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Search of human proteins with 153792764
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153792764 hypothetical protein LOC57624 [Homo sapiens]
(653 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153792764 hypothetical protein LOC57624 [Homo sapiens] 1327 0.0
gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens] 1241 0.0
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 357 2e-98
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 209 6e-54
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 63 1e-09
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 62 2e-09
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 60 5e-09
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 57 5e-08
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 57 5e-08
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 57 5e-08
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 57 7e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 56 9e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 2e-07
gi|55750053 atrophin-1 [Homo sapiens] 53 8e-07
gi|55750041 atrophin-1 [Homo sapiens] 53 8e-07
gi|189011568 adenomatous polyposis coli [Homo sapiens] 53 1e-06
gi|189011566 adenomatous polyposis coli [Homo sapiens] 53 1e-06
gi|53759122 adenomatous polyposis coli [Homo sapiens] 53 1e-06
gi|47132519 Ras association and pleckstrin homology domains 1 is... 53 1e-06
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 53 1e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 52 2e-06
gi|18079216 CASK interacting protein 1 [Homo sapiens] 52 2e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 51 3e-06
gi|151301154 mucin 6, gastric [Homo sapiens] 51 3e-06
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 51 4e-06
gi|146134388 YLP motif containing 1 [Homo sapiens] 51 4e-06
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 50 5e-06
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 50 5e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 49 1e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 49 2e-05
>gi|153792764 hypothetical protein LOC57624 [Homo sapiens]
Length = 653
Score = 1327 bits (3434), Expect = 0.0
Identities = 653/653 (100%), Positives = 653/653 (100%)
Query: 1 MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKE 60
MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKE
Sbjct: 1 MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKE 60
Query: 61 KNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQS 120
KNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQS
Sbjct: 61 KNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQS 120
Query: 121 LHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR 180
LHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR
Sbjct: 121 LHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR 180
Query: 181 PHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEE 240
PHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEE
Sbjct: 181 PHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEE 240
Query: 241 EEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPT 300
EEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPT
Sbjct: 241 EEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPT 300
Query: 301 VPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV 360
VPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV
Sbjct: 301 VPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV 360
Query: 361 TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL 420
TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL
Sbjct: 361 TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL 420
Query: 421 YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPV 480
YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPV
Sbjct: 421 YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPV 480
Query: 481 SQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK 540
SQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK
Sbjct: 481 SQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK 540
Query: 541 STEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSP 600
STEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSP
Sbjct: 541 STEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSP 600
Query: 601 TLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSSLANRD 653
TLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSSLANRD
Sbjct: 601 TLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSSLANRD 653
>gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens]
Length = 669
Score = 1241 bits (3210), Expect = 0.0
Identities = 617/652 (94%), Positives = 624/652 (95%), Gaps = 10/652 (1%)
Query: 1 MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKE 60
MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKE
Sbjct: 1 MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKE 60
Query: 61 KNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQS 120
KNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQS
Sbjct: 61 KNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQS 120
Query: 121 LHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR 180
LHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR
Sbjct: 121 LHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR 180
Query: 181 PHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEE 240
PHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEE
Sbjct: 181 PHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEE 240
Query: 241 EEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPT 300
EEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPT
Sbjct: 241 EEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPT 300
Query: 301 VPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV 360
VPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV
Sbjct: 301 VPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV 360
Query: 361 TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL 420
TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL
Sbjct: 361 TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL 420
Query: 421 YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPV 480
YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPV
Sbjct: 421 YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPV 480
Query: 481 SQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK 540
SQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK
Sbjct: 481 SQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK 540
Query: 541 STEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSP 600
STEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPG PVVTSRLGRCSVSP
Sbjct: 541 STEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGPPVVTSRLGRCSVSP 600
Query: 601 TLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSD-----LQQSQVPS 647
TLLAGNHSS+ + G G+ S + S D LQ +Q+P+
Sbjct: 601 TLLAGNHSSDLVLERNSG-----GGLDHESAWGSQDSQDVFQGALQDTQLPT 647
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 357 bits (916), Expect = 2e-98
Identities = 252/595 (42%), Positives = 324/595 (54%), Gaps = 71/595 (11%)
Query: 12 EEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEEA 71
E +++FLQ EDMG+K YD LVIQNASDIARENDRLR+E N Y KEK E R QEE
Sbjct: 1177 EVTSINSFLQNTEDMGLKTYDALVIQNASDIARENDRLRSEMNAPYHKEKLEVRNMQEEG 1236
Query: 72 IKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDS 131
KR + G +HF M++ A D L C G S+ S SLHSV DD S
Sbjct: 1237 SKRTDDKSGP--------RHFHPSSMSVCAAVDGLGQ-CLVGPSIWSPSLHSVFSMDDSS 1287
Query: 132 SCGS-RRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYS--K 188
S S R+QPPPKPKRDP+T+LS S E VS A S EA A+PRPHSD+YS K
Sbjct: 1288 SLPSPRKQPPPKPKRDPNTRLSASYEAVS---ACLSAAREAANEALARPRPHSDDYSTMK 1344
Query: 189 KIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQM-----------GSPAGD 237
KIPP KPKR+PNT+LS S++E + G R + ++ + +P GD
Sbjct: 1345 KIPPRKPKRSPNTKLSGSYEEISGSRPGDARPAGAPGAAARVLTPGTPQCALPPAAPPGD 1404
Query: 238 PEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCA 297
++ EPVYIEM+G+ R + D E+VYEEMK + DD G A H A
Sbjct: 1405 EDDSEPVYIEMLGHAARP---DSPDPGESVYEEMKCCLPDDGGPGAGSFLLHG------A 1455
Query: 298 TPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTP 357
+P P L A P G CDIPPPFPNLL HRPPLLVFPP PV CSP SDESPLTP
Sbjct: 1456 SP--PLLHRAPEDEAAGPPGDACDIPPPFPNLLPHRPPLLVFPPTPVTCSPASDESPLTP 1513
Query: 358 LEVTKLPVLE-NVSYMKQPAGASPSTLPSHVPGHAKLEK---EQAAALG----------- 402
LEV KLPVLE N+ Y QP G+SP + P ++K +K ++ A+ G
Sbjct: 1514 LEVKKLPVLETNLKYPVQPEGSSPLS-----PQYSKSQKGDGDRPASPGLALFNGSGRAS 1568
Query: 403 PASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKR--PPPYDAV 460
P S P P PP YR + +P P+PV+ G++ + P P A
Sbjct: 1569 PPSTPPPPPPPPGPPPAPYRPCAHLAFP----PEPAPVNAGKAGPSAEAPKVHPKPNSAP 1624
Query: 461 HSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSS 520
+G S S P +P+S + D K ++A +P SR +SPL+EL SLF+S
Sbjct: 1625 VAGPCS-SFPKIPYSPVKATRADARKAGSSASPPAPYSPPSSRPL--SSPLDELASLFNS 1681
Query: 521 GRSLLRKSSSGRRSKEPAEKSTEELKVRSH----STEPLPKLDNKERGHHGASSS 571
GRS+LRKS++GR+ +E AE + + S ++E + ++ +HG S
Sbjct: 1682 GRSVLRKSAAGRKIRE-AEGFETNMNISSRDDPSTSEITSETQDRNANNHGIQLS 1735
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 209 bits (532), Expect = 6e-54
Identities = 160/451 (35%), Positives = 206/451 (45%), Gaps = 95/451 (21%)
Query: 54 NLAYLKEKNEKRRRQEEAIKR-----------IGGEVGRG-----HEGSYVGKHFRMGFM 97
NL Y K K E R+ +EE KR G G+G + + + + RMGFM
Sbjct: 2 NLLYRKTKLEWRQHKEEEAKRSSSKEVAPAGSAGPAAGQGPGVRVRDIASLRRSLRMGFM 61
Query: 98 TMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDD------DSSCG-----SRRQPPPKPKRD 146
TMPA Q+ PHPC S + RS S HSVG D +S G S R+PP KP+R
Sbjct: 62 TMPASQEHTPHPCRSAMAPRSLSCHSVGSMDSVGGGPGGASGGLTEDSSTRRPPAKPRRH 121
Query: 147 PSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTS 206
PSTKLS S + P + S KP P E S+K+PP KP+R+PNTQLS S
Sbjct: 122 PSTKLSMVGP------GSGAETPPSKKAGSQKPTPEGRESSRKVPPQKPRRSPNTQLSVS 175
Query: 207 FDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPE---EEEPVYIEMVGNILRDFRK----- 258
FDE+ PR +LP L++ AGDP+ +EEPVYIEMVG++ R +
Sbjct: 176 FDESCPPGPSPRGGNLPL-QRLTRGSRVAGDPDVGAQEEPVYIEMVGDVFRGGGRSGGGL 234
Query: 259 -----------------EDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTV 301
D ++SEA+YEEMKYP+ ++ G+ + +S P
Sbjct: 235 AGPPLGGGGPTPPAGADSDSEESEAIYEEMKYPLPEEAGEGRANGPPPLTATSPPQQPHA 294
Query: 302 --PDLDFAKASV------PCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDES 353
P AS P K C+IPPPFPNLL HRPPLL FP A D
Sbjct: 295 LPPHAHRRPASALPSRRDGTPTKTTPCEIPPPFPNLLQHRPPLLAFPQAKSASRTPGD-- 352
Query: 354 PLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSS 413
V++LPVL + K+PAG++P A PA
Sbjct: 353 -----GVSRLPVL---CHSKEPAGSTP------------------APQVPARERETPPPP 386
Query: 414 PPPPSTLYRTQSPHGYPKSHSTSPSPVSMGR 444
PPPP+ P G +SHST P G+
Sbjct: 387 PPPPAANLLLLGPSGRARSHSTPLPPQGSGQ 417
Score = 55.5 bits (132), Expect = 2e-07
Identities = 104/398 (26%), Positives = 148/398 (37%), Gaps = 84/398 (21%)
Query: 290 HSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLL---------SHRPPL---- 336
HS +TP P + + P PP PPP NLL SH PL
Sbjct: 362 HSKEPAGSTPA-PQVPARERETPPPPP------PPPAANLLLLGPSGRARSHSTPLPPQG 414
Query: 337 -------LVFPPAPVHCSPNSDESPLTPLEVTKL----PVLENVSYMKQPAGASPST--- 382
P + P + +P P L P + VSY + +T
Sbjct: 415 SGQPRGERELPNSHSMICPKAAGAPAAPPAPAALLPGPPKDKAVSYTMVYSAVKVTTHSV 474
Query: 383 LPSHVP---GHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHG----------Y 429
LP+ P G K EKE + G SS PP P SPHG +
Sbjct: 475 LPAGPPLGAGEPKTEKEISVLHGMLCT----SSRPPVPGKT----SPHGGAMGAAAGVLH 526
Query: 430 PKSHSTSPS--PVSMGRSLTPL--------SLKRPPPYDAVHSGSLSRSSPSVPHSTPRP 479
+ SP P LTPL LKRPP Y+++ +G + V +P
Sbjct: 527 HRGCLASPHSLPDPTVGPLTPLWTYPATAAGLKRPPAYESLKAGGVLNKGCGVGAPSPMV 586
Query: 480 VSQ------DGAKMVNAAVNTYGAAPGGSRSRTPTSPLEEL-TSLFSSGRSLLRKSSSGR 532
