGPPGP-PGERG 880
Query: 511 PAGPMGPFN-PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQ--PPAPHDPSKAAA 567
P GP GP PGP +GPPG PP G P H P G T Q + PP P
Sbjct: 881 PQGPQGPVGFPGP--KGPPG-PPGKDGLPGH---PGQRGETGFQGKTGPPGPG----GVV 930
Query: 568 AAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSD---------- 617
P + PPGP PG P A +G P P G S
Sbjct: 931 GPQGPTGETGPIGERGHPGPPGP-PGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGF 989
Query: 618 -----YTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGG--------GP 664
A K G+ PQ P P ++ T G GP
Sbjct: 990 PGERGLPGAQGAPGLKGGEGPQGPPGPVGSP---------GERGSAGTAGPIGLPGRPGP 1040
Query: 665 GAPPGSQPDYSAAWAEYYRQQAAYYGQT-----PGPGGPQPPPTQQGQQ 708
PPG + A + + A G PGP GP P + G +
Sbjct: 1041 QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK 1089
Score = 71.2 bits (173), Expect = 3e-12
Identities = 182/691 (26%), Positives = 226/691 (32%), Gaps = 113/691 (16%)
Query: 5 STGGPPPGPP---PPAGGGGGAGGAGGGPPPGPPG-------AGDRGGGGPGG--GGPGG 52
S G PPGPP P G G G G PPGPPG G RG G G G PG
Sbjct: 867 SGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGP 926
Query: 53 GSAGGPSQPPGGGGP-GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQ 111
G GP P G GP G R + + G + A G G+
Sbjct: 927 GGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGA---KGDPGPQGISGKDGP 983
Query: 112 LEDGDQPESKKL--ASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLI--IGRGGEQ- 166
P + L A + GP PP E R G G I GR G Q
Sbjct: 984 AGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGE-RGSAGTAGPIGLPGRPGPQG 1042
Query: 167 INKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDN 226
+ G + P + G P A +D +G G PGQ
Sbjct: 1043 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED-GDKGEIGEPGQKGSK 1101
Query: 227 ANGGQNGT--VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPL 283
+ G+NG + P G G+ G G + Q G K +G++ P+
Sbjct: 1102 GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG---DEGARGFPGPPGPI 1158
Query: 284 RIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSVGVV--IGR 340
+ G P + E D+ G G R G G D P P SVG V +G
Sbjct: 1159 GLQGLPGPPGEKGEN-GDVGPMGPPGPPGPRGPQGP---NGADGPQGPPGSVGSVGGVGE 1214
Query: 341 SGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPP-DRCEHAARIINDLLQSLRSGPPG 399
GE +AG GP A + GP +R E +GPPG
Sbjct: 1215 KGE-----PGEAG---------NPGPPGEAGVGGPKGERGEKG-----------EAGPPG 1249
Query: 400 PPGGPGM--PPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGENVKAINQQTG 455
G PG PPG G G G PG G P + G+ +G + G
Sbjct: 1250 AAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPG 1309
Query: 456 AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPM 515
S + P G P RG P + E+ +G GP PG GP GP
Sbjct: 1310 P----SGEAGPPGPPG-----KRGPPGAAGAEGRQGEKGAKGEAGAEGP-PGKTGPVGPQ 1359
Query: 516 GPF-NPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNA 574
GP PGP +G G P GP Q P G Q PP P P DP +
Sbjct: 1360 GPAGKPGP--EGLRGIP----GPVGEQGLPGAAG----QDGPPGPMGPPGLPGLKGDPGS 1409
Query: 575 AWAAYYSHYYQ--QPPGP-----------------------VPGPAPAPAAPPAQGEP-P 608
+ PPG +PGPA P G P P
Sbjct: 1410 KGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGP 1469
Query: 609 QPPPTGQSDYTKAWEEYYKKIGQQPQQPGAP 639
Q P + A ++ + P PG P
Sbjct: 1470 QGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP 1500
Score = 70.5 bits (171), Expect = 5e-12
Identities = 96/337 (28%), Positives = 116/337 (34%), Gaps = 67/337 (19%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP GP G PG PG +G +G GPPG P G+ GG+
Sbjct: 1075 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPP-GLQGPVGAPGIA---GGDGE 1130
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIE-GPLCPVGPGP 506
Q G F + GD + F P + EK E G + P+GP P
Sbjct: 1131 PGPRGQQGMFGQ-------KGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGP-P 1182
Query: 507 GGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPA--PHDPSK 564
G PGP GP GP N QGPPG+ GG P + GN P + P
Sbjct: 1183 GPPGPRGPQGP-NGADGPQGPPGSVGSVGGVGEKGEPGEA-GNPGPPGEAGVGGPKGERG 1240
Query: 565 AAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAAPPAQGEPPQPPPTGQSDYT 619
A P AA + PPG PGP P P G P +P P GQ
Sbjct: 1241 EKGEAGPPGAAGPPGA----KGPPGDDGPKGNPGPVGFPGDP---GPPGEPGPAGQDGVG 1293
Query: 620 KAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWA 679
E P QPG P GP PPG + AA A
Sbjct: 1294 GDKGE-----DGDPGQPGPPGPSGEA-----------------GPPGPPGKRGPPGAAGA 1331
Query: 680 EYYRQQAAYYGQT--------PGPGGPQPPPTQQGQQ 708
E + + G+ GP GPQ P + G +
Sbjct: 1332 EGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPE 1368
Score = 60.1 bits (144), Expect = 7e-09
Identities = 90/355 (25%), Positives = 122/355 (34%), Gaps = 70/355 (19%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP G PG G+P PG G+ +G GPPG + P + G+ +G + V
Sbjct: 676 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPR-GV---KGADGV 731
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGP 506
+ + G E +G P FK + ++G ++ E+ EGP GP
Sbjct: 732 RGLKGSKGEKGE-------DGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGP-T 783
Query: 507 GGPGPAGPMG-------PFNPG-PFNQGPPGAPPHAGGP----------------PPHQY 542
G PGP+G G P PG P QGP G+ G P P Q
Sbjct: 784 GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQR 843
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV--PGPAPAPAA 600
P G + P P + P Q P GPV PGP P
Sbjct: 844 GPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPG----ERGPQGPQGPVGFPGPKGPPGP 899
Query: 601 PPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVAT 660
P G P P G++ + Q PP + + +
Sbjct: 900 PGKDGLPGHPGQRGETGF---------------QGKTGPPGPGGVVGPQGPTGETGPIGE 944
Query: 661 GG--GPGAPPGSQPDYSAAWAEYYRQQAAYYGQT--PGPGGPQPPPTQQGQQQAQ 711
G GP PPG Q AA E + G + GP G + P ++G AQ
Sbjct: 945 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQ 999
Score = 56.6 bits (135), Expect = 8e-08
Identities = 68/235 (28%), Positives = 85/235 (36%), Gaps = 62/235 (26%)
Query: 495 IEGPLCPVGPGP--GGPGPAGPMGPFNPG-PFNQGPPGAPPHAG-----GPP------PH 540
+EGP P GP G PG GP GP PG P ++GPPG P G GPP P
Sbjct: 401 VEGPPGPAGPAGIMGPPGLQGPTGP--PGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPF 458
Query: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPA 595
+Y G P ++ A A A A A + PPGP+ PGP
Sbjct: 459 RYGGDG---------SKGPTISAQEAQAQAILQQARIAL-----RGPPGPMGLTGRPGPV 504
Query: 596 PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQ 655
P + A+GE P P G Q P P P K+
Sbjct: 505 GGPGSSGAKGESGDPGPQGPRGV------------QGPPGPTGKP------------GKR 540
Query: 656 AQVATGGGPGAP--PGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
+ GG G P PG++ D + G+ GP GP PP G +
Sbjct: 541 GRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGER-GPQGPPGPPGDDGMR 594
Score = 50.4 bits (119), Expect = 6e-06
Identities = 87/325 (26%), Positives = 110/325 (33%), Gaps = 55/325 (16%)
Query: 393 LRSGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGG-ENVKA 449
L GPPGP G G+ PPG QG GPPG P GR G
Sbjct: 400 LVEGPPGPAGPAGIMGPPGL------QGPTGPPGDPGDRGPP--------GRPGLPGADG 445
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVG----PG 505
+ G + + + +G K I Q Q + GP P+G PG
Sbjct: 446 LPGPPGTMLMLPFRYGGDGS---KGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPG 502
Query: 506 P-GGPGPAGPMGPF-NPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPS 563
P GGPG +G G +PGP QGP G GPP P G P +P
Sbjct: 503 PVGGPGSSGAKGESGDPGP--QGPRGVQ----GPPGPTGKPGKRGRPGADGGRGMPGEPG 556
Query: 564 KAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWE 623
D H ++ P PGP P +GE + P G E
Sbjct: 557 AKGDRGFDGLPGLPGDKGHRGERGPQGPPGP---PGDDGMRGEDGEIGPRGLPG-----E 608
Query: 624 EYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR 683
+ + PGAP Q + + + G PG PPG Q +
Sbjct: 609 AGPRGLLGPRGTPGAPGQPGMAGV-DGPPGPKGNMGPQGEPG-PPGQQGNPGPQ------ 660
Query: 684 QQAAYYGQTPGPGGPQPPPTQQGQQ 708
PGP GP PP ++G Q
Sbjct: 661 -------GLPGPQGPIGPPGEKGPQ 678
Score = 43.5 bits (101), Expect = 7e-04
Identities = 27/61 (44%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQPPGGGGP 67
G P G GG G AG PPGPPG G G G GP G G +G P P G P
Sbjct: 1441 GSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP 1500
Query: 68 G 68
G
Sbjct: 1501 G 1501
Score = 41.2 bits (95), Expect = 0.003
Identities = 31/78 (39%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 3 DYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGA-------GDRGGGGPGG--GGPGGG 53
D G P P PP G G AG G GPPGA G++G G G G PG
Sbjct: 1295 DKGEDGDPGQPGPP-GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKT 1353
Query: 54 SAGGPSQPPGGGGP-GIR 70
GP P G GP G+R
Sbjct: 1354 GPVGPQGPAGKPGPEGLR 1371
Score = 39.7 bits (91), Expect = 0.010
Identities = 53/169 (31%), Positives = 65/169 (38%), Gaps = 37/169 (21%)
Query: 8 GPPPGPPPPA--GGGGGAGGAGGGPPPGPPG-AGDRG----GGGPGGGGPGG-----GSA 55
GP P PP G G G G P GPPG G +G G PG GP G G +
Sbjct: 643 GPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQS 702
Query: 56 G-----GPSQPPGG-GGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQK 109
G GP P G G PG R AD V+ + + G D GF G K
Sbjct: 703 GEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGED------------GFPGFK 750
Query: 110 RQLE-DGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVG 157
+ GD+ E ++ +G+ GP P R T + P G G
Sbjct: 751 GDMGLKGDRGEVGQIGPRGED-----GPEGPKGRAGPTGD-PGPSGQAG 793
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRG-GGGPGGGGPGG 52
PPGPP G G G G P G GD G G PG GP G
Sbjct: 1460 PPGPPGLPGPQGPKGNKGSTGPAGQ--KGDSGLPGPPGSPGPPG 1501
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 84.3 bits (207), Expect = 3e-16
Identities = 194/731 (26%), Positives = 234/731 (32%), Gaps = 126/731 (17%)
Query: 15 PPAGGGGGAGGAGGGPPP----GPPGA-GDRGGGGPGGG-GPGGGSAG-GPSQPPGGGGP 67
P A G GA G G P P GP G G RG GP G GP G S G GP PPG GP
Sbjct: 861 PGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGP 920
Query: 68 GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQG 127
+ + G D + GF G+ G + QG
Sbjct: 921 QGPQGPVGFPGPKGPP--GPPGKDGLPGHPGQRGETGFQGKT-----GPPGPGGVVGPQG 973
Query: 128 DSISSQLGPI----HPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQ-QDSGCKVQISP 182
+ + GPI HP P E+ +P G G +G I +D ++ P
Sbjct: 974 PT--GETGPIGERGHPGPPGPPGEQ-GLP-GAAGKEGAKGDPGPQGISGKDGPAGLRGFP 1029
Query: 183 DSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPA 242
GLP GAP G GPPG G GT I +P
Sbjct: 1030 GERGLP----GAQGAPGLKG----------GEGPQGPPGPVGSPGERGSAGTAGPIGLPG 1075
Query: 243 -----GKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPLRIIGDPYKVQQAC 296
G G KG K Q AG +DG Q + P G P +
Sbjct: 1076 RPGPQGPPGPAGEKGAPGEKGPQGPAG------RDGVQGPVGLPGPAGPAGSPGEDGDKG 1129
Query: 297 EMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRI 356
E I +G GD+ E G G+ PV + G G + G+
Sbjct: 1130 E----IGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGP-----RGQQGMFG 1180
Query: 357 QFKQDDGT-------GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPG 409
Q K D+G GP + + GPP + GP GPPG PG P G
Sbjct: 1181 Q-KGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDV----------GPMGPPGPPG-PRG 1228
Query: 410 GRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGD 469
+G G GPPG + +G GE +A N + P G+
Sbjct: 1229 PQGPNGADGPQGPPGSVGSVG--------GVGEKGEPGEAGNPGPPGEAGVGG---PKGE 1277
Query: 470 PNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAG----PMGPFNPGPFNQ 525
RG + +GP GP G PGP G P P PGP Q
Sbjct: 1278 --------RGEKGEAGPPGAAGPPGAKGPPGDDGP-KGNPGPVGFPGDPGPPGEPGPAGQ 1328
Query: 526 GPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQ 585
G G P PP G P PP P AA A A +
Sbjct: 1329 DGVGGDKGEDGDPGQPGPPGPSGEAGPP-GPPGKRGPPGAAGAEGRQGEKGAKGEAGAEG 1387
Query: 586 QP--PGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQ-PQQPGAPPQQ 642
P GPV GP P +G P P G+ A GQ P P PP
Sbjct: 1388 PPGKTGPV-GPQGPAGKPGPEGLRGIPGPVGEQGLPGA-------AGQDGPPGPMGPPGL 1439
Query: 643 DYTKAWEEYYKKQAQVATGGGPG-----APPGSQPDYSAAWAEYYRQQ--AAYYGQTPGP 695
K G PG PPG Q + + A G PGP
Sbjct: 1440 PGLKG------DPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGP 1493
Query: 696 GGPQPPPTQQG 706
GP PP G
Sbjct: 1494 AGPLGPPGPPG 1504
Score = 80.9 bits (198), Expect = 4e-15
Identities = 180/661 (27%), Positives = 222/661 (33%), Gaps = 109/661 (16%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGSAGGPSQPPG-GG 65
PPGP G G G GG PG PGA GDRG G G G G GP PPG G
Sbjct: 569 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPG 628
Query: 66 GPGIRKDAFADAVQRARQIAAKIG-----GDAATTVNNSTPDF----GFGGQKRQLEDGD 116
G+R + D R + + G G T P G G K + G
Sbjct: 629 DDGMRGE---DGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNM--GP 683
Query: 117 QPESKKLASQGD----SISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQ 172
Q E QG+ + GPI PP + G+ GL G +
Sbjct: 684 QGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGK----PGLAGLPGADGPPGHPGKEG 739
Query: 173 DSGCKVQISPDSGGLPERSVSLTGAPESVQKA---KMMLDDIVSRGRGGPPGQFHDNANG 229
SG K + P P+ + G P V+ A + + +G G PG D
Sbjct: 740 QSGEKGALGPPG---PQGPIGYPG-PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLK 795
Query: 230 GQNGTVQEI--------MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDK 281
G G V +I P G+AG G + + GV + G Q
Sbjct: 796 GDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQG----- 850
Query: 282 PLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRS 341
P G P G G E G+R G P PR G R
Sbjct: 851 PKGSTGFP-------------------GFPGANGEKGAR--GVAGKPGPRGQRGPTGPRG 889
Query: 342 GEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPP 401
+ G + D GP GP GPPGPP
Sbjct: 890 SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPG----------PKGPPGPP 939
Query: 402 GGPGMP--PGGRGRGRGQGNWGP--PGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAF 457
G G+P PG RG QG GP PGG + PT + G + RG + G
Sbjct: 940 GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLP 999
Query: 458 VEISRQLPPNGDPNFKLFI-------IRGSPQQ-----IDHAKQLI-EEKIEGPLCPVG- 503
++ GDP + +RG P + A L E +GP PVG
Sbjct: 1000 GAAGKE-GAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 1058
Query: 504 PGP-GGPGPAGPMG-PFNPGPFNQGPPGAPPHAGGPPPHQYP--PQGWGNTYPQWQPPAP 559
PG G G AGP+G P PGP QGPPG P G P + P P G P P
Sbjct: 1059 PGERGSAGTAGPIGLPGRPGP--QGPPG-PAGEKGAPGEKGPQGPAGRDGVQGPVGLPGP 1115
Query: 560 HDPSKAAAAAADPN-----AAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTG 614
P+ + D + PPGP PG AP G +P P G
Sbjct: 1116 AGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP-PGLQGPVGAPGIAGGDGEPGPRG 1174
Query: 615 Q 615
Q
Sbjct: 1175 Q 1175
Score = 73.6 bits (179), Expect = 6e-13
Identities = 192/769 (24%), Positives = 250/769 (32%), Gaps = 154/769 (20%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGG------- 64
GPP PAG G G G P GPPG D G GP G PG A G PPG
Sbjct: 442 GPPGPAGPAGIMGPPGLQGPTGPPG--DPGDRGPPGR-PGLPGADGLPGPPGTMLMLPFR 498
Query: 65 -GGPGIR------KDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQ 117
GG G + ++A A A+ + +IA + P G G + E GD
Sbjct: 499 YGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDP 558
Query: 118 PESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCK 177
QG GP P + G G GRG + + G K
Sbjct: 559 GPQGPRGVQGPP-----GPTGKPGKR----------GRPGADGGRG------MPGEPGAK 597
Query: 178 VQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQE 237
D GLP G P RG GPPG D+ G++G +
Sbjct: 598 GDRGFD--GLP-------GLPGDKGHRG-------ERGPQGPPGPPGDDGMRGEDGEIGP 641
Query: 238 IMIP--AGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDK-------------- 281
+P AG GL+ +G AGV G+ +
Sbjct: 642 RGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGL 701
Query: 282 --PLRIIGDPYKVQQACEMVMDILRERD--QGGFGDRNEYGSRIGGGIDVPVPRHSVGVV 337
P IG P + + + L D G G + G + G + P P+ +G
Sbjct: 702 PGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEK--GALGPPGPQGPIGYP 759
Query: 338 IGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGP 397
R + ++ G + + +D G + + G DR E + + GP
Sbjct: 760 GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKG--DRGE-----VGQIGPRGEDGP 812
Query: 398 PGPPG--GPGMPPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGENVKAI 450
GP G GP PG G+ +G G PG G T G G + + +
Sbjct: 813 EGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGV 872
Query: 451 NQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPG 510
+ G Q P G RGS + + G P GP PG G
Sbjct: 873 AGKPGP----RGQRGPTGP--------RGSRGARGPTGKPGPKGTSGGDGPPGP-PGERG 919
Query: 511 PAGPMGPFN-PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQ--PPAPHDPSKAAA 567
P GP GP PGP +GPPG PP G P H P G T Q + PP P
Sbjct: 920 PQGPQGPVGFPGP--KGPPG-PPGKDGLPGH---PGQRGETGFQGKTGPPGPG----GVV 969
Query: 568 AAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSD---------- 617
P + PPGP PG P A +G P P G S
Sbjct: 970 GPQGPTGETGPIGERGHPGPPGP-PGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGF 1028
Query: 618 -----YTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGG--------GP 664
A K G+ PQ P P ++ T G GP
Sbjct: 1029 PGERGLPGAQGAPGLKGGEGPQGPPGPVGSP---------GERGSAGTAGPIGLPGRPGP 1079
Query: 665 GAPPGSQPDYSAAWAEYYRQQAAYYGQT-----PGPGGPQPPPTQQGQQ 708
PPG + A + + A G PGP GP P + G +
Sbjct: 1080 QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK 1128
Score = 71.2 bits (173), Expect = 3e-12
Identities = 182/691 (26%), Positives = 226/691 (32%), Gaps = 113/691 (16%)
Query: 5 STGGPPPGPP---PPAGGGGGAGGAGGGPPPGPPG-------AGDRGGGGPGG--GGPGG 52
S G PPGPP P G G G G PPGPPG G RG G G G PG
Sbjct: 906 SGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGP 965
Query: 53 GSAGGPSQPPGGGGP-GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQ 111
G GP P G GP G R + + G + A G G+
Sbjct: 966 GGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGA---KGDPGPQGISGKDGP 1022
Query: 112 LEDGDQPESKKL--ASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLI--IGRGGEQ- 166
P + L A + GP PP E R G G I GR G Q
Sbjct: 1023 AGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGE-RGSAGTAGPIGLPGRPGPQG 1081
Query: 167 INKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDN 226
+ G + P + G P A +D +G G PGQ
Sbjct: 1082 PPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGED-GDKGEIGEPGQKGSK 1140
Query: 227 ANGGQNGT--VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPL 283
+ G+NG + P G G+ G G + Q G K +G++ P+
Sbjct: 1141 GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG---DEGARGFPGPPGPI 1197
Query: 284 RIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSVGVV--IGR 340
+ G P + E D+ G G R G G D P P SVG V +G
Sbjct: 1198 GLQGLPGPPGEKGEN-GDVGPMGPPGPPGPRGPQGP---NGADGPQGPPGSVGSVGGVGE 1253
Query: 341 SGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPP-DRCEHAARIINDLLQSLRSGPPG 399
GE +AG GP A + GP +R E +GPPG
Sbjct: 1254 KGE-----PGEAG---------NPGPPGEAGVGGPKGERGEKG-----------EAGPPG 1288
Query: 400 PPGGPGM--PPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGENVKAINQQTG 455
G PG PPG G G G PG G P + G+ +G + G
Sbjct: 1289 AAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPG 1348
Query: 456 AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPM 515
S + P G P RG P + E+ +G GP PG GP GP
Sbjct: 1349 P----SGEAGPPGPPG-----KRGPPGAAGAEGRQGEKGAKGEAGAEGP-PGKTGPVGPQ 1398
Query: 516 GPF-NPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNA 574
GP PGP +G G P GP Q P G Q PP P P DP +
Sbjct: 1399 GPAGKPGP--EGLRGIP----GPVGEQGLPGAAG----QDGPPGPMGPPGLPGLKGDPGS 1448
Query: 575 AWAAYYSHYYQ--QPPGP-----------------------VPGPAPAPAAPPAQGEP-P 608
+ PPG +PGPA P G P P
Sbjct: 1449 KGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGP 1508
Query: 609 QPPPTGQSDYTKAWEEYYKKIGQQPQQPGAP 639
Q P + A ++ + P PG P
Sbjct: 1509 QGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP 1539
Score = 70.5 bits (171), Expect = 5e-12
Identities = 96/337 (28%), Positives = 116/337 (34%), Gaps = 67/337 (19%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP GP G PG PG +G +G GPPG P G+ GG+
Sbjct: 1114 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPP-GLQGPVGAPGIA---GGDGE 1169
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIE-GPLCPVGPGP 506
Q G F + GD + F P + EK E G + P+GP P
Sbjct: 1170 PGPRGQQGMFGQ-------KGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGP-P 1221
Query: 507 GGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPA--PHDPSK 564
G PGP GP GP N QGPPG+ GG P + GN P + P
Sbjct: 1222 GPPGPRGPQGP-NGADGPQGPPGSVGSVGGVGEKGEPGEA-GNPGPPGEAGVGGPKGERG 1279
Query: 565 AAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAAPPAQGEPPQPPPTGQSDYT 619
A P AA + PPG PGP P P G P +P P GQ
Sbjct: 1280 EKGEAGPPGAAGPPGA----KGPPGDDGPKGNPGPVGFPGDP---GPPGEPGPAGQDGVG 1332
Query: 620 KAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWA 679
E P QPG P GP PPG + AA A
Sbjct: 1333 GDKGE-----DGDPGQPGPPGPSGEA-----------------GPPGPPGKRGPPGAAGA 1370
Query: 680 EYYRQQAAYYGQT--------PGPGGPQPPPTQQGQQ 708
E + + G+ GP GPQ P + G +
Sbjct: 1371 EGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPE 1407
Score = 60.1 bits (144), Expect = 7e-09
Identities = 90/355 (25%), Positives = 122/355 (34%), Gaps = 70/355 (19%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP G PG G+P PG G+ +G GPPG + P + G+ +G + V
Sbjct: 715 GPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPR-GV---KGADGV 770
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGP 506
+ + G E +G P FK + ++G ++ E+ EGP GP
Sbjct: 771 RGLKGSKGEKGE-------DGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGP-T 822
Query: 507 GGPGPAGPMG-------PFNPG-PFNQGPPGAPPHAGGP----------------PPHQY 542
G PGP+G G P PG P QGP G+ G P P Q
Sbjct: 823 GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQR 882
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV--PGPAPAPAA 600
P G + P P + P Q P GPV PGP P
Sbjct: 883 GPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPG----ERGPQGPQGPVGFPGPKGPPGP 938
Query: 601 PPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVAT 660
P G P P G++ + Q PP + + +
Sbjct: 939 PGKDGLPGHPGQRGETGF---------------QGKTGPPGPGGVVGPQGPTGETGPIGE 983
Query: 661 GG--GPGAPPGSQPDYSAAWAEYYRQQAAYYGQT--PGPGGPQPPPTQQGQQQAQ 711
G GP PPG Q AA E + G + GP G + P ++G AQ
Sbjct: 984 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQ 1038
Score = 56.6 bits (135), Expect = 8e-08
Identities = 68/235 (28%), Positives = 85/235 (36%), Gaps = 62/235 (26%)
Query: 495 IEGPLCPVGPGP--GGPGPAGPMGPFNPG-PFNQGPPGAPPHAG-----GPP------PH 540
+EGP P GP G PG GP GP PG P ++GPPG P G GPP P
Sbjct: 440 VEGPPGPAGPAGIMGPPGLQGPTGP--PGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPF 497
Query: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPA 595
+Y G P ++ A A A A A + PPGP+ PGP
Sbjct: 498 RYGGDG---------SKGPTISAQEAQAQAILQQARIAL-----RGPPGPMGLTGRPGPV 543
Query: 596 PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQ 655
P + A+GE P P G Q P P P K+
Sbjct: 544 GGPGSSGAKGESGDPGPQGPRGV------------QGPPGPTGKP------------GKR 579
Query: 656 AQVATGGGPGAP--PGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
+ GG G P PG++ D + G+ GP GP PP G +
Sbjct: 580 GRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGER-GPQGPPGPPGDDGMR 633
Score = 50.4 bits (119), Expect = 6e-06
Identities = 87/325 (26%), Positives = 110/325 (33%), Gaps = 55/325 (16%)
Query: 393 LRSGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGG-ENVKA 449
L GPPGP G G+ PPG QG GPPG P GR G
Sbjct: 439 LVEGPPGPAGPAGIMGPPGL------QGPTGPPGDPGDRGPP--------GRPGLPGADG 484
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVG----PG 505
+ G + + + +G K I Q Q + GP P+G PG
Sbjct: 485 LPGPPGTMLMLPFRYGGDGS---KGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPG 541
Query: 506 P-GGPGPAGPMGPF-NPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPS 563
P GGPG +G G +PGP QGP G GPP P G P +P
Sbjct: 542 PVGGPGSSGAKGESGDPGP--QGPRGVQ----GPPGPTGKPGKRGRPGADGGRGMPGEPG 595
Query: 564 KAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWE 623
D H ++ P PGP P +GE + P G E
Sbjct: 596 AKGDRGFDGLPGLPGDKGHRGERGPQGPPGP---PGDDGMRGEDGEIGPRGLPG-----E 647
Query: 624 EYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYR 683
+ + PGAP Q + + + G PG PPG Q +
Sbjct: 648 AGPRGLLGPRGTPGAPGQPGMAGV-DGPPGPKGNMGPQGEPG-PPGQQGNPGPQ------ 699
Query: 684 QQAAYYGQTPGPGGPQPPPTQQGQQ 708
PGP GP PP ++G Q
Sbjct: 700 -------GLPGPQGPIGPPGEKGPQ 717
Score = 43.5 bits (101), Expect = 7e-04
Identities = 27/61 (44%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQPPGGGGP 67
G P G GG G AG PPGPPG G G G GP G G +G P P G P
Sbjct: 1480 GSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP 1539
Query: 68 G 68
G
Sbjct: 1540 G 1540
Score = 41.2 bits (95), Expect = 0.003
Identities = 31/78 (39%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 3 DYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGA-------GDRGGGGPGG--GGPGGG 53
D G P P PP G G AG G GPPGA G++G G G G PG
Sbjct: 1334 DKGEDGDPGQPGPP-GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKT 1392
Query: 54 SAGGPSQPPGGGGP-GIR 70
GP P G GP G+R
Sbjct: 1393 GPVGPQGPAGKPGPEGLR 1410
Score = 39.7 bits (91), Expect = 0.010
Identities = 53/169 (31%), Positives = 65/169 (38%), Gaps = 37/169 (21%)
Query: 8 GPPPGPPPPA--GGGGGAGGAGGGPPPGPPG-AGDRG----GGGPGGGGPGG-----GSA 55
GP P PP G G G G P GPPG G +G G PG GP G G +
Sbjct: 682 GPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQS 741
Query: 56 G-----GPSQPPGG-GGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQK 109
G GP P G G PG R AD V+ + + G D GF G K
Sbjct: 742 GEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGED------------GFPGFK 789
Query: 110 RQLE-DGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVG 157
+ GD+ E ++ +G+ GP P R T + P G G
Sbjct: 790 GDMGLKGDRGEVGQIGPRGED-----GPEGPKGRAGPTGD-PGPSGQAG 832
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRG-GGGPGGGGPGG 52
PPGPP G G G G P G GD G G PG GP G
Sbjct: 1499 PPGPPGLPGPQGPKGNKGSTGPAGQ--KGDSGLPGPPGSPGPPG 1540
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 84.3 bits (207), Expect = 3e-16
Identities = 151/563 (26%), Positives = 189/563 (33%), Gaps = 83/563 (14%)
Query: 5 STGGP-------PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGS 54
+ GGP P GPP PAG G G AG G P GPPG G +G G G G PG
Sbjct: 909 TAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKG 968
Query: 55 AGGPSQPPGGGGP-GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLE 113
GP+ G GP G+ A V ++G + + G G +
Sbjct: 969 PIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIG 1028
Query: 114 DGDQPESKKLASQGDSISSQLGPI--HPPPRTSMTEEYRVPDGMVGL--IIGRGGEQINK 169
QP A+ D GP T + P G +GL + G GE+
Sbjct: 1029 PVGQPG----AAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEK--- 1081
Query: 170 IQQDSGCKVQISPDSGGLPERSVSLTGA--PESVQKAKMMLDDIVSRGRGGPPGQFHDNA 227
++G + P P GA P+ G GPPG+ +
Sbjct: 1082 --GETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGV---------GNLGPPGEKGEPG 1130
Query: 228 NGGQNGTVQE--IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRI 285
G G E + P G+ G KG G K DG + P+
Sbjct: 1131 ESGSPGIQGEPGVKGPRGERG---EKGESGQPGEPGPPGPKGPTGDDGPKGN--PGPVGF 1185
Query: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 345
GDP + D G GDR E G G P + +G+ G
Sbjct: 1186 PGDPGPPGEGGPRGQD-------GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP-- 1236
Query: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 405
AG + G G + +G P + + +G PGP G G
Sbjct: 1237 ------AGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVG-------PAGPAGKPGPDGLRG 1283
Query: 406 MPP--GGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQ 463
+P G +GR G GPPG P GL RG K G I
Sbjct: 1284 LPGSVGQQGRPGATGQAGPPG-------PVGPPGLPGLRGDAGAKGEKGHPGLIGLIG-- 1334
Query: 464 LPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG--PGGPGPAGPMGPFNPG 521
P G+ K RG P Q E I G P+GPG PG PGPAGP G G
Sbjct: 1335 --PPGEQGEKGD--RGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGA--KG 1388
Query: 522 PFNQGPPGAPPHAGGPPPHQYPP 544
G P GPP H PP
Sbjct: 1389 ATGPGGPKGEKGVQGPPGHPGPP 1411
Score = 81.6 bits (200), Expect = 2e-15
Identities = 170/639 (26%), Positives = 213/639 (33%), Gaps = 136/639 (21%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGG--GGPGGGSAGGPSQPPGGGG--- 66
GP G G G +GG P GPPG +RG GP G G PG GP PPG G
Sbjct: 764 GPRGATGKSGAKGTSGGDGPHGPPG--ERGLPGPQGPNGFPG---PKGPPGPPGKDGLPG 818
Query: 67 -PGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQL-EDGDQPESKKLA 124
PG R + +G A + G G E G + K
Sbjct: 819 HPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEG 878
Query: 125 SQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS 184
++GD GP P + P G GL GG + + SG P
Sbjct: 879 TKGDP-----GPPGAPGKDGPAGLRGFP-GERGLPGTAGGPGLKGNEGPSG-----PPGP 927
Query: 185 GGLP-ERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAG 243
G P ER + +G P + G GPPG + G+ G + P G
Sbjct: 928 AGSPGERGAAGSGGP---------IGPPGRPGPQGPPGAAGEKGVPGEKGPIG----PTG 974
Query: 244 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 303
+ G V G G L AG + +DG + +GDP
Sbjct: 975 RDG-VQGPVG-----LPGPAGPPGVAGEDGDKGE--------VGDP-------------- 1006
Query: 304 RERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDG 363
+G G++ E+G G PV + G G + Q G K D+G
Sbjct: 1007 --GQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPG--ARGPQGHFGA----KGDEG 1058
Query: 364 T-------GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRG 416
T GP + + GP + GP GPPG PG P G G
Sbjct: 1059 TRGFNGPPGPIGLQGLPGPSGEKGETGDV----------GPMGPPGPPG-PRGPAGPNGA 1107
Query: 417 QGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFI 476
G GPPGG P K G GE+ Q G+P K
Sbjct: 1108 DGPQGPPGGVGNLGPPGEK-----GEPGESGSPGIQ---------------GEPGVK--G 1145
Query: 477 IRGSPQQIDHAKQLIEEKIEGPLCPVG-PGP-GGPGPAGPMGPFNPGPFNQGPP------ 528
RG + + Q E GP P G GP G PGP G P +PGP +G P
Sbjct: 1146 PRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVG--FPGDPGPPGEGGPRGQDGA 1203
Query: 529 -------GAPPHAGGPPP--HQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAY 579
G P G P P PP G P P A DP A A
Sbjct: 1204 KGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGS-PGSEGRQGGKGAKGDPGAIGAPG 1262
Query: 580 YSHYYQQPPGPV--PGPAPAPAAPPAQGEPPQPPPTGQS 616
+ P GP PGP P + G+ +P TGQ+
Sbjct: 1263 KTGPV-GPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQA 1300
Score = 68.6 bits (166), Expect = 2e-11
Identities = 199/748 (26%), Positives = 250/748 (33%), Gaps = 158/748 (21%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG------ 63
PPGP PAG G G G PGP GD G GP G GS G P PPG
Sbjct: 314 PPGPEGPAGLIGPPGIQGN---PGP--VGDPGERGPPGRAGLPGSDGAPG-PPGTSLMLP 367
Query: 64 ---GGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPES 120
