KHSRP 5581

Name: KHSRP	Sequence: fasta or formatted (711aa)		NCBI GI: 154355000
Description: KH-type splicing regulatory protein		Referenced in: RNA Polymerase and General Transcription Factors Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 59 6 C cysteine 0.7 5 1 D aspartate 4.8 34 2 E glutamate 3.9 28 2 F phenylalanine 1.7 12 1 G glycine 18.6 132 5 H histidine 1.5 11 1 I isoleucine 5.6 40 2 K lysine 4.4 31 2 L leucine 2.8 20 2 M methionine 2.0 14 2 N asparagine 2.8 20 2 P proline 14.8 105 4 Q glutamine 8.9 63 3 R arginine 4.2 30 1 S serine 4.5 32 2 T threonine 3.0 21 2 V valine 3.7 26 2 W tryptophan 1.0 7 1 Y tyrosine 3.0 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 KH-type splicing regulatory protein FUBP1 0.519 far upstream element-binding protein FUBP3 0.342 far upstream element (FUSE) binding protein 3 [Homo... COL5A1 0.041 alpha 1 type V collagen preproprotein PRB2 0.040 proline-rich protein BstNI subfamily 2 PCBP3 0.040 poly(rC) binding protein 3 isoform 1 COL11A1 0.040 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.040 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.040 alpha 1 type XI collagen isoform A preproprotein [Ho... COL11A2 0.040 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.040 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.040 collagen, type XI, alpha 2 isoform 1 preproprotein ... PCBP1 0.038 poly(rC) binding protein 1 COL1A1 0.037 alpha 1 type I collagen preproprotein PCBP2 0.037 poly(rC) binding protein 2 isoform d SFPQ 0.037 splicing factor proline/glutamine rich (polypyrimidin... COL5A2 0.037 alpha 2 type V collagen preproprotein PCBP2 0.037 poly(rC) binding protein 2 isoform e PCBP2 0.035 poly(rC) binding protein 2 isoform a PCBP3 0.035 poly(rC) binding protein 3 isoform 2 PCBP2 0.034 poly(rC) binding protein 2 isoform b IGF2BP2 0.034 insulin-like growth factor 2 mRNA binding protein 2 ... PCBP2 0.034 poly(rC) binding protein 2 isoform f PRB1 0.034 proline-rich protein BstNI subfamily 1 isoform 1 pre... PCBP2 0.034 poly(rC) binding protein 2 isoform c COL4A5 0.032 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.032 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.032 type IV collagen alpha 5 isoform 3 precursor IGF2BP2 0.032 insulin-like growth factor 2 mRNA binding protein 2 ... PCBP2 0.032 poly(rC) binding protein 2 isoform g Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.