Q DG + + A+ G TP EE+ + F +G +L RK G
Sbjct: 587 KIQLQEQGTDGGAFASISCAHVIASAG-----TPEEEEEEVGAATFGAGWALQRKVLYGG 641
Query: 533 RSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSR 592
R + +K + + + S E K++ ++R G +S PV++Q +G R
Sbjct: 642 RKAKELDKVEDGARAWNGSAEGPGKVEREDR---GPGTSGIPVRSQGAEGLLARIHHGDR 698
Query: 593 LGRCSVSP----TLLAGNHSSEPKVSCKLGRSASTSGV 626
G + P T A + + + +LGRSASTSGV
Sbjct: 699 GGSRTALPIPCQTFPACHRNGDFTGGYRLGRSASTSGV 736
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 62.8 bits (151), Expect = 1e-09
Identities = 135/608 (22%), Positives = 198/608 (32%), Gaps = 98/608 (16%)
Query: 100 PAPQDRLPH------PCSSGFSVRSQSLH--------------SVGGTDDDSSCGSRRQP 139
PAP LPH P +S FSV +Q H S G+ S G P
Sbjct: 514 PAPPP-LPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNSGSHSSSPAGPVSFP 572
Query: 140 PP------------------KPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR- 180
PP P+ P L+ + ++ ++ R S +PR
Sbjct: 573 PPPYLARSIDPLPRPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRV 632
Query: 181 --PHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDP 238
P + E PPP P + E + GPR P Q PA
Sbjct: 633 SFPKTPEVGPG-PPPGPLSKAPQPVPPGVGE--LPARGPRLFDFPPTPLEDQFEEPA--- 686
Query: 239 EEEEPVYIEMVGNILR----DFRKEDDDQSEAVYEEMKYPI---FDDLGQDAKCDFDHHS 291
E + + + NI++ RKE++ Q + P+ F L D +
Sbjct: 687 --EFKILPDGLANIMKMLDESIRKEEEQQQHEAGVAPQPPLKEPFASLQSPFPTDTAPTT 744
Query: 292 CSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSD 351
+ A T + K +PPP P L PP PP P SP S
Sbjct: 745 TAPAVAVTTTTTTTTTTTATQEEEKKPPPALPPP-PPLAKFPPPSQPQPPPPPPPSPAS- 802
Query: 352 ESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPG--HAKLEKEQAAALGPASATPA 409
L + VLE Y + GA+ ST P +P ++ A AL P SA P+
Sbjct: 803 ------LLKSLASVLEGQKYCYRGTGAAVSTRPGPLPTTQYSPGPPSGATALPPTSAAPS 856
Query: 410 LSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSS 469
SP P ++ S G P + + +TP + PPP + S S
Sbjct: 857 AQGSPQPSASSSSQFSTSGGPWARERRAGEEPVPGPMTP--TQPPPPLSLPPARSESEVL 914
Query: 470 PSVPHSTPRPVSQDGAKMVNAA--VNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRK 527
+ + V + G + A V+T A G+ P + +E +G
Sbjct: 915 EEISRACETLVERVGRSATDPADPVDTAEPADSGTERLLPPAQAKE-----EAGGVAAVS 969
Query: 528 SSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTP 587
S RR KE ++ + S P+ R KA+ P
Sbjct: 970 GSCKRRQKEHQKEHRRHRRACKDSVGRRPR------------EGRAKAKAK-------VP 1010
Query: 588 VVTSR--LGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQV 645
SR LG + + G S P + T+ PP + P Q + + V
Sbjct: 1011 KEKSRRVLGNLDLQSEEIQGREKSRPDLGGASKAKPPTAPAPPSAPAPSAQPTP-PSASV 1069
Query: 646 PSSLANRD 653
P A +
Sbjct: 1070 PGKKAREE 1077
Score = 34.7 bits (78), Expect = 0.28
Identities = 77/347 (22%), Positives = 109/347 (31%), Gaps = 51/347 (14%)
Query: 315 PKGLLCDIPPPFPNLLSHRPPLLVFPPA----PVHCSPNSDESPLT--------PLEVTK 362
P G PPP P LL RPP PPA P + D L P
Sbjct: 462 PPGPSSPPPPPCPRLL--RPPP---PPAWLKGPACRAAREDGEILEELFFGTEGPPRPAP 516
Query: 363 LPVLENVSYMKQPAGA-SPSTLPSHVP----------GHAKLEKEQAAALGPASATP--- 408
P+ ++ PA S T SH P ++ ++ GP S P
Sbjct: 517 PPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNSGSHSSSPAGPVSFPPPPY 576
Query: 409 ---ALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSL 465
++ P PPS Q P P + + P+P S T S +RP S
Sbjct: 577 LARSIDPLPRPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRP------ESPRP 630
Query: 466 SRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAP--GGSRSRTPTSPLEELTSLFSSGRS 523
S P P P P +K G P G P +PLE+ + +
Sbjct: 631 RVSFPKTPEVGPGPPPGPLSKAPQPVPPGVGELPARGPRLFDFPPTPLEDQFEEPAEFKI 690
Query: 524 LLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGT 583
L ++ + + + + EE + P P L +S + P D
Sbjct: 691 LPDGLANIMKMLDESIRKEEEQQQHEAGVAPQPPLKEP------FASLQSPFPT---DTA 741
Query: 584 PGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPS 630
P T + + + T E K L + PPPS
Sbjct: 742 PTTTAPAVAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPPPS 788
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 61.6 bits (148), Expect = 2e-09
Identities = 112/469 (23%), Positives = 179/469 (38%), Gaps = 56/469 (11%)
Query: 102 PQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSST 161
PQ L P SS FS SL S+ Q P ++ SS + SST
Sbjct: 439 PQSPLQIPVSSSFSYTLLSLFQSSPERTHSTFEGFPQSP--------LQIPVSSSSSSST 490
Query: 162 AASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFD--ETYIKKHGPRR 219
S +PE T+++ + P S + PP + Q+ S E + H +
Sbjct: 491 LLSLFQSSPECTQSTFEGFPQSPLQIPQSPPEGENTHSPLQIVPSLPEWEDSLSPHYFPQ 550
Query: 220 TSLPRDSSLSQMGSPAGDPEEEE-------PVYIEMVGNILRDFRKEDDDQSEAVYEEMK 272
+ + SLS P P+ E+ P + ++ + + Q E +
Sbjct: 551 SPPQGEDSLSPHYFPQSPPQGEDSLSPHYFPQSPQGEDSLSPHYFPQSPPQGEDSMSPLY 610
Query: 273 YPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSH 332
+P G++ + +TP+ F ++S PP+G P P
Sbjct: 611 FPQSPLQGEEFQSSLQSPVSICSSSTPSSLPQSFPESS-QSPPEG-----PVQSPLHSPQ 664
Query: 333 RPPLLVFPPAPVHCSPNS---DESPLTPLEVTKLPV-----LENVSYMKQPAGASPSTLP 384
PP + +P+ SP S E L+PL++ + P+ L ++ + + P S P
Sbjct: 665 SPPEGMHSQSPLQ-SPESAPEGEDSLSPLQIPQSPLEGEDSLSSLHFPQSPPEWEDSLSP 723
Query: 385 SHVPGH-AKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSP--SPVS 441
H P + E Q++ P S + +S P S +SP P+ + SP PVS
Sbjct: 724 LHFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSF---PESPQSPPEGPAQSPLQRPVS 780
Query: 442 MGRSLTPLSL-------KRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNT 494
S T SL + PP S L S P ST +SQ ++ V++
Sbjct: 781 SFFSYTLASLLQSSHESPQSPPEGPAQS-PLQSPVSSFPSSTSSSLSQ------SSPVSS 833
Query: 495 YGAAPGGSRSR-TPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKST 542
+ ++ S S+ +P SPL+ FSS SL S S P ++ T
Sbjct: 834 FPSSTSSSLSKSSPESPLQSPVISFSSSTSL---SPFSEESSSPVDEYT 879
Score = 32.0 bits (71), Expect = 1.8
Identities = 51/199 (25%), Positives = 73/199 (36%), Gaps = 48/199 (24%)
Query: 375 PAGASPSTLPSHVPGHAKLEKEQAAALGPASATPAL--SSSPPPPSTLYRTQSPHGYPKS 432
P PS L S E Q+ G S +P SSP TLY QSP +
Sbjct: 7 PTAGMPSLLQS------SSESPQSCPEGEDSQSPLQIPQSSPESDDTLYPLQSPQSRSEG 60
Query: 433 HSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAV 492
+S L+RPP G S+S +P S+P +G +
Sbjct: 61 EDSSD------------PLQRPP------EGKDSQSPLQIPQSSP-----EGDDTQSPLQ 97
Query: 493 NTYGAAPGGSRSRTP-------------TSPLEELTSLFSSGRSLLRKSSSGRRSKEPAE 539
N+ ++P G S +P SPL+ S F S L SS ++ P E
Sbjct: 98 NSQ-SSPEGKDSLSPLEISQSPPEGEDVQSPLQNPASSFFSSALLSIFQSSPESTQSPFE 156
Query: 540 ---KSTEELKVRSHSTEPL 555
+S ++ V + S+ L
Sbjct: 157 GFPQSVLQIPVSAASSSTL 175
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 60.5 bits (145), Expect = 5e-09
Identities = 153/613 (24%), Positives = 217/613 (35%), Gaps = 135/613 (22%)
Query: 100 PAPQDRLPHPCSSG--FSVRSQSLHSVGGTDDDSSCGSRRQPPPKP--KRDPSTKLSTSS 155
PAP R P P + G SV S S HS + S +RR+P +R S LS+S+
Sbjct: 192 PAPSAR-PRPPTEGPRKSVSSASEHST----TEPSPAARRRPSAGGGLQRPASRSLSSSA 246
Query: 156 ETVSSTAAS--KSGKTPERTEASAKPRPHSDEYSK--KIPPPKPKRNP------NTQLST 205
+SS A S + TP ++P+P + + ++ PP+ P ++ L+T
Sbjct: 247 TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 206 SFDETYIKKHGPRRT-SLPRDSSLS-QMGSPA--GDPEEEEPVYIEMVGNILRDFRKEDD 261
++ P + P SSL+ Q+ +P P P ++ + +
Sbjct: 307 PSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS------PPAT 360
Query: 262 DQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCD 321
S+A LG P L + +P PP L
Sbjct: 361 PPSQAT---------TSLGS--------------------PTLQATHSFLPSPPLSPLAT 391
Query: 322 IPPPFPNLLSHRPPLLV--FPPAPVHCSPNSDESPLTP--LEVTKL----------PVLE 367
PP P L+ PPL PPA SP + SP P L V L PV
Sbjct: 392 PPPQAPPALA-LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 450
Query: 368 NVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPS-------TL 420
S P + +T PS P Q PAS + S++PPP + L
Sbjct: 451 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 510
Query: 421 YRTQSPHGYPKSHSTSP--------------SPVSMGRSLTPLSLKRPPPY-DAVHSGSL 465
+ P P + +T P +P S SL L PPP V + L
Sbjct: 511 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 570
Query: 466 SRSSPSVPHSTP-----RPVSQDGAKMVNAAVNTYGAAPG--GSRSRTPTSPLEELTSLF 518
+ PS P S RP + V+ T APG SR+P+S L
Sbjct: 571 LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL------- 623
Query: 519 SSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTE----PLPKLDNKERGHHGASSSREP 574
SG L SSS A + EEL+ E P D + H A+ SR P
Sbjct: 624 -SGPDLAGHSSS-------ATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP 675
Query: 575 VKAQEWDGTPGTPV-------VTSRLGRCSV-------SPTLLAGNHSSEPKVSCKLGRS 620
+ G PG P+ S G C++ S T G P G++
Sbjct: 676 APPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKA 735
Query: 621 ASTSGVPPPSVTP 633
A+ +G S +P
Sbjct: 736 AAGAGAGASSRSP 748
Score = 47.0 bits (110), Expect = 6e-05
Identities = 88/374 (23%), Positives = 127/374 (33%), Gaps = 73/374 (19%)
Query: 327 PNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVS---YMKQPAGASPSTL 383
P LL+ RPP PP PV TP + L V ++ G +T+
Sbjct: 22 PGLLTPRPPGSPRPPPPV-----------TPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 384 PSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYP--KSHSTSPSP-- 439
P P ++ PAS PA P + P P S +T P P
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 440 -----VSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNT 494
+S ++ P A+ +G+ +S P TP P ++ V
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP-GTPSPAMARRSRAAGTEVGL 189
Query: 495 YGAAPGGSRSRTPTSPLEELTSLFSS------GRSLLRKSSSGRRSKEPAEKSTEEL--- 545
AP +R R PT + S S + R+ S+G + PA +S
Sbjct: 190 PRPAP-SARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 546 ---------------KVRSHSTEPLPKLDNKERGHHGASSSREP-VKAQEWDGTPGT-PV 588
+ +H ++P PK G + R P V D P P+
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPK---------GLQALRPPQVTPPRKDAAPALGPL 299
Query: 589 VTSRLGRCSVS--------PTLLAGNHSSEPKVSCKLGRS---ASTSGVPPPSVTPLRQS 637
+S L S S PTL A HSS ++C+L A S PPS+ L
Sbjct: 300 SSSPLATPSPSAALQSQAPPTLPATPHSS--SLTCQLATPLPLAPPSPSAPPSLQTLPSP 357
Query: 638 SDLQQSQVPSSLAN 651
SQ +SL +
Sbjct: 358 PATPPSQATTSLGS 371
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 57.0 bits (136), Expect = 5e-08
Identities = 148/604 (24%), Positives = 206/604 (34%), Gaps = 147/604 (24%)
Query: 100 PAPQDRLPHPCSSG--FSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTK---LSTS 154
PAP R P P + G SV S S HS +P P +R PS +
Sbjct: 183 PAPSAR-PRPPTEGPRKSVSSASEHST------------TEPSPAARRRPSAGGGLQRPA 229
Query: 155 SETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKK 214
S ++SS+A S +P R+ SA+ P + + + PKPK ++
Sbjct: 230 SRSLSSSATPLS--SPARSGPSARGTPRAPAHPSQ---PKPKG--------------LQA 270
Query: 215 HGPRRTSLPRDSSLSQMG----SPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEE 270
P + + PR + +G SP P P + +
Sbjct: 271 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAP----------------PSPSAPPSLQT 314
Query: 271 MKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLL 330
+ P Q ++ +PT L + +P PP L PP P L
Sbjct: 315 LPSPPATPPSQ----------ATTSLGSPT---LQATHSFLPSPPLSPLATPPPQAPPAL 361
Query: 331 SHRPPLLV--FPPAPVHCSPNSDESPLTP--LEVTKL----------PVLENVSYMKQPA 376
+ PPL PPA SP + SP P L V L PV S P
Sbjct: 362 A-LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 420
Query: 377 GASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPS-------TLYRTQSPHGY 429
+ +T PS P Q PAS + S++PPP + L + P
Sbjct: 421 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQA 480
Query: 430 PKSHSTSP--------------SPVSMGRSLTPLSLKRPPPY-DAVHSGSLSRSSPSVPH 474
P + +T P +P S SL L PPP V + L + PS P
Sbjct: 481 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA 540
Query: 475 STP-----RPVSQDGAKMVNAAVNTYGAAPG--GSRSRTPTSPLEELTSLFSSGRSLLRK 527
S RP + V+ T APG SR+P+S L SG L
Sbjct: 541 SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL--------SGPDLAGH 592
Query: 528 SSSGRRSKEPAEKSTEELKVRSHSTE----PLPKLDNKERGHHGASSSREPVKAQEWDGT 583
SSS A + EEL+ E P D + H A+ SR P + G
Sbjct: 593 SSS-------ATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGA 645
Query: 584 PGTPV-------VTSRLGRCSV-------SPTLLAGNHSSEPKVSCKLGRSASTSGVPPP 629