G G G + A +A+ I + A + G+ G+ L QP S
Sbjct: 368 FRFGSGGGDKGPVVAAQEAQAQAILQQ----ARLALRGPPGPMGYTGRPGPL---GQPGS 420
Query: 121 KKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQI 180
L + S LGP P +T P G G G + + D G K
Sbjct: 421 PGLKGE----SGDLGPQGPRGPQGLTG----PPGKAGRRGRAGADGARGMPGDPGVKGDR 472
Query: 181 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 240
D GLP G P K D ++G GPPG+ + + G+ G + +
Sbjct: 473 GFD--GLP-------GLPGE----KGHRGDTGAQGLPGPPGEDGERGDDGEIGP-RGLPG 518
Query: 241 PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM 300
+G GL+ KG I G + DG Q P +G
Sbjct: 519 ESGPRGLLGPKGPPGIP------GPPGVRGMDGPQG-----PKGSLGP------------ 555
Query: 301 DILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
QG G + G+ G +P P+ + IG GE K Q G+
Sbjct: 556 -------QGEPGPPGQQGTP--GTQGLPGPQGA----IGPHGE--KGPQGKPGLPGMPGS 600
Query: 361 DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW 420
D GP GPP + SGP GP G PG P G +G +G
Sbjct: 601 D---GPPGHPGKEGPPGTKGNQGP----------SGPQGPLGYPG-PRGVKGVDGIRGLK 646
Query: 421 GPPGGEMTFSIPTHK--CGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIR 478
G G + P K G+ RG V + G R P GDP
Sbjct: 647 GHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR-TGPTGDP-------- 697
Query: 479 GSPQQIDHAKQLIEEKI------EGPLCPVG----PGPGG----------PGPAGPMGPF 518
G P + +L + +GP +G PG G GP G GP
Sbjct: 698 GPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPT 757
Query: 519 NP----GPFN-QGPPGAPPHAGGPPPHQYP-------PQGWGNTYPQWQPPAPHDPSKAA 566
P GP G GA +GG PH P PQG N +P P P P
Sbjct: 758 GPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQG-PNGFP--GPKGPPGPPGKD 814
Query: 567 AAAADPNAAWAAYYSHYYQQPPGP--VPGPAPAPAAPPAQGEPPQP----PPTGQSDYTK 620
P + PPGP V GP A GE P PP Q
Sbjct: 815 GLPGHPGQRGEVGFQG-KTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGT 873
Query: 621 AWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAE 680
A +E K P PGA P +D + ++ T GGPG P A
Sbjct: 874 AGKEGTK---GDPGPPGA-PGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAG 929
Query: 681 YYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
++ A G GGP PP + G Q
Sbjct: 930 SPGERGA-----AGSGGPIGPPGRPGPQ 952
Score = 60.8 bits (146), Expect = 4e-09
Identities = 207/824 (25%), Positives = 255/824 (30%), Gaps = 242/824 (29%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGG-------GPP-----------PGPPGA-GDRGGGGPG 46
GPP PGPP G G G G GPP PGP GA G G GP
Sbjct: 530 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 47 G--GGPG-GGSAGGPSQPPGGGGPGIRKDAFADAVQ------RARQIAAKIGGDAATTVN 97
G G PG GS G P P G PG + + Q R + G
Sbjct: 590 GKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHK 649
Query: 98 NSTPDFGFGGQKRQL-EDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMV 156
+ GF G K + GD+ E S+G+ GP P RT T + G
Sbjct: 650 GEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGED-----GPEGPKGRTGPTGD----PGPP 700
Query: 157 GLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAP-ESVQKAKMMLDDIVSRG 215
GL+ +G + + G + P+ S+ G P S +K L G
Sbjct: 701 GLMGEKGKLGVPGLPGYPGRQG---------PKGSLGFPGFPGASGEKGARGLS-----G 746
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
+ GP G+ GQ G GK+G GG+ G+ G Q
Sbjct: 747 KSGPRGERGPTGPRGQRGP----RGATGKSGAKGTSGGDGPHGPPGERGL------PGPQ 796
Query: 276 NTN-VDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSV 334
N P G P K + G G R E G + G P P V
Sbjct: 797 GPNGFPGPKGPPGPPGK-------------DGLPGHPGQRGEVGFQ--GKTGPPGPPGVV 841
Query: 335 GVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLR 394
G G +GE TGP GPP + +
Sbjct: 842 GPQ-GAAGE--------------------TGPMGERGHPGPPGPPGEQGLPGTAGKEGTK 880
Query: 395 SGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQ 452
P GPPG PG P G RG +G G GG GL +G E
Sbjct: 881 GDP-GPPGAPGKDGPAGLRGFPGERGLPGTAGGP----------GL---KGNEG------ 920
Query: 453 QTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA 512
P+G P GSP E G P+GP PG PGP
Sbjct: 921 -------------PSGPPG-----PAGSPG---------ERGAAGSGGPIGP-PGRPGPQ 952
Query: 513 GPMG-------PFNPGPFN-------QGPPGAPPHAGGP-------------PPHQYPPQ 545
GP G P GP QGP G P AG P P Q +
Sbjct: 953 GPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTK 1012
Query: 546 GWGNTYPQWQPPAPHDP-SKAAAAAADPNAAWAAYYSHY----------YQQPPGPV--- 591
G + PP P P + AA AD H+ + PPGP+
Sbjct: 1013 GNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQ 1072
Query: 592 --PGPA--------------PAPAAP-----PAQGEPPQPPPTGQSDYTKAWEE------ 624
PGP+ P P P P + PQ PP G + E+
Sbjct: 1073 GLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGES 1132
Query: 625 ------------------YYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGA 666
K QP +PG PP + V G PG
Sbjct: 1133 GSPGIQGEPGVKGPRGERGEKGESGQPGEPG-PPGPKGPTGDDGPKGNPGPVGFPGDPG- 1190
Query: 667 PPGSQPDYSAAWAEYYRQQAAYYGQ--TPGPGGPQPPPTQQGQQ 708
PPG A+ R + GQ +PGP G PP G++
Sbjct: 1191 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKR 1234
Score = 46.2 bits (108), Expect = 1e-04
Identities = 27/67 (40%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 3 DYSTGGPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
D G P PG P P G G G G P G PG+ R GG G PG A G +
Sbjct: 1206 DRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTG 1265
Query: 61 PPGGGGP 67
P G GP
Sbjct: 1266 PVGPAGP 1272
Score = 45.8 bits (107), Expect = 1e-04
Identities = 80/305 (26%), Positives = 107/305 (35%), Gaps = 45/305 (14%)
Query: 10 PPGPPPPAGGGGGAGGAG--GGP-PPGPPG-AGDRGGGGPGG-----GGPGGGSAGGPSQ 60
PPGP P G G G G G P PGPPG G RG G G G PG + GP+
Sbjct: 1164 PPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTG 1223
Query: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGD--AATTVNNSTPDFGFGGQKRQLEDGDQP 118
G GP ++ RQ GD A + P G + DG +
Sbjct: 1224 ENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRG 1283
Query: 119 ESKKLASQG----DSISSQLGPIHPPPRTSM-----TEEYRVPDGMVGLIIGRGGEQINK 169
+ QG + GP+ PP + + + G++GL IG GEQ K
Sbjct: 1284 LPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGL-IGPPGEQGEK 1342
Query: 170 IQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANG 229
G + P + + + GA + G GGPPG
Sbjct: 1343 -----GDRGLPGPQGSPGQKGEMGIPGASGPI-------------GPGGPPGLPGPAGPK 1384
Query: 230 GQNGTVQEIMIPAGKAGLV-----IGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLR 284
G G P G+ G+ G GE I+ L + K DGS+ D+ +
Sbjct: 1385 GAKGATGP-GGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIP 1443
Query: 285 IIGDP 289
G P
Sbjct: 1444 TGGAP 1448
Score = 42.7 bits (99), Expect = 0.001
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 22/133 (16%)
Query: 495 IEGPLCPVGP----GP----GGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQG 546
+EGP P GP GP G PGP G G P P G PG+ G P P
Sbjct: 311 VEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGP-PGRAGLPGSDGAPGPPGTSLMLPFR 369
Query: 547 WGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAAP 601
+G+ P ++A A A + PPGP+ PGP P +P
Sbjct: 370 FGSGGGDKGPVVAAQEAQAQAILQQARLA--------LRGPPGPMGYTGRPGPLGQPGSP 421
Query: 602 PAQGEPPQPPPTG 614
+GE P G
Sbjct: 422 GLKGESGDLGPQG 434
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/85 (38%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 3 DYSTGGP--PPGPPPPAGGGGG------AGGAGGGPPPGPPGAGDRGG-----GGPGGGG 49
D GP PPGP PAG G GG G PPG G G G PG G
Sbjct: 1086 DVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKG 1145
Query: 50 PGG-----GSAGGPSQ--PPGGGGP 67
P G G +G P + PPG GP
Sbjct: 1146 PRGERGEKGESGQPGEPGPPGPKGP 1170
Score = 38.9 bits (89), Expect = 0.017
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 45/164 (27%)
Query: 393 LRSGPPGPPGGPGM--------------------PPGGRGRGRGQGNWGPPGGEMTFSIP 432
L GPPGP G G+ PPG G G GPPG +
Sbjct: 310 LVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPF- 368
Query: 433 THKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIE 492
+ G G G V A Q A ++ +R +RG P + + +
Sbjct: 369 --RFGSGGGDKGPVVAAQEAQAQAILQQAR------------LALRGPPGPMGYTGR--- 411
Query: 493 EKIEGPLCPVGPGPGGPGPAGPMGPFNP-GPFNQGPPGAPPHAG 535
GPL G PG G +G +GP P GP QG G P AG
Sbjct: 412 ---PGPLGQPG-SPGLKGESGDLGPQGPRGP--QGLTGPPGKAG 449
Score = 34.3 bits (77), Expect = 0.41
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 STGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGG--GGPGGGSAGGPSQPP 62
++G PG PP G G GA G PG P G++G GP G G PG P Q P
Sbjct: 1365 ASGPIGPGGPPGLPGPAGPKGAKGATGPGGP-KGEKGVQGPPGHPGPPGEVIQPLPIQMP 1423
Score = 30.4 bits (67), Expect = 5.9
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 396 GPPGPPG-----GPGMPPGGRGRGRGQGNWGPPG 424
GP GP G GPG P G +G G+ GPPG
Sbjct: 1379 GPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPG 1412
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 84.3 bits (207), Expect = 3e-16
Identities = 151/563 (26%), Positives = 189/563 (33%), Gaps = 83/563 (14%)
Query: 5 STGGP-------PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGS 54
+ GGP P GPP PAG G G AG G P GPPG G +G G G G PG
Sbjct: 888 TAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKG 947
Query: 55 AGGPSQPPGGGGP-GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLE 113
GP+ G GP G+ A V ++G + + G G +
Sbjct: 948 PIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIG 1007
Query: 114 DGDQPESKKLASQGDSISSQLGPI--HPPPRTSMTEEYRVPDGMVGL--IIGRGGEQINK 169
QP A+ D GP T + P G +GL + G GE+
Sbjct: 1008 PVGQPG----AAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEK--- 1060
Query: 170 IQQDSGCKVQISPDSGGLPERSVSLTGA--PESVQKAKMMLDDIVSRGRGGPPGQFHDNA 227
++G + P P GA P+ G GPPG+ +
Sbjct: 1061 --GETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGV---------GNLGPPGEKGEPG 1109
Query: 228 NGGQNGTVQE--IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRI 285
G G E + P G+ G KG G K DG + P+
Sbjct: 1110 ESGSPGIQGEPGVKGPRGERG---EKGESGQPGEPGPPGPKGPTGDDGPKGN--PGPVGF 1164
Query: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 345
GDP + D G GDR E G G P + +G+ G
Sbjct: 1165 PGDPGPPGEGGPRGQD-------GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP-- 1215
Query: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 405
AG + G G + +G P + + +G PGP G G
Sbjct: 1216 ------AGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVG-------PAGPAGKPGPDGLRG 1262
Query: 406 MPP--GGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQ 463
+P G +GR G GPPG P GL RG K G I
Sbjct: 1263 LPGSVGQQGRPGATGQAGPPG-------PVGPPGLPGLRGDAGAKGEKGHPGLIGLIG-- 1313
Query: 464 LPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG--PGGPGPAGPMGPFNPG 521
P G+ K RG P Q E I G P+GPG PG PGPAGP G G
Sbjct: 1314 --PPGEQGEKGD--RGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGA--KG 1367
Query: 522 PFNQGPPGAPPHAGGPPPHQYPP 544
G P GPP H PP
Sbjct: 1368 ATGPGGPKGEKGVQGPPGHPGPP 1390
Score = 81.6 bits (200), Expect = 2e-15
Identities = 170/639 (26%), Positives = 213/639 (33%), Gaps = 136/639 (21%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGG--GGPGGGSAGGPSQPPGGGG--- 66
GP G G G +GG P GPPG +RG GP G G PG GP PPG G
Sbjct: 743 GPRGATGKSGAKGTSGGDGPHGPPG--ERGLPGPQGPNGFPG---PKGPPGPPGKDGLPG 797
Query: 67 -PGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQL-EDGDQPESKKLA 124
PG R + +G A + G G E G + K
Sbjct: 798 HPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEG 857
Query: 125 SQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS 184
++GD GP P + P G GL GG + + SG P
Sbjct: 858 TKGDP-----GPPGAPGKDGPAGLRGFP-GERGLPGTAGGPGLKGNEGPSG-----PPGP 906
Query: 185 GGLP-ERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAG 243
G P ER + +G P + G GPPG + G+ G + P G
Sbjct: 907 AGSPGERGAAGSGGP---------IGPPGRPGPQGPPGAAGEKGVPGEKGPIG----PTG 953
Query: 244 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 303
+ G V G G L AG + +DG + +GDP
Sbjct: 954 RDG-VQGPVG-----LPGPAGPPGVAGEDGDKGE--------VGDP-------------- 985
Query: 304 RERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDG 363
+G G++ E+G G PV + G G + Q G K D+G
Sbjct: 986 --GQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPG--ARGPQGHFGA----KGDEG 1037
Query: 364 T-------GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRG 416
T GP + + GP + GP GPPG PG P G G
Sbjct: 1038 TRGFNGPPGPIGLQGLPGPSGEKGETGDV----------GPMGPPGPPG-PRGPAGPNGA 1086
Query: 417 QGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFI 476
G GPPGG P K G GE+ Q G+P K
Sbjct: 1087 DGPQGPPGGVGNLGPPGEK-----GEPGESGSPGIQ---------------GEPGVK--G 1124
Query: 477 IRGSPQQIDHAKQLIEEKIEGPLCPVG-PGP-GGPGPAGPMGPFNPGPFNQGPP------ 528
RG + + Q E GP P G GP G PGP G P +PGP +G P
Sbjct: 1125 PRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVG--FPGDPGPPGEGGPRGQDGA 1182
Query: 529 -------GAPPHAGGPPP--HQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAY 579
G P G P P PP G P P A DP A A
Sbjct: 1183 KGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGS-PGSEGRQGGKGAKGDPGAIGAPG 1241
Query: 580 YSHYYQQPPGPV--PGPAPAPAAPPAQGEPPQPPPTGQS 616
+ P GP PGP P + G+ +P TGQ+
Sbjct: 1242 KTGPV-GPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQA 1279
Score = 68.6 bits (166), Expect = 2e-11
Identities = 199/748 (26%), Positives = 250/748 (33%), Gaps = 158/748 (21%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG------ 63
PPGP PAG G G G PGP GD G GP G GS G P PPG
Sbjct: 293 PPGPEGPAGLIGPPGIQGN---PGP--VGDPGERGPPGRAGLPGSDGAPG-PPGTSLMLP 346
Query: 64 ---GGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPES 120
G G G + A +A+ I + A + G+ G+ L QP S
Sbjct: 347 FRFGSGGGDKGPVVAAQEAQAQAILQQ----ARLALRGPPGPMGYTGRPGPL---GQPGS 399
Query: 121 KKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQI 180
L + S LGP P +T P G G G + + D G K
Sbjct: 400 PGLKGE----SGDLGPQGPRGPQGLTG----PPGKAGRRGRAGADGARGMPGDPGVKGDR 451
Query: 181 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 240
D GLP G P K D ++G GPPG+ + + G+ G + +
Sbjct: 452 GFD--GLP-------GLPGE----KGHRGDTGAQGLPGPPGEDGERGDDGEIGP-RGLPG 497
Query: 241 PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM 300
+G GL+ KG I G + DG Q P +G
Sbjct: 498 ESGPRGLLGPKGPPGIP------GPPGVRGMDGPQG-----PKGSLGP------------ 534
Query: 301 DILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
QG G + G+ G +P P+ + IG GE K Q G+
Sbjct: 535 -------QGEPGPPGQQGTP--GTQGLPGPQGA----IGPHGE--KGPQGKPGLPGMPGS 579
Query: 361 DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW 420
D GP GPP + SGP GP G PG P G +G +G
Sbjct: 580 D---GPPGHPGKEGPPGTKGNQGP----------SGPQGPLGYPG-PRGVKGVDGIRGLK 625
Query: 421 GPPGGEMTFSIPTHK--CGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIR 478
G G + P K G+ RG V + G R P GDP
Sbjct: 626 GHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR-TGPTGDP-------- 676
Query: 479 GSPQQIDHAKQLIEEKI------EGPLCPVG----PGPGG----------PGPAGPMGPF 518
G P + +L + +GP +G PG G GP G GP
Sbjct: 677 GPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPT 736
Query: 519 NP----GPFN-QGPPGAPPHAGGPPPHQYP-------PQGWGNTYPQWQPPAPHDPSKAA 566
P GP G GA +GG PH P PQG N +P P P P
Sbjct: 737 GPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQG-PNGFP--GPKGPPGPPGKD 793
Query: 567 AAAADPNAAWAAYYSHYYQQPPGP--VPGPAPAPAAPPAQGEPPQP----PPTGQSDYTK 620
P + PPGP V GP A GE P PP Q
Sbjct: 794 GLPGHPGQRGEVGFQG-KTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGT 852
Query: 621 AWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAE 680
A +E K P PGA P +D + ++ T GGPG P A
Sbjct: 853 AGKEGTK---GDPGPPGA-PGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAG 908
Query: 681 YYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
++ A G GGP PP + G Q
Sbjct: 909 SPGERGA-----AGSGGPIGPPGRPGPQ 931
Score = 60.8 bits (146), Expect = 4e-09
Identities = 207/824 (25%), Positives = 255/824 (30%), Gaps = 242/824 (29%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGG-------GPP-----------PGPPGA-GDRGGGGPG 46
GPP PGPP G G G G GPP PGP GA G G GP
Sbjct: 509 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 568
Query: 47 G--GGPG-GGSAGGPSQPPGGGGPGIRKDAFADAVQ------RARQIAAKIGGDAATTVN 97
G G PG GS G P P G PG + + Q R + G
Sbjct: 569 GKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHK 628
Query: 98 NSTPDFGFGGQKRQL-EDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMV 156
+ GF G K + GD+ E S+G+ GP P RT T + G
Sbjct: 629 GEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGED-----GPEGPKGRTGPTGD----PGPP 679
Query: 157 GLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAP-ESVQKAKMMLDDIVSRG 215
GL+ +G + + G + P+ S+ G P S +K L G
Sbjct: 680 GLMGEKGKLGVPGLPGYPGRQG---------PKGSLGFPGFPGASGEKGARGLS-----G 725
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
+ GP G+ GQ G GK+G GG+ G+ G Q
Sbjct: 726 KSGPRGERGPTGPRGQRGP----RGATGKSGAKGTSGGDGPHGPPGERGL------PGPQ 775
Query: 276 NTN-VDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSV 334
N P G P K + G G R E G + G P P V
Sbjct: 776 GPNGFPGPKGPPGPPGK-------------DGLPGHPGQRGEVGFQ--GKTGPPGPPGVV 820
Query: 335 GVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLR 394
G G +GE TGP GPP + +
Sbjct: 821 GPQ-GAAGE--------------------TGPMGERGHPGPPGPPGEQGLPGTAGKEGTK 859
Query: 395 SGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQ 452
P GPPG PG P G RG +G G GG GL +G E
Sbjct: 860 GDP-GPPGAPGKDGPAGLRGFPGERGLPGTAGGP----------GL---KGNEG------ 899
Query: 453 QTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA 512
P+G P GSP E G P+GP PG PGP
Sbjct: 900 -------------PSGPPG-----PAGSPG---------ERGAAGSGGPIGP-PGRPGPQ 931
Query: 513 GPMG-------PFNPGPFN-------QGPPGAPPHAGGP-------------PPHQYPPQ 545
GP G P GP QGP G P AG P P Q +
Sbjct: 932 GPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTK 991
Query: 546 GWGNTYPQWQPPAPHDP-SKAAAAAADPNAAWAAYYSHY----------YQQPPGPV--- 591
G + PP P P + AA AD H+ + PPGP+
Sbjct: 992 GNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQ 1051
Query: 592 --PGPA--------------PAPAAP-----PAQGEPPQPPPTGQSDYTKAWEE------ 624
PGP+ P P P P + PQ PP G + E+
Sbjct: 1052 GLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGES 1111
Query: 625 ------------------YYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGA 666
K QP +PG PP + V G PG
Sbjct: 1112 GSPGIQGEPGVKGPRGERGEKGESGQPGEPG-PPGPKGPTGDDGPKGNPGPVGFPGDPG- 1169
Query: 667 PPGSQPDYSAAWAEYYRQQAAYYGQ--TPGPGGPQPPPTQQGQQ 708
PPG A+ R + GQ +PGP G PP G++
Sbjct: 1170 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKR 1213
Score = 46.2 bits (108), Expect = 1e-04
Identities = 27/67 (40%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 3 DYSTGGPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
D G P PG P P G G G G P G PG+ R GG G PG A G +
Sbjct: 1185 DRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTG 1244
Query: 61 PPGGGGP 67
P G GP
Sbjct: 1245 PVGPAGP 1251
Score = 45.8 bits (107), Expect = 1e-04
Identities = 80/305 (26%), Positives = 107/305 (35%), Gaps = 45/305 (14%)
Query: 10 PPGPPPPAGGGGGAGGAG--GGP-PPGPPG-AGDRGGGGPGG-----GGPGGGSAGGPSQ 60
PPGP P G G G G G P PGPPG G RG G G G PG + GP+
Sbjct: 1143 PPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTG 1202
Query: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGD--AATTVNNSTPDFGFGGQKRQLEDGDQP 118
G GP ++ RQ GD A + P G + DG +
Sbjct: 1203 ENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRG 1262
Query: 119 ESKKLASQG----DSISSQLGPIHPPPRTSM-----TEEYRVPDGMVGLIIGRGGEQINK 169
+ QG + GP+ PP + + + G++GL IG GEQ K
Sbjct: 1263 LPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGL-IGPPGEQGEK 1321
Query: 170 IQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANG 229
G + P + + + GA + G GGPPG
Sbjct: 1322 -----GDRGLPGPQGSPGQKGEMGIPGASGPI-------------GPGGPPGLPGPAGPK 1363
Query: 230 GQNGTVQEIMIPAGKAGLV-----IGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLR 284
G G P G+ G+ G GE I+ L + K DGS+ D+ +
Sbjct: 1364 GAKGATGP-GGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIP 1422
Query: 285 IIGDP 289
G P
Sbjct: 1423 TGGAP 1427
Score = 42.7 bits (99), Expect = 0.001
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 22/133 (16%)
Query: 495 IEGPLCPVGP----GP----GGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQG 546
+EGP P GP GP G PGP G G P P G PG+ G P P
Sbjct: 290 VEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGP-PGRAGLPGSDGAPGPPGTSLMLPFR 348
Query: 547 WGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAAP 601
+G+ P ++A A A + PPGP+ PGP P +P
Sbjct: 349 FGSGGGDKGPVVAAQEAQAQAILQQARLA--------LRGPPGPMGYTGRPGPLGQPGSP 400
Query: 602 PAQGEPPQPPPTG 614
+GE P G
Sbjct: 401 GLKGESGDLGPQG 413
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/85 (38%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 3 DYSTGGP--PPGPPPPAGGGGG------AGGAGGGPPPGPPGAGDRGG-----GGPGGGG 49
D GP PPGP PAG G GG G PPG G G G PG G
Sbjct: 1065 DVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKG 1124
Query: 50 PGG-----GSAGGPSQ--PPGGGGP 67
P G G +G P + PPG GP
Sbjct: 1125 PRGERGEKGESGQPGEPGPPGPKGP 1149
Score = 38.9 bits (89), Expect = 0.017
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 45/164 (27%)
Query: 393 LRSGPPGPPGGPGM--------------------PPGGRGRGRGQGNWGPPGGEMTFSIP 432
L GPPGP G G+ PPG G G GPPG +
Sbjct: 289 LVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPF- 347
Query: 433 THKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIE 492
+ G G G V A Q A ++ +R +RG P + + +
Sbjct: 348 --RFGSGGGDKGPVVAAQEAQAQAILQQAR------------LALRGPPGPMGYTGR--- 390
Query: 493 EKIEGPLCPVGPGPGGPGPAGPMGPFNP-GPFNQGPPGAPPHAG 535
GPL G PG G +G +GP P GP QG G P AG
Sbjct: 391 ---PGPLGQPG-SPGLKGESGDLGPQGPRGP--QGLTGPPGKAG 428
Score = 34.3 bits (77), Expect = 0.41
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 STGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGG--GGPGGGSAGGPSQPP 62
++G PG PP G G GA G PG P G++G GP G G PG P Q P
Sbjct: 1344 ASGPIGPGGPPGLPGPAGPKGAKGATGPGGP-KGEKGVQGPPGHPGPPGEVIQPLPIQMP 1402
Score = 30.4 bits (67), Expect = 5.9
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 396 GPPGPPG-----GPGMPPGGRGRGRGQGNWGPPG 424
GP GP G GPG P G +G G+ GPPG
Sbjct: 1358 GPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPG 1391
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 84.3 bits (207), Expect = 3e-16
Identities = 151/563 (26%), Positives = 189/563 (33%), Gaps = 83/563 (14%)
Query: 5 STGGP-------PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGS 54
+ GGP P GPP PAG G G AG G P GPPG G +G G G G PG
Sbjct: 995 TAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKG 1054
Query: 55 AGGPSQPPGGGGP-GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLE 113
GP+ G GP G+ A V ++G + + G G +
Sbjct: 1055 PIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIG 1114
Query: 114 DGDQPESKKLASQGDSISSQLGPI--HPPPRTSMTEEYRVPDGMVGL--IIGRGGEQINK 169
QP A+ D GP T + P G +GL + G GE+
Sbjct: 1115 PVGQPG----AAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEK--- 1167
Query: 170 IQQDSGCKVQISPDSGGLPERSVSLTGA--PESVQKAKMMLDDIVSRGRGGPPGQFHDNA 227
++G + P P GA P+ G GPPG+ +
Sbjct: 1168 --GETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGV---------GNLGPPGEKGEPG 1216
Query: 228 NGGQNGTVQE--IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRI 285
G G E + P G+ G KG G K DG + P+
Sbjct: 1217 ESGSPGIQGEPGVKGPRGERG---EKGESGQPGEPGPPGPKGPTGDDGPKGN--PGPVGF 1271
Query: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 345
GDP + D G GDR E G G P + +G+ G
Sbjct: 1272 PGDPGPPGEGGPRGQD-------GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP-- 1322
Query: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPG 405
AG + G G + +G P + + +G PGP G G
Sbjct: 1323 ------AGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVG-------PAGPAGKPGPDGLRG 1369
Query: 406 MPP--GGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQ 463
+P G +GR G GPPG P GL RG K G I
Sbjct: 1370 LPGSVGQQGRPGATGQAGPPG-------PVGPPGLPGLRGDAGAKGEKGHPGLIGLIG-- 1420
Query: 464 LPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG--PGGPGPAGPMGPFNPG 521
P G+ K RG P Q E I G P+GPG PG PGPAGP G G
Sbjct: 1421 --PPGEQGEKGD--RGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGA--KG 1474
Query: 522 PFNQGPPGAPPHAGGPPPHQYPP 544
G P GPP H PP
Sbjct: 1475 ATGPGGPKGEKGVQGPPGHPGPP 1497
Score = 81.6 bits (200), Expect = 2e-15
Identities = 170/639 (26%), Positives = 213/639 (33%), Gaps = 136/639 (21%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGG--GGPGGGSAGGPSQPPGGGG--- 66
GP G G G +GG P GPPG +RG GP G G PG GP PPG G
Sbjct: 850 GPRGATGKSGAKGTSGGDGPHGPPG--ERGLPGPQGPNGFPG---PKGPPGPPGKDGLPG 904
Query: 67 -PGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQL-EDGDQPESKKLA 124
PG R + +G A + G G E G + K
Sbjct: 905 HPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEG 964
Query: 125 SQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS 184
++GD GP P + P G GL GG + + SG P
Sbjct: 965 TKGDP-----GPPGAPGKDGPAGLRGFP-GERGLPGTAGGPGLKGNEGPSG-----PPGP 1013
Query: 185 GGLP-ERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAG 243
G P ER + +G P + G GPPG + G+ G + P G
Sbjct: 1014 AGSPGERGAAGSGGP---------IGPPGRPGPQGPPGAAGEKGVPGEKGPIG----PTG 1060
Query: 244 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 303
+ G V G G L AG + +DG + +GDP
Sbjct: 1061 RDG-VQGPVG-----LPGPAGPPGVAGEDGDKGE--------VGDP-------------- 1092
Query: 304 RERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDG 363
+G G++ E+G G PV + G G + Q G K D+G
Sbjct: 1093 --GQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPG--ARGPQGHFGA----KGDEG 1144
Query: 364 T-------GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRG 416
T GP + + GP + GP GPPG PG P G G
Sbjct: 1145 TRGFNGPPGPIGLQGLPGPSGEKGETGDV----------GPMGPPGPPG-PRGPAGPNGA 1193
Query: 417 QGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFI 476
G GPPGG P K G GE+ Q G+P K
Sbjct: 1194 DGPQGPPGGVGNLGPPGEK-----GEPGESGSPGIQ---------------GEPGVK--G 1231
Query: 477 IRGSPQQIDHAKQLIEEKIEGPLCPVG-PGP-GGPGPAGPMGPFNPGPFNQGPP------ 528
RG + + Q E GP P G GP G PGP G P +PGP +G P
Sbjct: 1232 PRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVG--FPGDPGPPGEGGPRGQDGA 1289
Query: 529 -------GAPPHAGGPPP--HQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAY 579
G P G P P PP G P P A DP A A
Sbjct: 1290 KGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGS-PGSEGRQGGKGAKGDPGAIGAPG 1348
Query: 580 YSHYYQQPPGPV--PGPAPAPAAPPAQGEPPQPPPTGQS 616
+ P GP PGP P + G+ +P TGQ+
Sbjct: 1349 KTGPV-GPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQA 1386
Score = 68.6 bits (166), Expect = 2e-11
Identities = 199/748 (26%), Positives = 250/748 (33%), Gaps = 158/748 (21%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG------ 63
PPGP PAG G G G PGP GD G GP G GS G P PPG
Sbjct: 400 PPGPEGPAGLIGPPGIQGN---PGP--VGDPGERGPPGRAGLPGSDGAPG-PPGTSLMLP 453
Query: 64 ---GGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPES 120
G G G + A +A+ I + A + G+ G+ L QP S
Sbjct: 454 FRFGSGGGDKGPVVAAQEAQAQAILQQ----ARLALRGPPGPMGYTGRPGPL---GQPGS 506
Query: 121 KKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQI 180
L + S LGP P +T P G G G + + D G K
Sbjct: 507 PGLKGE----SGDLGPQGPRGPQGLTG----PPGKAGRRGRAGADGARGMPGDPGVKGDR 558
Query: 181 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 240
D GLP G P K D ++G GPPG+ + + G+ G + +
Sbjct: 559 GFD--GLP-------GLPGE----KGHRGDTGAQGLPGPPGEDGERGDDGEIGP-RGLPG 604
Query: 241 PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM 300
+G GL+ KG I G + DG Q P +G
Sbjct: 605 ESGPRGLLGPKGPPGIP------GPPGVRGMDGPQG-----PKGSLGP------------ 641
Query: 301 DILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
QG G + G+ G +P P+ + IG GE K Q G+
Sbjct: 642 -------QGEPGPPGQQGTP--GTQGLPGPQGA----IGPHGE--KGPQGKPGLPGMPGS 686
Query: 361 DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNW 420
D GP GPP + SGP GP G PG P G +G +G
Sbjct: 687 D---GPPGHPGKEGPPGTKGNQGP----------SGPQGPLGYPG-PRGVKGVDGIRGLK 732
Query: 421 GPPGGEMTFSIPTHK--CGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIR 478
G G + P K G+ RG V + G R P GDP
Sbjct: 733 GHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEGPKGR-TGPTGDP-------- 783
Query: 479 GSPQQIDHAKQLIEEKI------EGPLCPVG----PGPGG----------PGPAGPMGPF 518
G P + +L + +GP +G PG G GP G GP
Sbjct: 784 GPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPT 843
Query: 519 NP----GPFN-QGPPGAPPHAGGPPPHQYP-------PQGWGNTYPQWQPPAPHDPSKAA 566
P GP G GA +GG PH P PQG N +P P P P
Sbjct: 844 GPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQG-PNGFP--GPKGPPGPPGKD 900
Query: 567 AAAADPNAAWAAYYSHYYQQPPGP--VPGPAPAPAAPPAQGEPPQP----PPTGQSDYTK 620
P + PPGP V GP A GE P PP Q
Sbjct: 901 GLPGHPGQRGEVGFQG-KTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGT 959
Query: 621 AWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAE 680
A +E K P PGA P +D + ++ T GGPG P A
Sbjct: 960 AGKEGTK---GDPGPPGA-PGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAG 1015
Query: 681 YYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
++ A G GGP PP + G Q
Sbjct: 1016 SPGERGA-----AGSGGPIGPPGRPGPQ 1038
Score = 60.8 bits (146), Expect = 4e-09
Identities = 207/824 (25%), Positives = 255/824 (30%), Gaps = 242/824 (29%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGG-------GPP-----------PGPPGA-GDRGGGGPG 46
GPP PGPP G G G G GPP PGP GA G G GP
Sbjct: 616 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 675
Query: 47 G--GGPG-GGSAGGPSQPPGGGGPGIRKDAFADAVQ------RARQIAAKIGGDAATTVN 97
G G PG GS G P P G PG + + Q R + G
Sbjct: 676 GKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHK 735
Query: 98 NSTPDFGFGGQKRQL-EDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMV 156
+ GF G K + GD+ E S+G+ GP P RT T + G
Sbjct: 736 GEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGED-----GPEGPKGRTGPTGD----PGPP 786
Query: 157 GLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAP-ESVQKAKMMLDDIVSRG 215
GL+ +G + + G + P+ S+ G P S +K L G
Sbjct: 787 GLMGEKGKLGVPGLPGYPGRQG---------PKGSLGFPGFPGASGEKGARGLS-----G 832
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
+ GP G+ GQ G GK+G GG+ G+ G Q
Sbjct: 833 KSGPRGERGPTGPRGQRGP----RGATGKSGAKGTSGGDGPHGPPGERGL------PGPQ 882
Query: 276 NTN-VDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSV 334
N P G P K + G G R E G + G P P V
Sbjct: 883 GPNGFPGPKGPPGPPGK-------------DGLPGHPGQRGEVGFQ--GKTGPPGPPGVV 927
Query: 335 GVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLR 394
G G +GE TGP GPP + +
Sbjct: 928 GPQ-GAAGE--------------------TGPMGERGHPGPPGPPGEQGLPGTAGKEGTK 966
Query: 395 SGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQ 452
P GPPG PG P G RG +G G GG GL +G E
Sbjct: 967 GDP-GPPGAPGKDGPAGLRGFPGERGLPGTAGGP----------GL---KGNEG------ 1006
Query: 453 QTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA 512
P+G P GSP E G P+GP PG PGP
Sbjct: 1007 -------------PSGPPG-----PAGSPG---------ERGAAGSGGPIGP-PGRPGPQ 1038
Query: 513 GPMG-------PFNPGPFN-------QGPPGAPPHAGGP-------------PPHQYPPQ 545
GP G P GP QGP G P AG P P Q +
Sbjct: 1039 GPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTK 1098
Query: 546 GWGNTYPQWQPPAPHDP-SKAAAAAADPNAAWAAYYSHY----------YQQPPGPV--- 591
G + PP P P + AA AD H+ + PPGP+
Sbjct: 1099 GNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQ 1158
Query: 592 --PGPA--------------PAPAAP-----PAQGEPPQPPPTGQSDYTKAWEE------ 624
PGP+ P P P P + PQ PP G + E+
Sbjct: 1159 GLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGES 1218
Query: 625 ------------------YYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGA 666
K QP +PG PP + V G PG
Sbjct: 1219 GSPGIQGEPGVKGPRGERGEKGESGQPGEPG-PPGPKGPTGDDGPKGNPGPVGFPGDPG- 1276
Query: 667 PPGSQPDYSAAWAEYYRQQAAYYGQ--TPGPGGPQPPPTQQGQQ 708
PPG A+ R + GQ +PGP G PP G++
Sbjct: 1277 PPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKR 1320
Score = 46.2 bits (108), Expect = 1e-04
Identities = 27/67 (40%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 3 DYSTGGPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
D G P PG P P G G G G P G PG+ R GG G PG A G +
Sbjct: 1292 DRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTG 1351
Query: 61 PPGGGGP 67
P G GP
Sbjct: 1352 PVGPAGP 1358
Score = 45.8 bits (107), Expect = 1e-04
Identities = 80/305 (26%), Positives = 107/305 (35%), Gaps = 45/305 (14%)
Query: 10 PPGPPPPAGGGGGAGGAG--GGP-PPGPPG-AGDRGGGGPGG-----GGPGGGSAGGPSQ 60
PPGP P G G G G G P PGPPG G RG G G G PG + GP+
Sbjct: 1250 PPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTG 1309
Query: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGD--AATTVNNSTPDFGFGGQKRQLEDGDQP 118
G GP ++ RQ GD A + P G + DG +
Sbjct: 1310 ENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRG 1369
Query: 119 ESKKLASQG----DSISSQLGPIHPPPRTSM-----TEEYRVPDGMVGLIIGRGGEQINK 169
+ QG + GP+ PP + + + G++GL IG GEQ K
Sbjct: 1370 LPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGL-IGPPGEQGEK 1428
Query: 170 IQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANG 229
G + P + + + GA + G GGPPG
Sbjct: 1429 -----GDRGLPGPQGSPGQKGEMGIPGASGPI-------------GPGGPPGLPGPAGPK 1470
Query: 230 GQNGTVQEIMIPAGKAGLV-----IGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLR 284
G G P G+ G+ G GE I+ L + K DGS+ D+ +
Sbjct: 1471 GAKGATGP-GGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIP 1529
Query: 285 IIGDP 289
G P
Sbjct: 1530 TGGAP 1534
Score = 42.7 bits (99), Expect = 0.001
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 22/133 (16%)
Query: 495 IEGPLCPVGP----GP----GGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQG 546
+EGP P GP GP G PGP G G P P G PG+ G P P
Sbjct: 397 VEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGP-PGRAGLPGSDGAPGPPGTSLMLPFR 455
Query: 547 WGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAAP 601
+G+ P ++A A A + PPGP+ PGP P +P
Sbjct: 456 FGSGGGDKGPVVAAQEAQAQAILQQARLA--------LRGPPGPMGYTGRPGPLGQPGSP 507
Query: 602 PAQGEPPQPPPTG 614
+GE P G
Sbjct: 508 GLKGESGDLGPQG 520
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/85 (38%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 3 DYSTGGP--PPGPPPPAGGGGG------AGGAGGGPPPGPPGAGDRGG-----GGPGGGG 49
D GP PPGP PAG G GG G PPG G G G PG G
Sbjct: 1172 DVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKG 1231
Query: 50 PGG-----GSAGGPSQ--PPGGGGP 67
P G G +G P + PPG GP
Sbjct: 1232 PRGERGEKGESGQPGEPGPPGPKGP 1256
Score = 38.9 bits (89), Expect = 0.017
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 45/164 (27%)
Query: 393 LRSGPPGPPGGPGM--------------------PPGGRGRGRGQGNWGPPGGEMTFSIP 432
L GPPGP G G+ PPG G G GPPG +
Sbjct: 396 LVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPF- 454
Query: 433 THKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIE 492
+ G G G V A Q A ++ +R +RG P + + +
Sbjct: 455 --RFGSGGGDKGPVVAAQEAQAQAILQQAR------------LALRGPPGPMGYTGR--- 497
Query: 493 EKIEGPLCPVGPGPGGPGPAGPMGPFNP-GPFNQGPPGAPPHAG 535
GPL G PG G +G +GP P GP QG G P AG
Sbjct: 498 ---PGPLGQPG-SPGLKGESGDLGPQGPRGP--QGLTGPPGKAG 535
Score = 34.3 bits (77), Expect = 0.41
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 5 STGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGG--GGPGGGSAGGPSQPP 62
++G PG PP G G GA G PG P G++G GP G G PG P Q P
Sbjct: 1451 ASGPIGPGGPPGLPGPAGPKGAKGATGPGGP-KGEKGVQGPPGHPGPPGEVIQPLPIQMP 1509
Score = 30.4 bits (67), Expect = 5.9
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 396 GPPGPPG-----GPGMPPGGRGRGRGQGNWGPPG 424
GP GP G GPG P G +G G+ GPPG
Sbjct: 1465 GPAGPKGAKGATGPGGPKGEKGVQGPPGHPGPPG 1498
>gi|222352151 poly(rC) binding protein 1 [Homo sapiens]
Length = 356
Score = 82.0 bits (201), Expect = 2e-15
Identities = 89/350 (25%), Positives = 149/350 (42%), Gaps = 37/350 (10%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + +I+++SG ++ IS G PER ++LTG ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS--EGNCPERIITLTGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 INS---SMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYK----VQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPR 331
N + ++ + I G P V+Q C ++++ L + QG R+ P+P
Sbjct: 140 N-STERAITIAGVPQSVTECVKQICLVMLETLSQSPQG----------RVMTIPYQPMPA 188
Query: 332 HSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIA------HIMGPPDRCEHAARI 385
S + G + + AG D GP A H + P D +
Sbjct: 189 SSPVICAGGQ----DRCSDAAG--YPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVA 242
Query: 386 INDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGE 445
++ G G G P +G E+T IP + G +IGR G
Sbjct: 243 RQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT--IPNNLIGCIIGRQGA 300
Query: 446 NVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
N+ I Q +GA ++I+ P G + I GS I A+ LI ++
Sbjct: 301 NINEIRQMSGAQIKIAN--PVEGSSG-RQVTITGSAASISLAQYLINARL 347
Score = 67.8 bits (164), Expect = 3e-11
Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +K+I+ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
+ PP + +P +CG +IG+GG +K I +
Sbjct: 83 INSSMTNSTAASRPPV----------------TLRLVVPATQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ-----LIEEKIEGPLCPVGPGPGG 508
TGA V+++ + PN + I G PQ + + ++E + P V P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQ 184
Query: 509 PGPAGPMGPFNPGPFNQGPPGAPPHA----GGPPPHQYPPQG 546
P PA G PHA GPP Y QG
Sbjct: 185 PMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 53.9 bits (128), Expect = 5e-07
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
T T E +P+ ++G IIGR G IN+I+Q SG +++I+ G R V++TG+ S+
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 337
Query: 203 KAKMMLDDIVSRGRG 217
A+ +++ +S +G
Sbjct: 338 LAQYLINARLSSEKG 352
Score = 52.8 bits (125), Expect = 1e-06
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 230 GQNGTVQEIMIPAGK-AGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGD 288
G N T+ ++ GK G +IGK GE++K+++E +G ++ + S+ ++ + + G
Sbjct: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGNCPERIITLTGP 64
Query: 289 PYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKI 348
+ +A M++D L E D + SR + + VP G +IG+ G IK+I
Sbjct: 65 TNAIFKAFAMIIDKL-EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 349 QNDAGVRIQFKQDD-GTGPEKIAHIMGPPDR-CEHAARIINDLLQSLRSGPPG------- 399
+ G ++Q D E+ I G P E +I +L++L P G
Sbjct: 124 RESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Query: 400 ---PPGGPGMPPGGRGR 413
P P + GG+ R
Sbjct: 184 QPMPASSPVICAGGQDR 200
Score = 43.1 bits (100), Expect = 9e-04
Identities = 63/287 (21%), Positives = 109/287 (37%), Gaps = 40/287 (13%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ I+S + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGK 244
P ER++++ G P+SV + + ++ P G+ T+ +PA
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSP--------QGRVMTIPYQPMPASS 190
Query: 245 AGLVIGKGGETIKQLQERAGVKMI--------LIQDGSQNTNVDKPLRIIGDPYKVQQAC 296
VI GG+ + + AG L Q + PL D K+ Q
Sbjct: 191 P--VICAGGQ--DRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPL----DLAKLNQVA 242
Query: 297 EMVMDILRERDQGGFGDRNEYGSRIGG-----------GIDVPVPRHSVGVVIGRSGEMI 345
GF + + G ++ +P + +G +IGR G I
Sbjct: 243 RQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANI 302
Query: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQS 392
+I+ +G +I+ + I G A +IN L S
Sbjct: 303 NEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSS 349
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 80.5 bits (197), Expect = 5e-15
Identities = 180/669 (26%), Positives = 221/669 (33%), Gaps = 171/669 (25%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGP---------PGA----------GDRGGGGPGG---- 47
PG P PAG G G G PPGP PGA G RG GP G
Sbjct: 313 PGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGE 372
Query: 48 -GGPGGGSAGGPSQPPGGGG-PGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGF 105
G PG A GP+ PG G PG A A IA G A + G
Sbjct: 373 PGPPGPAGAAGPAGNPGADGQPG------AKGANGAPGIAGAPGFPGARGPSGPQGPGGP 426
Query: 106 GGQKRQLEDGDQPESKKLASQGDS-ISSQLGP--IHPPPRTSMTEEYR------VPDGMV 156
G K G+ E S+GD+ + GP + PP + E R P G+
Sbjct: 427 PGPK-----GNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLP 481
Query: 157 GLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGR 216
G RGG P S G P + V K + S G
Sbjct: 482 GPPGERGG-----------------PGSRGFP--------GADGVAGPKGPAGERGSPGP 516
Query: 217 GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN 276
GP G + G+ G E +P K GL G + G QDG
Sbjct: 517 AGPKG------SPGEAGRPGEAGLPGAK-GLT---GSPGSPGPDGKTGPPGPAGQDGRPG 566
Query: 277 TNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGV 336
G P QA M +G G+ + G R VP P +VG
Sbjct: 567 PP--------GPPGARGQAGVMGF----PGPKGAAGEPGKAGER-----GVPGPPGAVGP 609
Query: 337 VIGRSGEMIKK----IQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAAR--IINDLL 390
G+ GE + AG R + G + + GPP + DL
Sbjct: 610 A-GKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDL- 667
Query: 391 QSLRSGPPGPPG--------------GPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKC 436
G PGP G GP P G RG GN G G P
Sbjct: 668 -----GAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPG--- 719
Query: 437 GLVIGRGGENVKAINQQTGAFVEISRQLP-PNGDPNFKLFIIRGSPQQIDHAKQLIEEK- 494
+G ++ + + GA LP P GD P+ D + +
Sbjct: 720 ----SQGAPGLQGMPGERGA-----AGLPGPKGDRG------DAGPKGADGSPGKDGVRG 764
Query: 495 IEGPLCPVGP--GPGGPGPAGPMGPFNP-----GPFNQGPPGAPPHAGGPPPHQYPPQGW 547
+ GP+ P GP PG G +GP GP P P ++G PG P GP PP
Sbjct: 765 LTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPP----GPAGFAGPPGAD 820
Query: 548 GNTYPQWQPPAPHDPSKAAAA--AADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQG 605
G QP A +P A A A P A A PPGP+ G AP A A+G
Sbjct: 821 G------QPGAKGEPGDAGAKGDAGPPGPAGPA-------GPPGPI-GNVGAPGAKGARG 866
Query: 606 EPPQPPPTG 614
P TG
Sbjct: 867 SAGPPGATG 875
Score = 73.2 bits (178), Expect = 8e-13
Identities = 195/753 (25%), Positives = 223/753 (29%), Gaps = 140/753 (18%)
Query: 10 PPGPPPPAGGGGGA---GGAGGGPPPGPPGA-------------------------GDRG 41
PPGPP G G A G G PPGP GA GD G
Sbjct: 222 PPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAG 281
Query: 42 GGGPGG--GGPGGGSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNS 99
GP G G PG A G P G G R A A R A G T
Sbjct: 282 PAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAG 341
Query: 100 TPDFGFGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLI 159
P F G + E G Q QG + + GP P DG G
Sbjct: 342 PPGFP-GAVGAKGEAGPQGPRGSEGPQG--VRGEPGPPGPAGAAGPAGNPGA-DGQPGAK 397
Query: 160 IGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGR--- 216
G I G + P G P +G P A D ++G
Sbjct: 398 GANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEP----GAPGSKGDTGAKGEPGP 453
Query: 217 ---GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDG 273
GPPG + G G +P G G G G AG K + G
Sbjct: 454 VGVQGPPGPAGEEGKRGARGEPGPTGLP-GPPGERGGPGSRGFPGADGVAGPKGPAGERG 512
Query: 274 SQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHS 333
S P G P + R + G G + GS G D
Sbjct: 513 SPG-----PAGPKGSPGEAG----------RPGEAGLPGAKGLTGSPGSPGPDGKTGPPG 557
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
GR G G R Q GP+ A G P +
Sbjct: 558 PAGQDGRPGP-----PGPPGARGQAGVMGFPGPKGAA---GEPGKAG------------- 596
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGP--PGGEMTFSIPTHKCGL-----VIGRGGEN 446
G PGPPG G P G G QG GP P GE P G G GE
Sbjct: 597 ERGVPGPPGAVG-PAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEA 655
Query: 447 VKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP-- 504
K Q + G+ RG P E ++GP P GP
Sbjct: 656 GKPGEQGVPGDLGAPGPSGARGE--------RGFPG---------ERGVQGPPGPAGPRG 698
Query: 505 ---GPGGPGPAGPMG-PFNPG----PFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQP 556
PG G G G P PG P QG PG AG P P G+ P+
Sbjct: 699 ANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPG----PKGDRGDAGPKGAD 754
Query: 557 PAP-HDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQ 615
+P D + P A P GP GP A AP +GEP P P G
Sbjct: 755 GSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPA-GPTGARGAPGDRGEPGPPGPAGF 813
Query: 616 SDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYS 675
+ A QPGA + A K A GP PPG +
Sbjct: 814 AGPPGA-----------DGQPGAKGEPGDAGA-----KGDAGPPGPAGPAGPPGPIGNVG 857
Query: 676 AAWAEYYRQQAAYYGQT--PGPGGPQPPPTQQG 706
A A+ R A G T PG G PP G
Sbjct: 858 APGAKGARGSAGPPGATGFPGAAGRVGPPGPSG 890
Score = 67.8 bits (164), Expect = 3e-11
Identities = 184/738 (24%), Positives = 223/738 (30%), Gaps = 167/738 (22%)
Query: 6 TGGP-PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQ 60
TG P PGP G G AG G PPGPPGA + G G PG G G G AG
Sbjct: 541 TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV 600
Query: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPES 120
P G PG A D A+ G GF G G E+
Sbjct: 601 P---GPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPA--GPPGEA 655
Query: 121 KKLASQGDSISSQLGPIHPPPRTSMTEE-------YRVPDGMVGLIIGRGGEQINKIQQD 173
K QG + LG P P + E + P G G G + + D
Sbjct: 656 GKPGEQG--VPGDLGA--PGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGD 711
Query: 174 SGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNG 233
+G +P S G P L G P RG G PG D + G
Sbjct: 712 AGAPG--APGSQGAP----GLQGMPGE-------------RGAAGLPGPKGDRGDAG--- 749
Query: 234 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQ 293
P G G G + ++ L G G DK P
Sbjct: 750 -------PKGADG---SPGKDGVRGLTGPIG------PPGPAGAPGDKGESGPSGPAGPT 793
Query: 294 QACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAG 353
A +G GDR E G G P G G DAG
Sbjct: 794 GA------------RGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPG--------DAG 833
Query: 354 VRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGM--PPGGR 411
+ GP A GPP + G PG G G PPG
Sbjct: 834 AK------GDAGPPGPAGPAGPPGPIGNV-------------GAPGAKGARGSAGPPGAT 874
Query: 412 GRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPN 471
G G GPPG P G GG+ + G E+ PP
Sbjct: 875 GFPGAAGRVGPPGPSGNAG-PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGE 933
Query: 472 FKLFIIRGSPQQIDHAKQLIEEKIEGPL-CPVGPGPGG----------PGPAGPMG-PFN 519
+GSP +GP P PGP G PG G G P
Sbjct: 934 ------KGSPGA------------DGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL 975
Query: 520 PGPFN----QGPPGA-----PPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAA 570
PGP QGP GA PP GPP PP G + + P A P + + A
Sbjct: 976 PGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPP---GESGREGAPGAEGSPGRDGSPGA 1032
Query: 571 DPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIG 630
+ P GP PG AP AP G + G++
Sbjct: 1033 KGDRGETG--------PAGP-PGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGA 1083
Query: 631 QQPQQPGAP--PQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAY 688
+ P P P + + + + K + GP PPGS + + A
Sbjct: 1084 RGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGAS-------- 1135
Query: 689 YGQTPGPGGPQPPPTQQG 706
GP GP+ PP G
Sbjct: 1136 -----GPAGPRGPPGSAG 1148
Score = 67.4 bits (163), Expect = 4e-11
Identities = 198/778 (25%), Positives = 260/778 (33%), Gaps = 142/778 (18%)
Query: 8 GPPPGPP-----PPAGGGGGAGGAGGGPPP----GPPGAGDRGGGGPGGGGPGGGSAGGP 58
G PPGP P A G G GA G P P GPPG G G P G G P
Sbjct: 424 GGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEP--GPTGLP 481
Query: 59 SQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQP 118
P GGPG R AD V + A + G S + G G + P
Sbjct: 482 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPG------EAGLP 535
Query: 119 ESKKLASQGDSISSQLGPIHP--PPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGC 176
+K L S GP PP + + P G G RG + G
Sbjct: 536 GAKGLTGSPGS----PGPDGKTGPPGPAGQDGRPGPPGPPG---ARGQAGVMGFPGPKGA 588
Query: 177 KVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGT-- 234
+ + G ER V G P +V A + ++G GP G + G G+
Sbjct: 589 ----AGEPGKAGERGV--PGPPGAVGPAGKD-GEAGAQGPPGPAGPAGERGEQGPAGSPG 641
Query: 235 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 294
Q + PAG G GK GE + + G G + ++ ++ P +
Sbjct: 642 FQGLPGPAGPPG-EAGKPGE--QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRG 698
Query: 295 ACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGV 354
A + + D G G G+ G +P R + G+ G G+ + DAG
Sbjct: 699 ANGAPGNDGAKGDAGAPGAPGSQGA--PGLQGMPGERGAAGLP-GPKGD-----RGDAGP 750
Query: 355 RIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGP---------------PG 399
+ G + +GPP A D +S SGP PG
Sbjct: 751 KGADGSPGKDGVRGLTGPIGPPG----PAGAPGDKGESGPSGPAGPTGARGAPGDRGEPG 806
Query: 400 PPGGPGM--PPGGRGR---------GRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGEN 446
PPG G PPG G+ +G+ GPPG G P G +G
Sbjct: 807 PPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARG 866
Query: 447 VKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGP 506
TG R PP N G P A +E +GP GP
Sbjct: 867 SAGPPGATGFPGAAGRVGPPGPSGN------AGPPGPPGPAG---KEGGKGPRGETGPA- 916
Query: 507 GGPGPAGPMGPFNPGPFNQ-GPPGAPPHAGGP--PPHQ----------YPPQGWGNTYPQ 553
G PG GP GP PGP + G PGA AG P P Q P Q +P
Sbjct: 917 GRPGEVGPPGP--PGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG 974
Query: 554 WQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV--------PGPAPAPAAPPAQG 605
P+ +P K + A + PPGP+ PG + AP A+G
Sbjct: 975 LPGPS-GEPGKQGPSGASGE-----------RGPPGPMGPPGLAGPPGESGREGAPGAEG 1022
Query: 606 EPPQP-PPTGQSDYTKAWEEYYKKIGQQPQQPGAP----PQQDYTKAWEEYYKKQAQVA- 659
P + P + D + P PGAP P K+ + A A
Sbjct: 1023 SPGRDGSPGAKGDRGETGP------AGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076
Query: 660 -----TGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQT--PGPGGPQPPPTQQGQQQA 710
GP P G + D + R + G + GP GP P +QG A
Sbjct: 1077 PVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGA 1134
Score = 65.5 bits (158), Expect = 2e-10
Identities = 101/327 (30%), Positives = 116/327 (35%), Gaps = 56/327 (17%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
GP GP G PG PPG G QG GPPG GE S P G G G+N + +
Sbjct: 182 GPSGPRGLPG-PPGAPGP---QGFQGPPGEPGEPGASGPMGPRG-PPGPPGKN--GDDGE 234
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP--GPGGPGP 511
G + PP L G P H + +G P GP PG PG
Sbjct: 235 AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGE 294
Query: 512 AGPMGPFNPG--PFNQGPPGAPPHAG-----GPPPHQYPPQGWGNTYPQWQPPAPHDPSK 564
G G P P +G PGAP AG G PP G T P P P +
Sbjct: 295 NGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPP---GPTGPAGPPGFP--GAV 349
Query: 565 AAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPA--PAA-PPAQGEPPQPPPTGQSDYTKA 621
A A P + + PGP PGPA A PA P A G+P G A
Sbjct: 350 GAKGEAGPQGPRGSEGPQGVRGEPGP-PGPAGAAGPAGNPGADGQPGAKGANGAPGIAGA 408
Query: 622 WEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEY 681
+ PQ PG PP G PGA PGS+ D A
Sbjct: 409 PGFPGARGPSGPQGPGGPP---------------GPKGNSGEPGA-PGSKGDTGAK---- 448
Query: 682 YRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
PGP G Q PP G++
Sbjct: 449 ---------GEPGPVGVQGPPGPAGEE 466
Score = 64.7 bits (156), Expect = 3e-10
Identities = 72/242 (29%), Positives = 81/242 (33%), Gaps = 64/242 (26%)
Query: 396 GPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
GPPGP G PG+ PPG GR G G PG + G K +
Sbjct: 995 GPPGPMGPPGLAGPPGESGREGAPGAEGSPGRD----------------GSPGAKGDRGE 1038
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP-GP-GGPGP 511
TG P G P G+P + A + + GP P GP GP G GP
Sbjct: 1039 TGP-------AGPPGAPGAP-----GAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGP 1086
Query: 512 AGPMGPFNPG--PFNQGPPGAPPHAG-----GPPPHQYPPQGWGNTYPQWQ--PPAPHDP 562
AGP GP QG G H G GPP PP G P P P P
Sbjct: 1087 AGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPG---PPGSPGEQGPSGASGPAGPRGP 1143
Query: 563 SKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAP----------APAAPPAQGEPPQPPP 612
+A A PGP+ P P P PP PP PP
Sbjct: 1144 PGSAGAPGKDGLNGL----------PGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPS 1193
Query: 613 TG 614
G
Sbjct: 1194 AG 1195
Score = 53.9 bits (128), Expect = 5e-07
Identities = 97/359 (27%), Positives = 115/359 (32%), Gaps = 69/359 (19%)
Query: 396 GPPGP-----------PGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGG 444
GPPGP P GP P G RG +G GPPG P G G
Sbjct: 770 GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPG-------PAGFAGPPGADGQ 822
Query: 445 ENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP 504
K GA + P G P I + + G P G
Sbjct: 823 PGAKGEPGDAGAKGDAGPPGPAGP---------AGPPGPIGNVGAPGAKGARGSAGPPG- 872
Query: 505 GPGGPGPAGPMGPFNPGPF-NQGPPGAPPHAG-----GPPPHQYPPQGWGNTYPQWQP-P 557
G PG AG +GP PGP N GPPG P AG GP P G P P P
Sbjct: 873 ATGFPGAAGRVGP--PGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGP 930
Query: 558 APHDPSKAA----AAAADPNAAWAAYYSHYYQQP--------PGPVPGPAPAPAAPP--- 602
A S A A P A P PG +PGP+ P
Sbjct: 931 AGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG-LPGPSGEPGKQGPSG 989
Query: 603 AQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGG 662
A GE P P G E ++ P G+P + A + + + G
Sbjct: 990 ASGERGPPGPMGPPGLAGPPGESGRE--GAPGAEGSPGRDGSPGAKGD----RGETGPAG 1043
Query: 663 GPGAP--PGSQPDYSAAWAEYYRQQAAYYGQTP--------GPGGPQPPPTQQGQQQAQ 711
PGAP PG+ A R + G GP GPQ P +G+ Q
Sbjct: 1044 PPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQ 1102
Score = 53.9 bits (128), Expect = 5e-07
Identities = 67/226 (29%), Positives = 73/226 (32%), Gaps = 68/226 (30%)
Query: 395 SGPPGPPGGPGM-----PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKA 449
+GP GPPG PG P G G+ +G GP G P G V RG +
Sbjct: 1039 TGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAG-------PAGPVGPVGARGPAGPQG 1091
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGP 509
G E GD K RG G P GP PG P
Sbjct: 1092 PRGDKGETGE-------QGDRGIKGH--RG---------------FSGLQGPPGP-PGSP 1126
Query: 510 GPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAA 569
G GP G P GP G P AG P G PP P + A
Sbjct: 1127 GEQGPSGASGPA----GPRGPPGSAGAP-----GKDGLNGLPGPIGPPGPRGRTGDAGPV 1177
Query: 570 ADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEP----PQPP 611
PPGP PGP P P PP+ G PQPP
Sbjct: 1178 G----------------PPGP-PGP-PGPPGPPSAGFDFSFLPQPP 1205
Score = 52.0 bits (123), Expect = 2e-06
Identities = 145/581 (24%), Positives = 183/581 (31%), Gaps = 91/581 (15%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGGGSAGGPSQP-----PG-G 64
G P P+G G G G GPPG AG RG G G G AG P P PG
Sbjct: 668 GAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQ 727
Query: 65 GGPGIRKDAFADAVQRARQIAAKIGGDAATT---VNNSTPDFGFGGQKRQLEDGDQPESK 121
G PG R A + R A G D + V T G G GD+ ES
Sbjct: 728 GMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGA--PGDKGESG 785
Query: 122 KLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIS 181
G + + P + P G G +G + D+G
Sbjct: 786 PSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAG 845
Query: 182 PDSGGLPERSVSLTGAPESVQKAKM--MLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIM 239
P P +V GA + A + GR GPPG + N G G
Sbjct: 846 PAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGP---SGNAGPPG------ 896
Query: 240 IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ----NTNVDKPLRIIGDPYKVQQA 295
P G AG GKG R G G + D P G P A
Sbjct: 897 -PPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIA 955
Query: 296 CEM-VMDILRERDQGGF-------GDRNEYG-SRIGGGIDVPVPRHSVGVVIGRSGEMIK 346
+ V+ + +R + GF G+ + G S G P P G+ G GE
Sbjct: 956 GQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLA-GPPGE--- 1011
Query: 347 KIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGM 406
+G E G P R + + D ++ +GPPG PG PG
Sbjct: 1012 -----------------SGREGAPGAEGSPGR-DGSPGAKGDRGETGPAGPPGAPGAPGA 1053
Query: 407 P----PGGRGRGRGQ-------------------------GNWGPPGGEMTFSIPTHK-- 435
P P G+ RG+ G+ G G + I H+
Sbjct: 1054 PGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGF 1113
Query: 436 CGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
GL G +GA + PP + G P I
Sbjct: 1114 SGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGD 1173
Query: 496 EGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGG 536
GP+ P GP PG PGP GP F PP H GG
Sbjct: 1174 AGPVGPPGP-PGPPGPPGPPSAGFDFSFLPQPPQEKAHDGG 1213
Score = 50.1 bits (118), Expect = 7e-06
Identities = 97/366 (26%), Positives = 112/366 (30%), Gaps = 71/366 (19%)
Query: 396 GPPGPPGGPGM--------------PPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKC 436
GPPG GGPG P G RG G G PG GE +P K
Sbjct: 482 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEA--GLPGAK- 538
Query: 437 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFK----LFIIRGSPQQIDHAKQLIE 492
GL G G + R PP G P + + G + E
Sbjct: 539 GLTGSPGSPGPDGKTGPPGPAGQDGRPGPP-GPPGARGQAGVMGFPGPKGAAGEPGKAGE 597
Query: 493 EKIEGPLCPVGP--------GPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPP 544
+ GP VGP G PGPAGP G QGP G+P G P P PP
Sbjct: 598 RGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG----EQGPAGSPGFQGLPGP-AGPP 652
Query: 545 QGWGNTYPQWQP---PAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGP----------- 590
G Q P AP PS A P Q PPGP
Sbjct: 653 GEAGKPGEQGVPGDLGAP-GPSGARGERGFPG-------ERGVQGPPGPAGPRGANGAPG 704
Query: 591 ---VPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKA 647
G A AP AP +QG P G+ + P+ P +D +
Sbjct: 705 NDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRG 764
Query: 648 WEEYYKKQAQVATGG--GPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQ 705
G G P G A A R + PGP G PP
Sbjct: 765 LTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPG----PPGPAGFAGPPGAD 820
Query: 706 GQQQAQ 711
GQ A+
Sbjct: 821 GQPGAK 826
Score = 49.3 bits (116), Expect = 1e-05
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG-----GGPGGGGPGG-----GSAG--G 57
PPGPP G G +G +G P GPPG+ G G PG GP G G AG G
Sbjct: 1119 PPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVG 1178
Query: 58 PSQPPGGGGP 67
P PPG GP
Sbjct: 1179 PPGPPGPPGP 1188
Score = 47.8 bits (112), Expect = 4e-05
Identities = 27/66 (40%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 3 DYSTGGP--PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
D GP P GPP P G G G G GPPGA G G PG GP
Sbjct: 837 DAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPG 896
Query: 61 PPGGGG 66
PPG G
Sbjct: 897 PPGPAG 902
Score = 47.0 bits (110), Expect = 6e-05
Identities = 36/78 (46%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 5 STGG-PPPGPPPPAGGGG-----GAGGAGG--GPP--PGPPGA----GDRGGGGPGGGGP 50
STGG PGP P+G G GA G G GPP PG PGA G RG GP G
Sbjct: 171 STGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNG 230
Query: 51 GGGSAGGPSQPPGGGGPG 68
G AG P +P G PG
Sbjct: 231 DDGEAGKPGRPGERGPPG 248
Score = 46.6 bits (109), Expect = 8e-05
Identities = 86/340 (25%), Positives = 105/340 (30%), Gaps = 98/340 (28%)
Query: 395 SGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 454
+GPPGP G P PPG G +G GP G RG E + + +
Sbjct: 331 AGPPGPTG-PAGPPGFPGAVGAKGEAGPQGP----------------RGSEGPQGVRGEP 373
Query: 455 GAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGP 514
G + P G+P G P K + PG PG GP
Sbjct: 374 GP-PGPAGAAGPAGNPGAD-----GQPGA----------KGANGAPGIAGAPGFPGARGP 417
Query: 515 MGPFNPG-----PFNQGPPGAPPHAG--------GPPPHQYPP---QGWGNTYPQWQP-- 556
GP PG N G PGAP G GP Q PP G + +P
Sbjct: 418 SGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGP 477
Query: 557 ---PAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPV-----PGPAPAPAAPPAQGEPP 608
P P + P A A P GP PGPA +P G P
Sbjct: 478 TGLPGPPGERGGPGSRGFPGADGVA-------GPKGPAGERGSPGPAGPKGSPGEAGRPG 530
Query: 609 QPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPP 668
+ G T + PG+P T A GP PP
Sbjct: 531 EAGLPGAKGLTGS--------------PGSPGPDGKTGP-----PGPAGQDGRPGPPGPP 571
Query: 669 GSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
G+ R QA G PGP G P + G++
Sbjct: 572 GA------------RGQAGVMG-FPGPKGAAGEPGKAGER 598
Score = 45.8 bits (107), Expect = 1e-04
Identities = 31/68 (45%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 7 GGPPP----GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGGGSAGGPSQP 61
G P P GPP PAG G G G P G PG G+RGG G G PG GP P
Sbjct: 449 GEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPG-SRGFPGADGVAGPKGP 507
Query: 62 PG-GGGPG 68
G G PG
Sbjct: 508 AGERGSPG 515
Score = 43.5 bits (101), Expect = 7e-04
Identities = 46/134 (34%), Positives = 50/134 (37%), Gaps = 22/134 (16%)
Query: 495 IEGPLCPVGPGPGGPGPAGPMG----PFNPG-PFNQGPPG--APPHAGGPPPHQ----YP 543
+EGP GP G GPAGP G P PG P GPPG PP GG Q Y
Sbjct: 110 VEGPKGDTGPR-GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYD 168
Query: 544 PQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPA 603
+ G P P PS P A +Q PPG PG P + P
Sbjct: 169 EKSTGGI----SVPGPMGPSGPRGLPGPPGAPG----PQGFQGPPGE-PG-EPGASGPMG 218
Query: 604 QGEPPQPPPTGQSD 617
PP PP D
Sbjct: 219 PRGPPGPPGKNGDD 232
Score = 43.5 bits (101), Expect = 7e-04
Identities = 31/82 (37%), Positives = 33/82 (40%), Gaps = 25/82 (30%)
Query: 10 PPGPPPPAGGGGG----------------------AGGAGGGPPPGPPGA-GDRGGGGPG 46
PPGPP P G GG G +G PGPPGA G +G GP
Sbjct: 146 PPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPP 205
Query: 47 G--GGPGGGSAGGPSQPPGGGG 66
G G PG GP PPG G
Sbjct: 206 GEPGEPGASGPMGPRGPPGPPG 227
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/67 (38%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 8 GPPPGPPP-----PAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPP 62