PG P+ S G C++ S T G P G++A+ +G
Sbjct: 646 PGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGAS 705
Query: 630 SVTP 633
S +P
Sbjct: 706 SRSP 709
Score = 41.6 bits (96), Expect = 0.002
Identities = 81/336 (24%), Positives = 119/336 (35%), Gaps = 54/336 (16%)
Query: 327 PNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVS---YMKQPAGASPSTL 383
P LL+ RPP PP PV TP + L V ++ G +T+
Sbjct: 22 PGLLTPRPPGSPRPPPPV-----------TPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 384 PSHVP--GHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSP-- 439
P P G + + A+ G A PA ++SP P S+ R S +T P P
Sbjct: 71 PESAPRAGPTRTSRPPASGRG-ERAPPAKNTSPGPVSSPGRA--------SGTTRPGPLG 121
Query: 440 -----VSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNT 494
+S ++ P A+ +G+ +S P TP P ++ V
Sbjct: 122 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP-GTPSPAMARRSRAAGTEVGL 180
Query: 495 YGAAPGGSRSRTPT-SPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTE 553
AP +R R PT P + ++S +S S S + RR + A + RS S+
Sbjct: 181 PRPAP-SARPRPPTEGPRKSVSS--ASEHSTTEPSPAARR-RPSAGGGLQRPASRSLSSS 236
Query: 554 PLPKLDNKERGHHGASSSREPVKAQE-----------WDGTPGTPVVTSRLGRCSVSPTL 602
P G + R P + TP LG S SP L
Sbjct: 237 ATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP-L 295
Query: 603 LAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSS 638
+ S+ P S S +P P TP Q++
Sbjct: 296 ATPSPSAPPSPSA----PPSLQTLPSPPATPPSQAT 327
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 57.0 bits (136), Expect = 5e-08
Identities = 86/336 (25%), Positives = 118/336 (35%), Gaps = 72/336 (21%)
Query: 314 PPKGLLCDIPPPFPNLLSHR---PPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVS 370
PP+ +PPP P++ S PP + P P+ SP++ SP P
Sbjct: 161 PPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVP------------- 207
Query: 371 YMKQPAGASPSTLPSHVPGHAKLEKEQAAALG-------PASATPALSSSPPPPSTLYRT 423
P SP P PG+ + ALG P S++ S+ PP P T R
Sbjct: 208 --GGPRQPSPGPTPPPFPGN------RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA 259
Query: 424 QSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQD 483
P P PV S+ ++ PPP + P VP STPRP +
Sbjct: 260 LDDKPPP-----PPPPVGNRPSIHREAVPPPPP---------QNNKPPVP-STPRPSASS 304
Query: 484 GAKMVNAAVNTYGAAP----GGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAE 539
A + G P TP P L SL SS L SG P+E
Sbjct: 305 QAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL-SLSSSTPPLPSPGRSGPLPPPPSE 363
Query: 540 KSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVS 599
+ ++ + PLP R S+SR P TP + SR G
Sbjct: 364 RPPPPVRDPPGRSGPLPPPPPVSR---NGSTSR---------ALPATPQLPSRSG----- 406
Query: 600 PTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLR 635
+ S P+ R ++ + PPP T +R
Sbjct: 407 ----VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIR 438
Score = 43.9 bits (102), Expect = 5e-04
Identities = 52/179 (29%), Positives = 69/179 (38%), Gaps = 37/179 (20%)
Query: 311 VPCPPKGLLCDIPPPFPNLLSHRPPL---LVFPPAPVHCSPNSDESPLTPLEVTKLPVLE 367
+P P L D PPP P + +RP + V PP P + P +P P ++ P
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP-RPSASSQAP--- 307
Query: 368 NVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSS------PPPPSTLY 421
P+ P LP G+ + + L +S+TP L S PPPPS
Sbjct: 308 --PPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPS--- 362
Query: 422 RTQSPHGYPKSHSTSPSPV--SMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPR 478
P PV GRS PL PPP +GS SR+ P+ P R
Sbjct: 363 ------------ERPPPPVRDPPGRS-GPL----PPPPPVSRNGSTSRALPATPQLPSR 404
Score = 37.4 bits (85), Expect = 0.044
Identities = 63/237 (26%), Positives = 83/237 (35%), Gaps = 28/237 (11%)
Query: 412 SSPP--PPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKR--PPPYDAVHSGSLSR 467
S PP PP + P P P P RS P + PPP V GS
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDV--GSKPD 181
Query: 468 SSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSR--SRTPTSPLEELTSLFSSGRSLL 525
S P STPRP+ + V PGG R S PT P + G +
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPV------PGGPRQPSPGPTPPPFPGNRGTALGGGSI 235
Query: 526 RK---SSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGA------SSSREPV- 575
R+ SSS S P T + P P + N+ H A +++ PV
Sbjct: 236 RQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVP 295
Query: 576 ---KAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPP 629
+ P P SR G + P+ +GN + L S+ST +P P
Sbjct: 296 STPRPSASSQAPPPPPPPSRPGPPPLPPS-SSGNDETPRLPQRNLSLSSSTPPLPSP 351
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 57.0 bits (136), Expect = 5e-08
Identities = 86/336 (25%), Positives = 118/336 (35%), Gaps = 72/336 (21%)
Query: 314 PPKGLLCDIPPPFPNLLSHR---PPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVS 370
PP+ +PPP P++ S PP + P P+ SP++ SP P
Sbjct: 161 PPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVP------------- 207
Query: 371 YMKQPAGASPSTLPSHVPGHAKLEKEQAAALG-------PASATPALSSSPPPPSTLYRT 423
P SP P PG+ + ALG P S++ S+ PP P T R
Sbjct: 208 --GGPRQPSPGPTPPPFPGN------RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA 259
Query: 424 QSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQD 483
P P PV S+ ++ PPP + P VP STPRP +
Sbjct: 260 LDDKPPP-----PPPPVGNRPSIHREAVPPPPP---------QNNKPPVP-STPRPSASS 304
Query: 484 GAKMVNAAVNTYGAAP----GGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAE 539
A + G P TP P L SL SS L SG P+E
Sbjct: 305 QAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL-SLSSSTPPLPSPGRSGPLPPPPSE 363
Query: 540 KSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVS 599
+ ++ + PLP R S+SR P TP + SR G
Sbjct: 364 RPPPPVRDPPGRSGPLPPPPPVSR---NGSTSR---------ALPATPQLPSRSG----- 406
Query: 600 PTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLR 635
+ S P+ R ++ + PPP T +R
Sbjct: 407 ----VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIR 438
Score = 43.9 bits (102), Expect = 5e-04
Identities = 52/179 (29%), Positives = 69/179 (38%), Gaps = 37/179 (20%)
Query: 311 VPCPPKGLLCDIPPPFPNLLSHRPPL---LVFPPAPVHCSPNSDESPLTPLEVTKLPVLE 367
+P P L D PPP P + +RP + V PP P + P +P P ++ P
Sbjct: 252 LPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTP-RPSASSQAP--- 307
Query: 368 NVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSS------PPPPSTLY 421
P+ P LP G+ + + L +S+TP L S PPPPS
Sbjct: 308 --PPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPS--- 362
Query: 422 RTQSPHGYPKSHSTSPSPV--SMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPR 478
P PV GRS PL PPP +GS SR+ P+ P R
Sbjct: 363 ------------ERPPPPVRDPPGRS-GPL----PPPPPVSRNGSTSRALPATPQLPSR 404
Score = 37.4 bits (85), Expect = 0.044
Identities = 63/237 (26%), Positives = 83/237 (35%), Gaps = 28/237 (11%)
Query: 412 SSPP--PPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKR--PPPYDAVHSGSLSR 467
S PP PP + P P P P RS P + PPP V GS
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDV--GSKPD 181
Query: 468 SSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSR--SRTPTSPLEELTSLFSSGRSLL 525
S P STPRP+ + V PGG R S PT P + G +
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPV------PGGPRQPSPGPTPPPFPGNRGTALGGGSI 235
Query: 526 RK---SSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGA------SSSREPV- 575
R+ SSS S P T + P P + N+ H A +++ PV
Sbjct: 236 RQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVP 295
Query: 576 ---KAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPP 629
+ P P SR G + P+ +GN + L S+ST +P P
Sbjct: 296 STPRPSASSQAPPPPPPPSRPGPPPLPPS-SSGNDETPRLPQRNLSLSSSTPPLPSP 351
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 56.6 bits (135), Expect = 7e-08
Identities = 120/557 (21%), Positives = 176/557 (31%), Gaps = 115/557 (20%)
Query: 102 PQDRLPHP-----CSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSE 156
P R+P P S R +S S+ G+ SS R PP KP + TSS
Sbjct: 328 PPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPK------RTSSP 381
Query: 157 TVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHG 216
+ S S P R + P PPPK + +P Q S ++ +
Sbjct: 382 PRKTRRLSPSASPPRRRHRPSPP---------ATPPPKTRHSPTPQQSNRTRKSRVSV-S 431
Query: 217 PRRTS--LPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYP 274
P RTS + + + SP+ P+ + E + D Q Y
Sbjct: 432 PGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQ 491
Query: 275 IFDDLGQDAKCDFDHHSCS---------------SQCATPTVPDLDFAKASVPCPPKGLL 319
D G + + + S S+ A+P+ K P+G
Sbjct: 492 SSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSP-----RKRQKETSPRGRR 546
Query: 320 CDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGAS 379
P P P P PAP P +P P P +
Sbjct: 547 RRSPSPPPTRRRRSP-----SPAP---PPRRRRTPTPP-----------------PRRRT 581
Query: 380 PSTLP-SHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPS 438
PS P P + P+ ++SPPPP + SP P S S
Sbjct: 582 PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSP---PPKRRVSHS 638
Query: 439 PVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAA 498
P RS +P++ +R P + H S S + +P+P
Sbjct: 639 PPPKQRS-SPVTKRRSPSLSSKHRKGSSPSRSTREARSPQP------------------- 678
Query: 499 PGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEP---- 554
R SP SS + R +SS + ++ ST ++ S + EP
Sbjct: 679 ----NKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIK 734
Query: 555 ---LPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEP 611
P + R S S P A + P +PV S SP+ + P
Sbjct: 735 KAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQ-------SQSPST-----NWSP 782
Query: 612 KVSCKLGRSASTSGVPP 628
V K +S + S PP
Sbjct: 783 AVPVKKAKSPTPSPSPP 799
Score = 52.0 bits (123), Expect = 2e-06
Identities = 101/463 (21%), Positives = 164/463 (35%), Gaps = 65/463 (14%)
Query: 136 RRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKP 195
R +P P P T+ S + + + T S+ +P RT +++ P PKP
Sbjct: 398 RHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKP 457
Query: 196 KRNPNTQLSTSFDETYIKKHG-----PRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVG 250
++ +LS S ++ K RR ++ S + E+E P +
Sbjct: 458 RK---VELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKN 514
Query: 251 NILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKAS 310
+ R+ +S + + G+ + +P+ P ++
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRR-------------SPSPPPTRRRRSP 561
Query: 311 VPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDE--SPLTPLEVTKLPVLEN 368
P PP P P P + PP P+P SP SP P P
Sbjct: 562 SPAPPPRRR-RTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP------PKRRT 614
Query: 369 VSYMKQP-AGASPSTLPSHVPGHAKLEKEQAAALGPASATPALS------SSPPPPSTLY 421
S P ASPS P H+ K++++ + +P+LS SSP +
Sbjct: 615 ASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPV-TKRRSPSLSSKHRKGSSPSRSTREA 673
Query: 422 RTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVP-------H 474
R+ P+ K HS SP P + S +P PP S R SPS
Sbjct: 674 RSPQPN---KRHSPSPRPRAPQTSSSP-----PPVRRGASSSPQRRQSPSPSTRPIRRVS 725
Query: 475 STPRP--------VSQDGAKMVNAAVNTYGA-APGGSRSRTPTSPLE-ELTSLFSSGRSL 524
TP P S + V+++ + G+ P + P SP++ + S S
Sbjct: 726 RTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVP 785
Query: 525 LRKSSSGRRSKEPAEKSTEE--LKVRSHSTEPLPKLDNKERGH 565
++K+ S S P S +E K + + K D K + H
Sbjct: 786 VKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKH 828
Score = 43.1 bits (100), Expect = 8e-04
Identities = 71/264 (26%), Positives = 99/264 (37%), Gaps = 31/264 (11%)
Query: 407 TPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKR------PPPYDAV 460
+P+ S+SP P T SP G + S SP P RS +P R PPP
Sbjct: 524 SPSRSASPSPRKRQKET-SPRGR-RRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 581
Query: 461 HSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFS- 519
S R SPS +P P+ + + T P R +P+ P + S
Sbjct: 582 PSPPPRRRSPSPRRYSP-PIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPP 640
Query: 520 ----SGRSLLRKS---SSGRRSKEPAEKSTEELKV----RSHSTEPLPKLDNKERG---- 564
S R+S SS R +ST E + + HS P P+
Sbjct: 641 PKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPV 700
Query: 565 HHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTS 624