GPP P P P G G G +G P GPPG + G G PG GP P
Sbjct: 191 GPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQ 250
Query: 63 GGGG-PG 68
G G PG
Sbjct: 251 GARGLPG 257
Score = 42.0 bits (97), Expect = 0.002
Identities = 24/56 (42%), Positives = 24/56 (42%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGG 65
P GPP AG G G G P GPPG R G G PG GP PP G
Sbjct: 1140 PRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAG 1195
Score = 41.6 bits (96), Expect = 0.003
Identities = 34/99 (34%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGG----PGGGGPGGGSAGGPSQPPGG 64
PPG P G G G G PPGPPG GD G G PG GP G G P
Sbjct: 204 PPGEPGEPGASGPMGPRG---PPGPPGKNGDDGEAGKPGRPGERGP-PGPQGARGLPGTA 259
Query: 65 GGPGIRKDAFADAVQRARQIAAKIG--GDAATTVNNSTP 101
G PG++ + A+ A G G+ + N P
Sbjct: 260 GLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAP 298
Score = 39.7 bits (91), Expect = 0.010
Identities = 30/76 (39%), Positives = 32/76 (42%), Gaps = 19/76 (25%)
Query: 11 PGPPPPAG--GGGGAGG--------------AGGGPPPGPPG-AGDRGGGGPGGGGPGGG 53
PGPP P G G G GG GG PGP G +G RG GP G G
Sbjct: 141 PGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQG 200
Query: 54 SAGGPSQP--PGGGGP 67
G P +P PG GP
Sbjct: 201 FQGPPGEPGEPGASGP 216
Score = 39.7 bits (91), Expect = 0.010
Identities = 27/75 (36%), Positives = 29/75 (38%), Gaps = 16/75 (21%)
Query: 10 PPGPPPPAGGGGGAGGAGGGP------------PPGPPGA----GDRGGGGPGGGGPGGG 53
P GP P G G G G PPGPPG+ G G GP G G
Sbjct: 1086 PAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPG 1145
Query: 54 SAGGPSQPPGGGGPG 68
SAG P + G PG
Sbjct: 1146 SAGAPGKDGLNGLPG 1160
Score = 35.4 bits (80), Expect = 0.18
Identities = 25/62 (40%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGGGSAGGPSQPPGG 64
G P G G G G P GP G R G G PG GP G GP PPG
Sbjct: 98 GSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPP--GPPGPPGL 155
Query: 65 GG 66
GG
Sbjct: 156 GG 157
Score = 34.7 bits (78), Expect = 0.31
Identities = 29/73 (39%), Positives = 29/73 (39%), Gaps = 14/73 (19%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGG------------GPGGGSAG 56
P GP PAG G G G PGPPG G G G GG GG S
Sbjct: 119 PRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVP 178
Query: 57 GPSQPPGGGG-PG 68
GP P G G PG
Sbjct: 179 GPMGPSGPRGLPG 191
Score = 32.3 bits (72), Expect = 1.6
Identities = 25/64 (39%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Query: 10 PPGPPPPAGGGGGAGGAGGGP-PPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPG 68
P GPP P G G AG G P PPGPPG G P G P + GG
Sbjct: 1161 PIGPPGPRGRTGDAGPV-GPPGPPGPPGP----PGPPSAGFDFSFLPQPPQEKAHDGGRY 1215
Query: 69 IRKD 72
R D
Sbjct: 1216 YRAD 1219
>gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens]
Length = 365
Score = 80.5 bits (197), Expect = 5e-15
Identities = 85/354 (24%), Positives = 145/354 (40%), Gaps = 37/354 (10%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + K++++SG ++ IS G PER ++L G ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKKMREESGARINIS--EGNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 ISS---SMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYK----VQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-P 330
N + ++ + I G P V+Q C ++++ L + G+ +P P
Sbjct: 140 N-STERAITIAGIPQSIIECVKQICVVMLETLSQSPP--------------KGVTIPYRP 184
Query: 331 RHSVGVVIGRSGEMIKKIQNDAG-----VRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
+ S VI G+ +D+ D GP A+ +
Sbjct: 185 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT 244
Query: 386 INDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFS----IPTHKCGLVIG 441
L +S P G G +G WG T S IP G +IG
Sbjct: 245 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIG 304
Query: 442 RGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
R G + I Q +GA ++I+ + + D + I GS I A+ LI ++
Sbjct: 305 RQGAKINEIRQMSGAQIKIANPVEGSTD---RQVTITGSAASISLAQYLINVRL 355
Score = 68.2 bits (165), Expect = 3e-11
Identities = 62/230 (26%), Positives = 93/230 (40%), Gaps = 37/230 (16%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +KK++ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
S PP + +P +CG +IG+GG +K I +
Sbjct: 83 ISSSMTNSTAASRPPV----------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQ-IDHAKQLIEEKIE--------GPLCPVGP 504
TGA V+++ + PN + I G PQ I+ KQ+ +E G P P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 505 GPGGPGP--AGPMGPFNPGPFNQGPPGAP------PHAGGPPPHQYPPQG 546
P AG ++ G + P P GPP Y QG
Sbjct: 185 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG 234
Score = 55.1 bits (131), Expect = 2e-07
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 229 GGQNGTVQEIMIPAGK-AGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIG 287
GG N T+ ++ GK G +IGK GE++K+++E +G ++ + S+ ++ + + G
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAG 63
Query: 288 DPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKK 347
+ +A M++D L E D + SR + + VP G +IG+ G IK+
Sbjct: 64 PTNAIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 348 IQNDAGVRIQFKQDD-GTGPEKIAHIMG-PPDRCEHAARIINDLLQSLRSGP-------- 397
I+ G ++Q D E+ I G P E +I +L++L P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 398 -PGPPGGPGMPPGGRGR 413
P P P + GG+ R
Sbjct: 183 RPKPSSSPVIFAGGQDR 199
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
+ E +P+ ++G IIGR G +IN+I+Q SG +++I+ G +R V++TG+ S+ A+
Sbjct: 289 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 348
Query: 206 MMLDDIVSRGRGG 218
+++ +S GG
Sbjct: 349 YLINVRLSSETGG 361
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ ISS + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESV 201
P ER++++ G P+S+
Sbjct: 139 PNSTERAITIAGIPQSI 155
Score = 30.0 bits (66), Expect = 7.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 326 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
++ +P +G +IGR G I +I+ +G +I+ ++ I G A +
Sbjct: 291 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 350
Query: 386 INDLLQSLRSG 396
IN L S G
Sbjct: 351 INVRLSSETGG 361
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 80.5 bits (197), Expect = 5e-15
Identities = 72/226 (31%), Positives = 84/226 (37%), Gaps = 35/226 (15%)
Query: 501 PVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPH 560
P+GPGPG GP P+ P P Q PP P PPPHQ PP + Q PP P
Sbjct: 46 PMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQ-PPPPPQ 104
Query: 561 DPSKAAAA----------AADPNAAWAAYYSHYYQ-QPPGPVPGPAPAPAAPPAQGEPPQ 609
D SK A +A P ++ A + PPG PGP P P P
Sbjct: 105 DSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGA 164
Query: 610 PPPTGQSDYTKAWEEYYKKIGQQPQQ------PGAPPQQDYTKAWEEYYKKQAQVATGGG 663
PPPT S + G P PG P+Q + K GGG
Sbjct: 165 PPPTPPSSGVPTTP---PQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGG 221
Query: 664 PG--------APP---GSQPDYSAAWAEYYRQQAAYYGQTPGPGGP 698
PG PP G +P Y QQ + Q P PGGP
Sbjct: 222 PGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQ---HHQGPPPGGP 264
Score = 56.2 bits (134), Expect = 1e-07
Identities = 32/69 (46%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 6 TGGPPPGPPP--PAGGGGGAGGAGGGPPPGP---PGAGDRGGGGPGGGGPGGGSAGGPSQ 60
T PP PPP P+ G GGPPP P PG G GPG GGP GG G +
Sbjct: 158 TSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPK 217
Query: 61 PPGGGGPGI 69
P GGGPG+
Sbjct: 218 P--GGGPGL 224
Score = 55.5 bits (132), Expect = 2e-07
Identities = 31/63 (49%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPP--GG 64
GGPPP PPA G G GP PG P G GG GGGPG + GG +PP GG
Sbjct: 182 GGPPP---PPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGG 238
Query: 65 GGP 67
G P
Sbjct: 239 GEP 241
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/77 (41%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 8 GPPPGPPPPAGGGGGAGGA--GGGPPPGPPGAGDRGGGGP----GGGGPGGGSAGGP--- 58
GP PGP G GG GG GG P G PG GG GGG P GG P
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYH 252
Query: 59 ---SQPPGGGGPGIRKD 72
Q P GGPG R +
Sbjct: 253 QQHHQGPPPGGPGGRSE 269
Score = 42.4 bits (98), Expect = 0.002
Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 5 STGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGG 64
S+ PP PP G G+G GP P PP A PG P S+G P+ PP
Sbjct: 128 SSSAPPATPPT----SGAPPGSGPGPTPTPPPAVT--SAPPGAPPPTPPSSGVPTTPPQA 181
Query: 65 GGP 67
GGP
Sbjct: 182 GGP 184
Score = 41.6 bits (96), Expect = 0.003
Identities = 26/61 (42%), Positives = 27/61 (44%), Gaps = 14/61 (22%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGG-------------GPGGGGPGGG 53
GG PG P P GGG G GG P P G G+ GG GP GGPGG
Sbjct: 209 GGKMPGGPKP-GGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGR 267
Query: 54 S 54
S
Sbjct: 268 S 268
Score = 39.7 bits (91), Expect = 0.010
Identities = 26/64 (40%), Positives = 26/64 (40%), Gaps = 14/64 (21%)
Query: 497 GPLCPVGPGPGGPG----PAGPMGPFNPGPFNQGPPGAPPHAGG----------PPPHQY 542
GP GPGPGGP P GP PG G PPH GG PP HQ
Sbjct: 195 GPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQ 254
Query: 543 PPQG 546
QG
Sbjct: 255 HHQG 258
Score = 38.1 bits (87), Expect = 0.028
Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 18 GGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPP 62
GGGGG GG P PPG G GP G GPG P PP
Sbjct: 20 GGGGGRGGLHDFRSP-PPGMGLNQNRGPMGPGPGQSGPKPPIPPP 63
Score = 38.1 bits (87), Expect = 0.028
Identities = 26/61 (42%), Positives = 26/61 (42%), Gaps = 13/61 (21%)
Query: 15 PPAGGGGGAG-GAGGGPPPGPPGAGDRGGG------GPGGGGPGGGSAGGPSQPPGGGGP 67
PP GGGGG G A G PP G G GG GP GG Q P G GP
Sbjct: 632 PPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTERFGQGGAGPVGG------QGPRGMGP 685
Query: 68 G 68
G
Sbjct: 686 G 686
Score = 33.9 bits (76), Expect = 0.54
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 11/61 (18%)
Query: 9 PPPGP-----PPPAGGGGGAGGAGGGPPPGP--PGAGDRGGGGPGGGGPGGGSAGGPSQP 61
PPP P P A G G A G G PP P A G P G GPG P+ P
Sbjct: 99 PPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPT----PTPP 154
Query: 62 P 62
P
Sbjct: 155 P 155
Score = 30.8 bits (68), Expect = 4.5
Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 27/92 (29%)
Query: 396 GPPGPPG-------------GPGMPPGGRGRGRGQGNWGP----PGGEMTFSIPTHKCGL 438
GPP PP GPG P GG+ G + GP PGG P H
Sbjct: 183 GPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPK---PPH---- 235
Query: 439 VIGRGGENVKAINQQTGAFVEISRQLPPNGDP 470
RGG + Q + + Q PP G P
Sbjct: 236 ---RGGGEPRGGRQHHPPYHQQHHQGPPPGGP 264
Score = 30.8 bits (68), Expect = 4.5
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Query: 297 EMVMDILRERDQG----GFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDA 352
EM + R+R++ G+ D E R+GGG + ++G G G+ +
Sbjct: 584 EMEEQMRRQREESYSRMGYMDPRERDMRMGGGGAM-----NMGDPYGSGGQKFPPLGGGG 638
Query: 353 GVRIQFKQDDGTGPEKIA-HIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPG-- 409
G I ++ + G P ++ +MG R E + +GP G G GM PG
Sbjct: 639 G--IGYEANPGVPPATMSGSMMGSDMRTERFGQG--------GAGPVGGQGPRGMGPGTP 688
Query: 410 -GRGRGR 415
G GRGR
Sbjct: 689 AGYGRGR 695
Score = 30.0 bits (66), Expect = 7.7
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
Query: 41 GGGGPGGGGPGGGSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNST 100
GGG G P G +GG PP GGG GI +A V A + +G D T
Sbjct: 614 GGGAMNMGDPYG--SGGQKFPPLGGGGGIGYEA-NPGVPPATMSGSMMGSDM------RT 664
Query: 101 PDFGFGG 107
FG GG
Sbjct: 665 ERFGQGG 671
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 80.1 bits (196), Expect = 7e-15
Identities = 189/758 (24%), Positives = 234/758 (30%), Gaps = 150/758 (19%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQP--PGG-- 64
PPGP G G G G PGP GA G+RG G G G G P +P PG
Sbjct: 514 PPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARG 573
Query: 65 --GGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQP---- 118
G PG++ A + G + + G G K D +P
Sbjct: 574 LTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAG 633
Query: 119 ----ESKKLASQGDSISSQLGPIHPPPRTSMTEEYRV--PDGMVGL-----IIGRGGEQI 167
++ A D GP+ PP E P G GL G GG+
Sbjct: 634 NAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPG 693
Query: 168 NK-IQQDSGCKVQISP--DSGGLPER-SVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQF 223
++ + D G + P + G ER +TG P A D +G GP G
Sbjct: 694 DQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPD-GPKGSPGPSGTP 752
Query: 224 HDNANGGQNGTVQEIMI-----PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 278
D G G E I P G G + KG E G+ L G
Sbjct: 753 GDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPT 812
Query: 279 VDK----PLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSV 334
+K P ++G P +G G R E G G P
Sbjct: 813 GEKGEPGPRGLVGPP----------------GSRGNPGSRGENGPTGAVGFAGPQGPDGQ 856
Query: 335 GVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLR 394
V G GE +K DAG GP+ +A GP H + L
Sbjct: 857 PGVKGEPGEPGQK--GDAG---------SPGPQGLAGSPGP-----HGPNGVPGLKGG-- 898
Query: 395 SGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 454
G GPPG G PG GR G G PG P G E +
Sbjct: 899 RGTQGPPGATGF-PGSAGRVGPPGPAGAPGPAGPLGEP----------GKEGPPGLRGDP 947
Query: 455 GAFVEISRQLP--PNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG------- 505
G+ + + P P G P K G P E+ GP P GP
Sbjct: 948 GSHGRVGDRGPAGPPGGPGDK-----GDPG---------EDGQPGPDGPPGPAGTTGQRG 993
Query: 506 -------------PGGPGPAGPMGPFNP--GPFNQGPPG--APPHAGGPPPHQYPPQGWG 548
PG PGPAG G P ++GPPG PP + GP P G
Sbjct: 994 IVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAG 1053
Query: 549 NTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPP 608
N P DP A Q PG PGP AP +G+P
Sbjct: 1054 ND----GTPGRDGAVGERGDRGDPGPAGLP----GSQGAPG-TPGPVGAPGDAGQRGDPG 1104
Query: 609 QPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPP 668
P G K+ PQ P + + G PG PP
Sbjct: 1105 SRGPIGPPGRAG------KRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPG-PP 1157
Query: 669 GSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQG 706
G + +A PGP GP+ PP G
Sbjct: 1158 GPNGEQGSA-------------GIPGPFGPRGPPGPVG 1182
Score = 77.0 bits (188), Expect = 6e-14
Identities = 178/733 (24%), Positives = 227/733 (30%), Gaps = 214/733 (29%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGG-PGGGGPGG--GSAGGPSQPPGGGG 66
PG P G G G G PPG G G+RG G PG GP G G G P QP G
Sbjct: 118 PGLVPVVTGIRGRPGPAG--PPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGP 175
Query: 67 PGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQ 126
PG D + R F Q L+ E L SQ
Sbjct: 176 PGHPSHPGPDGLSRP-----------------------FSAQMAGLD-----EKSGLGSQ 207
Query: 127 GDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGG 186
+ +GP+ P R P G+ G Q G P G
Sbjct: 208 VGLMPGSVGPVGP----------RGPQGLQG--------------QQGGAGPTGPPGEPG 243
Query: 187 LPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAG 246
P + I SRG GPPG+ ++ G+NG E+ AG G
Sbjct: 244 DPGP-----------------MGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGF-AGSPG 285
Query: 247 LVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEM----VMDI 302
G + L+ G K ++ P +G P +A M
Sbjct: 286 ARGFPGAPGLPGLKGHRGHK-----------GLEGPKGEVGAPGSKGEAGPTGPMGAMGP 334
Query: 303 LRER----DQGGFGDRNEYGSRIGGGID-VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 357
L R ++G G + G R G+ P P +G+ G SG + G++ +
Sbjct: 335 LGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIP-GSSG-----FPGNPGMKGE 388
Query: 358 FKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMP--------PG 409
GPE GP Q +GPPGP G PG+P PG
Sbjct: 389 AGPTGARGPE------GPQG-------------QRGETGPPGPVGSPGLPGAIGTDGTPG 429
Query: 410 GRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTG--AFVEISRQLPPN 467
+G G GPPG P + G + I Q G + P
Sbjct: 430 AKGPTGSPGTSGPPGSAGPPGSPGPQ-------GSTGPQGIRGQPGDPGVPGFKGEAGPK 482
Query: 468 GDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP----GP-GGPGPAGPMGPFNP-- 520
G+P I+GP+ P G GP G PG GP GP
Sbjct: 483 GEPG--------------------PHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERG 522
Query: 521 GPFNQGPPGAP--PHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAA 578
P N+G PG+ P G + P G Q P P +P A N
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPG--- 579
Query: 579 YYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGA 638
Q P G + GP AP GE +P P G I QP G
Sbjct: 580 -----VQGPEGKL-GPLGAP------GEDGRPGPPGSIG-----------IRGQPGSMGL 616
Query: 639 PPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGP 698
P + G PG + A R G+ GP GP
Sbjct: 617 PGPK--------------------GSSGDPGKPGEAGNAGVPGQRGAPGKDGEV-GPSGP 655
Query: 699 QPPPTQQGQQQAQ 711
PP G++ Q
Sbjct: 656 VGPPGLAGERGEQ 668
Score = 67.4 bits (163), Expect = 4e-11
Identities = 176/648 (27%), Positives = 221/648 (34%), Gaps = 144/648 (22%)
Query: 6 TGGPP--PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPP 62
T GPP GPP G G G G PG PG G +G GP G PG GP PP
Sbjct: 439 TSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGE-PGPHGIQGPIGPP 497
Query: 63 GGGGP-GIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGF-------GGQKRQLED 114
G G G R D +G + + GF G + Q E
Sbjct: 498 GEEGKRGPRGD------------PGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGER 545
Query: 115 GDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRV--PDGMVGLIIGRGGEQINKIQQ 172
G S SQGD + G P +T V P+G +G +G GE +
Sbjct: 546 GPVGSSGPKGSQGD--PGRPGEPGLPGARGLTGNPGVQGPEGKLG-PLGAPGED-GRPGP 601
Query: 173 DSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQN 232
++ P S GLP S +G P +A G G PGQ G+
Sbjct: 602 PGSIGIRGQPGSMGLPGPKGS-SGDPGKPGEA----------GNAGVPGQRGAPGKDGEV 650
Query: 233 GTVQEIMIP--AGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPY 290
G + P AG+ G G + L G + G Q + GDP
Sbjct: 651 GPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQG--------VPGDP- 701
Query: 291 KVQQACEMVMDILRERDQGGFGDRNEYG-------SRIGGGIDVPVPRHSVGVVIGRSGE 343
V + ++G G+R E G + GG P+ S G G G+
Sbjct: 702 ------GAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPG-PSGTPGD 754
Query: 344 M----IKKIQNDAGVRIQFKQDDGT-GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPP 398
++ + + G+ GT GP+ +G A ND + L GP
Sbjct: 755 TGPPGLQGMPGERGIA-------GTPGPKGDRGGIGEKGAEGTAG---NDGARGL-PGPL 803
Query: 399 GPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFV 458
GPP GP P G +G +G GPPG RG + N TGA V
Sbjct: 804 GPP-GPAGPTGEKGEPGPRGLVGPPG----------------SRGNPGSRGENGPTGA-V 845
Query: 459 EISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVG-PGP----GGPGPAG 513
+ P+G P ++G P + G G PGP G PGP G
Sbjct: 846 GFAGPQGPDGQPG-----VKGEPGE------------PGQKGDAGSPGPQGLAGSPGPHG 888
Query: 514 PMG--PFNPGPFNQGPPGA---PPHAG--GPPPHQYPPQGWGNTYPQWQPPAPHDPSKAA 566
P G G QGPPGA P AG GPP P G P +P P
Sbjct: 889 PNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPG---PAGAPGPAGPLGEPGKEGPP---- 941
Query: 567 AAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTG 614
DP SH GP GP P GE QP P G
Sbjct: 942 GLRGDPG-------SHGRVGDRGPA-GPPGGPGDKGDPGEDGQPGPDG 981
Score = 67.0 bits (162), Expect = 6e-11
Identities = 174/663 (26%), Positives = 215/663 (32%), Gaps = 130/663 (19%)
Query: 10 PPGPPPPAGGGGGAGGAG-----GGP-PPGPPGAGDRGGGGPGGGG-PGGGSAGGPSQPP 62
P GPP AG G G G G P PPGPPG G G PG G PG A GP P
Sbjct: 655 PVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEG----GKPGDQGVPGDPGAVGPLGPR 710
Query: 63 GG-GGPGIRKDAFADAVQRARQIAAKIG--------GDAATTVNNSTPDF-GFGGQKRQL 112
G G PG R + + + +A G G + T + P G G++
Sbjct: 711 GERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIA 770
Query: 113 ----EDGDQPESKKLASQG----DSISSQLGPIHPPPRTSMTEEYRVPD--GMVGLIIGR 162
GD+ + ++G D GP+ PP T E P G+VG R
Sbjct: 771 GTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSR 830
Query: 163 GGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAP-ESVQKAKMMLDDIVSRGRGGPPG 221
G +G P P+ + G P E QK +G G PG
Sbjct: 831 GNPGSRGENGPTGAVGFAGPQG---PDGQPGVKGEPGEPGQKGDAGSPG--PQGLAGSPG 885
Query: 222 QFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDK 281
N G G + P G G G G L + G +
Sbjct: 886 PHGPNGVPGLKGG-RGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEG----- 939
Query: 282 PLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSVGV--VI 338
P + GDP + V D GG GD+ + G G D P P + G ++
Sbjct: 940 PPGLRGDPGSHGR----VGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIV 995
Query: 339 GRSGEMIKK----IQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLR 394
G G+ ++ + AG + TG + +GPP
Sbjct: 996 GMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGE---------- 1045
Query: 395 SGPPGPPGGPGMP--------------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVI 440
GP GP G G P PG G QG G PG P G
Sbjct: 1046 PGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPG-------PVGAPGDAG 1098
Query: 441 GRGGENVKAINQQTGAFVEISRQLP----PNGDPNFKLFIIRGSPQQIDHAKQLIEEKIE 496
RG + G + R LP P GD RG Q H + +
Sbjct: 1099 QRGDPGSRGPIGPPGRAGK--RGLPGPQGPRGDKGDHGD--RGDRGQKGHRGFTGLQGLP 1154
Query: 497 GPLCPVGPG-----PGGPGPAGPMGPF-------NPGPFNQ-GPPGAPPHAG-----GPP 538
GP P G PG GP GP GP NPGP GPPG G GPP
Sbjct: 1155 GPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPP 1214
Query: 539 PHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAP 598
PP PP P P AA D HY + P P+P
Sbjct: 1215 GEPGPP----------GPPGP--PGHLTAALGD-------IMGHYDESMPDPLPEFTEDQ 1255
Query: 599 AAP 601
AAP
Sbjct: 1256 AAP 1258
Score = 62.8 bits (151), Expect = 1e-09
Identities = 155/624 (24%), Positives = 204/624 (32%), Gaps = 114/624 (18%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPG----GGSAGGPSQPP 62
G P GPP G G G G P GPPG G G PG GS G P
Sbjct: 232 GAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPG 291
Query: 63 GGGGPGIRKDAFADAVQRARQIAAKIG--GDAATT----VNNSTPDFGFGGQKRQLEDGD 116
G PG++ ++ + G G+A T G G++ +L G
Sbjct: 292 APGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRL--GP 349
Query: 117 QPESKKLASQGDSISSQLGPIHP--PPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDS 174
Q + + G + + GP+ P P +S G G RG E + ++
Sbjct: 350 QGAPGQRGAHG--MPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGET 407
Query: 175 GCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGT 234
G + S GLP ++ G P + S G GPPG + G G+
Sbjct: 408 GPPGPVG--SPGLP-GAIGTDGTPGAKGPTG-------SPGTSGPPGSAGPPGSPGPQGS 457
Query: 235 V--QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKV 292
Q I G G+ KG K G++ + G + + GDP V
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPR-----GDPGTV 512
Query: 293 QQACEMVMDILRERDQGGFGDRNEYGSRIGGGID-VPVPRHSVGV--VIGRSGEMIKKIQ 349
G G+R G+R G D +P P+ + G +G SG K Q
Sbjct: 513 -------------GPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGP--KGSQ 557
Query: 350 NDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPG 409
D G + G + GP + G PG G PG PPG
Sbjct: 558 GDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL-------------GAPGEDGRPG-PPG 603
Query: 410 GRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGD 469
G G+ G PG + + P G+ GE A G
Sbjct: 604 SIGIRGQPGSMGLPGPKGSSGDP--------GKPGEAGNA------------------GV 637
Query: 470 PNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFN--QGP 527
P RG+P + GP PVGP PG G G GP P F GP
Sbjct: 638 PG-----QRGAPGKDGEV---------GPSGPVGP-PGLAGERGEQGPPGPTGFQGLPGP 682
Query: 528 PGAPPHAGGPPPHQYP--PQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQ 585
PG P G P P P G P+ + P + + A H
Sbjct: 683 PGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAG--GHGPD 740
Query: 586 QPPG-PVPGPAPAPAAPPA-QGEP 607
P G P P P PP QG P
Sbjct: 741 GPKGSPGPSGTPGDTGPPGLQGMP 764
Score = 52.4 bits (124), Expect = 1e-06
Identities = 47/142 (33%), Positives = 55/142 (38%), Gaps = 9/142 (6%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPG----AGDRGGGGPGG--GGPG-GGSAG--GPSQP 61
PGPP P G G AG G P GPPG +G G GP G G PG GS G GP P
Sbjct: 1154 PGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGP 1213
Query: 62 PGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESK 121
PG GP I + T D K + + G K
Sbjct: 1214 PGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLK 1273
Query: 122 KLASQGDSISSQLGPIHPPPRT 143
L+SQ +++ S G P RT
Sbjct: 1274 SLSSQIETMRSPDGSKKHPART 1295
Score = 52.0 bits (123), Expect = 2e-06
Identities = 113/430 (26%), Positives = 142/430 (33%), Gaps = 99/430 (23%)
Query: 7 GGPPP----GPPPPAGGGGGAGGAGGGPPPGPPGA----GDRGGGGPGGGGPGGGSAGGP 58
G P P G P P G G G GG GPPGA G G GP G G AG
Sbjct: 873 GSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPL 932
Query: 59 SQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQP 118
+P G PG+R D + R A GG D G G EDG
Sbjct: 933 GEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPG---------DKGDPG-----EDG--- 975
Query: 119 ESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKV 178
Q GP PP T + G+VG+ RG + + +G
Sbjct: 976 --------------QPGPDGPPGPAGTTGQ----RGIVGMPGQRGERGMPGLPGPAGTPG 1017
Query: 179 QISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEI 238
++ P + G P S G GP G ++ G++G V
Sbjct: 1018 KVGPTGATGDKGPPGPVGPPGSNGPV----------GEPGPEGPAGNDGTPGRDGAV--- 1064
Query: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLR-IIGDPYKVQQACE 297
G+ G G + Q G + G D R IG P + +
Sbjct: 1065 ----GERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGL 1120
Query: 298 MVMDILR--ERDQGGFGDRNEYGSRIGGGID-VPVPRHSVGVVIGRSGEMIKKIQNDAGV 354
R + D G GDR + G R G+ +P P G +GE Q AG+
Sbjct: 1121 PGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPP-------GPNGE-----QGSAGI 1168
Query: 355 RIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRG 414
F GP +GP S + G PGP G G PPG RG
Sbjct: 1169 PGPFGPRGPPGP------VGP----------------SGKEGNPGPLGPIG-PPGVRGSV 1205
Query: 415 RGQGNWGPPG 424
G GPPG
Sbjct: 1206 GEAGPEGPPG 1215
Score = 44.3 bits (103), Expect = 4e-04
Identities = 30/72 (41%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 2 SDYSTGGPPP-GPPPPAGGGGGAGGAGGGPPPGPPGA----GDRGGGGPGGGGPGGGSAG 56
+D + G P P GPP PAG G G G GPPG+ G RG GP G G G
Sbjct: 793 NDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQG 852
Query: 57 GPSQPPGGGGPG 68
QP G PG
Sbjct: 853 PDGQPGVKGEPG 864
Score = 43.5 bits (101), Expect = 7e-04
Identities = 29/69 (42%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 3 DYSTGGP--PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPS 59
D GP PPG P G G G AG PG GA G+RG G G GS G P
Sbjct: 1027 DKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPG 1086
Query: 60 QPPGGGGPG 68
P G PG
Sbjct: 1087 TPGPVGAPG 1095
Score = 40.4 bits (93), Expect = 0.006
Identities = 32/90 (35%), Positives = 35/90 (38%), Gaps = 23/90 (25%)
Query: 1 MSDYSTGGPPPGP-----------PPPAGGGGGAGGAGGGPPPGPPG-AGDRG------- 41
+ D GPP GP P P G G AG G G PG G+RG
Sbjct: 953 VGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGP 1012
Query: 42 GGGPGGGGPGGGSAG----GPSQPPGGGGP 67
G PG GP G + GP PPG GP
Sbjct: 1013 AGTPGKVGPTGATGDKGPPGPVGPPGSNGP 1042
Score = 38.9 bits (89), Expect = 0.017
Identities = 36/103 (34%), Positives = 36/103 (34%), Gaps = 40/103 (38%)
Query: 5 STGGP-PPGPPPPAGGGGGAGGAGGGPPPGPPGA-------------------GDRGGGG 44
S G P PGP G G G G P GPPG GDRG G
Sbjct: 1081 SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG 1140
Query: 45 -------------PGGGGPGG--GSAG-----GPSQPPGGGGP 67
PG GP G GSAG GP PPG GP
Sbjct: 1141 QKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGP 1183
Score = 37.4 bits (85), Expect = 0.049
Identities = 55/187 (29%), Positives = 60/187 (32%), Gaps = 54/187 (28%)
Query: 455 GAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG-PGGPGPAG 513
G + Q P G+ NF RG Q K E L PV G G PGPAG
Sbjct: 90 GECCPVCSQTPGGGNTNFG----RGRKGQ----------KGEPGLVPVVTGIRGRPGPAG 135
Query: 514 PMGPFNP----GPFNQ----------GPPGAP--PHAGGPPPHQYPPQGWGNTYPQWQPP 557
P G P GP + G PG P P A GPP H P P
Sbjct: 136 PPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHP----------GPD 185
Query: 558 APHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAP----------APAAPPAQGEP 607
P A A D + + GPV P P PP GEP
Sbjct: 186 GLSRPFSAQMAGLDEKSGLGSQVG-LMPGSVGPVGPRGPQGLQGQQGGAGPTGPP--GEP 242
Query: 608 PQPPPTG 614
P P G
Sbjct: 243 GDPGPMG 249
>gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens]
Length = 361
Score = 79.7 bits (195), Expect = 9e-15
Identities = 82/350 (23%), Positives = 142/350 (40%), Gaps = 33/350 (9%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + K++++SG ++ IS G PER ++L G ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKKMREESGARINIS--EGNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 ISS---SMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSV 334
N + ++ + I G P + + + + ++ E G+ +P P+ S
Sbjct: 140 N-STERAITIAGIPQSIIECVKQICVVMLESPP--------------KGVTIPYRPKPSS 184
Query: 335 GVVIGRSGEMIKKIQNDAG-----VRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDL 389
VI G+ +D+ D GP A+ +
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 390 LQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFS----IPTHKCGLVIGRGGE 445
L +S P G G +G WG T S IP G +IGR G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGA 304
Query: 446 NVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
+ I Q +GA ++I+ + + D + I GS I A+ LI ++
Sbjct: 305 KINEIRQMSGAQIKIANPVEGSTD---RQVTITGSAASISLAQYLINVRL 351
Score = 70.9 bits (172), Expect = 4e-12
Identities = 62/226 (27%), Positives = 94/226 (41%), Gaps = 33/226 (14%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +KK++ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
S PP + +P +CG +IG+GG +K I +
Sbjct: 83 ISSSMTNSTAASRPPV----------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQ-IDHAKQ----LIEEKIEGPLCPVGPGPGG 508
TGA V+++ + PN + I G PQ I+ KQ ++E +G P P P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 509 PGP--AGPMGPFNPGPFNQGPPGAP------PHAGGPPPHQYPPQG 546
AG ++ G + P P GPP Y QG
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG 230
Score = 53.5 bits (127), Expect = 7e-07
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 229 GGQNGTVQEIMIPAGK-AGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIG 287
GG N T+ ++ GK G +IGK GE++K+++E +G ++ + S+ ++ + + G
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAG 63
Query: 288 DPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKK 347
+ +A M++D L E D + SR + + VP G +IG+ G IK+
Sbjct: 64 PTNAIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 348 IQNDAGVRIQFKQDD-GTGPEKIAHIMG-PPDRCEHAARIINDLLQSLRSG-----PPGP 400
I+ G ++Q D E+ I G P E +I +L+S G P P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 401 PGGPGMPPGGRGR 413
P + GG+ R
Sbjct: 183 SSSPVIFAGGQDR 195
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
+ E +P+ ++G IIGR G +IN+I+Q SG +++I+ G +R V++TG+ S+ A+
Sbjct: 285 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 344
Query: 206 MMLDDIVSRGRGG 218
+++ +S GG
Sbjct: 345 YLINVRLSSETGG 357
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ ISS + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESV 201
P ER++++ G P+S+
Sbjct: 139 PNSTERAITIAGIPQSI 155
Score = 30.0 bits (66), Expect = 7.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 326 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
++ +P +G +IGR G I +I+ +G +I+ ++ I G A +
Sbjct: 287 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 346
Query: 386 INDLLQSLRSG 396
IN L S G
Sbjct: 347 INVRLSSETGG 357
>gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens]
Length = 366
Score = 76.6 bits (187), Expect = 7e-14
Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 42/357 (11%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + K++++SG ++ IS G PER ++L G ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKKMREESGARINIS--EGNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 ISS---SMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYK----VQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-P 330
N + ++ + I G P V+Q C ++++ L + G+ +P P
Sbjct: 140 N-STERAITIAGIPQSIIECVKQICVVMLETLSQSPP--------------KGVTIPYRP 184
Query: 331 RHSVGVVIGRSGEMIKKIQNDAG-----VRIQFKQDDGTGPEKIAH-IMG-----PPDRC 379
+ S VI G+ +D+ D GP A+ I G PD
Sbjct: 185 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT 244
Query: 380 EHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRG-QGNWGPPGGEMTFSIPTHKCGL 438
+ + + G G G P +G G + E+T IP G
Sbjct: 245 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELT--IPNDLIGC 302
Query: 439 VIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
+IGR G + I Q +GA ++I+ + + D + I GS I A+ LI ++
Sbjct: 303 IIGRQGAKINEIRQMSGAQIKIANPVEGSTD---RQVTITGSAASISLAQYLINVRL 356
Score = 68.2 bits (165), Expect = 3e-11
Identities = 62/230 (26%), Positives = 93/230 (40%), Gaps = 37/230 (16%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +KK++ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
S PP + +P +CG +IG+GG +K I +
Sbjct: 83 ISSSMTNSTAASRPPV----------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQ-IDHAKQLIEEKIE--------GPLCPVGP 504
TGA V+++ + PN + I G PQ I+ KQ+ +E G P P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 505 GPGGPGP--AGPMGPFNPGPFNQGPPGAP------PHAGGPPPHQYPPQG 546
P AG ++ G + P P GPP Y QG
Sbjct: 185 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG 234
Score = 55.1 bits (131), Expect = 2e-07
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 229 GGQNGTVQEIMIPAGK-AGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIG 287
GG N T+ ++ GK G +IGK GE++K+++E +G ++ + S+ ++ + + G
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAG 63
Query: 288 DPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKK 347
+ +A M++D L E D + SR + + VP G +IG+ G IK+
Sbjct: 64 PTNAIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 348 IQNDAGVRIQFKQDD-GTGPEKIAHIMG-PPDRCEHAARIINDLLQSLRSGP-------- 397
I+ G ++Q D E+ I G P E +I +L++L P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 398 -PGPPGGPGMPPGGRGR 413
P P P + GG+ R
Sbjct: 183 RPKPSSSPVIFAGGQDR 199
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
+ E +P+ ++G IIGR G +IN+I+Q SG +++I+ G +R V++TG+ S+ A+
Sbjct: 290 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 349
Query: 206 MMLDDIVSRGRGG 218
+++ +S GG
Sbjct: 350 YLINVRLSSETGG 362
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ ISS + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESV 201
P ER++++ G P+S+
Sbjct: 139 PNSTERAITIAGIPQSI 155
Score = 30.0 bits (66), Expect = 7.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 326 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
++ +P +G +IGR G I +I+ +G +I+ ++ I G A +
Sbjct: 292 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 351
Query: 386 INDLLQSLRSG 396
IN L S G
Sbjct: 352 INVRLSSETGG 362
>gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens]
Length = 345
Score = 76.6 bits (187), Expect = 7e-14
Identities = 77/329 (23%), Positives = 136/329 (41%), Gaps = 81/329 (24%)
Query: 138 HPPPRTSMTEEYRVPDG---------------MVGLIIGRGGEQINKIQQDSGCKVQISP 182
HP P+ E +V +G VG IIG+ GE + K++++SG ++ IS
Sbjct: 24 HPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS- 82
Query: 183 DSGGLPERSVSLTGAPESVQKAKMML-----DDIVSRGRGGPPGQFHDNANGGQNGTVQE 237
G PER V++TG +++ KA M+ +DI++ P +
Sbjct: 83 -EGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATS--------KPPVTLR 133
Query: 238 IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACE 297
+++PA + G +IGKGG IK+++E G ++ + D N + ++ + I G P + Q +
Sbjct: 134 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN-STERAVTISGTPDAIIQCVK 192
Query: 298 MVMDILRE--RDQGGF-------------------------------GDR-----NEYGS 319
+ ++ E QG + G++ +E
Sbjct: 193 QICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQ 252
Query: 320 RIGG---GID---------VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE 367
+ G G+D + +P +G +IGR G I +I+ +G +I+ E
Sbjct: 253 NLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSE 312
Query: 368 KIAHIMGPPDRCEHAARIINDLLQSLRSG 396
+ I G P A +IN L S +G
Sbjct: 313 RQITITGTPANISLAQYLINARLTSEVTG 341
Score = 68.9 bits (167), Expect = 2e-11
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 39/197 (19%)
Query: 300 MDILRERDQGGFGDRNEYGSRIG-GGIDVPVPRH------SVGVVIGRSGEMIKKIQNDA 352
+ L Q FG R E S++ GG++V + VG +IG+ GE +KK++ ++
Sbjct: 18 LSTLSHHPQPQFGRRME--SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREES 75
Query: 353 GVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARII-----NDLLQSLRSGPPGPPGGPGMP 407
G RI + G PE+I I GP D A +I D++ S+ + P
Sbjct: 76 GARINISE--GNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPAT-------- 125
Query: 408 PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPN 467
P + +P +CG +IG+GG +K I + TGA V+++ + PN
Sbjct: 126 -------------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 172
Query: 468 GDPNFKLFIIRGSPQQI 484
+ I G+P I
Sbjct: 173 STE--RAVTISGTPDAI 187
Score = 67.0 bits (162), Expect = 6e-11
Identities = 75/314 (23%), Positives = 126/314 (40%), Gaps = 45/314 (14%)
Query: 227 ANGGQNGTVQEIMIPAGK-AGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRI 285
+ GG N T+ ++ GK G +IGK GET+K+++E +G ++ + S+ ++ + I
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTI 93
Query: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 345
G + +A M+ E D + S+ + + VP G +IG+ G I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKI 152
Query: 346 KKIQNDAGVRIQFKQDD-GTGPEKIAHIMGPPDRCEHAARII------------------ 386
K+I+ G ++Q D E+ I G PD + I
Sbjct: 153 KEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH 212
Query: 387 ---NDLLQSLRSGPPGPPGGPGMP--PGGRG-----------RGRGQG-NWGPPGGEMTF 429
L Q P PP G P PG + G+ G + PP
Sbjct: 213 PDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHEL 272
Query: 430 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ 489
+IP G +IGR G + I Q +GA ++I+ + + + I G+P I A+
Sbjct: 273 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSE---RQITITGTPANISLAQY 329
Query: 490 LIEEKIEGPLCPVG 503
LI ++ + +G
Sbjct: 330 LINARLTSEVTGMG 343
Score = 58.5 bits (140), Expect = 2e-08
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
Query: 105 FGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGG 164
F G+K L + E++ L Q + + PP + T E +P+ ++G IIGR G
Sbjct: 238 FPGEKLPLHSSE--EAQNLMGQSSGLDAS------PPAS--THELTIPNDLIGCIIGRQG 287
Query: 165 EQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLD 209
+IN+I+Q SG +++I+ + G ER +++TG P ++ A+ +++
Sbjct: 288 TKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 332
>gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens]
Length = 362
Score = 75.9 bits (185), Expect = 1e-13
Identities = 84/353 (23%), Positives = 147/353 (41%), Gaps = 38/353 (10%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + K++++SG ++ IS G PER ++L G ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKKMREESGARINIS--EGNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 ISS---SMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSV 334
N + ++ + I G P + + + + ++ E G+ +P P+ S
Sbjct: 140 N-STERAITIAGIPQSIIECVKQICVVMLESPP--------------KGVTIPYRPKPSS 184
Query: 335 GVVIGRSGEMIKKIQNDAG-----VRIQFKQDDGTGPEKIAH-IMG-----PPDRCEHAA 383
VI G+ +D+ D GP A+ I G PD +
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRG-QGNWGPPGGEMTFSIPTHKCGLVIGR 442
+ + G G G P +G G + E+T IP G +IGR
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELT--IPNDLIGCIIGR 302
Query: 443 GGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
G + I Q +GA ++I+ + + D + I GS I A+ LI ++
Sbjct: 303 QGAKINEIRQMSGAQIKIANPVEGSTD---RQVTITGSAASISLAQYLINVRL 352
Score = 70.9 bits (172), Expect = 4e-12
Identities = 62/226 (27%), Positives = 94/226 (41%), Gaps = 33/226 (14%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +KK++ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
S PP + +P +CG +IG+GG +K I +
Sbjct: 83 ISSSMTNSTAASRPPV----------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQ-IDHAKQ----LIEEKIEGPLCPVGPGPGG 508
TGA V+++ + PN + I G PQ I+ KQ ++E +G P P P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 509 PGP--AGPMGPFNPGPFNQGPPGAP------PHAGGPPPHQYPPQG 546
AG ++ G + P P GPP Y QG
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG 230
Score = 53.5 bits (127), Expect = 7e-07
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 229 GGQNGTVQEIMIPAGK-AGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIG 287
GG N T+ ++ GK G +IGK GE++K+++E +G ++ + S+ ++ + + G
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAG 63
Query: 288 DPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKK 347
+ +A M++D L E D + SR + + VP G +IG+ G IK+
Sbjct: 64 PTNAIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 348 IQNDAGVRIQFKQDD-GTGPEKIAHIMG-PPDRCEHAARIINDLLQSLRSG-----PPGP 400
I+ G ++Q D E+ I G P E +I +L+S G P P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 401 PGGPGMPPGGRGR 413
P + GG+ R
Sbjct: 183 SSSPVIFAGGQDR 195
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
+ E +P+ ++G IIGR G +IN+I+Q SG +++I+ G +R V++TG+ S+ A+
Sbjct: 286 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 345
Query: 206 MMLDDIVSRGRGG 218
+++ +S GG
Sbjct: 346 YLINVRLSSETGG 358
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ ISS + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESV 201
P ER++++ G P+S+
Sbjct: 139 PNSTERAITIAGIPQSI 155
Score = 30.0 bits (66), Expect = 7.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 326 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
++ +P +G +IGR G I +I+ +G +I+ ++ I G A +
Sbjct: 288 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 347
Query: 386 INDLLQSLRSG 396
IN L S G
Sbjct: 348 INVRLSSETGG 358
>gi|56118219 insulin-like growth factor 2 mRNA binding protein 2
isoform b [Homo sapiens]
Length = 556
Score = 75.5 bits (184), Expect = 2e-13
Identities = 88/391 (22%), Positives = 154/391 (39%), Gaps = 75/391 (19%)
Query: 113 EDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYR------VPDGMVGLIIGRGGEQ 166
E+ P + A +GD S + G H P TS + VP VG IIG+ G
Sbjct: 158 EEVSSPSPPQRAQRGDHSSREQG--HAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLT 215
Query: 167 INKIQQDSGCKVQIS-PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHD 225
I I + + +V I ++ G E+ V++ PE +A M+ +I+ + D
Sbjct: 216 IKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQKEA--------D 267
Query: 226 NANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRI 285
+ ++ I+ G G +IGK G +K+++ G K+ + Q+ ++ P R
Sbjct: 268 ETKLAEEIPLK-ILAHNGLVGRLIGKEGRNLKKIEHETGTKITI--SSLQDLSIYNPERT 324
Query: 286 IGDPYKVQQACEMVMDILR------ERDQGGFGDRNEYGSRIGGG--------------- 324
I V+ ++I++ E D + Y S +
Sbjct: 325 ITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQ 384
Query: 325 --IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTG-PEKIAHIMGPPD-RCE 380
+++ +P +VG +IG+ G IK++ AG I+ +G E++ I GPP+ + +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 381 HAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFS----IPTHKC 436
RI L + N+ P E+ +P+
Sbjct: 445 AQGRIFGKLKEE--------------------------NFFNPKEEVKLEAHIRVPSSTA 478
Query: 437 GLVIGRGGENVKAINQQTGAFVEISRQLPPN 467
G VIG+GG+ V + T A V + R P+
Sbjct: 479 GRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 509
Score = 71.2 bits (173), Expect = 3e-12
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 133 QLGPI---HPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSG-GLP 188
Q GP H P + + +P VG IIG+ G I ++ + +G ++I+P G +
Sbjct: 371 QFGPFPHHHSYPEQEIVNLF-IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS 429
Query: 189 ERSVSLTGAPESVQKAK-MMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGL 247
ER V +TG PE+ KA+ + + P + A+ I +P+ AG
Sbjct: 430 ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAH---------IRVPSSTAGR 480
Query: 248 VIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERD 307
VIGKGG+T+ +LQ ++I+ +D + + N + +RIIG + Q A + +I+++
Sbjct: 481 VIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVK 540
Query: 308 Q 308
Q
Sbjct: 541 Q 541
Score = 63.9 bits (154), Expect = 5e-10
Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 36/277 (12%)
Query: 153 DGMVGLIIGRGGEQINKIQQDSGCKVQIS---PDSGGLPERSVSLTGAPESVQKAKMML- 208
+G+VG +IG+ G + KI+ ++G K+ IS S PER++++ G E+ A++ +
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEIM 342
Query: 209 ---------DDIVSRGRGG------PPGQF----HDNANGGQNGTVQEIMIPAGKAGLVI 249
D + G P QF H ++ Q + + IP G +I
Sbjct: 343 KKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQE--IVNLFIPTQAVGAII 400
Query: 250 GKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQ-QACEMVMDILRERDQ 308
GK G IKQL AG + + ++ +V + + II P + Q +A + L+E +
Sbjct: 401 GKKGAHIKQLARFAGASIKIAP--AEGPDVSERMVIITGPPEAQFKAQGRIFGKLKE--E 456
Query: 309 GGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQN--DAGVRIQFKQDDGTGP 366
F + E + + VP + G VIG+ G+ + ++QN A V + Q
Sbjct: 457 NFFNPKEE----VKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENE 512
Query: 367 EKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGG 403
E I I+G + A R I +++Q ++ P G
Sbjct: 513 EVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQG 549
Score = 33.1 bits (74), Expect = 0.92
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 401 PGGPGMPPGGRGRGRGQGNWGPPGGE---------MTFSIPTHKCGLVIGRGGENVKAIN 451
P P G R QG+ PGG + +PT G +IG+ G +K I
Sbjct: 163 PSPPQRAQRGDHSSREQGH--APGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNIT 220
Query: 452 QQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE 493
+QT + V+I R+ N K I +P+ A ++I E
Sbjct: 221 KQTQSRVDIHRK--ENSGAAEKPVTIHATPEGTSEACRMILE 260
>gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens]
Length = 335
Score = 75.5 bits (184), Expect = 2e-13
Identities = 84/346 (24%), Positives = 146/346 (42%), Gaps = 51/346 (14%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + K++++SG ++ IS G PER ++L G ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKKMREESGARINIS--EGNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 ISS---SMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYK----VQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-P 330
N + ++ + I G P V+Q C ++++ L + G+ +P P
Sbjct: 140 N-STERAITIAGIPQSIIECVKQICVVMLETLSQSPP--------------KGVTIPYRP 184
Query: 331 RHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLL 390
+ S VI G+ IQ + Q D T ++A +
Sbjct: 185 KPSSSPVIFAGGQAY-TIQGQYAI----PQPDLTKLHQLA---------------MQQSH 224
Query: 391 QSLRSGPPGPPGGPGMPPGGRGRGRG-QGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKA 449
+ G G G P +G G + E+T IP G +IGR G +
Sbjct: 225 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELT--IPNDLIGCIIGRQGAKINE 282
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
I Q +GA ++I+ + + D + I GS I A+ LI ++
Sbjct: 283 IRQMSGAQIKIANPVEGSTD---RQVTITGSAASISLAQYLINVRL 325
Score = 66.6 bits (161), Expect = 7e-11
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +KK++ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
S PP + +P +CG +IG+GG +K I +
Sbjct: 83 ISSSMTNSTAASRPPV----------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQ-IDHAKQLIEEKIEGPLCPVGPGPGGPGPA 512
TGA V+++ + PN + I G PQ I+ KQ+ +E + P P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGIPQSIIECVKQICVVMLE----TLSQSP----PK 176
Query: 513 GPMGPFNPGP 522
G P+ P P
Sbjct: 177 GVTIPYRPKP 186
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
+ E +P+ ++G IIGR G +IN+I+Q SG +++I+ G +R V++TG+ S+ A+
Sbjct: 259 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 318
Query: 206 MMLDDIVSRGRGG 218
+++ +S GG
Sbjct: 319 YLINVRLSSETGG 331
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ ISS + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESV 201
P ER++++ G P+S+
Sbjct: 139 PNSTERAITIAGIPQSI 155
Score = 30.0 bits (66), Expect = 7.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 326 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
++ +P +G +IGR G I +I+ +G +I+ ++ I G A +
Sbjct: 261 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 320
Query: 386 INDLLQSLRSG 396
IN L S G
Sbjct: 321 INVRLSSETGG 331
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 75.5 bits (184), Expect = 2e-13
Identities = 91/325 (28%), Positives = 105/325 (32%), Gaps = 98/325 (30%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTG 455
GPP PPG P PP P GG N+ G
Sbjct: 49 GPPPPPGKPQGPP-------------PQGG-------------------------NKPQG 70
Query: 456 AFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPM 515
PP G P +G P Q D K P P G P GP P G
Sbjct: 71 P--------PPPGKP-------QGPPPQGD--------KSRSPRSPPGK-PQGPPPQGGN 106
Query: 516 GPFNPGPFNQGPPGAPPHAG----GPP----PHQYPPQGWGNTYPQWQPPAPHDPSKAAA 567
P P P P G PP G GPP P PPQG + P+ P P P
Sbjct: 107 QPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 166
Query: 568 AAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQ-PPPTGQSDYTKAWEEYY 626
QP GP P P PP G+ PQ PPP G+ +
Sbjct: 167 -----------------NQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKS 209
Query: 627 KKIGQQPQQPGAPPQQDYTKAW---EEYYKKQAQVATGGG--PGAPPGSQPDYSAAWAEY 681
+ P +P PP Q + K Q GG G PP +P A
Sbjct: 210 RSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGS 269
Query: 682 YRQQAAYYGQTPGPGGPQPPPTQQG 706
Q A ++P PG PQ PP Q+G
Sbjct: 270 KSQSA----RSP-PGKPQGPPQQEG 289
Score = 74.7 bits (182), Expect = 3e-13
Identities = 76/245 (31%), Positives = 87/245 (35%), Gaps = 88/245 (35%)
Query: 501 PVGPGP-GGPGPAGPMGPFNP-GPFNQG------------PPGAPPHAG----GPPPHQY 542
P GP P GG P GP P P GP QG P G PP G GPPP
Sbjct: 57 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPG 116
Query: 543 PPQG---WGNTYPQWQPPA--PHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPA 597
PQG G PQ PP P P + P + PPG GP P
Sbjct: 117 KPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRS------------PPGKPQGPPPQ 164
Query: 598 -----PAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQP-------GAPPQQDYT 645
PP G+P PPP G G++PQ P G PPQ D +
Sbjct: 165 GGNQPQGPPPPPGKPQGPPPQG---------------GKKPQGPPPPGKPQGPPPQGDKS 209
Query: 646 KAWEEYYKKQAQVATGGGPGAPP--GSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPT 703
++ +Q G G PP G+QP G P PG PQ PP
Sbjct: 210 RS--------SQSPPGKPQGPPPQGGNQPQ----------------GPPPPPGKPQGPPP 245
Query: 704 QQGQQ 708
Q G +
Sbjct: 246 QGGNK 250
Score = 70.5 bits (171), Expect = 5e-12
Identities = 68/224 (30%), Positives = 79/224 (35%), Gaps = 43/224 (19%)
Query: 502 VGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAG----GPP----PHQYPPQGWGNTYPQ 553
+ P GP P G P P P P G PP G GPP P PPQG + P+
Sbjct: 32 IAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR 91
Query: 554 WQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAP----APAAPPAQGEPPQ 609
P P P P PPG GP P P PP G+P
Sbjct: 92 SPPGKPQGP--PPQGGNQPQGP---------PPPPGKPQGPPPQGGNRPQGPPPPGKPQG 140
Query: 610 PPPTGQSDYTKAW-----EEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGP 664
PPP G + + + G QPQ P PP + + K Q G
Sbjct: 141 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQ 200
Query: 665 GAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQ 708
G PP Q D S + Q+P PG PQ PP Q G Q
Sbjct: 201 GPPP--QGDKSRS------------SQSP-PGKPQGPPPQGGNQ 229
Score = 61.2 bits (147), Expect = 3e-09
Identities = 81/252 (32%), Positives = 94/252 (37%), Gaps = 66/252 (26%)
Query: 396 GPPGPPGGP-GMPPGGRGRGRGQGNWG-----PPGGEMTFSIPTHKCGLVIG---RGGEN 446
GPP PPG P G PP G R +G G PP G+ + S P G G +GG
Sbjct: 110 GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRS-PRSPPGKPQGPPPQGG-- 166
Query: 447 VKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGP 506
NQ G PP G P +G P Q +K +GP P P
Sbjct: 167 ----NQPQGP-------PPPPGKP-------QGPPPQGG-------KKPQGP--PPPGKP 199
Query: 507 GGPGPAGPMGPFNPGPFNQGPPGAPPHAG----GPPPHQYPPQG---WGNTYPQWQPPA- 558
GP P G + P + P G PP G GPPP PQG G PQ PP
Sbjct: 200 QGPPPQGDKSRSSQSPPGK-PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 258
Query: 559 -PHDP-----SKAAAAAADPNAAWAA--YYSHYYQQPPGPVPGPAPAPAAPPA------- 603
P P SK+ +A + P + Q PP P G P APPA
Sbjct: 259 KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPP 318
Query: 604 ---QGEPPQPPP 612
QG P PP
Sbjct: 319 RPPQGGRPSRPP 330
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 8 GPPPGP-----PPPAGGGGGAGGAGGGPPPGPPGAGDRG------GGGPGGGGP-GGGSA 55
GPPP P PPP GG G G P GPP GD+ G P G P GG
Sbjct: 49 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 108
Query: 56 GGPSQPPG 63
GP PPG
Sbjct: 109 QGPPPPPG 116
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 8 GPPPGP-----PPPAGGGGGAGGAGGGPPPGPPGAGDRG------GGGPGGGGP-GGGSA 55
GPPP P PPP GG G G P GPP GD+ G P G P GG
Sbjct: 110 GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 169
Query: 56 GGPSQPPG 63
GP PPG
Sbjct: 170 QGPPPPPG 177
Score = 47.4 bits (111), Expect = 5e-05
Identities = 31/74 (41%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 7 GGPPPGPP--PPAGGGGGAGGAGGGP--PPGPP---GAGDRGGGGPGGGGPG------GG 53
G PPPG P PPA GG + A P P GPP G +G P GG P G
Sbjct: 253 GPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 312
Query: 54 SAGGPSQPPGGGGP 67
GP +PP GG P
Sbjct: 313 QPQGPPRPPQGGRP 326
Score = 47.0 bits (110), Expect = 6e-05
Identities = 31/73 (42%), Positives = 32/73 (43%), Gaps = 16/73 (21%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGG----GPPP-----GPPGAGDRG------GGGPGGGGP- 50
G P GPPPP G G GG GPPP GPP GD+ G P G P
Sbjct: 166 GNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQ 225
Query: 51 GGGSAGGPSQPPG 63
GG GP PPG
Sbjct: 226 GGNQPQGPPPPPG 238
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/77 (37%), Positives = 29/77 (37%), Gaps = 16/77 (20%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGG-------GPGGGSAGGPS 59
G P GPPPP G G GG P GPP G G GG P G G P
Sbjct: 227 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQ 286
Query: 60 Q---------PPGGGGP 67
Q PP GG P
Sbjct: 287 QEGNNPQGPPPPAGGNP 303
Score = 45.8 bits (107), Expect = 1e-04
Identities = 43/130 (33%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 2 SDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPP-GAGDRGGGGPGGGGPGGGSAGGPSQ 60
S S G P GPPP GG G PPPG P G +GG P G P G P
Sbjct: 211 SSQSPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP----PGKPQG 262
Query: 61 PPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNN---STPDFGFGGQKRQLEDGDQ 117
PP GG Q AR K G NN P G Q+ Q Q
Sbjct: 263 PPAQGG---------SKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 313
Query: 118 PESKKLASQG 127
P+ QG
Sbjct: 314 PQGPPRPPQG 323
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 7 GGPPPGP---PPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
G PPPG PPP G + + G P GPP +GG P G P G GP PP
Sbjct: 70 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP---PQGGNQPQGPPPPPGKPQGP--PPQ 124
Query: 64 GG 65
GG
Sbjct: 125 GG 126
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/62 (41%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 7 GGPPPGP---PPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
G PPPG PPP G + + G P GPP +GG P G P G GP PP
Sbjct: 131 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP---PQGGNQPQGPPPPPGKPQGP--PPQ 185
Query: 64 GG 65
GG
Sbjct: 186 GG 187
Score = 40.8 bits (94), Expect = 0.004
Identities = 26/60 (43%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 2 SDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPP-GAGDRGGGGPGGGGPGGGSAGGPSQ 60
S S G P GPPP GG G PPPG P G +GG P G P G G P Q
Sbjct: 89 SPRSPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQ 144
Score = 40.0 bits (92), Expect = 0.007
Identities = 26/60 (43%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 2 SDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPG-PPGAGDRGGGGPGGGGPGGGSAGGPSQ 60
S S G P GPPP GG G PPPG P G +GG P G P G G P Q
Sbjct: 150 SPRSPPGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ 205
Score = 36.6 bits (83), Expect = 0.083
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPP-GAGDRGGGGPGGGGPGGGSAGGPSQ 60
G P GP P GG G PPPG P G +GG P G P G G P Q
Sbjct: 34 GNPQGPSPQ----GGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 83
>gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens]
Length = 331
Score = 74.7 bits (182), Expect = 3e-13
Identities = 81/342 (23%), Positives = 143/342 (41%), Gaps = 47/342 (13%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + K++++SG ++ IS G PER ++L G ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKKMREESGARINIS--EGNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 ISS---SMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSV 334
N + ++ + I G P + + + + ++ E G+ +P P+ S
Sbjct: 140 N-STERAITIAGIPQSIIECVKQICVVMLESPP--------------KGVTIPYRPKPSS 184
Query: 335 GVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLR 394
VI G+ IQ + Q D T ++A + +
Sbjct: 185 SPVIFAGGQAY-TIQGQYAI----PQPDLTKLHQLA---------------MQQSHFPMT 224
Query: 395 SGPPGPPGGPGMPPGGRGRGRG-QGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
G G G P +G G + E+T IP G +IGR G + I Q
Sbjct: 225 HGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELT--IPNDLIGCIIGRQGAKINEIRQM 282
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
+GA ++I+ + + D + I GS I A+ LI ++
Sbjct: 283 SGAQIKIANPVEGSTD---RQVTITGSAASISLAQYLINVRL 321
Score = 69.7 bits (169), Expect = 9e-12
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +KK++ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
S PP + +P +CG +IG+GG +K I +
Sbjct: 83 ISSSMTNSTAASRPPV----------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQ-IDHAKQLIEEKIEGPLCPVGPGPGGPGPA 512
TGA V+++ + PN + I G PQ I+ KQ+ +E P P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGIPQSIIECVKQICVVMLESP------------PK 172
Query: 513 GPMGPFNPGP 522
G P+ P P
Sbjct: 173 GVTIPYRPKP 182
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
+ E +P+ ++G IIGR G +IN+I+Q SG +++I+ G +R V++TG+ S+ A+
Sbjct: 255 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 314
Query: 206 MMLDDIVSRGRGG 218
+++ +S GG
Sbjct: 315 YLINVRLSSETGG 327
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ ISS + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESV 201
P ER++++ G P+S+
Sbjct: 139 PNSTERAITIAGIPQSI 155
Score = 30.0 bits (66), Expect = 7.7
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 326 DVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
++ +P +G +IGR G I +I+ +G +I+ ++ I G A +
Sbjct: 257 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 316
Query: 386 INDLLQSLRSG 396
IN L S G
Sbjct: 317 INVRLSSETGG 327
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 73.2 bits (178), Expect = 8e-13
Identities = 101/355 (28%), Positives = 121/355 (34%), Gaps = 91/355 (25%)
Query: 396 GPPGPPGGPGMP-----PGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGE 445
GPPGP G PG+P PG GR +G GPPG GE F++P G
Sbjct: 710 GPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALP----------GPP 759
Query: 446 NVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG 505
+ GA L P GD RG P + + + GP VGP
Sbjct: 760 GPPGLPGFKGA-------LGPKGD--------RGFPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 506 PGGPGPAGPMG------------PFNPGPFNQ----------GPPGAPP-HAGGPPPHQY 542
G PGP GP G P PGP Q G PG P GPP +
Sbjct: 805 -GQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPP 602
P G P P +P P KA A+ PPGP PGP P
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMG-----PPGP-PGPLGIPGRSG 917
Query: 603 A---------QGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYK 653
QG+P P PTG+ K +P PG P D
Sbjct: 918 VPGLKGDDGLQGQPGLPGPTGE-----------KGSKGEPGLPGPPGPMD-----PNLLG 961
Query: 654 KQAQVATGGGPGAPPGSQP-DYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQ 707
+ + G PG P S P Y + + + PGP GP+ P GQ
Sbjct: 962 SKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQ 1016
Score = 65.9 bits (159), Expect = 1e-10
Identities = 190/754 (25%), Positives = 243/754 (32%), Gaps = 180/754 (23%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGI 69
PGPP P G G G G PG PG G G GP G G+ G P G PG+
Sbjct: 83 PGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGL 142
Query: 70 RKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDS 129
+ + + G+ + + +S P G K P + L
Sbjct: 143 QGPPGPPGIPGMK-------GEPGSIIMSSLP-----GPKGNPGYPGPPGIQGLPGP-TG 189
Query: 130 ISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE 189
I +GP PP P G GL +G +N Q G K + G P
Sbjct: 190 IPGPIGPPGPPGLMG-------PPGPPGLPGPKGNMGLN-FQGPKGEKGEQGLQ--GPP- 238
Query: 190 RSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVI 249
G P + + K +D +G G PG D G G I P G G
Sbjct: 239 ------GPPGQISEQKRPIDVEFQKGDQGLPG---DRGPPGPPG----IRGPPGPPGGEK 285
Query: 250 GKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDP-YKVQQACEMVMDILRERDQ 308
G+ GE Q G + +DG +N P + GDP Y + R+ ++
Sbjct: 286 GEKGE-----QGEPGKRGKPGKDG-ENGQPGIP-GLPGDPGYPGEPG--------RDGEK 330
Query: 309 GGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEM-IKKIQNDAGVRIQFKQDDGTGPE 367
G GD G + +PR G+ IG G + + + + G R
Sbjct: 331 GQKGDTGPPGPP-----GLVIPRPGTGITIGEKGNIGLPGLPGEKGER------------ 373
Query: 368 KIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPG----GPGMPPGGRGRGRGQGNWGPP 423
I GPP G PGPPG GP PPG G +G+ GPP