GASSS P + Q +P T + R+ R + P + S P+ ++ S S S
Sbjct: 701 RRGASSS--PQRRQS--PSPSTRPIR-RVSR-TPEPKKIKKAASPSPQSVRRVSSSRSVS 754
Query: 625 GVPPPSVTPLRQSSDLQQSQVPSS 648
G P P+ QSQ PS+
Sbjct: 755 GSPEPAAKKPPAPPSPVQSQSPST 778
Score = 40.4 bits (93), Expect = 0.005
Identities = 102/452 (22%), Positives = 147/452 (32%), Gaps = 77/452 (17%)
Query: 137 RQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEA-SAKPRPHSDEYSKKIPPPKP 195
R P + R PS + SS S S RT++ S P P E + ++P P
Sbjct: 170 RSPRRRKSRSPSPR-RRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSV 228
Query: 196 K-RNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILR 254
K + P+ Q +TS S + ++ P PE +EP
Sbjct: 229 KVKEPSVQEATS------------------TSDILKVPKPEPIPEPKEP----------- 259
Query: 255 DFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCP 314
E + + E E+ + + S+ + T P S
Sbjct: 260 --SPEKNSKKEKEKEKTR-------PRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYS 310
Query: 315 PKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQ 374
P+ P P R P PP P H S PV
Sbjct: 311 PRRRPSPRRRPSPR---RRTPPRRMPPPPRHRRSRS-------------PVRRRRRSSAS 354
Query: 375 PAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHS 434
+G+S S+ S K ++ ++ P T LS S PP +R P P
Sbjct: 355 LSGSSSSSSSSRSRSPPKKPPKRTSS--PPRKTRRLSPSASPPRRRHRPSPPATPPPKTR 412
Query: 435 TSPSPVSMGR---SLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAA 491
SP+P R S +S R H G+ R SPS P+P + ++
Sbjct: 413 HSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPS---PAPKPRKVELSESEEDK 469
Query: 492 VNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSH- 550
AA + R ++ +S SG S SS R K K+ E + R H
Sbjct: 470 GGKMAAADSVQQRRQYRRQNQQSSS--DSGSS---SSSEDERPKRSHVKNGEVGRRRRHS 524
Query: 551 ---STEPLPKLDNKE---RGHHGASSSREPVK 576
S P P+ KE RG S S P +
Sbjct: 525 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTR 556
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 56.2 bits (134), Expect = 9e-08
Identities = 101/460 (21%), Positives = 158/460 (34%), Gaps = 64/460 (13%)
Query: 140 PPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNP 199
PP PK P+T + T + +P P P + + PP PK P
Sbjct: 1294 PPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPA------VTPPSPKGTP 1347
Query: 200 NTQLSTSFDE----TYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRD 255
+T + T K GP P ++ S G PA P + G +
Sbjct: 1348 TLPATTPSSKGGPTTPSSKEGPT----PPAATPSHKGGPAMTPPSPKR------GPAIPS 1397
Query: 256 FRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPP 315
+ + + K P + A P V + KA P
Sbjct: 1398 PKGDPTSPAVIPLSPKKAPATPVTREGAATP-----SKGDLTPPAVTPVSLKKAPATSAP 1452
Query: 316 KG-LLCDIPPPFPNLLSHRPPLLVFPPAP--VHCSPNSDESPLTP--LEVTKLPVLENVS 370
KG P L + PP PPAP V S + ++P TP + LP + S
Sbjct: 1453 KGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSS 1512
Query: 371 YMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASA-------------TPALSS---SP 414
+ PA S P P L K+ A L P A TPA+ + +P
Sbjct: 1513 PKEVPATPSSRRDPI-APTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAP 1571
Query: 415 PPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPH 474
PS+ + P P ++ +PSP + L P ++ P P +A +++ SP
Sbjct: 1572 ATPSSKEASSPPAVTPSTYKGAPSPKEL---LIPPAVTSPSPKEAPTPPAVTPPSPEKGP 1628
Query: 475 STPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRS 534
+TP P + V + S +PTSP S+ + + ++S G +
Sbjct: 1629 ATPAPKGTPTSPPVTPS----------SLKDSPTSP----ASVTCKMGATVPQASKGLPA 1674
Query: 535 KEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREP 574
K+ E L + + P+ ++ SS+ P
Sbjct: 1675 KKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSP 1714
Score = 50.4 bits (119), Expect = 5e-06
Identities = 112/512 (21%), Positives = 163/512 (31%), Gaps = 48/512 (9%)
Query: 141 PKPKRDPSTKLSTSSETVSSTAAS--KSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRN 198
P PK P+T + +S T++S K+ TP A P P PP PK
Sbjct: 894 PFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGG 953
Query: 199 PNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRK 258
P T S + T P + P SP G P G K
Sbjct: 954 PATP-SPKWAPT------PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPK 1006
Query: 259 EDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCP---P 315
K G A F + + ATP P + A+ P P P
Sbjct: 1007 GAPTPPAVTPPSPK-------GSPAATPFPKGASTPPAATP--PSPKGSPAATPLPKGAP 1057
Query: 316 KGLLCDIP-----PPFPNLLSHRPPLLVFPPAPV--HCSPNSDESPLTPLEVTKLPVLEN 368
+P P P+L P PP+P +P+ +P+ P P
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGL 1117
Query: 369 VSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALS---SSPPPPSTLYRTQS 425
+ + A +P+ P G + A PA+ P+ ++PPP +
Sbjct: 1118 ATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAA 1177
Query: 426 PHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHST-PRPVSQDG 484
PK +PSP G TP + P P + + S + +P+ P +T P P
Sbjct: 1178 TPPSPKGGLATPSP--KGAPTTPAATP-PSPKGGLATPS-PKGAPTTPAATPPSPKGGLA 1233
Query: 485 AKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEE 544
A T A P + T P + + + S G + P + +
Sbjct: 1234 TPSPKGAPTTPAATPPSPKGGPATPPPKGA----PTPPAATPPSLKGGLATPPHKGAPNP 1289
Query: 545 LKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLA 604
V T P PK GA + G+PGTP +V+P
Sbjct: 1290 AVV----TPPSPKGGPATSPPKGAPTPPAATPPSP-KGSPGTPPPKGAPTPPAVTPPSPK 1344
Query: 605 GNHSSEPKVSCKLG---RSASTSGVPPPSVTP 633
G + G +S G PP+ TP
Sbjct: 1345 GTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376
Score = 48.9 bits (115), Expect = 1e-05
Identities = 80/346 (23%), Positives = 121/346 (34%), Gaps = 34/346 (9%)
Query: 298 TPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVH--CSPNSDESPL 355
TPT+P + P P PP SH+ + PP+P P+ P
Sbjct: 1346 TPTLPATTPSSKGGPTTPSSKEGPTPPAATP--SHKGGPAMTPPSPKRGPAIPSPKGDPT 1403
Query: 356 TPLEVTKLPVLENVSYMKQPAGASPS----TLPSHVPGHAKLEKEQAAALGPASATPALS 411
+P + P + + + A+PS T P+ P K +A G ATP+
Sbjct: 1404 SPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG-GPATPSSK 1462
Query: 412 SSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPS 471
P P+ + PK +TS SP + P+ P AV S + P+
Sbjct: 1463 GDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGA---PTLPAVIPSS-PKEVPA 1518
Query: 472 VPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSG 531
P S P++ + T A T P + T + + SS
Sbjct: 1519 TPSSRRDPIAPTATLLSKKTPATL-APKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSK 1577
Query: 532 RRSKEPA--------EKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGT 583
S PA S +EL + T P PK E A + P K
Sbjct: 1578 EASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPK----EAPTPPAVTPPSPEKGPATPAP 1633
Query: 584 PGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSA--STSGVP 627
GTP V+P+ L + +S V+CK+G + ++ G+P
Sbjct: 1634 KGTPTSPP------VTPSSLKDSPTSPASVTCKMGATVPQASKGLP 1673
Score = 45.8 bits (107), Expect = 1e-04
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 20/168 (11%)
Query: 340 PPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAA 399
PP+P S +PL+P VT P K+ S LP G A +QA
Sbjct: 858 PPSPKGAPTPSAVTPLSPKGVTLPP--------KETPTPSVVNLPFPKEGPATPAPKQAP 909
Query: 400 ALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDA 459
AL S++P + + P P + + SP G P + +P P G TP P P
Sbjct: 910 ALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATP-PSPKGGPATPSPKWAPTP--- 965
Query: 460 VHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTP 507
++P P P S GA AA T + GG + +P
Sbjct: 966 ------PAATPPSPKGGPATPSPKGAPTPPAA--TPPSPKGGPATPSP 1005
Score = 44.3 bits (103), Expect = 4e-04
Identities = 119/518 (22%), Positives = 165/518 (31%), Gaps = 69/518 (13%)
Query: 140 PPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNP 199
PP PK P+T + T + P A P P + PP PK +P
Sbjct: 970 PPSPKGGPATPSPKGAPTPPAATP------PSPKGGPATPSPKGAPTPPAVTPPSPKGSP 1023
Query: 200 NTQLSTSFDETYIKKHGPRRTSLPRDSSL-SQMGSPAGDPEEEEPVYIEMVGNILRDFRK 258
+T F P+ S P ++ S GSPA P + G
Sbjct: 1024 ---AATPF---------PKGASTPPAATPPSPKGSPAATPLPK--------GAPTTPAAT 1063
Query: 259 EDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGL 318
+ +K G S ATP+ A+ P PKG
Sbjct: 1064 LPSPKGGPATPSLK-------GAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG 1116
Query: 319 LCDIP-----------PPFPNLLSHRPPLLVFP--PAPVHCSPNSDESPLTPLEVTKLPV 365
L P PP P PP P PA SP + P P
Sbjct: 1117 LATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPA 1176
Query: 366 LENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQS 425
S A SP P+ K A P A +++PP P T S
Sbjct: 1177 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPS 1236
Query: 426 PHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGA 485
P G P + + +P P G TP P P A SL + PH GA
Sbjct: 1237 PKGAPTTPAATP-PSPKGGPATPPPKGAPTP-PAATPPSLKGGLATPPHK--------GA 1286
Query: 486 KMVNAAVNTYGAAPGGSRSR----TPTSPLEELTS-LFSSGRSLLRKSSSGRRSKEPAEK 540
N AV T + GG + PT P S S G + + + P+ K
Sbjct: 1287 P--NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK 1344
Query: 541 STEELKVRSHSTEPLPKLDNKERG--HHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSV 598
T L + S++ P + + G A+ S + A P + S G
Sbjct: 1345 GTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGD-PT 1403
Query: 599 SPTLLAGNHSSEP--KVSCKLGRSASTSGVPPPSVTPL 634
SP ++ + P V+ + + S + PP+VTP+
Sbjct: 1404 SPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPV 1441
Score = 43.5 bits (101), Expect = 6e-04
Identities = 87/363 (23%), Positives = 127/363 (34%), Gaps = 42/363 (11%)
Query: 298 TPTVPDLDFA---KASVPCPPKGLLCDIPP---PFPNLLSHRPPLLVFP------PAPVH 345
+PT P A A P PKG+ +PP P P++++ L FP PAP
Sbjct: 855 SPTPPSPKGAPTPSAVTPLSPKGVT--LPPKETPTPSVVN-----LPFPKEGPATPAPKQ 907
Query: 346 CSPNSDESPLTPLEVTKLPVLENVSYMKQPAGAS--PSTLPSHVPGHAKLEKEQAAALGP 403
+P + +P + P + + P GA P+ P G + A P
Sbjct: 908 -APALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPP 966
Query: 404 ASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSG 463
A+ P+ P PS P P S P+ S + TP ++ P P + +
Sbjct: 967 AATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAAT 1026
Query: 464 SLSRSSPSVPHST-PRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGR 522
+ + + P +T P P A + T AA S P +P SL G
Sbjct: 1027 PFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATP-----SL--KGA 1079
Query: 523 SLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGA--------SSSREP 574
++ PA S + + +T P PK H GA S +
Sbjct: 1080 PTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGG 1139
Query: 575 VKAQEWDGTPGTPVVT--SRLGRCSVSPTLLAGNHSSEPKVSCKLG-RSASTSGVP-PPS 630
+ G P TP T S G + P A + S K G + S G P P+
Sbjct: 1140 LATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1199
Query: 631 VTP 633
TP
Sbjct: 1200 ATP 1202
Score = 36.2 bits (82), Expect = 0.098
Identities = 86/372 (23%), Positives = 125/372 (33%), Gaps = 62/372 (16%)
Query: 290 HSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNL--LSHRPPLLVFPPAPVHCS 347
++C+ P++ + S PP G PP + +SH L +P C
Sbjct: 716 NTCAPLATLVLAPEIPKSVPSPSLPPAGT----PPGTKKVDGISHTSALAPVASSPKECP 771
Query: 348 PN--------SDESPLTPLEVTKLPVLENVS-YMKQP----AGASPST----LPSHV-PG 389
S + LT L + P+ +VS K+P A P T L S V P
Sbjct: 772 TEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPV 831
Query: 390 HAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPL 449
A E + + + +PA + SP PP SP G P +PS V TPL
Sbjct: 832 EASFLPENSLSFQGSKDSPATTHSPTPP-------SPKGAP-----TPSAV------TPL 873
Query: 450 SLK--RPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTP 507
S K PP + ++ P +TP P M +++ A P
Sbjct: 874 SPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPAS 933
Query: 508 TSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHG 567
SP G ++ PA S + +T P PK G
Sbjct: 934 PSP---------KGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984
Query: 568 ASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVP 627
A + G P TP +V+P G+ ++ P G S + P
Sbjct: 985 APTPPAATPPSP-KGGPATPSPKGAPTPPAVTPPSPKGSPAATP---FPKGASTPPAATP 1040
Query: 628 P-----PSVTPL 634
P P+ TPL
Sbjct: 1041 PSPKGSPAATPL 1052
Score = 36.2 bits (82), Expect = 0.098