Sbjct: 374 GFPGIQGPP-------------------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPP 414
Query: 424 GGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSP-- 481
G SIP GL G + G + S ++ G P GSP
Sbjct: 415 G----ISIPGPP-GLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPP-----GSPGD 464
Query: 482 -----------QQIDHAKQLIEEKIEGPLCPVGPG-PGGPGPAGPMG-PFNPGPFNQ--- 525
+ D I I GP P PG PG PGP G +G P G Q
Sbjct: 465 KGLQGEQGVKGDKGDTCFNCIGTGISGP--PGQPGLPGLPGPPGSLGFPGQKGEKGQAGA 522
Query: 526 -GPPGAPPHAGGPPPHQYP------------PQGWGNTYPQWQPPAPHDPSKAAAAAADP 572
GP G P G P +P P G+ P AP P D
Sbjct: 523 TGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDG 582
Query: 573 NAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGE--PPQPP-------------PTGQSD 617
PG +PGP P +GE PP P P G
Sbjct: 583 L--------------PG-LPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGP 627
Query: 618 YTKAWEEYYKKIGQQPQQPGAP-----PQQDYTKAWEEYYK----KQAQVATGGGPGAPP 668
E+ + + P QPG P P Q T+ + + V G PG P
Sbjct: 628 PGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLP- 686
Query: 669 GSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPP 702
QP G PGP GP+ P
Sbjct: 687 -GQPGLPGIPGSKGEPGIPGIG-LPGPPGPKGFP 718
Score = 62.4 bits (150), Expect = 1e-09
Identities = 205/819 (25%), Positives = 262/819 (31%), Gaps = 228/819 (27%)
Query: 10 PPGPPPPAGGGGGAGGAGGGP-----------PPGPPGA--------------------G 38
PPGPP G G G GP PPGPPG G
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPG 264
Query: 39 DRGGGGPGG-----GGPGG--GSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGD 91
DRG GP G G PGG G G +P G PG K G +
Sbjct: 265 DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPG------------------KDGEN 306
Query: 92 AATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRV 151
+ D G+ G+ + DG++ + G G + P P T +T +
Sbjct: 307 GQPGIPGLPGDPGYPGEPGR--DGEKGQKGDTGPPGPP-----GLVIPRPGTGITIGEKG 359
Query: 152 PDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDI 211
G+ GL +G IQ G G P +V P +
Sbjct: 360 NIGLPGLPGEKGERGFPGIQGPPGLP--------GPPGAAVMGPPGPPGFPGERGQ---- 407
Query: 212 VSRGRGGPPGQFHDNANG--GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIL 269
+G GPPG G GQ G + P G AG I E +
Sbjct: 408 --KGDEGPPGISIPGPPGLDGQPGA-PGLPGPPGPAGPHIPPSDEICEPGPP-------- 456
Query: 270 IQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSR-IGGGIDVP 328
G + DK L + +QG GD+ + IG GI P
Sbjct: 457 ---GPPGSPGDKGL---------------------QGEQGVKGDKGDTCFNCIGTGISGP 492
Query: 329 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDR--CEHAARII 386
+ + + G G + G + + Q TGP+ + I G P +
Sbjct: 493 PGQPGLPGLPGPPGSL-----GFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEP 547
Query: 387 NDLL-------QSLRSGPPGPPGGPGMP-----------PGGRGRGRG---QGNWGPPGG 425
D+L G PG PG PG+P PG +G G +G GPPG
Sbjct: 548 GDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGN 607
Query: 426 EMTFSIPTH----------KCGLVIGRGGENVKAINQQTGAFVEISRQLP-PNGDPNFKL 474
+P + G V +G + V Q G +P P GDP +
Sbjct: 608 PGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPG--------IPGPKGDPG-QT 658
Query: 475 FIIRGSPQQIDHAKQLIEEKIEG-PLCPVGPG-PGGPGPAGPMG------PFNPGPFN-- 524
G P + + + + G P P PG PG PG G G P PGP
Sbjct: 659 ITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFP 718
Query: 525 --QGPPGAPPHAG-----GPP-PHQYP-PQGWGNTYPQWQPPAPHDPSKAAAAAADPNAA 575
GPPGAP G GPP P +P P+G P + P P P A
Sbjct: 719 GIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG----EPGFALPGPPGPPGLPGF----KGA 770
Query: 576 WAAYYSHYYQQPPGP--------VPGP--------APAPAAPP------AQGEPPQPP-- 611
+ PPGP +PGP P P PP QG PP PP
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQG-PPGPPGI 829
Query: 612 --PTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPG 669
P GQ I + PG PP D E + + GP PPG
Sbjct: 830 PGPIGQPG--------LHGIPGEKGDPG-PPGLDVPGPPGE--RGSPGIPGAPGPIGPPG 878
Query: 670 SQPDYSAAWAEYYRQQAAYYGQ--TPGPGGPQPPPTQQG 706
S A A + G PGP GP P + G
Sbjct: 879 SPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSG 917
Score = 60.5 bits (145), Expect = 5e-09
Identities = 101/346 (29%), Positives = 123/346 (35%), Gaps = 55/346 (15%)
Query: 395 SGPPGPPGGPGMPPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGEN--- 446
SGPPG PG PG PG G G G GPPG G+ P + G G N
Sbjct: 1136 SGPPGNPGLPG-EPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP 1194
Query: 447 --VKAINQQTG----AFVEISRQLP-PNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGP 498
+ ++ Q G + + LP P G+P F F ++G P +E +G
Sbjct: 1195 PGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGP-KGN 1253
Query: 499 LCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAG-----GPPPHQYPPQGWGNTYPQ 553
P GP PG PGP G G PGP +GPPG P + G G P P G Q
Sbjct: 1254 PGPQGP-PGRPGPTGFQG--LPGP--EGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQ 1308
Query: 554 WQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPP-- 611
P +P + + + P VPG A P P PP PP
Sbjct: 1309 GPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSA-GPEGEPGLIGPPGPPGL 1367
Query: 612 --PTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAP-P 668
P+GQS K + I QP G P Q Q G PG P
Sbjct: 1368 PGPSGQSIIIKG-DAGPPGIPGQPGLKGLPGPQG----------PQGLPGPTGPPGDPGR 1416
Query: 669 GSQPDYSAAWAEYYRQQAAYYGQ--------TPGPGGPQPPPTQQG 706
P + A + GQ PGP G Q PP G
Sbjct: 1417 NGLPGFDGAGGR--KGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1460
Score = 59.7 bits (143), Expect = 9e-09
Identities = 176/686 (25%), Positives = 216/686 (31%), Gaps = 172/686 (25%)
Query: 10 PPGPPPPAGGGGGAG--------GAGGGPP-PGPPGAGDRGGGGPGG-----GGPGGGSA 55
PPGPP G G G G G P PGPPG +G GP G G PG
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGI--QGLPGPTGIPGPIGPPGPPGL 202
Query: 56 GGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDG 115
GP PPG GP K Q + + G G G Q+ +
Sbjct: 203 MGPPGPPGLPGP---KGNMGLNFQGPKGEKGEQGLQ------------GPPGPPGQISEQ 247
Query: 116 DQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSG 175
+P + + GP PP R P G G G GEQ ++
Sbjct: 248 KRPIDVEFQKGDQGLPGDRGPPGPP-------GIRGPPGPPGGEKGEKGEQGEPGKRGKP 300
Query: 176 CK--VQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNG 233
K P GLP G P GR G GQ D G G
Sbjct: 301 GKDGENGQPGIPGLP-GDPGYPGEP----------------GRDGEKGQKGDTGPPGPPG 343
Query: 234 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPLRIIGDPYKV 292
++IP G+ IG+ G G+ + + G + + P + G P
Sbjct: 344 ----LVIPRPGTGITIGEKG--------NIGLPGLPGEKGERGFPGIQGPPGLPGPPGAA 391
Query: 293 QQACEMVMDILRERDQGGFGDRNEYGSRIGG--GID-------VPVPRHSVGVVIGRSGE 343
ER Q GD G I G G+D +P P G I S E
Sbjct: 392 VMGPPGPPGFPGERGQK--GDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDE 449
Query: 344 MI-------------KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLL 390
+ K +Q + GV K D G D C + +
Sbjct: 450 ICEPGPPGPPGSPGDKGLQGEQGV----KGDKG-------------DTCFNC-------I 485
Query: 391 QSLRSGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVK 448
+ SGPPG PG PG+ PPG G +G G G +P G+ G
Sbjct: 486 GTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLP----GIPGAPGAPGFP 541
Query: 449 AINQQTGAFVEI------SRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIE------ 496
+ G + +L G P L + G+P Q D L K E
Sbjct: 542 GSKGEPGDILTFPGMKGDKGELGSPGAPG--LPGLPGTPGQ-DGLPGLPGPKGEPGGITF 598
Query: 497 ----GPLCPVGPG-PGGPGPAGPMGPFN---PGPF----------NQGPPGAPPHAGGP- 537
GP P PG PG PG GPMGP PGP N G PG P G P
Sbjct: 599 KGERGP--PGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPG 656
Query: 538 -----PPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGP-- 590
P P G P P P + + PPGP
Sbjct: 657 QTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKG 716
Query: 591 ---VPGPAPAPAAPPAQG--EPPQPP 611
+PGP AP P G PP PP
Sbjct: 717 FPGIPGPPGAPGTPGRIGLEGPPGPP 742
Score = 58.2 bits (139), Expect = 3e-08
Identities = 79/282 (28%), Positives = 92/282 (32%), Gaps = 80/282 (28%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQ-GNWGPPG-----GEMTFSIPTHKCGLVIGRGGENVKA 449
GPPGP G PG+P GQ G GPPG G+M F P G
Sbjct: 1003 GPPGPKGNPGLP--------GQPGLIGPPGLKGTIGDMGFPGPQGV------EGPPGPSG 1048
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDH-------AKQLIEEKIEGPLCPV 502
+ Q G+ + Q GDP + G P I+ + P P
Sbjct: 1049 VPGQPGS-PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPG 1107
Query: 503 GPG-------------PGGPGPAGPMG----PFNPG-PFNQGPPGAPPHAG--GPPPHQY 542
PG PG PGP GP G P NPG P GP G H G GPP +
Sbjct: 1108 LPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKG 1167
Query: 543 PP-----------------QGWGNTYPQWQP---------PAPHDPSKAAAAAADPNAAW 576
P G+GN P P P P +
Sbjct: 1168 KPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGF 1227
Query: 577 AAYYSHYYQQPPGPVPGPAPAPAAPPA----QGEPPQPPPTG 614
+ Q PPGP P PA P QG P +P PTG
Sbjct: 1228 HGFPG--VQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTG 1267
Score = 52.4 bits (124), Expect = 1e-06
Identities = 89/340 (26%), Positives = 105/340 (30%), Gaps = 97/340 (28%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP GPPG PG+P PG +G G GPPG IP GR G V
Sbjct: 872 GPIGPPGSPGLPGKAGASGFPGTKGE---MGMMGPPGPPGPLGIP--------GRSG--V 918
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP--G 505
+ G ++G P + GP G
Sbjct: 919 PGLKGDDG---------------------LQGQP------------GLPGPTGEKGSKGE 945
Query: 506 PGGPGPAGPMGPFNPGPFNQ-GPPGAP--PHAGGPPPHQYPPQGWGNTYPQWQP--PAPH 560
PG PGP GPM P G + G PG P P GP +Q P G QP P P
Sbjct: 946 PGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPP 1005
Query: 561 DPSKAAAAAADPNAAWAAYYSHYYQQP--PGP-----VPGPAPAPAAPPAQGEPPQPPPT 613
P P PGP PGP+ P P + G P Q
Sbjct: 1006 GPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 614 GQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAP--PGS- 670
G + +P PG P + V G PG P PG+
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGI----------KGSVGDPGLPGLPGTPGAK 1115
Query: 671 -QPDYSAAWAEYYRQQAAYYGQTPGPGGPQ---PPPTQQG 706
QP + TPGP GP+ PP G
Sbjct: 1116 GQPGLPG------------FPGTPGPPGPKGISGPPGNPG 1143
Score = 47.0 bits (110), Expect = 6e-05
Identities = 95/358 (26%), Positives = 114/358 (31%), Gaps = 72/358 (20%)
Query: 365 GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGP-- 422
GP I + G P ++ S GP G PG PG PPG +G G GP
Sbjct: 147 GPPGIPGMKGEP----------GSIIMSSLPGPKGNPGYPG-PPGIQGLPGPTGIPGPIG 195
Query: 423 PGGEMTFSIPTHKCGLVIGRG--GENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGS 480
P G P GL +G G N + + G E Q PP G
Sbjct: 196 PPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKG---EQGLQGPP------------GP 240
Query: 481 PQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPH 540
P QI K+ I+ + + + G PGP G GP PGP G G G P
Sbjct: 241 PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGP--PGP-PGGEKGEKGEQGEPGKR 297
Query: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAA 600
P + N P P P DP D PPGP P P
Sbjct: 298 GKPGKDGENGQP-GIPGLPGDPGYPGEPGRDGEKGQKGDTG-----PPGPPGLVIPRPGT 351
Query: 601 PPAQGE------PPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYK- 653
GE P P G E + I P PG P +
Sbjct: 352 GITIGEKGNIGLPGLPGEKG--------ERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPG 403
Query: 654 KQAQVATGGGPG----APPG--SQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQ 705
++ Q G PG PPG QP A PGP GP PP+ +
Sbjct: 404 ERGQKGDEGPPGISIPGPPGLDGQPG------------APGLPGPPGPAGPHIPPSDE 449
Score = 45.1 bits (105), Expect = 2e-04
Identities = 28/63 (44%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGI 69
PGPP P G G G G PPG G GD G GP G G +G P QP G PG
Sbjct: 1002 PGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQ 1061
Query: 70 RKD 72
+ D
Sbjct: 1062 KGD 1064
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/76 (43%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 8 GPP-----PGPPPPAGGGGGAGGAGGGPPPGPPG-------AGDRG-GGGPGGGGPGGGS 54
GPP PG P P GGGG G G G PG AG +G G PG G PG
Sbjct: 1137 GPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPG 1196
Query: 55 AGGPSQPPGGGG-PGI 69
G S G GG PGI
Sbjct: 1197 LPGLSGQKGDGGLPGI 1212
Score = 44.7 bits (104), Expect = 3e-04
Identities = 30/69 (43%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 6 TGGPP-----PGPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGGGSAGGPS 59
T GPP GPP G G G GGG PG PG G++G G G G G P
Sbjct: 1126 TPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG 1185
Query: 60 QPPGGGGPG 68
Q PG G PG
Sbjct: 1186 Q-PGFGNPG 1193
Score = 43.5 bits (101), Expect = 7e-04
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 11/76 (14%)
Query: 8 GPP----PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
GPP PGPP G G G G PPG PG + G G G GP PPG
Sbjct: 849 GPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPG 908
Query: 64 -------GGGPGIRKD 72
G PG++ D
Sbjct: 909 PLGIPGRSGVPGLKGD 924
Score = 43.5 bits (101), Expect = 7e-04
Identities = 31/72 (43%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 10 PPGPPPPAGGG--GGAGGAGGGPPPGPPG-AGDRGGGGPGG--GGPGG----GSAGGPSQ 60
PPGPP G G G G PPG PG G +G GP G G PG G G P Q
Sbjct: 1236 PPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQ 1295
Query: 61 PPGGGGPGIRKD 72
P G PG++ D
Sbjct: 1296 PGLPGLPGLKGD 1307
Score = 42.7 bits (99), Expect = 0.001
Identities = 61/216 (28%), Positives = 78/216 (36%), Gaps = 51/216 (23%)
Query: 504 PG-PGGPGPAGPMGPFN----------PGPFN-QGP------------PGAPPHAGGPPP 539
PG PG PGP GP GP PGP +GP PG P H G P P
Sbjct: 59 PGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGP 118
Query: 540 HQYP-----------PQGWGNTYPQWQPPAPHDPS-KAAAAAADPNAAWAAYYSHYYQQP 587
P P G Q P P P K + ++ + Y P
Sbjct: 119 QGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGP 178
Query: 588 PG--------PVPGPAPAPAAPPAQGEPPQPP--PTGQSDYTKAWEEYYKKIGQQPQQ-- 635
PG +PGP P PP PP PP P + + ++ + G+Q Q
Sbjct: 179 PGIQGLPGPTGIPGPI-GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP 237
Query: 636 PGAPPQ-QDYTKAWEEYYKKQAQVATGG-GPGAPPG 669
PG P Q + + + ++K Q G GP PPG
Sbjct: 238 PGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPG 273
Score = 42.4 bits (98), Expect = 0.002
Identities = 26/57 (45%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGP 67
PG P P G G G G PPGPPG+ GP GP G GP PPG GP
Sbjct: 1216 PGLPGPKGEPGFHGFPGVQGPPGPPGS-----PGPALEGPKGNP--GPQGPPGRPGP 1265
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/75 (42%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 12 GPPPPAGGGGGAG--GAGGGPPPGPPG-AGDRGGGG-------PGGGGPGG-----GSAG 56
G P PAG G G G G PPG PG +G +G GG PG GP G G G
Sbjct: 1173 GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPG 1232
Query: 57 --GPSQPPGGGGPGI 69
GP PPG GP +
Sbjct: 1233 VQGPPGPPGSPGPAL 1247
Score = 41.2 bits (95), Expect = 0.003
Identities = 28/62 (45%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGG-PGGGGP--GGGSAGGPSQPPGGGG 66
PG P G G G G PPGP G +G G G PG GP GGG G P P G
Sbjct: 1109 PGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK 1168
Query: 67 PG 68
PG
Sbjct: 1169 PG 1170
Score = 41.2 bits (95), Expect = 0.003
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPG----GGSAGGPSQPP 62
P GPP G GG G G PG PG G +G GP G G PG G G P P
Sbjct: 1274 PEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPG 1333
Query: 63 GGGGPGIR 70
G PG++
Sbjct: 1334 VPGFPGMK 1341
Score = 40.8 bits (94), Expect = 0.004
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGP------PGAGDRGGGG----PGGGGPGG--GSAGGP 58
PG P P G G G G PPGP G++G G PG GP G G G P
Sbjct: 931 PGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDP 990
Query: 59 SQPPGGGGPGI 69
QP G PG+
Sbjct: 991 GQPGLSGQPGL 1001
Score = 40.4 bits (93), Expect = 0.006
Identities = 31/73 (42%), Positives = 32/73 (43%), Gaps = 19/73 (26%)
Query: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPPG----AGDRGGGGPGG----GGPG-GGSAGGP 58
GPP P PP GA PPGPPG G +G GP G G PG G G P
Sbjct: 380 GPPGLPGPP--------GAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAP 431
Query: 59 S--QPPGGGGPGI 69
PPG GP I
Sbjct: 432 GLPGPPGPAGPHI 444
Score = 40.4 bits (93), Expect = 0.006
Identities = 32/78 (41%), Positives = 33/78 (42%), Gaps = 19/78 (24%)
Query: 8 GPPP----GPPPPAGGGGGAGGAGG-GPP----PGPPGAGDRGG--GGPGGGGPGGG--- 53
GPP GPP P G G G G GPP PGPPG + G G PG GP G
Sbjct: 386 GPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIP 445
Query: 54 -----SAGGPSQPPGGGG 66
GP PPG G
Sbjct: 446 PSDEICEPGPPGPPGSPG 463
Score = 40.4 bits (93), Expect = 0.006
Identities = 67/247 (27%), Positives = 76/247 (30%), Gaps = 49/247 (19%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGENVKAI 450
GPPGPPG PG P G G GPPG G P GL G GG +
Sbjct: 1235 GPPGPPGSPG--PALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLP-GNGGIKGEKG 1291
Query: 451 NQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEG-PLCPVGPGPGG- 508
N + G P ++G+P + + + G P P GP G
Sbjct: 1292 NPGQPGLPGLPGLKGDQGPPG-----LQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGV 1346
Query: 509 ---------------PGPAGPMGPFNPGPF---NQGPPGAPPHAG--GPPPHQYPPQGWG 548
PGP G GP + GPPG P G G P Q P G
Sbjct: 1347 PGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPG 1406
Query: 549 NTYPQWQPPAPHDP--SKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGE 606
T P P P A DP P P P P
Sbjct: 1407 PTGPPGDPGRNGLPGFDGAGGRKGDPGL------------PGQPGTRGLDGPPGPDGLQG 1454
Query: 607 PPQPPPT 613
PP PP T
Sbjct: 1455 PPGPPGT 1461
Score = 40.0 bits (92), Expect = 0.007
Identities = 32/71 (45%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 8 GPPP-GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRG-----GGGPG-GGGPG-GGSAGGP 58
GPP GPP P G G G AG PG PG GD G G PG G PG G G P
Sbjct: 621 GPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLP 680
Query: 59 SQPPGGGGPGI 69
P G PG+
Sbjct: 681 GDPGLPGQPGL 691
Score = 38.9 bits (89), Expect = 0.017
Identities = 29/63 (46%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGG-PGGGSAGGPSQPPG-GG 65
PPG P P G G G G PPG PG G G G PG G PG G PPG G
Sbjct: 1259 PPGRPGPTGFQGLPGPEG---PPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQG 1315
Query: 66 GPG 68
PG
Sbjct: 1316 NPG 1318
Score = 38.1 bits (87), Expect = 0.028
Identities = 31/72 (43%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 3 DYSTGGPP--PGPP--PPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGSA 55
D G P PG P P G G G G PGPPG G G GP G G PG
Sbjct: 676 DVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGL 735
Query: 56 GGPSQPPGGGGP 67
GP PPG GP
Sbjct: 736 EGPPGPPGFPGP 747
Score = 38.1 bits (87), Expect = 0.028
Identities = 34/87 (39%), Positives = 35/87 (40%), Gaps = 27/87 (31%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGP----------PPGPPG-------------AGDRG-G 42
G P P PP + G G GA G P PPGPPG GD G
Sbjct: 869 GAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQ 928
Query: 43 GGPGGGGPGG--GSAGGPSQPPGGGGP 67
G PG GP G GS G P PG GP
Sbjct: 929 GQPGLPGPTGEKGSKGEPGL-PGPPGP 954
Score = 37.7 bits (86), Expect = 0.037
Identities = 29/65 (44%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGG--GSAGGPSQPPG 63
GPP PG P G G G G P GPPG R G PG G GG G G P QP
Sbjct: 1382 GPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL-PGFDGAGGRKGDPGLPGQPGT 1440
Query: 64 GGGPG 68
G G
Sbjct: 1441 RGLDG 1445
Score = 37.7 bits (86), Expect = 0.037
Identities = 27/60 (45%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 10 PPGPPPPAGGGG-----GAGGAGGGPP-PGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
P GPP G G GAGG G P PG PG RG GP PG GP PPG
Sbjct: 1407 PTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT--RGLDGP----PGPDGLQGPPGPPG 1460
Score = 37.0 bits (84), Expect = 0.063
Identities = 27/65 (41%), Positives = 28/65 (43%), Gaps = 10/65 (15%)
Query: 10 PPGPPPPAGGGGGA----GGAGGGPPPGPPGAGDRGGGGPGGGGPGG--GSAGGPSQPPG 63
PPGPP G G + G AG PG PG G PG GP G G G P P
Sbjct: 1361 PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLK----GLPGPQGPQGLPGPTGPPGDPGR 1416
Query: 64 GGGPG 68
G PG
Sbjct: 1417 NGLPG 1421
Score = 36.6 bits (83), Expect = 0.083
Identities = 29/64 (45%), Positives = 30/64 (46%), Gaps = 15/64 (23%)
Query: 6 TGGPPP-GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGG--GSAG--GPS 59
TG P P GPP P G G PPGPPG G +G G GP G G G GP
Sbjct: 188 TGIPGPIGPPGPPGLMG---------PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPP 238
Query: 60 QPPG 63
PPG
Sbjct: 239 GPPG 242
Score = 36.6 bits (83), Expect = 0.083
Identities = 27/63 (42%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQP--PGG 64
PG P G G G G PG PGA + G G PG GP G G +G P P PG
Sbjct: 1088 PGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGE 1147
Query: 65 GGP 67
GP
Sbjct: 1148 PGP 1150
Score = 36.6 bits (83), Expect = 0.083
Identities = 45/170 (26%), Positives = 53/170 (31%), Gaps = 64/170 (37%)
Query: 365 GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMP--PGGRGRGRGQGNWGP 422
GPE ++GPP ++ +GPPG PG PG+ PG +G G GP
Sbjct: 1351 GPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGP 1410
Query: 423 PGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQ 482
PG +P G GG GDP
Sbjct: 1411 PGDPGRNGLPGFD-----GAGGR---------------------KGDPGL---------- 1434
Query: 483 QIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFN-QGPPGAP 531
PG PG G GP PGP QGPPG P
Sbjct: 1435 -----------------------PGQPGTRGLDGP--PGPDGLQGPPGPP 1459
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/78 (39%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 10 PPGPPPPAG------GGGGAGGAGGGP-------PPGPPGAGDRGG--GGPGGGG-PGGG 53
PPG P P+G G G G G P P GP G G G PG G PG
Sbjct: 1364 PPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD 1423
Query: 54 SAGGPSQPPG-GGGPGIR 70
AGG PG G PG R
Sbjct: 1424 GAGGRKGDPGLPGQPGTR 1441
Score = 35.8 bits (81), Expect = 0.14
Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPG-GGGPGGGSAGGPSQPPGGGGP 67
PGP P G G G G G PG GG G PG G PG GP P G GP
Sbjct: 1396 PGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGP 1455
Score = 35.4 bits (80), Expect = 0.18
Identities = 31/79 (39%), Positives = 31/79 (39%), Gaps = 18/79 (22%)
Query: 3 DYSTGGPPP--GPPPPAGGGGGAGGAGGGP-------------PPGPPGA-GDRG-GGGP 45
D GPP GPP P GG G G G P PG PG GD G G P
Sbjct: 265 DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEP 324
Query: 46 GGGGPGGGSAG-GPSQPPG 63
G G G GP PPG
Sbjct: 325 GRDGEKGQKGDTGPPGPPG 343
Score = 35.0 bits (79), Expect = 0.24
Identities = 29/71 (40%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGGGPPPGPPG-------AGDRGGGG-PGGGGPGGGSAGG 57
GPP PG P G G G G G PPGP G AG+ G G PG G G +
Sbjct: 603 GPPGNPGLPGLPGNIGPMGPPGFG-PPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQ 661
Query: 58 PSQPPGGGGPG 68
P +P G PG
Sbjct: 662 PGKPGLPGNPG 672
Score = 34.3 bits (77), Expect = 0.41
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGA----GDRGGGGPGGGGPGG--GSAGGPSQPPGGG 65
G P P G G G +G PG PG GD+G G G G G G P P G
Sbjct: 1033 GFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPG 1092
Query: 66 GPGIR 70
PGI+
Sbjct: 1093 NPGIK 1097
Score = 33.9 bits (76), Expect = 0.54
Identities = 29/78 (37%), Positives = 32/78 (41%), Gaps = 18/78 (23%)
Query: 11 PGPPPPAGGG--GGAGGAGGGPPPGPPGA----------GDRG----GGGPGGGGPGG-- 52
PGPP P G G G PG PG GD G G PG GP G
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPK 1008
Query: 53 GSAGGPSQPPGGGGPGIR 70
G+ G P QP G PG++
Sbjct: 1009 GNPGLPGQPGLIGPPGLK 1026
Score = 33.9 bits (76), Expect = 0.54
Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 11 PGPP--PPAGGGGGAGGAGGGPP-PGPPGAGDRGG--GGPG-GGGPGGGSAGGPSQPPGG 64
PGPP P G G GG G P PG PG G G PG G PG + GP+
Sbjct: 1192 PGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPK 1251
Query: 65 GGPG 68
G PG
Sbjct: 1252 GNPG 1255
Score = 33.5 bits (75), Expect = 0.70
Identities = 34/89 (38%), Positives = 35/89 (39%), Gaps = 28/89 (31%)
Query: 8 GPP--------PGPPPPAG--------GGGGAGGAGGGPP-PGPPGA----GDRGGGG-- 44
GPP PGPP G G GA G G P PG PGA G +G G
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDI 550
Query: 45 ---PGGGGPGG--GSAGGPSQPPGGGGPG 68
PG G G GS G P P G PG
Sbjct: 551 LTFPGMKGDKGELGSPGAPGLPGLPGTPG 579
Score = 33.5 bits (75), Expect = 0.70
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 10 PPGPPPPAGGGGGAGGAG-GGPP-----PGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
PPG G G G G GPP PG PG+ G G PG S G P P
Sbjct: 1022 PPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGP 1081
Query: 64 GGGPGI 69
G PG+
Sbjct: 1082 KGEPGL 1087
Score = 33.1 bits (74), Expect = 0.92
Identities = 28/81 (34%), Positives = 31/81 (38%), Gaps = 21/81 (25%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGG------PGGGGPGG----------- 52
PGP G G +G G PG PG GD+G G PG GP G
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNP 1094
Query: 53 ---GSAGGPSQPPGGGGPGIR 70
GS G P P G PG +
Sbjct: 1095 GIKGSVGDPGLPGLPGTPGAK 1115
Score = 32.3 bits (72), Expect = 1.6
Identities = 21/58 (36%), Positives = 21/58 (36%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGP 67
P G P G G G G PG PG G G PG GP P G GP
Sbjct: 1081 PKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGP 1138
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPG----AGDRGG-GGPGGGGPGG-------GSAGG 57
PPGP G G G G G PG G++G G PG GP G GS G
Sbjct: 906 PPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGE 965
Query: 58 PSQPPGGGGPGI 69
+P G PG+
Sbjct: 966 KGEPGLPGIPGV 977
Score = 30.4 bits (67), Expect = 5.9
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 11 PGPPPPAGGGGGAGGAGGGPP--PGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQPPGG 64
PG P G G G + G P PGP G G G PG G G G G P P
Sbjct: 1056 PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAK 1115
Query: 65 GGPGI 69
G PG+
Sbjct: 1116 GQPGL 1120
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 73.2 bits (178), Expect = 8e-13
Identities = 101/355 (28%), Positives = 121/355 (34%), Gaps = 91/355 (25%)
Query: 396 GPPGPPGGPGMP-----PGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGE 445
GPPGP G PG+P PG GR +G GPPG GE F++P G
Sbjct: 710 GPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALP----------GPP 759
Query: 446 NVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG 505
+ GA L P GD RG P + + + GP VGP
Sbjct: 760 GPPGLPGFKGA-------LGPKGD--------RGFPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 506 PGGPGPAGPMG------------PFNPGPFNQ----------GPPGAPP-HAGGPPPHQY 542
G PGP GP G P PGP Q G PG P GPP +
Sbjct: 805 -GQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPP 602
P G P P +P P KA A+ PPGP PGP P
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMG-----PPGP-PGPLGIPGRSG 917
Query: 603 A---------QGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYK 653
QG+P P PTG+ K +P PG P D
Sbjct: 918 VPGLKGDDGLQGQPGLPGPTGE-----------KGSKGEPGLPGPPGPMD-----PNLLG 961
Query: 654 KQAQVATGGGPGAPPGSQP-DYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQ 707
+ + G PG P S P Y + + + PGP GP+ P GQ
Sbjct: 962 SKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQ 1016
Score = 65.9 bits (159), Expect = 1e-10
Identities = 190/754 (25%), Positives = 243/754 (32%), Gaps = 180/754 (23%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGI 69
PGPP P G G G G PG PG G G GP G G+ G P G PG+
Sbjct: 83 PGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGL 142
Query: 70 RKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDS 129
+ + + G+ + + +S P G K P + L
Sbjct: 143 QGPPGPPGIPGMK-------GEPGSIIMSSLP-----GPKGNPGYPGPPGIQGLPGP-TG 189
Query: 130 ISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE 189
I +GP PP P G GL +G +N Q G K + G P
Sbjct: 190 IPGPIGPPGPPGLMG-------PPGPPGLPGPKGNMGLN-FQGPKGEKGEQGLQ--GPP- 238
Query: 190 RSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVI 249
G P + + K +D +G G PG D G G I P G G
Sbjct: 239 ------GPPGQISEQKRPIDVEFQKGDQGLPG---DRGPPGPPG----IRGPPGPPGGEK 285
Query: 250 GKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDP-YKVQQACEMVMDILRERDQ 308
G+ GE Q G + +DG +N P + GDP Y + R+ ++
Sbjct: 286 GEKGE-----QGEPGKRGKPGKDG-ENGQPGIP-GLPGDPGYPGEPG--------RDGEK 330
Query: 309 GGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEM-IKKIQNDAGVRIQFKQDDGTGPE 367
G GD G + +PR G+ IG G + + + + G R
Sbjct: 331 GQKGDTGPPGPP-----GLVIPRPGTGITIGEKGNIGLPGLPGEKGER------------ 373
Query: 368 KIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPG----GPGMPPGGRGRGRGQGNWGPP 423
I GPP G PGPPG GP PPG G +G+ GPP
Sbjct: 374 GFPGIQGPP-------------------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPP 414
Query: 424 GGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSP-- 481
G SIP GL G + G + S ++ G P GSP
Sbjct: 415 G----ISIPGPP-GLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPP-----GSPGD 464
Query: 482 -----------QQIDHAKQLIEEKIEGPLCPVGPG-PGGPGPAGPMG-PFNPGPFNQ--- 525
+ D I I GP P PG PG PGP G +G P G Q
Sbjct: 465 KGLQGEQGVKGDKGDTCFNCIGTGISGP--PGQPGLPGLPGPPGSLGFPGQKGEKGQAGA 522
Query: 526 -GPPGAPPHAGGPPPHQYP------------PQGWGNTYPQWQPPAPHDPSKAAAAAADP 572
GP G P G P +P P G+ P AP P D
Sbjct: 523 TGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDG 582
Query: 573 NAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGE--PPQPP-------------PTGQSD 617
PG +PGP P +GE PP P P G
Sbjct: 583 L--------------PG-LPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGP 627
Query: 618 YTKAWEEYYKKIGQQPQQPGAP-----PQQDYTKAWEEYYK----KQAQVATGGGPGAPP 668
E+ + + P QPG P P Q T+ + + V G PG P
Sbjct: 628 PGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLP- 686
Query: 669 GSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPP 702
QP G PGP GP+ P
Sbjct: 687 -GQPGLPGIPGSKGEPGIPGIG-LPGPPGPKGFP 718
Score = 62.8 bits (151), Expect = 1e-09
Identities = 102/353 (28%), Positives = 122/353 (34%), Gaps = 75/353 (21%)
Query: 395 SGPPGPPGGPGMPPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGEN--- 446
SGPPG PG PG PG G G G GPPG G+ P + G G N
Sbjct: 1136 SGPPGNPGLPG-EPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP 1194
Query: 447 --VKAINQQTG----AFVEISRQLP-PNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPL 499
+ ++ Q G + + LP P G+P F F ++GP
Sbjct: 1195 PGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF-----------------PGVQGPP 1237
Query: 500 CPVG-PGP------GGPGPAGPMG-PFNPGPFNQGPPGAPPHAG-----GPPPHQYPPQG 546
P G PGP G PGP GP G P PGP +GPPG P + G G P P
Sbjct: 1238 GPPGSPGPALEGPKGNPGPQGPPGRPGLPGP--EGPPGLPGNGGIKGEKGNPGQPGLPGL 1295
Query: 547 WGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGE 606
G Q P +P + + + P VPG A P P
Sbjct: 1296 PGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSA-GPEGEPGLIG 1354