Identities = 124/563 (22%), Positives = 173/563 (30%), Gaps = 112/563 (19%)
Query: 134 GSRRQPPPKPKRDP---STKLSTSSETVSSTAASKSGKTPERTEASAKPR------PHSD 184
G PP PKR P S K +S V + K+ TP E +A P P
Sbjct: 1380 GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVT 1439
Query: 185 EYSKKIPPPK--PKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEE 242
S K P PK P T S+ D T P P ++ SP P
Sbjct: 1440 PVSLKKAPATSAPKGGPATP-SSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPA 1498
Query: 243 PVYIEMVGNILRDFRKE---------DDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCS 293
P+ + ++ KE D A K P L +
Sbjct: 1499 PMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPA--TLAPKEALIPPAMTVP 1556
Query: 294 SQCATPTVPDLDFAKASVPCPPKGLLCDIPP---PFPNLLSHRPPLLVFPPAPVHCSPNS 350
S TP +P P P PP P + P L+ PPA SP
Sbjct: 1557 SPKKTPAIP----TPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKE 1612
Query: 351 DESP--LTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPAS--- 405
+P +TP K P +PS+L A + + A + AS
Sbjct: 1613 APTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGL 1672
Query: 406 -------ATPALSSSPPPPSTLYRTQSPHGYP---KSHSTSP----SPVSMGRSLTPLSL 451
A + +P P ST T P KS +TSP P + S PLS
Sbjct: 1673 PAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLST 1732
Query: 452 KRPPPY--------------DAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGA 497
P P DA HS + P STP + + + A
Sbjct: 1733 VAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSA 1792
Query: 498 APG--------------------------GSRSRTPTSPL-----EELTSLF-----SSG 521
AP G +P+ PL +EL L S G
Sbjct: 1793 APSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGG 1852
Query: 522 ---RSLLRKSSSGRRS---------KEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGAS 569
+S+L + + + K+P K+ + S S E +P+L+ ++ +
Sbjct: 1853 VPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQD-STQATT 1911
Query: 570 SSREPVKAQEWDGTPGTPVVTSR 592
+ A E D P + SR
Sbjct: 1912 QQAQLAAAAEIDEEPVSKAKQSR 1934
Score = 35.4 bits (80), Expect = 0.17
Identities = 41/157 (26%), Positives = 57/157 (36%), Gaps = 32/157 (20%)
Query: 340 PPAPVHCSPNSDESPL-----------------TPLEVTKLPVLENVSYMKQPAGASPST 382
P P CSP + PL TPLEV P ++ S P G +P
Sbjct: 43 PTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEV---PFPQSSSGTALPLGTAPEA 99
Query: 383 LPSHVPGHAKLEKEQAAALGPASATPALS-SSPPPPSTLYRTQSPHGYPKSHSTSPSPVS 441
P+ +P +GP + AL+ +SP TL T S + +P V
Sbjct: 100 -PTFLPN----------LIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQ 148
Query: 442 MGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPR 478
+ P L PP SGS+ S + S P+
Sbjct: 149 KSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPK 185
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 55.1 bits (131), Expect = 2e-07
Identities = 125/531 (23%), Positives = 181/531 (34%), Gaps = 70/531 (13%)
Query: 140 PPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNP 199
PP + P++ + E + S A P +T ++ PH + + P P P + P
Sbjct: 520 PPSLQTPPASLTTPPLENLPSLAPP-----PLQTASAPLTTPHLE--TPPCPAPCPLQAP 572
Query: 200 NTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMG------SPAGDPEEEEPVYIEMVGNIL 253
+ L+T ET P + P +S G SP P + P + L
Sbjct: 573 PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLA-----L 627
Query: 254 RDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPC 313
+ + + P A H + + P P + +
Sbjct: 628 PPLQAPPSPPASPPLSPLATP-----SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 682
Query: 314 PPKGLLCDIPPPFPNLLSHRPPLLV--FPPAPVHCSPNSDESPLTPLEVTKLPVLENVSY 371
PP P P L+ PPL V PPA SP++ P P + P+ S
Sbjct: 683 PPVSPSATPPSQAPPSLA-APPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSP 741
Query: 372 MKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSP-HGYP 430
P + +T P VP Q PAS + + PPP + P P
Sbjct: 742 PASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALP 801
Query: 431 KSHSTSP--SPVSMGRSLTPLSLKRPPPY-DAVHSGSLSRSSPSVPHSTP-----RPVSQ 482
++ P +P S SL L PPP V + L + PS P S RP +
Sbjct: 802 SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP 861
Query: 483 DGAKMVNAAVNTYGAAPG--GSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK 540
V+ T APG SR+P+S L SG L SSS A
Sbjct: 862 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTL--------SGPDLAGHSSS-------ATS 906
Query: 541 STEELKVRSHSTE----PLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPV-------V 589
+ EEL+ E P D + H A+ SR P + G PG P+
Sbjct: 907 TPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGP 966
Query: 590 TSRLGRCSV-------SPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTP 633
S G C++ S T G P G++A+ +G S +P
Sbjct: 967 GSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP 1017
Score = 50.1 bits (118), Expect = 7e-06
Identities = 92/382 (24%), Positives = 134/382 (35%), Gaps = 45/382 (11%)
Query: 140 PPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPR------PHSDEYSKKIPPP 193
PP P PS + S + A S TP + PHS PP
Sbjct: 345 PPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPP 404
Query: 194 KPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDS--SLSQMGSPAGDPEEEEPVYIEMVGN 251
P + Q +TS ++ T PR + SL+ PA P + P+ +
Sbjct: 405 SPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLS-- 462
Query: 252 ILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLD----FA 307
L S AV + P+ Q A HS + ++ +P L+ A
Sbjct: 463 -LPASPPLQTSLSPAV-SPLSSPLTIHPLQ-ALSSLASHSPQAPLSSLIMPPLETQSSLA 519
Query: 308 KASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLE 367
S+ PP L PP NL S PP L AP+ +P+ + P P+
Sbjct: 520 PPSLQTPPASLTT---PPLENLPSLAPPPLQTASAPL-TTPHLETPPCP----APCPLQA 571
Query: 368 NVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPH 427
S + P +PS++ + P QA PA A+P L P PP + T P
Sbjct: 572 PPSPLTTPPPETPSSIATPPP--------QAP---PALASPPLQGLPSPPLSPLATPPPQ 620
Query: 428 GYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKM 487
+P +++ P S PP + + S + H P S +
Sbjct: 621 --------APPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPP 672
Query: 488 VNAAVNTYGAAPGGSRSRTPTS 509
V A + A+P S S TP S
Sbjct: 673 VQAPFSP-PASPPVSPSATPPS 693
Score = 42.7 bits (99), Expect = 0.001
Identities = 82/301 (27%), Positives = 107/301 (35%), Gaps = 61/301 (20%)
Query: 298 TPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTP 357
TP P A S P PKGL PP P L P+ SP + SP +
Sbjct: 262 TPRAP----AHPSQP-KPKGLQALRPPQVTPPRKDAAPAL----GPLSSSPLATPSP-SG 311
Query: 358 LEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPP 417
+ +P +N A P+TLP P L A SA P+L + P PP
Sbjct: 312 TKARPVPPPDNA------ATPLPATLPPSPP----LATPLPLAPPSPSAPPSLQTLPSPP 361
Query: 418 ST------LYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRP----------------- 454
+T T P P S T P P+ + SLT SL+ P
Sbjct: 362 ATPPSQAPPSMTTPPMQAPPSLQTIP-PIQVPHSLTSPSLQAPPSPLALSSLQATTSLGS 420
Query: 455 PPYDAVHS--------GSLSRSSPSVPHSTP--RPVSQDGAKMVNAAVNTYGAAPGGSRS 504
P A HS S +SPS P STP P Q + + +P S
Sbjct: 421 PTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPL 480
Query: 505 RTPTS--PLEELTSLFSSG-----RSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPK 557
+P + PL+ L+SL S SL+ + S P T + + E LP
Sbjct: 481 SSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPS 540
Query: 558 L 558
L
Sbjct: 541 L 541
Score = 42.0 bits (97), Expect = 0.002
Identities = 71/316 (22%), Positives = 105/316 (33%), Gaps = 49/316 (15%)
Query: 327 PNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVS---YMKQPAGASPSTL 383
P LL+ RPP PP PV TP + L V ++ G +T+
Sbjct: 22 PGLLTPRPPGSPRPPPPV-----------TPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 384 PSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSM- 442
P P ++ PAS PA P + +TSP PVS
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRG-------------ERAPPAKNTSPGPVSSP 117
Query: 443 GRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGS 502
GR+ RP P G + +V + A A +T G PG
Sbjct: 118 GRA---SGTTRPGPLG--QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPG-- 170
Query: 503 RSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKE 562
TP+ + + + L R + S R + P E + + S + P +
Sbjct: 171 ---TPSPAMARRSRAAGTEVGLPRPAPSA-RPRPPTEGPRKSVSSASEHSTTEPSPAARR 226
Query: 563 RGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSAS 622
R G R ++ + TP+ + S T A H S+PK
Sbjct: 227 RPSAGGGLQRPASRSL---SSSATPLSSPARSGPSARGTPRAPAHPSQPK-------PKG 276
Query: 623 TSGVPPPSVTPLRQSS 638
+ PP VTP R+ +
Sbjct: 277 LQALRPPQVTPPRKDA 292
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 53.1 bits (126), Expect = 8e-07
Identities = 96/395 (24%), Positives = 124/395 (31%), Gaps = 86/395 (21%)
Query: 103 QDRLPHPCSSGF--SVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSS 160
+ LP P S S+ +SL+ G +D R P S + +++ SS
Sbjct: 93 EQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVE----NDSDSS 148
Query: 161 TAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRT 220
+ S+ P P P PP R P T H P
Sbjct: 149 SGLSQGPARPYHPPPLFPPSPQ--------PPDSTPRQPEASFEPHPSVTPTGYHAPME- 199
Query: 221 SLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLG 280
P S + Q +P G P +Y G +L P G
Sbjct: 200 --PPTSRMFQ--APPGAPPPHPQLYPGGTGGVLSG------------------PPMGPKG 237
Query: 281 QDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFP---NLLSHRPPLL 337
A + Q PT P + + PP PP P L PP
Sbjct: 238 GGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTK-----PPTTPVGGGNLPSAPPPA 292
Query: 338 VFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKL---- 393
FP H +PN P L L N S GA P LP H+P +
Sbjct: 293 NFP----HVTPNLPPPPA-------LRPLNNASASPPGLGAQP--LPGHLPSPHAMGQGM 339
Query: 394 -------EKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSL 446
EK A P S PA SS+P PP +P S S+S S + S
Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMR---------FPYSSSSSSSAAASSSSS 390
Query: 447 TPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVS 481
+ S P P S++ PS PHS P P S
Sbjct: 391 SSSSSASPFP--------ASQALPSYPHSFPPPTS 417
Score = 39.7 bits (91), Expect = 0.009
Identities = 110/451 (24%), Positives = 152/451 (33%), Gaps = 96/451 (21%)
Query: 140 PPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSD---EYSKKIPPPKPK 196
P P R P + S+SS SS+++S S +SA P P S Y PPP
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSS--------SSASPFPASQALPSYPHSFPPP--- 415
Query: 197 RNPNTQLSTSFDETYIKKHGPRRT--SLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILR 254
T LS S P+ T SLP + SQ P P Y ++ N
Sbjct: 416 ----TSLSVS-------NQPPKYTQPSLPSQAVWSQGPPPP-------PPYGRLLANSNA 457
Query: 255 D---FRKEDDDQSEAV--------YEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPD 303
F QS A + + + Q + HH S P P
Sbjct: 458 HPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSG----PPPP- 512
Query: 304 LDFAKASVPCPPKGLLCDIPPPF---PNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV 360
+ P P +G P+ P+L S RP +PP P H P + +
Sbjct: 513 -----GAFPHPLEGGSSHHAHPYAMSPSLGSLRP----YPPGPAHLPPPHSQVSYSQAGP 563
Query: 361 TKLPVLENVSYMKQPAGASPSTLPSHVP-GHAKLEKEQAAALGPASATPALSSSPPPPST 419
PV + + +S ST P H + A P P +++S ST
Sbjct: 564 NGPPVSSS-------SNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLST 616
Query: 420 L----------YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSS 469
+ Y+T SP G P +PSP + PP Y S +
Sbjct: 617 VIATVASSPAGYKTASPPGPPPYGKRAPSPGA-------YKTATPPGYKPGSPPSFRTGT 669
Query: 470 PSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSS 529
P T P K + V G P S P+ P +SG L S
Sbjct: 670 PPGYRGTSPPAGPGTFKPGSPTVGP-GPLPPAGPSGLPSLPPPPAAP--ASGPPL----S 722
Query: 530 SGRRSKEPAEK-STEELKV-RSHSTEPLPKL 558
+ + +EPAE+ T E V + S P PK+
Sbjct: 723 ATQIKQEPAEEYETPESPVPPARSPSPPPKV 753
Score = 30.8 bits (68), Expect = 4.1
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 107 PHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPK----RDPSTKLSTSSETVSSTA 162
P SS S S S S + S G + P P P S LST TV+S+
Sbjct: 566 PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP 625
Query: 163 ASKSGKTPERTEASAKPRPHSDEYSKKIPPP-KPKRNPNTQLSTSFDETYIKKHGPRRTS 221
A +P K P Y PP KP P+ + T G R TS
Sbjct: 626 AGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGT--------PPGYRGTS 677
Query: 222 LPRDSSLSQMGSPAGDP 238
P + GSP P
Sbjct: 678 PPAGPGTFKPGSPTVGP 694
Score = 30.0 bits (66), Expect = 7.0
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 100 PAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVS 159
PAP R P+ SS S + S SS S P P + PS S
Sbjct: 367 PAPPMRFPYSSSSSSSAAASS--------SSSSSSSSASPFPASQALPSYPHSFP----P 414
Query: 160 STAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKP 195
T+ S S + P+ T+ S P +S+ PPP P
Sbjct: 415 PTSLSVSNQPPKYTQPSL---PSQAVWSQGPPPPPP 447
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 53.1 bits (126), Expect = 8e-07
Identities = 96/395 (24%), Positives = 124/395 (31%), Gaps = 86/395 (21%)
Query: 103 QDRLPHPCSSGF--SVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSS 160
+ LP P S S+ +SL+ G +D R P S + +++ SS
Sbjct: 93 EQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVE----NDSDSS 148
Query: 161 TAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRT 220
+ S+ P P P PP R P T H P
Sbjct: 149 SGLSQGPARPYHPPPLFPPSPQ--------PPDSTPRQPEASFEPHPSVTPTGYHAPME- 199
Query: 221 SLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLG 280
P S + Q +P G P +Y G +L P G
Sbjct: 200 --PPTSRMFQ--APPGAPPPHPQLYPGGTGGVLSG------------------PPMGPKG 237
Query: 281 QDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFP---NLLSHRPPLL 337
A + Q PT P + + PP PP P L PP
Sbjct: 238 GGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTK-----PPTTPVGGGNLPSAPPPA 292
Query: 338 VFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKL---- 393
FP H +PN P L L N S GA P LP H+P +
Sbjct: 293 NFP----HVTPNLPPPPA-------LRPLNNASASPPGLGAQP--LPGHLPSPHAMGQGM 339
Query: 394 -------EKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSL 446
EK A P S PA SS+P PP +P S S+S S + S
Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMR---------FPYSSSSSSSAAASSSSS 390
Query: 447 TPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVS 481
+ S P P S++ PS PHS P P S
Sbjct: 391 SSSSSASPFP--------ASQALPSYPHSFPPPTS 417
Score = 39.7 bits (91), Expect = 0.009
Identities = 110/451 (24%), Positives = 152/451 (33%), Gaps = 96/451 (21%)
Query: 140 PPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSD---EYSKKIPPPKPK 196
P P R P + S+SS SS+++S S +SA P P S Y PPP
Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSS--------SSASPFPASQALPSYPHSFPPP--- 415
Query: 197 RNPNTQLSTSFDETYIKKHGPRRT--SLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILR 254
T LS S P+ T SLP + SQ P P Y ++ N
Sbjct: 416 ----TSLSVS-------NQPPKYTQPSLPSQAVWSQGPPPP-------PPYGRLLANSNA 457
Query: 255 D---FRKEDDDQSEAV--------YEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPD 303
F QS A + + + Q + HH S P P
Sbjct: 458 HPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSG----PPPP- 512
Query: 304 LDFAKASVPCPPKGLLCDIPPPF---PNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV 360
+ P P +G P+ P+L S RP +PP P H P + +
Sbjct: 513 -----GAFPHPLEGGSSHHAHPYAMSPSLGSLRP----YPPGPAHLPPPHSQVSYSQAGP 563
Query: 361 TKLPVLENVSYMKQPAGASPSTLPSHVP-GHAKLEKEQAAALGPASATPALSSSPPPPST 419
PV + + +S ST P H + A P P +++S ST
Sbjct: 564 NGPPVSSS-------SNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLST 616
Query: 420 L----------YRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSS 469
+ Y+T SP G P +PSP + PP Y S +
Sbjct: 617 VIATVASSPAGYKTASPPGPPPYGKRAPSPGA-------YKTATPPGYKPGSPPSFRTGT 669
Query: 470 PSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSS 529
P T P K + V G P S P+ P +SG L S
Sbjct: 670 PPGYRGTSPPAGPGTFKPGSPTVGP-GPLPPAGPSGLPSLPPPPAAP--ASGPPL----S 722
Query: 530 SGRRSKEPAEK-STEELKV-RSHSTEPLPKL 558
+ + +EPAE+ T E V + S P PK+
Sbjct: 723 ATQIKQEPAEEYETPESPVPPARSPSPPPKV 753
Score = 30.8 bits (68), Expect = 4.1
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 107 PHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPK----RDPSTKLSTSSETVSSTA 162
P SS S S S S + S G + P P P S LST TV+S+
Sbjct: 566 PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP 625
Query: 163 ASKSGKTPERTEASAKPRPHSDEYSKKIPPP-KPKRNPNTQLSTSFDETYIKKHGPRRTS 221
A +P K P Y PP KP P+ + T G R TS
Sbjct: 626 AGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGT--------PPGYRGTS 677
Query: 222 LPRDSSLSQMGSPAGDP 238
P + GSP P
Sbjct: 678 PPAGPGTFKPGSPTVGP 694
Score = 30.0 bits (66), Expect = 7.0
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 100 PAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVS 159
PAP R P+ SS S + S SS S P P + PS S
Sbjct: 367 PAPPMRFPYSSSSSSSAAASS--------SSSSSSSSASPFPASQALPSYPHSFP----P 414
Query: 160 STAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKP 195
T+ S S + P+ T+ S P +S+ PPP P
Sbjct: 415 PTSLSVSNQPPKYTQPSL---PSQAVWSQGPPPPPP 447
>gi|189011568 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 52.8 bits (125), Expect = 1e-06
Identities = 79/291 (27%), Positives = 116/291 (39%), Gaps = 37/291 (12%)
Query: 372 MKQPAGASPSTLPS-----HVPG--HAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQ 424
MKQP A+ ++ H+PG ++ + GP TPA S SP T T
Sbjct: 2213 MKQPLQANMPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPLKTPA-SKSPSEGQTA--TT 2269
Query: 425 SPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTP--RPVSQ 482
SP G S + SPV+ S S K P SGS S+PS P P RP+
Sbjct: 2270 SPRGAKPSVKSELSPVARQTSQIGGSSKAPS-----RSGSRD-STPSRPAQQPLSRPIQS 2323
Query: 483 DGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRR-SKEPAEKS 541
G ++ N G +P S+ P + S SSG + +S GR+ S++ K
Sbjct: 2324 PGRNSISPGRN--GISPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQ 2381
Query: 542 TEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPT 601
T S + +P+ ++ +G + ++ K E T S R S P
Sbjct: 2382 TG----LSKNASSIPRSESASKGLNQMNNGNGANKKVELSRMSSTKSSGSESDR-SERPV 2436
Query: 602 LLAGN----HSSEPKVSCKLGRSASTSGVPPPS--VTPLRQSSDLQQSQVP 646
L+ + + P + KL SAS + P S +P R Q+Q P
Sbjct: 2437 LVRQSTFIKEAPSPTLRRKLEESASFESLSPSSRPASPTR-----SQAQTP 2482
>gi|189011566 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 52.8 bits (125), Expect = 1e-06
Identities = 79/291 (27%), Positives = 116/291 (39%), Gaps = 37/291 (12%)
Query: 372 MKQPAGASPSTLPS-----HVPG--HAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQ 424
MKQP A+ ++ H+PG ++ + GP TPA S SP T T
Sbjct: 2213 MKQPLQANMPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPLKTPA-SKSPSEGQTA--TT 2269
Query: 425 SPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTP--RPVSQ 482
SP G S + SPV+ S S K P SGS S+PS P P RP+
Sbjct: 2270 SPRGAKPSVKSELSPVARQTSQIGGSSKAPS-----RSGSRD-STPSRPAQQPLSRPIQS 2323
Query: 483 DGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRR-SKEPAEKS 541
G ++ N G +P S+ P + S SSG + +S GR+ S++ K
Sbjct: 2324 PGRNSISPGRN--GISPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQ 2381
Query: 542 TEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPT 601
T S + +P+ ++ +G + ++ K E T S R S P
Sbjct: 2382 TG----LSKNASSIPRSESASKGLNQMNNGNGANKKVELSRMSSTKSSGSESDR-SERPV 2436
Query: 602 LLAGN----HSSEPKVSCKLGRSASTSGVPPPS--VTPLRQSSDLQQSQVP 646
L+ + + P + KL SAS + P S +P R Q+Q P
Sbjct: 2437 LVRQSTFIKEAPSPTLRRKLEESASFESLSPSSRPASPTR-----SQAQTP 2482
>gi|53759122 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 52.8 bits (125), Expect = 1e-06
Identities = 79/291 (27%), Positives = 116/291 (39%), Gaps = 37/291 (12%)
Query: 372 MKQPAGASPSTLPS-----HVPG--HAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQ 424
MKQP A+ ++ H+PG ++ + GP TPA S SP T T
Sbjct: 2213 MKQPLQANMPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPLKTPA-SKSPSEGQTA--TT 2269
Query: 425 SPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTP--RPVSQ 482
SP G S + SPV+ S S K P SGS S+PS P P RP+
Sbjct: 2270 SPRGAKPSVKSELSPVARQTSQIGGSSKAPS-----RSGSRD-STPSRPAQQPLSRPIQS 2323
Query: 483 DGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRR-SKEPAEKS 541
G ++ N G +P S+ P + S SSG + +S GR+ S++ K
Sbjct: 2324 PGRNSISPGRN--GISPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQ 2381
Query: 542 TEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPT 601
T S + +P+ ++ +G + ++ K E T S R S P
Sbjct: 2382 TG----LSKNASSIPRSESASKGLNQMNNGNGANKKVELSRMSSTKSSGSESDR-SERPV 2436
Query: 602 LLAGN----HSSEPKVSCKLGRSASTSGVPPPS--VTPLRQSSDLQQSQVP 646
L+ + + P + KL SAS + P S +P R Q+Q P
Sbjct: 2437 LVRQSTFIKEAPSPTLRRKLEESASFESLSPSSRPASPTR-----SQAQTP 2482
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 52.8 bits (125), Expect = 1e-06
Identities = 53/184 (28%), Positives = 69/184 (37%), Gaps = 29/184 (15%)
Query: 311 VPCPPKGL-----LCDIPPPFPNLLSHRPPLLV-----FPPAPVHCSPNSDESPLTPLEV 360
VP PP L C PPP P LS P ++ FPP P P + PL P+
Sbjct: 833 VPVPPPTLPKQQSFCAKPPPSP--LSPVPSVVKQIASQFPPPPT--PPAMESQPLKPVPA 888
Query: 361 TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL 420
P ++ +K PS++P P E + P +P + PPPP T
Sbjct: 889 NVAP--QSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTA 946
Query: 421 YRTQSPHGYP-KSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRP 479
T G P K S + SP K+PPP S +SS H P+
Sbjct: 947 SPTPDKSGSPGKKTSKTSSPGG----------KKPPP--TPQRNSSIKSSSGAEHPEPKR 994
Query: 480 VSQD 483
S D
Sbjct: 995 PSVD 998
Score = 49.7 bits (117), Expect = 9e-06
Identities = 80/347 (23%), Positives = 125/347 (36%), Gaps = 74/347 (21%)
Query: 139 PPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRN 198
PPP P P+ +S KSG ++T ++ P K PPP P+RN
Sbjct: 928 PPPPPSPVPAPP--PPPPPTASPTPDKSGSPGKKTSKTSSP-------GGKKPPPTPQRN 978
Query: 199 PNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPA--GDPEEE---------EPVYIE 247
+ + S+ + P+R S+ DS +S+ PA G P +E +P +
Sbjct: 979 SSIKSSSGAEHP-----EPKRPSV--DSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLN 1031
Query: 248 MVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFA 307
+ G L ++ ++A P+ G+D+ +F S P
Sbjct: 1032 LSGVNLPGVLQQGCVSAKA-------PVLSGRGKDSVVEFPSPPSDSDFPPPP------P 1078
Query: 308 KASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNS-------------DESP 354
+ +P PP +IP F S P + V P P S S D +
Sbjct: 1079 ETELPLPP----IEIPAVFSGNTS--PKVAVVNPQPQQWSKMSVKKAPPPTRPKRNDSTR 1132
Query: 355 LTPLEVTKLPVLENV----------SYMKQP---AGASPSTLPSHVPGHAKLEKEQAAAL 401
LT E+++ P + V S QP A + + + H L + A
Sbjct: 1133 LTQAEISEQPTMATVVPQVPTSPKSSLSVQPGFLADLNRTLQRKSITRHGSLSSRMSRA- 1191
Query: 402 GPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTP 448
+AT + PPPP L Q GY SH + + + G P
Sbjct: 1192 -EPTATMDDMALPPPPPELLSDQQKAGYGGSHISGYATLRRGPPPAP 1237
Score = 41.6 bits (96), Expect = 0.002
Identities = 69/311 (22%), Positives = 98/311 (31%), Gaps = 56/311 (18%)
Query: 298 TPTVPDLDFAKASVPCPPKGLLCDIPPP---------------------FPNLLSHRPPL 336
TP V K + PP G++ PPP P + PPL
Sbjct: 688 TPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPL 747
Query: 337 LVF-------------PPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTL 383
+ PP P +P ++P PL P A P+
Sbjct: 748 KIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPT 807
Query: 384 PSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMG 443
P VP K A+ + P+ TP + P PP TL + QS P SP P +
Sbjct: 808 PP-VPPAKKQPAFPASYIPPSPPTPPV---PVPPPTLPKQQSFCAKPPPSPLSPVPSVVK 863
Query: 444 RSLTPLSLKRPP------PYDAVHSGSLSRSSPSV-------PHSTPRPVSQDGAKMVNA 490
+ + P P V + +S P+V P S P P S D
Sbjct: 864 QIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVP-SPDFPPPPPE 922
Query: 491 AVNTYGAAPGGSRSRTPTSPLEELT----SLFSSGRSLLRKSSSGRRSKEPAEKSTEELK 546
+ + P P P + S G+ + SS G + P + +K
Sbjct: 923 SSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIK 982
Query: 547 VRSHSTEPLPK 557
S + P PK
Sbjct: 983 SSSGAEHPEPK 993
Score = 37.4 bits (85), Expect = 0.044
Identities = 51/208 (24%), Positives = 74/208 (35%), Gaps = 31/208 (14%)
Query: 309 ASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLEN 368
AS P PP PPP P PP PP P +P++ + ++ + + L+N
Sbjct: 621 ASQPSPPLP-----PPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQN 675