Query: 607 PPQPP----PTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGG 662
PP PP P+GQS K + I QP G P Q Q G
Sbjct: 1355 PPGPPGLPGPSGQSIIIKG-DAGPPGIPGQPGLKGLPGPQG----------PQGLPGPTG 1403
Query: 663 GPGAP-PGSQPDYSAAWAEYYRQQAAYYGQ--------TPGPGGPQPPPTQQG 706
PG P P + A + GQ PGP G Q PP G
Sbjct: 1404 PPGDPGRNGLPGFDGAGGR--KGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1454
Score = 62.4 bits (150), Expect = 1e-09
Identities = 205/819 (25%), Positives = 262/819 (31%), Gaps = 228/819 (27%)
Query: 10 PPGPPPPAGGGGGAGGAGGGP-----------PPGPPGA--------------------G 38
PPGPP G G G GP PPGPPG G
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPG 264
Query: 39 DRGGGGPGG-----GGPGG--GSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGD 91
DRG GP G G PGG G G +P G PG K G +
Sbjct: 265 DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPG------------------KDGEN 306
Query: 92 AATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRV 151
+ D G+ G+ + DG++ + G G + P P T +T +
Sbjct: 307 GQPGIPGLPGDPGYPGEPGR--DGEKGQKGDTGPPGPP-----GLVIPRPGTGITIGEKG 359
Query: 152 PDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDI 211
G+ GL +G IQ G G P +V P +
Sbjct: 360 NIGLPGLPGEKGERGFPGIQGPPGLP--------GPPGAAVMGPPGPPGFPGERGQ---- 407
Query: 212 VSRGRGGPPGQFHDNANG--GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIL 269
+G GPPG G GQ G + P G AG I E +
Sbjct: 408 --KGDEGPPGISIPGPPGLDGQPGA-PGLPGPPGPAGPHIPPSDEICEPGPP-------- 456
Query: 270 IQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSR-IGGGIDVP 328
G + DK L + +QG GD+ + IG GI P
Sbjct: 457 ---GPPGSPGDKGL---------------------QGEQGVKGDKGDTCFNCIGTGISGP 492
Query: 329 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDR--CEHAARII 386
+ + + G G + G + + Q TGP+ + I G P +
Sbjct: 493 PGQPGLPGLPGPPGSL-----GFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEP 547
Query: 387 NDLL-------QSLRSGPPGPPGGPGMP-----------PGGRGRGRG---QGNWGPPGG 425
D+L G PG PG PG+P PG +G G +G GPPG
Sbjct: 548 GDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGN 607
Query: 426 EMTFSIPTH----------KCGLVIGRGGENVKAINQQTGAFVEISRQLP-PNGDPNFKL 474
+P + G V +G + V Q G +P P GDP +
Sbjct: 608 PGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPG--------IPGPKGDPG-QT 658
Query: 475 FIIRGSPQQIDHAKQLIEEKIEG-PLCPVGPG-PGGPGPAGPMG------PFNPGPFN-- 524
G P + + + + G P P PG PG PG G G P PGP
Sbjct: 659 ITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFP 718
Query: 525 --QGPPGAPPHAG-----GPP-PHQYP-PQGWGNTYPQWQPPAPHDPSKAAAAAADPNAA 575
GPPGAP G GPP P +P P+G P + P P P A
Sbjct: 719 GIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG----EPGFALPGPPGPPGLPGF----KGA 770
Query: 576 WAAYYSHYYQQPPGP--------VPGP--------APAPAAPP------AQGEPPQPP-- 611
+ PPGP +PGP P P PP QG PP PP
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQG-PPGPPGI 829
Query: 612 --PTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPG 669
P GQ I + PG PP D E + + GP PPG
Sbjct: 830 PGPIGQPG--------LHGIPGEKGDPG-PPGLDVPGPPGE--RGSPGIPGAPGPIGPPG 878
Query: 670 SQPDYSAAWAEYYRQQAAYYGQ--TPGPGGPQPPPTQQG 706
S A A + G PGP GP P + G
Sbjct: 879 SPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSG 917
Score = 59.7 bits (143), Expect = 9e-09
Identities = 176/686 (25%), Positives = 216/686 (31%), Gaps = 172/686 (25%)
Query: 10 PPGPPPPAGGGGGAG--------GAGGGPP-PGPPGAGDRGGGGPGG-----GGPGGGSA 55
PPGPP G G G G G P PGPPG +G GP G G PG
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGI--QGLPGPTGIPGPIGPPGPPGL 202
Query: 56 GGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDG 115
GP PPG GP K Q + + G G G Q+ +
Sbjct: 203 MGPPGPPGLPGP---KGNMGLNFQGPKGEKGEQGLQ------------GPPGPPGQISEQ 247
Query: 116 DQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSG 175
+P + + GP PP R P G G G GEQ ++
Sbjct: 248 KRPIDVEFQKGDQGLPGDRGPPGPP-------GIRGPPGPPGGEKGEKGEQGEPGKRGKP 300
Query: 176 CK--VQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNG 233
K P GLP G P GR G GQ D G G
Sbjct: 301 GKDGENGQPGIPGLP-GDPGYPGEP----------------GRDGEKGQKGDTGPPGPPG 343
Query: 234 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPLRIIGDPYKV 292
++IP G+ IG+ G G+ + + G + + P + G P
Sbjct: 344 ----LVIPRPGTGITIGEKG--------NIGLPGLPGEKGERGFPGIQGPPGLPGPPGAA 391
Query: 293 QQACEMVMDILRERDQGGFGDRNEYGSRIGG--GID-------VPVPRHSVGVVIGRSGE 343
ER Q GD G I G G+D +P P G I S E
Sbjct: 392 VMGPPGPPGFPGERGQK--GDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDE 449
Query: 344 MI-------------KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLL 390
+ K +Q + GV K D G D C + +
Sbjct: 450 ICEPGPPGPPGSPGDKGLQGEQGV----KGDKG-------------DTCFNC-------I 485
Query: 391 QSLRSGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVK 448
+ SGPPG PG PG+ PPG G +G G G +P G+ G
Sbjct: 486 GTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLP----GIPGAPGAPGFP 541
Query: 449 AINQQTGAFVEI------SRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIE------ 496
+ G + +L G P L + G+P Q D L K E
Sbjct: 542 GSKGEPGDILTFPGMKGDKGELGSPGAPG--LPGLPGTPGQ-DGLPGLPGPKGEPGGITF 598
Query: 497 ----GPLCPVGPG-PGGPGPAGPMGPFN---PGPF----------NQGPPGAPPHAGGP- 537
GP P PG PG PG GPMGP PGP N G PG P G P
Sbjct: 599 KGERGP--PGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPG 656
Query: 538 -----PPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGP-- 590
P P G P P P + + PPGP
Sbjct: 657 QTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKG 716
Query: 591 ---VPGPAPAPAAPPAQG--EPPQPP 611
+PGP AP P G PP PP
Sbjct: 717 FPGIPGPPGAPGTPGRIGLEGPPGPP 742
Score = 58.5 bits (140), Expect = 2e-08
Identities = 98/353 (27%), Positives = 114/353 (32%), Gaps = 88/353 (24%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQ-GNWGPPG-----GEMTFSIPTHKCGLVIGRGGENVKA 449
GPPGP G PG+P GQ G GPPG G+M F P G
Sbjct: 1003 GPPGPKGNPGLP--------GQPGLIGPPGLKGTIGDMGFPGPQGV------EGPPGPSG 1048
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDH-------AKQLIEEKIEGPLCPV 502
+ Q G+ + Q GDP + G P I+ + P P
Sbjct: 1049 VPGQPGS-PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPG 1107
Query: 503 GPG-------------PGGPGPAGPMG----PFNPG-PFNQGPPGAPPHAG--GPPPHQY 542
PG PG PGP GP G P NPG P GP G H G GPP +
Sbjct: 1108 LPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKG 1167
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPP 602
P G P Q P P +P S Q+ G +PG P P
Sbjct: 1168 KPGQDGIPGPAGQKGEPGQP-----GFGNPGPPGLPGLSG--QKGDGGLPGIPGNPGLPG 1220
Query: 603 AQGEP-------PQPPPTGQSDYTKAWEEYYKKIGQQ--PQQPGAPPQQDYTKAWEEYYK 653
+GEP Q PP A E G Q P +PG P
Sbjct: 1221 PKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLP-------------- 1266
Query: 654 KQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQG 706
GP PPG + + Q G PG G Q PP QG
Sbjct: 1267 ---------GPEGPPGLPGNGGIKGEKGNPGQPGLPG-LPGLKGDQGPPGLQG 1309
Score = 52.4 bits (124), Expect = 1e-06
Identities = 89/340 (26%), Positives = 105/340 (30%), Gaps = 97/340 (28%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP GPPG PG+P PG +G G GPPG IP GR G V
Sbjct: 872 GPIGPPGSPGLPGKAGASGFPGTKGE---MGMMGPPGPPGPLGIP--------GRSG--V 918
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP--G 505
+ G ++G P + GP G
Sbjct: 919 PGLKGDDG---------------------LQGQP------------GLPGPTGEKGSKGE 945
Query: 506 PGGPGPAGPMGPFNPGPFNQ-GPPGAP--PHAGGPPPHQYPPQGWGNTYPQWQP--PAPH 560
PG PGP GPM P G + G PG P P GP +Q P G QP P P
Sbjct: 946 PGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPP 1005
Query: 561 DPSKAAAAAADPNAAWAAYYSHYYQQP--PGP-----VPGPAPAPAAPPAQGEPPQPPPT 613
P P PGP PGP+ P P + G P Q
Sbjct: 1006 GPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 614 GQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAP--PGS- 670
G + +P PG P + V G PG P PG+
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGI----------KGSVGDPGLPGLPGTPGAK 1115
Query: 671 -QPDYSAAWAEYYRQQAAYYGQTPGPGGPQ---PPPTQQG 706
QP + TPGP GP+ PP G
Sbjct: 1116 GQPGLPG------------FPGTPGPPGPKGISGPPGNPG 1143
Score = 47.0 bits (110), Expect = 6e-05
Identities = 95/358 (26%), Positives = 114/358 (31%), Gaps = 72/358 (20%)
Query: 365 GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGP-- 422
GP I + G P ++ S GP G PG PG PPG +G G GP
Sbjct: 147 GPPGIPGMKGEP----------GSIIMSSLPGPKGNPGYPG-PPGIQGLPGPTGIPGPIG 195
Query: 423 PGGEMTFSIPTHKCGLVIGRG--GENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGS 480
P G P GL +G G N + + G E Q PP G
Sbjct: 196 PPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKG---EQGLQGPP------------GP 240
Query: 481 PQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPH 540
P QI K+ I+ + + + G PGP G GP PGP G G G P
Sbjct: 241 PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGP--PGP-PGGEKGEKGEQGEPGKR 297
Query: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAA 600
P + N P P P DP D PPGP P P
Sbjct: 298 GKPGKDGENGQP-GIPGLPGDPGYPGEPGRDGEKGQKGDTG-----PPGPPGLVIPRPGT 351
Query: 601 PPAQGE------PPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYK- 653
GE P P G E + I P PG P +
Sbjct: 352 GITIGEKGNIGLPGLPGEKG--------ERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPG 403
Query: 654 KQAQVATGGGPG----APPG--SQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQ 705
++ Q G PG PPG QP A PGP GP PP+ +
Sbjct: 404 ERGQKGDEGPPGISIPGPPGLDGQPG------------APGLPGPPGPAGPHIPPSDE 449
Score = 45.1 bits (105), Expect = 2e-04
Identities = 28/63 (44%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGI 69
PGPP P G G G G PPG G GD G GP G G +G P QP G PG
Sbjct: 1002 PGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQ 1061
Query: 70 RKD 72
+ D
Sbjct: 1062 KGD 1064
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/76 (43%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 8 GPP-----PGPPPPAGGGGGAGGAGGGPPPGPPG-------AGDRG-GGGPGGGGPGGGS 54
GPP PG P P GGGG G G G PG AG +G G PG G PG
Sbjct: 1137 GPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPG 1196
Query: 55 AGGPSQPPGGGG-PGI 69
G S G GG PGI
Sbjct: 1197 LPGLSGQKGDGGLPGI 1212
Score = 44.7 bits (104), Expect = 3e-04
Identities = 30/69 (43%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 6 TGGPP-----PGPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGGGSAGGPS 59
T GPP GPP G G G GGG PG PG G++G G G G G P
Sbjct: 1126 TPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG 1185
Query: 60 QPPGGGGPG 68
Q PG G PG
Sbjct: 1186 Q-PGFGNPG 1193
Score = 44.7 bits (104), Expect = 3e-04
Identities = 28/64 (43%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA------GDRGGGGPGG--GGPGGGSAGGPSQPP 62
PG P P G G G G PPGPPG+ G +G GP G G PG GP P
Sbjct: 1216 PGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLP 1275
Query: 63 GGGG 66
G GG
Sbjct: 1276 GNGG 1279
Score = 44.7 bits (104), Expect = 3e-04
Identities = 28/66 (42%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 10 PPGPPPPAGGG--GGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGGGSAGGPSQPPGGGG 66
PPGPP G G G G PPG PG G G G G G G G P QP G
Sbjct: 1236 PPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGL 1295
Query: 67 PGIRKD 72
PG++ D
Sbjct: 1296 PGLKGD 1301
Score = 43.5 bits (101), Expect = 7e-04
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 11/76 (14%)
Query: 8 GPP----PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
GPP PGPP G G G G PPG PG + G G G GP PPG
Sbjct: 849 GPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPG 908
Query: 64 -------GGGPGIRKD 72
G PG++ D
Sbjct: 909 PLGIPGRSGVPGLKGD 924
Score = 43.5 bits (101), Expect = 7e-04
Identities = 70/235 (29%), Positives = 80/235 (34%), Gaps = 56/235 (23%)
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
R G PGP G PG+P G +G +GN G PG +P GL +G + +
Sbjct: 1262 RPGLPGPEGPPGLPGNGGIKGE-KGNPGQPG------LP----GLPGLKGDQGPPGLQGN 1310
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPL-CPVGPGP-GGPGP 511
G GDP L + G P ++GP P GP G PG
Sbjct: 1311 PGR----PGLNGMKGDPG--LPGVPGFP------------GMKGPSGVPGSAGPEGEPGL 1352
Query: 512 AGPMGPFN-PGPFNQ--------GPPGAPPHAG--GPPPHQYPPQGWGNTYPQWQPPAPH 560
GP GP PGP Q GPPG P G G P Q P G T P P
Sbjct: 1353 IGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNG 1412
Query: 561 DP--SKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPT 613
P A DP P P P P PP PP T
Sbjct: 1413 LPGFDGAGGRKGDPGL------------PGQPGTRGLDGPPGPDGLQGPPGPPGT 1455
Score = 42.7 bits (99), Expect = 0.001
Identities = 61/216 (28%), Positives = 78/216 (36%), Gaps = 51/216 (23%)
Query: 504 PG-PGGPGPAGPMGPFN----------PGPFN-QGP------------PGAPPHAGGPPP 539
PG PG PGP GP GP PGP +GP PG P H G P P
Sbjct: 59 PGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGP 118
Query: 540 HQYP-----------PQGWGNTYPQWQPPAPHDPS-KAAAAAADPNAAWAAYYSHYYQQP 587
P P G Q P P P K + ++ + Y P
Sbjct: 119 QGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGP 178
Query: 588 PG--------PVPGPAPAPAAPPAQGEPPQPP--PTGQSDYTKAWEEYYKKIGQQPQQ-- 635
PG +PGP P PP PP PP P + + ++ + G+Q Q
Sbjct: 179 PGIQGLPGPTGIPGPI-GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP 237
Query: 636 PGAPPQ-QDYTKAWEEYYKKQAQVATGG-GPGAPPG 669
PG P Q + + + ++K Q G GP PPG
Sbjct: 238 PGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPG 273
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/75 (42%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 12 GPPPPAGGGGGAG--GAGGGPPPGPPG-AGDRGGGG-------PGGGGPGG-----GSAG 56
G P PAG G G G G PPG PG +G +G GG PG GP G G G
Sbjct: 1173 GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPG 1232
Query: 57 --GPSQPPGGGGPGI 69
GP PPG GP +
Sbjct: 1233 VQGPPGPPGSPGPAL 1247
Score = 41.6 bits (96), Expect = 0.003
Identities = 33/78 (42%), Positives = 36/78 (46%), Gaps = 15/78 (19%)
Query: 8 GPP-----PGPPPPAG--GGGGAGGAGGGP-PPGPPG-AGDRGGGGPGG--GGPG----G 52
GPP PGP P G G GG G G P PG PG G +G GP G G PG
Sbjct: 1258 GPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLN 1317
Query: 53 GSAGGPSQPPGGGGPGIR 70
G G P P G PG++
Sbjct: 1318 GMKGDPGLPGVPGFPGMK 1335
Score = 41.2 bits (95), Expect = 0.003
Identities = 28/62 (45%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGG-PGGGGP--GGGSAGGPSQPPGGGG 66
PG P G G G G PPGP G +G G G PG GP GGG G P P G
Sbjct: 1109 PGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK 1168
Query: 67 PG 68
PG
Sbjct: 1169 PG 1170
Score = 40.8 bits (94), Expect = 0.004
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGP------PGAGDRGGGG----PGGGGPGG--GSAGGP 58
PG P P G G G G PPGP G++G G PG GP G G G P
Sbjct: 931 PGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDP 990
Query: 59 SQPPGGGGPGI 69
QP G PG+
Sbjct: 991 GQPGLSGQPGL 1001
Score = 40.4 bits (93), Expect = 0.006
Identities = 31/73 (42%), Positives = 32/73 (43%), Gaps = 19/73 (26%)
Query: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPPG----AGDRGGGGPGG----GGPG-GGSAGGP 58
GPP P PP GA PPGPPG G +G GP G G PG G G P
Sbjct: 380 GPPGLPGPP--------GAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAP 431
Query: 59 S--QPPGGGGPGI 69
PPG GP I
Sbjct: 432 GLPGPPGPAGPHI 444
Score = 40.4 bits (93), Expect = 0.006
Identities = 32/78 (41%), Positives = 33/78 (42%), Gaps = 19/78 (24%)
Query: 8 GPPP----GPPPPAGGGGGAGGAGG-GPP----PGPPGAGDRGG--GGPGGGGPGGG--- 53
GPP GPP P G G G G GPP PGPPG + G G PG GP G
Sbjct: 386 GPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIP 445
Query: 54 -----SAGGPSQPPGGGG 66
GP PPG G
Sbjct: 446 PSDEICEPGPPGPPGSPG 463
Score = 40.0 bits (92), Expect = 0.007
Identities = 32/71 (45%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 8 GPPP-GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRG-----GGGPG-GGGPG-GGSAGGP 58
GPP GPP P G G G AG PG PG GD G G PG G PG G G P
Sbjct: 621 GPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLP 680
Query: 59 SQPPGGGGPGI 69
P G PG+
Sbjct: 681 GDPGLPGQPGL 691
Score = 38.1 bits (87), Expect = 0.028
Identities = 31/72 (43%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 3 DYSTGGPP--PGPP--PPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGSA 55
D G P PG P P G G G G PGPPG G G GP G G PG
Sbjct: 676 DVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGL 735
Query: 56 GGPSQPPGGGGP 67
GP PPG GP
Sbjct: 736 EGPPGPPGFPGP 747
Score = 38.1 bits (87), Expect = 0.028
Identities = 34/87 (39%), Positives = 35/87 (40%), Gaps = 27/87 (31%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGP----------PPGPPG-------------AGDRG-G 42
G P P PP + G G GA G P PPGPPG GD G
Sbjct: 869 GAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQ 928
Query: 43 GGPGGGGPGG--GSAGGPSQPPGGGGP 67
G PG GP G GS G P PG GP
Sbjct: 929 GQPGLPGPTGEKGSKGEPGL-PGPPGP 954
Score = 37.7 bits (86), Expect = 0.037
Identities = 29/65 (44%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGG--GSAGGPSQPPG 63
GPP PG P G G G G P GPPG R G PG G GG G G P QP
Sbjct: 1376 GPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL-PGFDGAGGRKGDPGLPGQPGT 1434
Query: 64 GGGPG 68
G G
Sbjct: 1435 RGLDG 1439
Score = 37.7 bits (86), Expect = 0.037
Identities = 27/60 (45%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 10 PPGPPPPAGGGG-----GAGGAGGGPP-PGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
P GPP G G GAGG G P PG PG RG GP PG GP PPG
Sbjct: 1401 PTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT--RGLDGP----PGPDGLQGPPGPPG 1454
Score = 37.0 bits (84), Expect = 0.063
Identities = 27/65 (41%), Positives = 28/65 (43%), Gaps = 10/65 (15%)
Query: 10 PPGPPPPAGGGGGA----GGAGGGPPPGPPGAGDRGGGGPGGGGPGG--GSAGGPSQPPG 63
PPGPP G G + G AG PG PG G PG GP G G G P P
Sbjct: 1355 PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLK----GLPGPQGPQGLPGPTGPPGDPGR 1410
Query: 64 GGGPG 68
G PG
Sbjct: 1411 NGLPG 1415
Score = 36.6 bits (83), Expect = 0.083
Identities = 29/64 (45%), Positives = 30/64 (46%), Gaps = 15/64 (23%)
Query: 6 TGGPPP-GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGG--GSAG--GPS 59
TG P P GPP P G G PPGPPG G +G G GP G G G GP
Sbjct: 188 TGIPGPIGPPGPPGLMG---------PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPP 238
Query: 60 QPPG 63
PPG
Sbjct: 239 GPPG 242
Score = 36.6 bits (83), Expect = 0.083
Identities = 27/63 (42%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQP--PGG 64
PG P G G G G PG PGA + G G PG GP G G +G P P PG
Sbjct: 1088 PGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGE 1147
Query: 65 GGP 67
GP
Sbjct: 1148 PGP 1150
Score = 36.6 bits (83), Expect = 0.083
Identities = 28/62 (45%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGG-PGGGSAGGPSQPPG-GGG 66
PGP P G G G G PPG PG G G G PG G PG G PPG G
Sbjct: 1254 PGPQGPPGRPGLPGPEG---PPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGN 1310
Query: 67 PG 68
PG
Sbjct: 1311 PG 1312
Score = 36.6 bits (83), Expect = 0.083
Identities = 45/170 (26%), Positives = 53/170 (31%), Gaps = 64/170 (37%)
Query: 365 GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMP--PGGRGRGRGQGNWGP 422
GPE ++GPP ++ +GPPG PG PG+ PG +G G GP
Sbjct: 1345 GPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGP 1404
Query: 423 PGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQ 482
PG +P G GG GDP
Sbjct: 1405 PGDPGRNGLPGFD-----GAGGR---------------------KGDPGL---------- 1428
Query: 483 QIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFN-QGPPGAP 531
PG PG G GP PGP QGPPG P
Sbjct: 1429 -----------------------PGQPGTRGLDGP--PGPDGLQGPPGPP 1453
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/78 (39%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 10 PPGPPPPAG------GGGGAGGAGGGP-------PPGPPGAGDRGG--GGPGGGG-PGGG 53
PPG P P+G G G G G P P GP G G G PG G PG
Sbjct: 1358 PPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD 1417
Query: 54 SAGGPSQPPG-GGGPGIR 70
AGG PG G PG R
Sbjct: 1418 GAGGRKGDPGLPGQPGTR 1435
Score = 35.8 bits (81), Expect = 0.14
Identities = 23/58 (39%), Positives = 23/58 (39%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGP 67
P GP G G G G PG GAG R G G PG GP P G GP
Sbjct: 1392 PQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGP 1449
Score = 35.4 bits (80), Expect = 0.18
Identities = 31/79 (39%), Positives = 31/79 (39%), Gaps = 18/79 (22%)
Query: 3 DYSTGGPPP--GPPPPAGGGGGAGGAGGGP-------------PPGPPGA-GDRG-GGGP 45
D GPP GPP P GG G G G P PG PG GD G G P
Sbjct: 265 DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEP 324
Query: 46 GGGGPGGGSAG-GPSQPPG 63
G G G GP PPG
Sbjct: 325 GRDGEKGQKGDTGPPGPPG 343
Score = 35.0 bits (79), Expect = 0.24
Identities = 29/71 (40%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGGGPPPGPPG-------AGDRGGGG-PGGGGPGGGSAGG 57
GPP PG P G G G G G PPGP G AG+ G G PG G G +
Sbjct: 603 GPPGNPGLPGLPGNIGPMGPPGFG-PPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQ 661
Query: 58 PSQPPGGGGPG 68
P +P G PG
Sbjct: 662 PGKPGLPGNPG 672
Score = 34.3 bits (77), Expect = 0.41
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGA----GDRGGGGPGGGGPGG--GSAGGPSQPPGGG 65
G P P G G G +G PG PG GD+G G G G G G P P G
Sbjct: 1033 GFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPG 1092
Query: 66 GPGIR 70
PGI+
Sbjct: 1093 NPGIK 1097
Score = 33.9 bits (76), Expect = 0.54
Identities = 29/78 (37%), Positives = 32/78 (41%), Gaps = 18/78 (23%)
Query: 11 PGPPPPAGGG--GGAGGAGGGPPPGPPGA----------GDRG----GGGPGGGGPGG-- 52
PGPP P G G G PG PG GD G G PG GP G
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPK 1008
Query: 53 GSAGGPSQPPGGGGPGIR 70
G+ G P QP G PG++
Sbjct: 1009 GNPGLPGQPGLIGPPGLK 1026
Score = 33.9 bits (76), Expect = 0.54
Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 11 PGPP--PPAGGGGGAGGAGGGPP-PGPPGAGDRGG--GGPG-GGGPGGGSAGGPSQPPGG 64
PGPP P G G GG G P PG PG G G PG G PG + GP+
Sbjct: 1192 PGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPK 1251
Query: 65 GGPG 68
G PG
Sbjct: 1252 GNPG 1255
Score = 33.5 bits (75), Expect = 0.70
Identities = 34/89 (38%), Positives = 35/89 (39%), Gaps = 28/89 (31%)
Query: 8 GPP--------PGPPPPAG--------GGGGAGGAGGGPP-PGPPGA----GDRGGGG-- 44
GPP PGPP G G GA G G P PG PGA G +G G
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDI 550
Query: 45 ---PGGGGPGG--GSAGGPSQPPGGGGPG 68
PG G G GS G P P G PG
Sbjct: 551 LTFPGMKGDKGELGSPGAPGLPGLPGTPG 579
Score = 33.5 bits (75), Expect = 0.70
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 10 PPGPPPPAGGGGGAGGAG-GGPP-----PGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
PPG G G G G GPP PG PG+ G G PG S G P P
Sbjct: 1022 PPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGP 1081
Query: 64 GGGPGI 69
G PG+
Sbjct: 1082 KGEPGL 1087
Score = 33.1 bits (74), Expect = 0.92
Identities = 28/81 (34%), Positives = 31/81 (38%), Gaps = 21/81 (25%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGG------PGGGGPGG----------- 52
PGP G G +G G PG PG GD+G G PG GP G
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNP 1094
Query: 53 ---GSAGGPSQPPGGGGPGIR 70
GS G P P G PG +
Sbjct: 1095 GIKGSVGDPGLPGLPGTPGAK 1115
Score = 32.3 bits (72), Expect = 1.6
Identities = 21/58 (36%), Positives = 21/58 (36%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGP 67
P G P G G G G PG PG G G PG GP P G GP
Sbjct: 1081 PKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGP 1138
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPG----AGDRGG-GGPGGGGPGG-------GSAGG 57
PPGP G G G G G PG G++G G PG GP G GS G
Sbjct: 906 PPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGE 965
Query: 58 PSQPPGGGGPGI 69
+P G PG+
Sbjct: 966 KGEPGLPGIPGV 977
Score = 30.4 bits (67), Expect = 5.9
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 11 PGPPPPAGGGGGAGGAGGGPP--PGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQPPGG 64
PG P G G G + G P PGP G G G PG G G G G P P
Sbjct: 1056 PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAK 1115
Query: 65 GGPGI 69
G PG+
Sbjct: 1116 GQPGL 1120
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 73.2 bits (178), Expect = 8e-13
Identities = 101/355 (28%), Positives = 121/355 (34%), Gaps = 91/355 (25%)
Query: 396 GPPGPPGGPGMP-----PGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGE 445
GPPGP G PG+P PG GR +G GPPG GE F++P G
Sbjct: 710 GPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALP----------GPP 759
Query: 446 NVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPG 505
+ GA L P GD RG P + + + GP VGP
Sbjct: 760 GPPGLPGFKGA-------LGPKGD--------RGFPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 506 PGGPGPAGPMG------------PFNPGPFNQ----------GPPGAPP-HAGGPPPHQY 542
G PGP GP G P PGP Q G PG P GPP +
Sbjct: 805 -GQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPP 602
P G P P +P P KA A+ PPGP PGP P
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMG-----PPGP-PGPLGIPGRSG 917
Query: 603 A---------QGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYK 653
QG+P P PTG+ K +P PG P D
Sbjct: 918 VPGLKGDDGLQGQPGLPGPTGE-----------KGSKGEPGLPGPPGPMD-----PNLLG 961
Query: 654 KQAQVATGGGPGAPPGSQP-DYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQ 707
+ + G PG P S P Y + + + PGP GP+ P GQ
Sbjct: 962 SKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQ 1016
Score = 65.9 bits (159), Expect = 1e-10
Identities = 190/754 (25%), Positives = 243/754 (32%), Gaps = 180/754 (23%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGI 69
PGPP P G G G G PG PG G G GP G G+ G P G PG+
Sbjct: 83 PGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGL 142
Query: 70 RKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDS 129
+ + + G+ + + +S P G K P + L
Sbjct: 143 QGPPGPPGIPGMK-------GEPGSIIMSSLP-----GPKGNPGYPGPPGIQGLPGP-TG 189
Query: 130 ISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE 189
I +GP PP P G GL +G +N Q G K + G P
Sbjct: 190 IPGPIGPPGPPGLMG-------PPGPPGLPGPKGNMGLN-FQGPKGEKGEQGLQ--GPP- 238
Query: 190 RSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVI 249
G P + + K +D +G G PG D G G I P G G
Sbjct: 239 ------GPPGQISEQKRPIDVEFQKGDQGLPG---DRGPPGPPG----IRGPPGPPGGEK 285
Query: 250 GKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDP-YKVQQACEMVMDILRERDQ 308
G+ GE Q G + +DG +N P + GDP Y + R+ ++
Sbjct: 286 GEKGE-----QGEPGKRGKPGKDG-ENGQPGIP-GLPGDPGYPGEPG--------RDGEK 330
Query: 309 GGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEM-IKKIQNDAGVRIQFKQDDGTGPE 367
G GD G + +PR G+ IG G + + + + G R
Sbjct: 331 GQKGDTGPPGPP-----GLVIPRPGTGITIGEKGNIGLPGLPGEKGER------------ 373
Query: 368 KIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPG----GPGMPPGGRGRGRGQGNWGPP 423
I GPP G PGPPG GP PPG G +G+ GPP
Sbjct: 374 GFPGIQGPP-------------------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPP 414
Query: 424 GGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSP-- 481
G SIP GL G + G + S ++ G P GSP
Sbjct: 415 G----ISIPGPP-GLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPP-----GSPGD 464
Query: 482 -----------QQIDHAKQLIEEKIEGPLCPVGPG-PGGPGPAGPMG-PFNPGPFNQ--- 525
+ D I I GP P PG PG PGP G +G P G Q
Sbjct: 465 KGLQGEQGVKGDKGDTCFNCIGTGISGP--PGQPGLPGLPGPPGSLGFPGQKGEKGQAGA 522
Query: 526 -GPPGAPPHAGGPPPHQYP------------PQGWGNTYPQWQPPAPHDPSKAAAAAADP 572
GP G P G P +P P G+ P AP P D
Sbjct: 523 TGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDG 582
Query: 573 NAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGE--PPQPP-------------PTGQSD 617
PG +PGP P +GE PP P P G
Sbjct: 583 L--------------PG-LPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGP 627
Query: 618 YTKAWEEYYKKIGQQPQQPGAP-----PQQDYTKAWEEYYK----KQAQVATGGGPGAPP 668
E+ + + P QPG P P Q T+ + + V G PG P
Sbjct: 628 PGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLP- 686
Query: 669 GSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPP 702
QP G PGP GP+ P
Sbjct: 687 -GQPGLPGIPGSKGEPGIPGIG-LPGPPGPKGFP 718
Score = 62.4 bits (150), Expect = 1e-09
Identities = 205/819 (25%), Positives = 262/819 (31%), Gaps = 228/819 (27%)
Query: 10 PPGPPPPAGGGGGAGGAGGGP-----------PPGPPGA--------------------G 38
PPGPP G G G GP PPGPPG G
Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPG 264
Query: 39 DRGGGGPGG-----GGPGG--GSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGD 91
DRG GP G G PGG G G +P G PG K G +
Sbjct: 265 DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPG------------------KDGEN 306
Query: 92 AATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRV 151
+ D G+ G+ + DG++ + G G + P P T +T +
Sbjct: 307 GQPGIPGLPGDPGYPGEPGR--DGEKGQKGDTGPPGPP-----GLVIPRPGTGITIGEKG 359
Query: 152 PDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDI 211
G+ GL +G IQ G G P +V P +
Sbjct: 360 NIGLPGLPGEKGERGFPGIQGPPGLP--------GPPGAAVMGPPGPPGFPGERGQ---- 407
Query: 212 VSRGRGGPPGQFHDNANG--GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIL 269
+G GPPG G GQ G + P G AG I E +
Sbjct: 408 --KGDEGPPGISIPGPPGLDGQPGA-PGLPGPPGPAGPHIPPSDEICEPGPP-------- 456
Query: 270 IQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSR-IGGGIDVP 328
G + DK L + +QG GD+ + IG GI P
Sbjct: 457 ---GPPGSPGDKGL---------------------QGEQGVKGDKGDTCFNCIGTGISGP 492
Query: 329 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDR--CEHAARII 386
+ + + G G + G + + Q TGP+ + I G P +
Sbjct: 493 PGQPGLPGLPGPPGSL-----GFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEP 547
Query: 387 NDLL-------QSLRSGPPGPPGGPGMP-----------PGGRGRGRG---QGNWGPPGG 425
D+L G PG PG PG+P PG +G G +G GPPG
Sbjct: 548 GDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGN 607
Query: 426 EMTFSIPTH----------KCGLVIGRGGENVKAINQQTGAFVEISRQLP-PNGDPNFKL 474
+P + G V +G + V Q G +P P GDP +
Sbjct: 608 PGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPG--------IPGPKGDPG-QT 658
Query: 475 FIIRGSPQQIDHAKQLIEEKIEG-PLCPVGPG-PGGPGPAGPMG------PFNPGPFN-- 524
G P + + + + G P P PG PG PG G G P PGP
Sbjct: 659 ITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFP 718
Query: 525 --QGPPGAPPHAG-----GPP-PHQYP-PQGWGNTYPQWQPPAPHDPSKAAAAAADPNAA 575
GPPGAP G GPP P +P P+G P + P P P A
Sbjct: 719 GIPGPPGAPGTPGRIGLEGPPGPPGFPGPKG----EPGFALPGPPGPPGLPGF----KGA 770
Query: 576 WAAYYSHYYQQPPGP--------VPGP--------APAPAAPP------AQGEPPQPP-- 611
+ PPGP +PGP P P PP QG PP PP
Sbjct: 771 LGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQG-PPGPPGI 829
Query: 612 --PTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPG 669
P GQ I + PG PP D E + + GP PPG
Sbjct: 830 PGPIGQPG--------LHGIPGEKGDPG-PPGLDVPGPPGE--RGSPGIPGAPGPIGPPG 878
Query: 670 SQPDYSAAWAEYYRQQAAYYGQ--TPGPGGPQPPPTQQG 706
S A A + G PGP GP P + G
Sbjct: 879 SPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSG 917
Score = 59.7 bits (143), Expect = 9e-09
Identities = 176/686 (25%), Positives = 216/686 (31%), Gaps = 172/686 (25%)