Query: 369 VSYMKQPAGA--SPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSP 426
S Q +GA P T P Q+ ++ P P PPPP P
Sbjct: 676 AS---QHSGALFKPPTPP----------VMQSQSVKPQILVPPNGVVPPPP-----PPPP 717
Query: 427 HGYPKSHSTSPSPVSMGRSLTPLSLKRPP--PYDAVHSGSLSRSSPSVPHSTPRPVSQDG 484
P S P SL S PP + H ++ +P P P P+
Sbjct: 718 PPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQA 777
Query: 485 AK----MVNAAVNTYGAAPGGSRSRTPT 508
+ A +T AP +++ PT
Sbjct: 778 PPKPLVTIPAPTSTKTVAPVVTQAAPPT 805
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 52.8 bits (125), Expect = 1e-06
Identities = 117/520 (22%), Positives = 170/520 (32%), Gaps = 72/520 (13%)
Query: 47 DRLRNETNLAYLKEKNEKRRRQEEAIKRIGGEVG--RGHEGSYVGKHFRMGFMTMPAPQD 104
D ET L+ LKEK +KR +EE + G+ R H+ S G + P
Sbjct: 40 DPCAKETVLSALKEKKKKRTVEEEDQIFLDGQENKRRRHDSSGSGHSAFEPLVASGVPAS 99
Query: 105 RLPHPCSSGFSVRSQS----LHSVGGTDDDSS-CGSRRQPPPKPKRDPSTKLSTSSETVS 159
+P P S + SQS L+ + SS G+ P R+ T +S+ +S
Sbjct: 100 FVPKPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYTSGIPSSSRNAITSSYSSTRGIS 159
Query: 160 -------------STAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTS 206
S+ AS +TPER + S P K +Q +
Sbjct: 160 QLWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADK---ESQGEKA 216
Query: 207 FDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEA 266
D T KK S P S + E + + + ED D +
Sbjct: 217 ADTTPRKKQNSNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKK 276
Query: 267 VYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFA--KASVPCPPKGLLCDIPP 324
+ +D K D +S + T T P F A+ PP LL
Sbjct: 277 ASLQWFNQALED-----KSDAASNSVTETPPT-TQPSFTFTLPAAATASPPTSLLAPSTN 330
Query: 325 PFPNLLS--HRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPST 382
P L PP L PP P + E+ P + LP P G S S
Sbjct: 331 PLLESLKKMQTPPSL--PPCPESAGAATTEALSPPKTPSLLP----------PLGLSQS- 377
Query: 383 LPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLY-RTQSPHGYPKSHSTSPSPVS 441
GP P+ S PP+TL +P P + + +P +
Sbjct: 378 -------------------GPPGLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQ 418
Query: 442 MGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGG 501
+ P + P P A L + + P S P + + M AP
Sbjct: 419 AETATKPQATSAPSP--APKQSFLFGTQNTSPSSPAAPAASSASPMFKPIF----TAPPK 472
Query: 502 SRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKS 541
S PT P +T+ S SL +S+ + +P S
Sbjct: 473 SEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSS 512
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 52.0 bits (123), Expect = 2e-06
Identities = 82/293 (27%), Positives = 112/293 (38%), Gaps = 45/293 (15%)
Query: 370 SYMKQPA--GASPSTLP-------SHVPGHAKLEKEQAAALGPASATPAL---SSSPPPP 417
S+ + PA G S S P S P + S TPA S S P
Sbjct: 562 SHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPA 621
Query: 418 STLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTP 477
RT+SP +S S SP+ S GRS + +R RS P
Sbjct: 622 RRRSRTRSPVRR-RSRSRSPARRS-GRSRSRTPARR------------GRSRSRTPARRG 667
Query: 478 RPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRS----LLRKSSSGRR 533
R S+ A+ + + A G SRSRTP SL GRS R+ SG
Sbjct: 668 RSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSS 727
Query: 534 SKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKA-----QEWDGTPGTPV 588
S+ + T + + RS+S+ + K R SS R K+ + G+ P
Sbjct: 728 SERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPK 787
Query: 589 VTSRLGRCSVSPTLLAGNHSSEPKVSCKL--GRSASTSGVPP--PSVTPLRQS 637
S+ +P + + SS+PK + RS S+S PP S TP RQS
Sbjct: 788 QKSQ------TPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQS 834
Score = 51.2 bits (121), Expect = 3e-06
Identities = 87/376 (23%), Positives = 127/376 (33%), Gaps = 44/376 (11%)
Query: 298 TPTVPDLDFAKASVPCPPKGLLCD---IPPPFPNL-LSHRPPL------LVFP-----PA 342
TPT P ++ A A P L PP N S R P LV P A
Sbjct: 2289 TPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATA 2348
Query: 343 PVHCSPNSDESPLTPLEVTKL---PVLENVS----------YMKQPAGASPSTL------ 383
PV+ + + + L P +T P L + Y + SP L
Sbjct: 2349 PVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSR 2408
Query: 384 -PSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHS---TSPSP 439
P P +++ E+A + S PP R+ P + +P
Sbjct: 2409 TPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTP 2468
Query: 440 VSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHS-TPRPVSQDGAKMVNAAVNTYGAA 498
V+ +SL+ ++ H+G LS +P VPHS P + GA+ +A A
Sbjct: 2469 VAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSA----LAAL 2524
Query: 499 PGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKL 558
R+ +S +S SS S SSSG S + S + P P
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTP 2584
Query: 559 DNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLG 618
KE G P K + + + +S S S + + + SS S
Sbjct: 2585 APKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2644
Query: 619 RSASTSGVPP-PSVTP 633
S+S S P P P
Sbjct: 2645 SSSSPSPAKPGPQALP 2660
Score = 46.6 bits (109), Expect = 7e-05
Identities = 121/555 (21%), Positives = 179/555 (32%), Gaps = 97/555 (17%)
Query: 53 TNLAYLKEKNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSS 112
T L E NEK+ E ++ G +GS R PAP+ P+
Sbjct: 119 TETHQLAELNEKKN---ERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSL-- 173
Query: 113 GFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPER 172
VR S S + +Q K K+D + +SS +SK K R
Sbjct: 174 ---VRESS---------SSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKK--HR 219
Query: 173 TEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMG 232
+E+ +K R H + P PK KR KK R++ P S
Sbjct: 220 SESESKKRKH------RSPTPKSKRKSKD-----------KKRKRSRSTTPAPKSRRAHR 262
Query: 233 SPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSC 292
S + D + R + A+ P G+ + +
Sbjct: 263 STSADSASSSDT------SRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTT 316
Query: 293 SSQCATPTVPDLDFAKASVPCPPKGL-----LCDIPPPFPNLLSHRPPLLVFPPAPVHCS 347
S+Q P+ P+ + S P K P P P S P PPAP
Sbjct: 317 STQ--RPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPE----PPAP---- 366
Query: 348 PNSDESPLTPLEVTKLPVLENVSYMKQPAGASP-STLPSHVPGHAKLEKEQAAALGPASA 406
TPL + E QP +P S P + P A ++++ P
Sbjct: 367 --------TPL------LAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKL 412
Query: 407 TPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGR---SLTPLSLKRPPPYDAVHSG 463
+ SS PPS S H S P+P S +P S R S
Sbjct: 413 PQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNR--------SH 464
Query: 464 SLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAP---GGSRSRTPTSPLEELTSLFSS 520
++ S H+ R + + + + P G SRSR+P +
Sbjct: 465 GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGR 524
Query: 521 GRSLLRKSS---------SGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKER--GHHGAS 569
RS R+ S R+ + +S + RSHS P + ++ R G S
Sbjct: 525 SRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRS 584
Query: 570 SSREPVKAQEWDGTP 584
SR P + + TP
Sbjct: 585 RSRTPARRRSRSRTP 599
Score = 43.1 bits (100), Expect = 8e-04
Identities = 71/283 (25%), Positives = 106/283 (37%), Gaps = 28/283 (9%)
Query: 370 SYMKQPAGASPSTLPSHVPGHAK--LEKEQAAALGPASATPALSSSPPPPSTLYRTQSPH 427
S + + +SP S + L ++ A S +LS S P P ++Q+P
Sbjct: 737 SQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQ--KSQTPP 794
Query: 428 GYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKM 487
+S S+ P S S PPP + S S S PH + +
Sbjct: 795 RRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGS 854
Query: 488 VNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKV 547
+ + + RS +SP EL S R+ R S SG S + ST +
Sbjct: 855 ITSPQANEQSVTPQRRSCFESSPDPELKS-----RTPSRHSCSG-SSPPRVKSSTPPRQS 908
Query: 548 RSHSTEPLPK----LDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLL 603
S S+ P PK + ++R H G+SS P ++ T TP + + CS + L
Sbjct: 909 PSRSSSPQPKVKAIISPRQRSHSGSSS---PSPSRVTSRT--TPRRSRSVSPCSNVESRL 963
Query: 604 AGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVP 646
+S G S+ + V P TP RQS S P
Sbjct: 964 LPRYSHS-------GSSSPDTKVKPE--TPPRQSHSGSISPYP 997
Score = 42.7 bits (99), Expect = 0.001
Identities = 71/288 (24%), Positives = 100/288 (34%), Gaps = 23/288 (7%)
Query: 338 VFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQ 397
V P A SD SP + + T+ P+ + P S S L P ++
Sbjct: 1547 VKPSASPQERSESDSSPDSKAK-TRTPLRQRSRSGSSPEVDSKSRLS---PRRSRSGSSP 1602
Query: 398 AAALGPASATPALS---SSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRP 454
P +A A S SSP P + R S S P G S T S + P
Sbjct: 1603 EVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHP 1662
Query: 455 PPYDAVHSGSLSRSSPSVPHSTP--RPVSQDGAKMVNAA--VNTYGAAPGGSRSRTPTSP 510
P GS S P TP R S+ ++ A +A +R+ T P
Sbjct: 1663 PKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPP 1722
Query: 511 LEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASS 570
+ SS KS S RR + + T+ R S P P+ + R + S
Sbjct: 1723 RHRRSPSVSSPEP-AEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSR----SRS 1777
Query: 571 SREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLL-------AGNHSSEP 611
RE + G+ TSR + S S + + +G HS P
Sbjct: 1778 RREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSP 1825
Score = 38.9 bits (89), Expect = 0.015
Identities = 51/212 (24%), Positives = 77/212 (36%), Gaps = 21/212 (9%)
Query: 347 SPNSDESPLTPLEVTKLPVLENVSYMKQPA-------GASPSTLPSHVPGHAKLEKEQAA 399
S +S S + E + LPV V+ + P+ P P K ++
Sbjct: 2552 SSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSS 2611
Query: 400 ALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSL--TPLSLKRPPPY 457
+ +S++ + SSS S+ + S S S+SPSP G P S K+PPP
Sbjct: 2612 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPP- 2670
Query: 458 DAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSL 517
G SP P + R D + + V +P S +S E +
Sbjct: 2671 -----GERRSRSPRKPIDSLR----DSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRR 2721
Query: 518 FSSGRSLLRKSSSGRRSKEPAEKSTEELKVRS 549
G S R S RR + P+ + RS
Sbjct: 2722 GQRGDS--RSPSHKRRRETPSPRPMRHRSSRS 2751
Score = 38.5 bits (88), Expect = 0.020
Identities = 67/291 (23%), Positives = 103/291 (35%), Gaps = 49/291 (16%)
Query: 347 SPNSDESPLTP-----LEVTKLPVLENVSYMKQP-AGASPSTLPSHVPGHAKLEKEQAAA 400
SP ++E +TP E + P L++ + + +G+SP + S P
Sbjct: 857 SPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQ--------- 907
Query: 401 LGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAV 460
+P+ SSSP P + SP S S+SPSP + TP + P V
Sbjct: 908 ------SPSRSSSPQPK--VKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNV 959
Query: 461 ---------HSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPL 511
HSGS S + P + PR P S S++P
Sbjct: 960 ESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQE 1019
Query: 512 EELTSLFSSGRSLLRKSSSGRRSKEPAEK----STEELK--------VRSHSTEPLPKLD 559
+ SL S L + + S P E S+ +LK RS ++ P +
Sbjct: 1020 KSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQS 1079
Query: 560 NKERGHHGASSSREPVKAQEWDGTPGTPV-----VTSRLGRCSVSPTLLAG 605
+ E + S P + +P T + + G S SP L +G
Sbjct: 1080 HSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLKSG 1130
Score = 38.5 bits (88), Expect = 0.020
Identities = 129/601 (21%), Positives = 209/601 (34%), Gaps = 95/601 (15%)
Query: 100 PAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSC-----------GSRRQPPPKPK-RDP 147
PAP+ LP SG S + + G + +SS GSR P PK K R P
Sbjct: 1627 PAPR-ALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTP 1685
Query: 148 STKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSF 207
+ S+ S S K+ + AS+ P S PP+ +R+P S S
Sbjct: 1686 PRRRSSRS---SPELTRKARLSRRSRSASSSPETRSR------TPPRHRRSP----SVSS 1732
Query: 208 DETYIKKHGPRR---TSLPRDSSLSQMG-SPAGDPEEEEPVYIEMVGNILRDFRKEDDDQ 263
E K RR S PR + S+ G SP+ P + R R+ D
Sbjct: 1733 PEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSG 1792
Query: 264 S--EAVYEEMKYPIFDDLGQDAKCDFDHHSCS---------------SQCATPTVPDLDF 306
S + + + + +HS S + TP
Sbjct: 1793 SSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRS 1852
Query: 307 AKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVL 366