Query: 10 PPGPPPPAGGGGGAG--------GAGGGPP-PGPPGAGDRGGGGPGG-----GGPGGGSA 55
PPGPP G G G G G P PGPPG +G GP G G PG
Sbjct: 145 PPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGI--QGLPGPTGIPGPIGPPGPPGL 202
Query: 56 GGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDG 115
GP PPG GP K Q + + G G G Q+ +
Sbjct: 203 MGPPGPPGLPGP---KGNMGLNFQGPKGEKGEQGLQ------------GPPGPPGQISEQ 247
Query: 116 DQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSG 175
+P + + GP PP R P G G G GEQ ++
Sbjct: 248 KRPIDVEFQKGDQGLPGDRGPPGPP-------GIRGPPGPPGGEKGEKGEQGEPGKRGKP 300
Query: 176 CK--VQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNG 233
K P GLP G P GR G GQ D G G
Sbjct: 301 GKDGENGQPGIPGLP-GDPGYPGEP----------------GRDGEKGQKGDTGPPGPPG 343
Query: 234 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN-TNVDKPLRIIGDPYKV 292
++IP G+ IG+ G G+ + + G + + P + G P
Sbjct: 344 ----LVIPRPGTGITIGEKG--------NIGLPGLPGEKGERGFPGIQGPPGLPGPPGAA 391
Query: 293 QQACEMVMDILRERDQGGFGDRNEYGSRIGG--GID-------VPVPRHSVGVVIGRSGE 343
ER Q GD G I G G+D +P P G I S E
Sbjct: 392 VMGPPGPPGFPGERGQK--GDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDE 449
Query: 344 MI-------------KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLL 390
+ K +Q + GV K D G D C + +
Sbjct: 450 ICEPGPPGPPGSPGDKGLQGEQGV----KGDKG-------------DTCFNC-------I 485
Query: 391 QSLRSGPPGPPGGPGM--PPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVK 448
+ SGPPG PG PG+ PPG G +G G G +P G+ G
Sbjct: 486 GTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLP----GIPGAPGAPGFP 541
Query: 449 AINQQTGAFVEI------SRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIE------ 496
+ G + +L G P L + G+P Q D L K E
Sbjct: 542 GSKGEPGDILTFPGMKGDKGELGSPGAPG--LPGLPGTPGQ-DGLPGLPGPKGEPGGITF 598
Query: 497 ----GPLCPVGPG-PGGPGPAGPMGPFN---PGPF----------NQGPPGAPPHAGGP- 537
GP P PG PG PG GPMGP PGP N G PG P G P
Sbjct: 599 KGERGP--PGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPG 656
Query: 538 -----PPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGP-- 590
P P G P P P + + PPGP
Sbjct: 657 QTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKG 716
Query: 591 ---VPGPAPAPAAPPAQG--EPPQPP 611
+PGP AP P G PP PP
Sbjct: 717 FPGIPGPPGAPGTPGRIGLEGPPGPP 742
Score = 59.3 bits (142), Expect = 1e-08
Identities = 100/354 (28%), Positives = 120/354 (33%), Gaps = 74/354 (20%)
Query: 395 SGPPGPPGGPGMPPGGRGRGRGQGNWGPPG-----GEMTFSIPTHKCGLVIGRGGEN--- 446
SGPPG PG PG PG G G G GPPG G+ P + G G N
Sbjct: 1136 SGPPGNPGLPG-EPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP 1194
Query: 447 --VKAINQQTG----AFVEISRQLP-PNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPL 499
+ ++ Q G + + LP P G+P F F ++GP
Sbjct: 1195 PGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF-----------------PGVQGPP 1237
Query: 500 CPVG-PGP------GGPGPAGPMG--PFNPGPFNQGPPGAPPHAG-----GPPPHQYPPQ 545
P G PGP G PGP GP G F P +GPPG P + G G P P
Sbjct: 1238 GPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPG 1297
Query: 546 GWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQG 605
G Q P +P + + + P VPG A P P
Sbjct: 1298 LPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSA-GPEGEPGLI 1356
Query: 606 EPPQPP----PTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATG 661
PP PP P+GQS K + I QP G P Q Q
Sbjct: 1357 GPPGPPGLPGPSGQSIIIKG-DAGPPGIPGQPGLKGLPGPQG----------PQGLPGPT 1405
Query: 662 GGPGAP-PGSQPDYSAAWAEYYRQQAAYYGQ--------TPGPGGPQPPPTQQG 706
G PG P P + A + GQ PGP G Q PP G
Sbjct: 1406 GPPGDPGRNGLPGFDGAGGR--KGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1457
Score = 56.6 bits (135), Expect = 8e-08
Identities = 98/351 (27%), Positives = 113/351 (32%), Gaps = 81/351 (23%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQ-GNWGPPG-----GEMTFSIPTHKCGLVIGRGGENVKA 449
GPPGP G PG+P GQ G GPPG G+M F P G
Sbjct: 1003 GPPGPKGNPGLP--------GQPGLIGPPGLKGTIGDMGFPGPQGV------EGPPGPSG 1048
Query: 450 INQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDH-------AKQLIEEKIEGPLCPV 502
+ Q G+ + Q GDP + G P I+ + P P
Sbjct: 1049 VPGQPGS-PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPG 1107
Query: 503 GPG-------------PGGPGPAGPMG----PFNPG-PFNQGPPGAPPHAG--GPPPHQY 542
PG PG PGP GP G P NPG P GP G H G GPP +
Sbjct: 1108 LPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKG 1167
Query: 543 PPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPP 602
P G P Q P P +P S Q+ G +PG P P
Sbjct: 1168 KPGQDGIPGPAGQKGEPGQP-----GFGNPGPPGLPGLSG--QKGDGGLPGIPGNPGLPG 1220
Query: 603 AQGEP-------PQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQ 655
+GEP Q PP A E G Q PG P Q
Sbjct: 1221 PKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQ-GPPGRPGFQGLP---------- 1269
Query: 656 AQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQG 706
GP PPG + + Q G PG G Q PP QG
Sbjct: 1270 -------GPEGPPGLPGNGGIKGEKGNPGQPGLPG-LPGLKGDQGPPGLQG 1312
Score = 52.4 bits (124), Expect = 1e-06
Identities = 89/340 (26%), Positives = 105/340 (30%), Gaps = 97/340 (28%)
Query: 396 GPPGPPGGPGMP--------PGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENV 447
GP GPPG PG+P PG +G G GPPG IP GR G V
Sbjct: 872 GPIGPPGSPGLPGKAGASGFPGTKGE---MGMMGPPGPPGPLGIP--------GRSG--V 918
Query: 448 KAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGP--G 505
+ G ++G P + GP G
Sbjct: 919 PGLKGDDG---------------------LQGQP------------GLPGPTGEKGSKGE 945
Query: 506 PGGPGPAGPMGPFNPGPFNQ-GPPGAP--PHAGGPPPHQYPPQGWGNTYPQWQP--PAPH 560
PG PGP GPM P G + G PG P P GP +Q P G QP P P
Sbjct: 946 PGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPP 1005
Query: 561 DPSKAAAAAADPNAAWAAYYSHYYQQP--PGP-----VPGPAPAPAAPPAQGEPPQPPPT 613
P P PGP PGP+ P P + G P Q
Sbjct: 1006 GPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 614 GQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAP--PGS- 670
G + +P PG P + V G PG P PG+
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGI----------KGSVGDPGLPGLPGTPGAK 1115
Query: 671 -QPDYSAAWAEYYRQQAAYYGQTPGPGGPQ---PPPTQQG 706
QP + TPGP GP+ PP G
Sbjct: 1116 GQPGLPG------------FPGTPGPPGPKGISGPPGNPG 1143
Score = 47.0 bits (110), Expect = 6e-05
Identities = 95/358 (26%), Positives = 114/358 (31%), Gaps = 72/358 (20%)
Query: 365 GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGP-- 422
GP I + G P ++ S GP G PG PG PPG +G G GP
Sbjct: 147 GPPGIPGMKGEP----------GSIIMSSLPGPKGNPGYPG-PPGIQGLPGPTGIPGPIG 195
Query: 423 PGGEMTFSIPTHKCGLVIGRG--GENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGS 480
P G P GL +G G N + + G E Q PP G
Sbjct: 196 PPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKG---EQGLQGPP------------GP 240
Query: 481 PQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPH 540
P QI K+ I+ + + + G PGP G GP PGP G G G P
Sbjct: 241 PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGP--PGP-PGGEKGEKGEQGEPGKR 297
Query: 541 QYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAA 600
P + N P P P DP D PPGP P P
Sbjct: 298 GKPGKDGENGQP-GIPGLPGDPGYPGEPGRDGEKGQKGDTG-----PPGPPGLVIPRPGT 351
Query: 601 PPAQGE------PPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYK- 653
GE P P G E + I P PG P +
Sbjct: 352 GITIGEKGNIGLPGLPGEKG--------ERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPG 403
Query: 654 KQAQVATGGGPG----APPG--SQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQ 705
++ Q G PG PPG QP A PGP GP PP+ +
Sbjct: 404 ERGQKGDEGPPGISIPGPPGLDGQPG------------APGLPGPPGPAGPHIPPSDE 449
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/66 (43%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA------GDRGGGGPGG--GGPGGGSAGGPSQPP 62
PG P P G G G G PPGPPG+ G +G GP G G PG GP PP
Sbjct: 1216 PGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPP 1275
Query: 63 GGGGPG 68
G G G
Sbjct: 1276 GLPGNG 1281
Score = 45.1 bits (105), Expect = 2e-04
Identities = 28/63 (44%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGI 69
PGPP P G G G G PPG G GD G GP G G +G P QP G PG
Sbjct: 1002 PGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQ 1061
Query: 70 RKD 72
+ D
Sbjct: 1062 KGD 1064
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/76 (43%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 8 GPP-----PGPPPPAGGGGGAGGAGGGPPPGPPG-------AGDRG-GGGPGGGGPGGGS 54
GPP PG P P GGGG G G G PG AG +G G PG G PG
Sbjct: 1137 GPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPG 1196
Query: 55 AGGPSQPPGGGG-PGI 69
G S G GG PGI
Sbjct: 1197 LPGLSGQKGDGGLPGI 1212
Score = 44.7 bits (104), Expect = 3e-04
Identities = 30/69 (43%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 6 TGGPP-----PGPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGGGSAGGPS 59
T GPP GPP G G G GGG PG PG G++G G G G G P
Sbjct: 1126 TPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG 1185
Query: 60 QPPGGGGPG 68
Q PG G PG
Sbjct: 1186 Q-PGFGNPG 1193
Score = 44.3 bits (103), Expect = 4e-04
Identities = 30/69 (43%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 10 PPGPPPPAGGG--GGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQPPG 63
PPGPP G G G G PPG PG G G PG G GG G G P QP
Sbjct: 1236 PPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGL 1295
Query: 64 GGGPGIRKD 72
G PG++ D
Sbjct: 1296 PGLPGLKGD 1304
Score = 43.5 bits (101), Expect = 7e-04
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 11/76 (14%)
Query: 8 GPP----PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
GPP PGPP G G G G PPG PG + G G G GP PPG
Sbjct: 849 GPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPG 908
Query: 64 -------GGGPGIRKD 72
G PG++ D
Sbjct: 909 PLGIPGRSGVPGLKGD 924
Score = 42.7 bits (99), Expect = 0.001
Identities = 61/216 (28%), Positives = 78/216 (36%), Gaps = 51/216 (23%)
Query: 504 PG-PGGPGPAGPMGPFN----------PGPFN-QGP------------PGAPPHAGGPPP 539
PG PG PGP GP GP PGP +GP PG P H G P P
Sbjct: 59 PGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGP 118
Query: 540 HQYP-----------PQGWGNTYPQWQPPAPHDPS-KAAAAAADPNAAWAAYYSHYYQQP 587
P P G Q P P P K + ++ + Y P
Sbjct: 119 QGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGP 178
Query: 588 PG--------PVPGPAPAPAAPPAQGEPPQPP--PTGQSDYTKAWEEYYKKIGQQPQQ-- 635
PG +PGP P PP PP PP P + + ++ + G+Q Q
Sbjct: 179 PGIQGLPGPTGIPGPI-GPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGP 237
Query: 636 PGAPPQ-QDYTKAWEEYYKKQAQVATGG-GPGAPPG 669
PG P Q + + + ++K Q G GP PPG
Sbjct: 238 PGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPG 273
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/75 (42%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 12 GPPPPAGGGGGAG--GAGGGPPPGPPG-AGDRGGGG-------PGGGGPGG-----GSAG 56
G P PAG G G G G PPG PG +G +G GG PG GP G G G
Sbjct: 1173 GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPG 1232
Query: 57 --GPSQPPGGGGPGI 69
GP PPG GP +
Sbjct: 1233 VQGPPGPPGSPGPAL 1247
Score = 41.6 bits (96), Expect = 0.003
Identities = 67/244 (27%), Positives = 76/244 (31%), Gaps = 46/244 (18%)
Query: 396 GPPGPPGGPGMPPGGRGRGRGQGNWGPPG--GEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
GPPGPPG PG P G G GPPG G P GL G GG + N
Sbjct: 1235 GPPGPPGSPG--PALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLP-GNGGIKGEKGNPG 1291
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEG-PLCPVGPGPGG---- 508
+ G P ++G+P + + + G P P GP G
Sbjct: 1292 QPGLPGLPGLKGDQGPPG-----LQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGS 1346
Query: 509 ------------PGPAGPMGPFNPGPF---NQGPPGAPPHAG--GPPPHQYPPQGWGNTY 551
PGP G GP + GPPG P G G P Q P G T
Sbjct: 1347 AGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTG 1406
Query: 552 PQWQPPAPHDP--SKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQ 609
P P P A DP P P P P PP
Sbjct: 1407 PPGDPGRNGLPGFDGAGGRKGDPGL------------PGQPGTRGLDGPPGPDGLQGPPG 1454
Query: 610 PPPT 613
PP T
Sbjct: 1455 PPGT 1458
Score = 41.2 bits (95), Expect = 0.003
Identities = 28/62 (45%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGG-PGGGGP--GGGSAGGPSQPPGGGG 66
PG P G G G G PPGP G +G G G PG GP GGG G P P G
Sbjct: 1109 PGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK 1168
Query: 67 PG 68
PG
Sbjct: 1169 PG 1170
Score = 41.2 bits (95), Expect = 0.003
Identities = 28/68 (41%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPG----GGSAGGPSQPP 62
P GPP G GG G G PG PG G +G GP G G PG G G P P
Sbjct: 1271 PEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPG 1330
Query: 63 GGGGPGIR 70
G PG++
Sbjct: 1331 VPGFPGMK 1338
Score = 40.8 bits (94), Expect = 0.004
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGP------PGAGDRGGGG----PGGGGPGG--GSAGGP 58
PG P P G G G G PPGP G++G G PG GP G G G P
Sbjct: 931 PGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDP 990
Query: 59 SQPPGGGGPGI 69
QP G PG+
Sbjct: 991 GQPGLSGQPGL 1001
Score = 40.4 bits (93), Expect = 0.006
Identities = 31/73 (42%), Positives = 32/73 (43%), Gaps = 19/73 (26%)
Query: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPPG----AGDRGGGGPGG----GGPG-GGSAGGP 58
GPP P PP GA PPGPPG G +G GP G G PG G G P
Sbjct: 380 GPPGLPGPP--------GAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAP 431
Query: 59 S--QPPGGGGPGI 69
PPG GP I
Sbjct: 432 GLPGPPGPAGPHI 444
Score = 40.4 bits (93), Expect = 0.006
Identities = 32/78 (41%), Positives = 33/78 (42%), Gaps = 19/78 (24%)
Query: 8 GPPP----GPPPPAGGGGGAGGAGG-GPP----PGPPGAGDRGG--GGPGGGGPGGG--- 53
GPP GPP P G G G G GPP PGPPG + G G PG GP G
Sbjct: 386 GPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIP 445
Query: 54 -----SAGGPSQPPGGGG 66
GP PPG G
Sbjct: 446 PSDEICEPGPPGPPGSPG 463
Score = 40.0 bits (92), Expect = 0.007
Identities = 32/71 (45%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 8 GPPP-GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRG-----GGGPG-GGGPG-GGSAGGP 58
GPP GPP P G G G AG PG PG GD G G PG G PG G G P
Sbjct: 621 GPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLP 680
Query: 59 SQPPGGGGPGI 69
P G PG+
Sbjct: 681 GDPGLPGQPGL 691
Score = 38.1 bits (87), Expect = 0.028
Identities = 31/72 (43%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 3 DYSTGGPP--PGPP--PPAGGGGGAGGAGGGPPPGPPGA-GDRGGGGPGG--GGPGGGSA 55
D G P PG P P G G G G PGPPG G G GP G G PG
Sbjct: 676 DVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGL 735
Query: 56 GGPSQPPGGGGP 67
GP PPG GP
Sbjct: 736 EGPPGPPGFPGP 747
Score = 38.1 bits (87), Expect = 0.028
Identities = 34/87 (39%), Positives = 35/87 (40%), Gaps = 27/87 (31%)
Query: 7 GGPPPGPPPPAGGGGGAGGAGGGP----------PPGPPG-------------AGDRG-G 42
G P P PP + G G GA G P PPGPPG GD G
Sbjct: 869 GAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQ 928
Query: 43 GGPGGGGPGG--GSAGGPSQPPGGGGP 67
G PG GP G GS G P PG GP
Sbjct: 929 GQPGLPGPTGEKGSKGEPGL-PGPPGP 954
Score = 37.7 bits (86), Expect = 0.037
Identities = 29/65 (44%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGG--GSAGGPSQPPG 63
GPP PG P G G G G P GPPG R G PG G GG G G P QP
Sbjct: 1379 GPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL-PGFDGAGGRKGDPGLPGQPGT 1437
Query: 64 GGGPG 68
G G
Sbjct: 1438 RGLDG 1442
Score = 37.7 bits (86), Expect = 0.037
Identities = 27/60 (45%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 10 PPGPPPPAGGGG-----GAGGAGGGPP-PGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
P GPP G G GAGG G P PG PG RG GP PG GP PPG
Sbjct: 1404 PTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT--RGLDGP----PGPDGLQGPPGPPG 1457
Score = 37.0 bits (84), Expect = 0.063
Identities = 27/65 (41%), Positives = 28/65 (43%), Gaps = 10/65 (15%)
Query: 10 PPGPPPPAGGGGGA----GGAGGGPPPGPPGAGDRGGGGPGGGGPGG--GSAGGPSQPPG 63
PPGPP G G + G AG PG PG G PG GP G G G P P
Sbjct: 1358 PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLK----GLPGPQGPQGLPGPTGPPGDPGR 1413
Query: 64 GGGPG 68
G PG
Sbjct: 1414 NGLPG 1418
Score = 36.6 bits (83), Expect = 0.083
Identities = 29/64 (45%), Positives = 30/64 (46%), Gaps = 15/64 (23%)
Query: 6 TGGPPP-GPPPPAGGGGGAGGAGGGPPPGPPG-AGDRGGGGPGGGGPGG--GSAG--GPS 59
TG P P GPP P G G PPGPPG G +G G GP G G G GP
Sbjct: 188 TGIPGPIGPPGPPGLMG---------PPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPP 238
Query: 60 QPPG 63
PPG
Sbjct: 239 GPPG 242
Score = 36.6 bits (83), Expect = 0.083
Identities = 27/63 (42%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQP--PGG 64
PG P G G G G PG PGA + G G PG GP G G +G P P PG
Sbjct: 1088 PGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGE 1147
Query: 65 GGP 67
GP
Sbjct: 1148 PGP 1150
Score = 36.6 bits (83), Expect = 0.083
Identities = 45/170 (26%), Positives = 53/170 (31%), Gaps = 64/170 (37%)
Query: 365 GPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMP--PGGRGRGRGQGNWGP 422
GPE ++GPP ++ +GPPG PG PG+ PG +G G GP
Sbjct: 1348 GPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGP 1407
Query: 423 PGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQ 482
PG +P G GG GDP
Sbjct: 1408 PGDPGRNGLPGFD-----GAGGR---------------------KGDPGL---------- 1431
Query: 483 QIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFN-QGPPGAP 531
PG PG G GP PGP QGPPG P
Sbjct: 1432 -----------------------PGQPGTRGLDGP--PGPDGLQGPPGPP 1456
Score = 36.2 bits (82), Expect = 0.11
Identities = 29/67 (43%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 8 GPPPGPPP--PAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPGGGG-PGGGSAGGPSQPP 62
GP P P P G G G G PPG PG G G G PG G PG G PP
Sbjct: 1249 GPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPP 1308
Query: 63 G-GGGPG 68
G G PG
Sbjct: 1309 GLQGNPG 1315
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/78 (39%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 10 PPGPPPPAG------GGGGAGGAGGGP-------PPGPPGAGDRGG--GGPGGGG-PGGG 53
PPG P P+G G G G G P P GP G G G PG G PG
Sbjct: 1361 PPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFD 1420
Query: 54 SAGGPSQPPG-GGGPGIR 70
AGG PG G PG R
Sbjct: 1421 GAGGRKGDPGLPGQPGTR 1438
Score = 35.8 bits (81), Expect = 0.14
Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGG--GGPG-GGGPGGGSAGGPSQPPGGGGP 67
PGP P G G G G G PG GG G PG G PG GP P G GP
Sbjct: 1393 PGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGP 1452
Score = 35.4 bits (80), Expect = 0.18
Identities = 31/79 (39%), Positives = 31/79 (39%), Gaps = 18/79 (22%)
Query: 3 DYSTGGPPP--GPPPPAGGGGGAGGAGGGP-------------PPGPPGA-GDRG-GGGP 45
D GPP GPP P GG G G G P PG PG GD G G P
Sbjct: 265 DRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEP 324
Query: 46 GGGGPGGGSAG-GPSQPPG 63
G G G GP PPG
Sbjct: 325 GRDGEKGQKGDTGPPGPPG 343
Score = 35.0 bits (79), Expect = 0.24
Identities = 29/71 (40%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
Query: 8 GPP--PGPPPPAGGGGGAGGAGGGPPPGPPG-------AGDRGGGG-PGGGGPGGGSAGG 57
GPP PG P G G G G G PPGP G AG+ G G PG G G +
Sbjct: 603 GPPGNPGLPGLPGNIGPMGPPGFG-PPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQ 661
Query: 58 PSQPPGGGGPG 68
P +P G PG
Sbjct: 662 PGKPGLPGNPG 672
Score = 34.3 bits (77), Expect = 0.41
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 12 GPPPPAGGGGGAGGAGGGPPPGPPGA----GDRGGGGPGGGGPGG--GSAGGPSQPPGGG 65
G P P G G G +G PG PG GD+G G G G G G P P G
Sbjct: 1033 GFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPG 1092
Query: 66 GPGIR 70
PGI+
Sbjct: 1093 NPGIK 1097
Score = 33.9 bits (76), Expect = 0.54
Identities = 29/78 (37%), Positives = 32/78 (41%), Gaps = 18/78 (23%)
Query: 11 PGPPPPAGGG--GGAGGAGGGPPPGPPGA----------GDRG----GGGPGGGGPGG-- 52
PGPP P G G G PG PG GD G G PG GP G
Sbjct: 949 PGPPGPMDPNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPK 1008
Query: 53 GSAGGPSQPPGGGGPGIR 70
G+ G P QP G PG++
Sbjct: 1009 GNPGLPGQPGLIGPPGLK 1026
Score = 33.9 bits (76), Expect = 0.54
Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 11 PGPP--PPAGGGGGAGGAGGGPP-PGPPGAGDRGG--GGPG-GGGPGGGSAGGPSQPPGG 64
PGPP P G G GG G P PG PG G G PG G PG + GP+
Sbjct: 1192 PGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPK 1251
Query: 65 GGPG 68
G PG
Sbjct: 1252 GNPG 1255
Score = 33.5 bits (75), Expect = 0.70
Identities = 34/89 (38%), Positives = 35/89 (39%), Gaps = 28/89 (31%)
Query: 8 GPP--------PGPPPPAG--------GGGGAGGAGGGPP-PGPPGA----GDRGGGG-- 44
GPP PGPP G G GA G G P PG PGA G +G G
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDI 550
Query: 45 ---PGGGGPGG--GSAGGPSQPPGGGGPG 68
PG G G GS G P P G PG
Sbjct: 551 LTFPGMKGDKGELGSPGAPGLPGLPGTPG 579
Score = 33.5 bits (75), Expect = 0.70
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 10 PPGPPPPAGGGGGAGGAG-GGPP-----PGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63
PPG G G G G GPP PG PG+ G G PG S G P P
Sbjct: 1022 PPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGP 1081
Query: 64 GGGPGI 69
G PG+
Sbjct: 1082 KGEPGL 1087
Score = 33.1 bits (74), Expect = 0.92
Identities = 28/81 (34%), Positives = 31/81 (38%), Gaps = 21/81 (25%)
Query: 11 PGPPPPAGGGGGAGGAGGGPPPGPPGA-GDRGGGG------PGGGGPGG----------- 52
PGP G G +G G PG PG GD+G G PG GP G
Sbjct: 1035 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNP 1094
Query: 53 ---GSAGGPSQPPGGGGPGIR 70
GS G P P G PG +
Sbjct: 1095 GIKGSVGDPGLPGLPGTPGAK 1115
Score = 32.3 bits (72), Expect = 1.6
Identities = 21/58 (36%), Positives = 21/58 (36%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGP 67
P G P G G G G PG PG G G PG GP P G GP
Sbjct: 1081 PKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGP 1138
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPG----AGDRGG-GGPGGGGPGG-------GSAGG 57
PPGP G G G G G PG G++G G PG GP G GS G
Sbjct: 906 PPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGE 965
Query: 58 PSQPPGGGGPGI 69
+P G PG+
Sbjct: 966 KGEPGLPGIPGV 977
Score = 30.4 bits (67), Expect = 5.9
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 11 PGPPPPAGGGGGAGGAGGGPP--PGPPGAGDRGG--GGPGGGGPGG--GSAGGPSQPPGG 64
PG P G G G + G P PGP G G G PG G G G G P P
Sbjct: 1056 PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAK 1115
Query: 65 GGPGI 69
G PG+
Sbjct: 1116 GQPGL 1120
>gi|64085377 insulin-like growth factor 2 mRNA binding protein 2
isoform a [Homo sapiens]
Length = 599
Score = 72.8 bits (177), Expect = 1e-12
Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 75/350 (21%)
Query: 187 LPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAG 246
+P+ VS P+ Q+ D SR +G PG + Q I++P G
Sbjct: 155 IPDEEVSSPSPPQRAQRG-----DHSSREQGHAPG---GTSQARQIDFPLRILVPTQFVG 206
Query: 247 LVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL-RE 305
+IGK G TIK + ++ ++ + + + +KP+ I P +AC M+++I+ +E
Sbjct: 207 AIIGKEGLTIKNITKQTQSRVDIHRKENSGA-AEKPVTIHATPEGTSEACRMILEIMQKE 265
Query: 306 RDQGGFGDRNEYGSRIGGGIDVPVPRHS--VGVVIGRSGEMIKKIQNDAGVRIQFK--QD 361
D+ +++ I + + H+ VG +IG+ G +KKI+++ G +I QD
Sbjct: 266 ADE----------TKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQD 315
Query: 362 DGT-GPEKIAHIMGPPDRCEHAARII---------NDLLQ-------------------- 391
PE+ + G + C A I ND+L
Sbjct: 316 LSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFS 375
Query: 392 ---SLRSGPPGPPGGPGMPP--------GGRGRGRGQGNWGP-------PGGE-MTFSIP 432
S+ S P GP G P P G +GP P E + IP
Sbjct: 376 TGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIP 435
Query: 433 THKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQ 482
T G +IG+ G ++K + + GA ++I+ P D + ++ II G P+
Sbjct: 436 TQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPE 483
Score = 71.2 bits (173), Expect = 3e-12
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 133 QLGPI---HPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSG-GLP 188
Q GP H P + + +P VG IIG+ G I ++ + +G ++I+P G +
Sbjct: 414 QFGPFPHHHSYPEQEIVNLF-IPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS 472
Query: 189 ERSVSLTGAPESVQKAK-MMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGL 247
ER V +TG PE+ KA+ + + P + A+ I +P+ AG
Sbjct: 473 ERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAH---------IRVPSSTAGR 523
Query: 248 VIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERD 307
VIGKGG+T+ +LQ ++I+ +D + + N + +RIIG + Q A + +I+++
Sbjct: 524 VIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVK 583
Query: 308 Q 308
Q
Sbjct: 584 Q 584
Score = 52.8 bits (125), Expect = 1e-06
Identities = 78/318 (24%), Positives = 126/318 (39%), Gaps = 75/318 (23%)
Query: 153 DGMVGLIIGRGGEQINKIQQDSGCKVQIS---PDSGGLPERSVSLTGAPESVQKAKMMLD 209
+G+VG +IG+ G + KI+ ++G K+ IS S PER++++ G E+ A++ +
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEIM 342
Query: 210 -----------------------------DIVSRG----------RGGPP---------- 220
I S G RG PP
Sbjct: 343 KKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTH 402
Query: 221 -GQFHDNANGGQNGTV--------QEIM---IPAGKAGLVIGKGGETIKQLQERAGVKMI 268
G F Q G QEI+ IP G +IGK G IKQL AG +
Sbjct: 403 SGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIK 462
Query: 269 LIQDGSQNTNVDKPLRIIGDPYKVQ-QACEMVMDILRERDQGGFGDRNEYGSRIGGGIDV 327
+ ++ +V + + II P + Q +A + L+E + F + E + +
Sbjct: 463 IAP--AEGPDVSERMVIITGPPEAQFKAQGRIFGKLKE--ENFFNPKEE----VKLEAHI 514
Query: 328 PVPRHSVGVVIGRSGEMIKKIQN--DAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
VP + G VIG+ G+ + ++QN A V + Q E I I+G + A R
Sbjct: 515 RVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRK 574
Query: 386 INDLLQSLRSGPPGPPGG 403
I +++Q ++ P G
Sbjct: 575 IREIVQQVKQQEQKYPQG 592
Score = 50.1 bits (118), Expect = 7e-06
Identities = 68/285 (23%), Positives = 102/285 (35%), Gaps = 68/285 (23%)
Query: 305 ERDQGGFGDRNEYGSRIGGG-----IDVP----VPRHSVGVVIGRSGEMIKKIQNDAGVR 355
+R Q G E G GG ID P VP VG +IG+ G IK I R
Sbjct: 167 QRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSR 226
Query: 356 IQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRG 414
+ + + +G EK I P+ A R+I +++Q
Sbjct: 227 VDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQK---------------------- 264
Query: 415 RGQGNWGPPGGEMTFSIPTHK--CGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNF 472
+ + E+ I H G +IG+ G N+K I +TG + IS +
Sbjct: 265 --EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 473 KLFIIRGSPQQIDHAK----QLIEEKIEGPLCPVG------PG----------------- 505
+ ++G+ + A+ + + E E + V PG
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLS 382
Query: 506 -PGGPGPAGPMGPFNPGPFNQGPPGA--PPHAGGPPP--HQYPPQ 545
P GP A P P++P + G + P H GP P H YP Q
Sbjct: 383 PPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQ 427
Score = 42.7 bits (99), Expect = 0.001
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTG-PEKIAHIMGPPD-RCEHA 382
+++ +P +VG +IG+ G IK++ AG I+ +G E++ I GPP+ + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ 489
Query: 383 ARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFS----IPTHKCGL 438
RI L + N+ P E+ +P+ G
Sbjct: 490 GRIFGKLKEE--------------------------NFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 439 VIGRGGENVKAINQQTGAFVEISRQLPPN 467
VIG+GG+ V + T A V + R P+
Sbjct: 524 VIGKGGKTVNELQNLTSAEVIVPRDQTPD 552
Score = 33.1 bits (74), Expect = 0.92
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 401 PGGPGMPPGGRGRGRGQGNWGPPGGE---------MTFSIPTHKCGLVIGRGGENVKAIN 451
P P G R QG+ PGG + +PT G +IG+ G +K I
Sbjct: 163 PSPPQRAQRGDHSSREQGH--APGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNIT 220
Query: 452 QQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEE 493
+QT + V+I R+ N K I +P+ A ++I E
Sbjct: 221 KQTQSRVDIHRK--ENSGAAEKPVTIHATPEGTSEACRMILE 260
>gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens]
Length = 318
Score = 72.8 bits (177), Expect = 1e-12
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 58/341 (17%)
Query: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
VG IIG+ GE + K++++SG ++ IS G PER ++L G ++ KA M+ D +
Sbjct: 25 VGSIIGKKGESVKKMREESGARINIS--EGNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 83 ISS---SMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
Query: 276 NTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPV-PRHSV 334
N + ++ + I G P + + + + ++ E G+ +P P+ S
Sbjct: 140 N-STERAITIAGIPQSIIECVKQICVVMLESPP--------------KGVTIPYRPKPSS 184
Query: 335 GVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLR 394
VI G+ IQ + Q D T ++A +
Sbjct: 185 SPVIFAGGQAY-TIQGQYAI----PQPDLTKLHQLA---------------------MQQ 218
Query: 395 SGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 454
S P G G G + + E+T IP G +IGR G + I Q +
Sbjct: 219 SHFPMTHGNTGFSAGLDASAQTTSH------ELT--IPNDLIGCIIGRQGAKINEIRQMS 270
Query: 455 GAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
GA ++I+ + + D + I GS I A+ LI ++
Sbjct: 271 GAQIKIANPVEGSTD---RQVTITGSAASISLAQYLINVRL 308
Score = 69.7 bits (169), Expect = 9e-12
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
VG +IG+ GE +KK++ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE--GNCPERIITLAGPTNAIFKAFAMIIDKLEED 82
Query: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
S PP + +P +CG +IG+GG +K I +
Sbjct: 83 ISSSMTNSTAASRPPV----------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQ-IDHAKQLIEEKIEGPLCPVGPGPGGPGPA 512
TGA V+++ + PN + I G PQ I+ KQ+ +E P P
Sbjct: 127 TGAQVQVAGDMLPNSTE--RAITIAGIPQSIIECVKQICVVMLESP------------PK 172
Query: 513 GPMGPFNPGP 522
G P+ P P
Sbjct: 173 GVTIPYRPKP 182
Score = 53.1 bits (126), Expect = 9e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205
+ E +P+ ++G IIGR G +IN+I+Q SG +++I+ G +R V++TG+ S+ A+
Sbjct: 242 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 301
Query: 206 MMLDDIVSRGRGG 218
+++ +S GG
Sbjct: 302 YLINVRLSSETGG 314
Score = 43.1 bits (100), Expect = 9e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
+ ISS + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 81 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
Query: 188 P---ERSVSLTGAPESV 201
P ER++++ G P+S+
Sbjct: 139 PNSTERAITIAGIPQSI 155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.139 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,572,903
Number of Sequences: 37866
Number of extensions: 4200814
Number of successful extensions: 104053
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 1503
Number of HSP's that attempted gapping in prelim test: 23899
Number of HSP's gapped (non-prelim): 36176
length of query: 711
length of database: 18,247,518
effective HSP length: 109
effective length of query: 602
effective length of database: 14,120,124
effective search space: 8500314648
effective search space used: 8500314648
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.