+ P P K P R PL+ S S +P+ +
Sbjct: 1853 RSRTSPAPWKRSRSRASPATHRRSRSRTPLI---------SRRRSRSRTSPVSRRRSRSR 1903
Query: 367 ENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSP 426
+V+ + + ASP + + + ++ + P + + S +PP R+++P
Sbjct: 1904 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTP 1963
Query: 427 HGYPKSHSTSPSPVSMGRS---LTPLSLKRPPPYDAVHSGSLSRSSPSV---PHSTPRPV 480
+ + SP++ RS +P++ +R S SR+SP S PV
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRRR----------SRSRTSPVTRRRSRSRTSPV 2013
Query: 481 SQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTS-----LFSSGRSLLRKSSSGRRS- 534
++ ++ T A SRSRTP P + S + RS +++ G+RS
Sbjct: 2014 TRRRSRS-----RTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSL 2068
Query: 535 --KEPA---EKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVV 589
PA ++ RS S P R H G+ + + + +
Sbjct: 2069 TRSPPAIRRRSASGSSSDRSRSATP-----PATRNHSGSRTPPVALNSSRMSCFSRPSMS 2123
Query: 590 TSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSSL 649
+ L RC SP +L SS +S S P P + P Q + + ++ S +
Sbjct: 2124 PTPLDRCR-SPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRI-PDHQRTSVPENHAQSRI 2181
Query: 650 A 650
A
Sbjct: 2182 A 2182
Score = 35.4 bits (80), Expect = 0.17
Identities = 63/261 (24%), Positives = 93/261 (35%), Gaps = 39/261 (14%)
Query: 325 PFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLP 384
P P+ S + L+ PV S + + T ++ + PA P +
Sbjct: 2450 PVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVA---TTTSSAGDHNGMLSVPAPGVPHSDV 2506
Query: 385 SHVPGHAKLEKEQA-AALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMG 443
P ++ A AAL PA + SSS S+ + S S +S S S G
Sbjct: 2507 GEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD-SEG 2565
Query: 444 RSLT---PLSLKR-----PPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTY 495
SL ++LKR P P +AV G RP AK + ++
Sbjct: 2566 SSLPVQPEVALKRVPSPTPAPKEAVREG--------------RPPEPTPAKRKRRSSSSS 2611
Query: 496 GAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPL 555
++ S S + +S +S SS S SSS S PA+ + L + +P
Sbjct: 2612 SSSSSSSSSSSSSSSSSSSSSSSSSSSS--SSSSSSSSSPSPAKPGPQALPKPASPKKPP 2669
Query: 556 PKLDNKERGHHGASSSREPVK 576
P G SR P K
Sbjct: 2670 P----------GERRSRSPRK 2680
Score = 33.5 bits (75), Expect = 0.63
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 29/129 (22%)
Query: 137 RQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEAS------------------AK 178
R P P P + S+SS + SS+++S S + + +S AK
Sbjct: 2594 RPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK 2653
Query: 179 PRPHS--DEYSKKIPPPKPKRNPNTQL-------STSFDETYIKKHGPRRTSLPRD--SS 227
P P + S K PPP +R+ + + S S + +++ P PRD SS
Sbjct: 2654 PGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSS 2713
Query: 228 LSQMGSPAG 236
S+ GS G
Sbjct: 2714 SSERGSRRG 2722
Score = 32.7 bits (73), Expect = 1.1
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 95 GFMTMPAPQDRLPH------PCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPS 148
G +++PAP +PH P S+G S + SS S S
Sbjct: 2492 GMLSVPAPG--VPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSS 2549
Query: 149 TKLSTSSETVSSTAASKSGKTPERTEASAK----PRPHSDEYSKKIPPPKP---KRNPNT 201
+ S+SS + SS++ S+ P + E + K P P E ++ PP+P KR +
Sbjct: 2550 S--SSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRS 2607
Query: 202 QLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEP 243
S+S + +S SS S S + P
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSP 2649
Score = 31.2 bits (69), Expect = 3.1
Identities = 42/183 (22%), Positives = 61/183 (33%), Gaps = 24/183 (13%)
Query: 454 PPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEE 513
P PY V S SRS P P + K + + ++P R ++
Sbjct: 168 PKPYSLVRESSSSRS--------PTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHR 219
Query: 514 LTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSRE 573
S S RK S + + KS ++ + RS ST P PK R S+S
Sbjct: 220 -----SESESKKRKHRSP--TPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSS 272
Query: 574 PVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHS------SEPKVSCKLGRSASTSGVP 627
T+ GR SP+ +G SEP + S+ +
Sbjct: 273 DTSRSRSRSAAAKTHTTALAGR---SPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATK 329
Query: 628 PPS 630
PS
Sbjct: 330 QPS 332
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 51.6 bits (122), Expect = 2e-06
Identities = 59/229 (25%), Positives = 85/229 (37%), Gaps = 24/229 (10%)
Query: 323 PPPF---PNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGAS 379
PPP P L+H PPL P P + + P++P V PV K +
Sbjct: 1195 PPPAEPPPTDLAHLPPL----PPPEGEARKPAKPPVSPKPVLTQPV------PKLQGSPT 1244
Query: 380 PSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSP 439
P++ +PG E ++A P P PPPP+ ++ G P S S PSP
Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPP----PVSPKPPPPPTAPKPVKAVAGLP-SGSAGPSP 1299
Query: 440 VSMGRSLTPLSLKRPPPYDAVHSGSLSRS-SPS-----VPHSTPRPVSQDGAKMVNAAVN 493
P +L +PP S ++ SP VP PR + A
Sbjct: 1300 APSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAP 1359
Query: 494 TYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKST 542
GA+PG S + L + + +R+ + AEKST
Sbjct: 1360 PEGASPGDSARQKLEETSACLAAALQAVEEKIRQEDAQGPRDSAAEKST 1408
Score = 33.5 bits (75), Expect = 0.63
Identities = 38/127 (29%), Positives = 42/127 (33%), Gaps = 14/127 (11%)
Query: 385 SHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGR 444
S G +L A P + L PPP + P PK T P P G
Sbjct: 1183 SEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQG- 1241
Query: 445 SLTPLSLKRPPPYDAVHSGSLSRSSPSV--PHSTPRPVSQDGAKMVNA--AVNTYGAAPG 500
S TP S K P P SP V H TP PVS A V P
Sbjct: 1242 SPTPTSKKVPLP---------GPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPS 1292
Query: 501 GSRSRTP 507
GS +P
Sbjct: 1293 GSAGPSP 1299
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 51.2 bits (121), Expect = 3e-06
Identities = 75/310 (24%), Positives = 115/310 (37%), Gaps = 35/310 (11%)
Query: 139 PPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRN 198
PPP P T T S +K + PE A+ P P PPP P
Sbjct: 800 PPPPSGATPPPIAPTGPPTASPPVPAK--EEPEELPAAPGPLPPPP------PPPPPVPG 851
Query: 199 PNTQLSTSF-DETYIKKHGPRRTSLPRDSSLSQMGSP--AGDPEEEEPVYIEMVGNILRD 255
P T E GP +L D ++ + S + EEEE E D
Sbjct: 852 PVTLPPPQLVPEGTPGGGGP--PALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEED 909
Query: 256 FRKEDDDQSEAVYEEMKYPI-----FDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKAS 310
F +E++D+ E EE + F++ + + + + + V DL+F A
Sbjct: 910 FEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAG 969
Query: 311 VPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVS 370
G + + PP P L PP L P +P P + P LEV + E
Sbjct: 970 ------GEVEEGAPPPPTL----PPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEE--- 1016
Query: 371 YMKQPAGASPSTLPSHVPGHAKLEKE-QAAALGPASATPALSSSPPPPSTLYRTQSPHGY 429
++ A +P+ P +P ++E+E ++ A GP + P P TL ++ G
Sbjct: 1017 --ERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQE-LVEEEPSAPPTLLEEETEDGS 1073
Query: 430 PKSHSTSPSP 439
K +P
Sbjct: 1074 DKVQPPPETP 1083
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 51.2 bits (121), Expect = 3e-06
Identities = 137/606 (22%), Positives = 202/606 (33%), Gaps = 100/606 (16%)
Query: 106 LPHPCSSGFS--VRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAA 163
LP P +SG S + + + GT + G R P P P+T ++T
Sbjct: 1331 LPTPATSGTSPTLPKSTNQELPGTTATQTTGPR--PTPASTTGPTTPQPGQPTRPTATET 1388
Query: 164 SKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLS---------TSFDETYIKK 214
+++ T TE + PH+ P P P T S S ET +
Sbjct: 1389 TQTRTT---TEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPT 1445
Query: 215 HGPR-RTSLPRDSSLS-------QMGSPAGDPEEEE-----PVYIEMVGNILR----DFR 257
H P TSL S+ + QM + A + P ++ G+
Sbjct: 1446 HVPPFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPPPTTLKATGSTHTAPPITPT 1505
Query: 258 KEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTV-PDLDFAKASVPCPPK 316
Q+ + + K P + HH + +T T+ P+ + P
Sbjct: 1506 TSGTSQAHSSFSTNKTPT----SLHSHTSSTHHPEVTPTSTTTITPNPTSTRTRTPVAHT 1561
Query: 317 GLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPA 376
PP P +H PP SP S P+T S+ +
Sbjct: 1562 NSATSSRPP-PPFTTHSPP--------TGSSPFSSTGPMTATSFKTTTTYPTPSHPQ--- 1609
Query: 377 GASPSTLPSHVPG----------HAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSP 426
+TLP+HVP H + A AS + + PPP+TL T S
Sbjct: 1610 ----TTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASIHSMPTGTIPPPTTLKATGST 1665
Query: 427 HGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLS-----RSSPSVPHSTPRPVS 481
H P T + G S SL ++HS + S +S S + TP P S
Sbjct: 1666 HTAPTMTLT-----TSGTSQALSSLNTAKTSTSLHSHTSSTHHAEATSTSTTNITPNPTS 1720
Query: 482 QDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRK--SSSGRRSKEPAE 539
M V T G S+SR+ S + TSL S S +S+ S P
Sbjct: 1721 TGTPPM---TVTTSGT----SQSRSSFSTAKTSTSLHSHTSSTHHPEVTSTSTTSITPNH 1773
Query: 540 KSTEELKVRSHSTE------PLPKLDNKERGHHGASSSREPVKAQEWD-----GTPGTPV 588
ST +H+T P P + SS PV A + TP P
Sbjct: 1774 TSTGTRTPVAHTTSATSSRLPTPFTTHSPPTGTTPISSTGPVTATSFQTTTTYPTPSHPH 1833
Query: 589 VTSRLGRCSVSPTLLA-GNHSSEPKVSCKLGRSAS-----TSGVPPPSVTPLRQSSDLQQ 642
T S S +L+ H+ ++ SAS T +PPP+ S+
Sbjct: 1834 TTLPTHVPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAP 1893
Query: 643 SQVPSS 648
P++
Sbjct: 1894 PMTPTT 1899
Score = 42.0 bits (97), Expect = 0.002
Identities = 63/299 (21%), Positives = 109/299 (36%), Gaps = 63/299 (21%)
Query: 347 SPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASA 406
SP+S+ +P +P T+ P+L P+TL S P + E + +
Sbjct: 1239 SPSSNHTPASP---TQTPLL-------------PATLTSSKPTASSGEPPRPT----TAV 1278
Query: 407 TPALSSSPPPPSTLYRTQSPHGYPK------SHSTSPSPVSMGRSLTPLSLKRPPPYDAV 460
TP +S PP +TL T + + + + SP+ S +S T ++ P P
Sbjct: 1279 TPQATSGLPPTATLRSTATKPTVTQATTRATASTASPATTSTAQSTTRTTMTLPTP---- 1334
Query: 461 HSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSS 520
+ S +SP++P ST + + A T G P + + PT+P
Sbjct: 1335 ---ATSGTSPTLPKSTNQELPG------TTATQTTGPRPTPASTTGPTTP---------- 1375
Query: 521 GRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEW 580
G+ ++ A ++T+ ++T P + S PV A +
Sbjct: 1376 --------QPGQPTRPTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSF 1427
Query: 581 DG-----TPGTPVVTSRLGRCSVSPTLLA-GNHSSEPKVSCKLGRSASTSGVPPPSVTP 633
TP P T S +L+ H+ ++ SAS P ++ P
Sbjct: 1428 HATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPP 1486
Score = 41.6 bits (96), Expect = 0.002
Identities = 75/334 (22%), Positives = 112/334 (33%), Gaps = 51/334 (15%)
Query: 322 IPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPS 381
+P PF +H PP SP S P+T S+ + +
Sbjct: 1962 LPTPFT---THSPP--------TGSSPFSSTGPMTATSFQTTTTYPTPSHPQ-------T 2003
Query: 382 TLPSHVPG----------HAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYP- 430
TLP+HVP H + AS + + PPP+TL T S H P
Sbjct: 2004 TLPTHVPPFSTSLVTPSTHTVIITTHTQMATSASIHSTPTGTVPPPTTLKATGSTHTAPP 2063
Query: 431 ---------KSHS-----TSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHST 476
++HS T+ S S P + PP + + SS + P ST
Sbjct: 2064 MTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNSSSRPPSSPITTQLPHLSSATTPVST 2123
Query: 477 PRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKE 536
+S + +A P S +SP +S F S SSG S
Sbjct: 2124 TNQLSSSFSPSPSAPSTVSSYVPSSHSSPQTSSPSVGTSSSFVSAPVHSTTLSSGSHSSL 2183
Query: 537 PAEKSTEELKVRS-HSTEPLPKLDNKERGHHGAS-----SSREPVKAQEWDGTPGTPVVT 590
+T + + P + H S S+ P+ TP + + +
Sbjct: 2184 STHPTTASVSASPLFPSSPAASTTIRATLPHTISSPFTLSALLPISTVTVSPTPSSHLAS 2243
Query: 591 SRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTS 624
S + S +P A H++ P S + S STS
Sbjct: 2244 STIAFPS-TPRTTASTHTA-PAFSSQSTTSRSTS 2275
Score = 40.8 bits (94), Expect = 0.004
Identities = 68/301 (22%), Positives = 108/301 (35%), Gaps = 73/301 (24%)
Query: 327 PNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSH 386
P S RPP SP + + P T + +S P+ ++PST+ S+
Sbjct: 2095 PQNSSSRPP----------SSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSY 2144
Query: 387 VPGHAKLEKEQAAALGPASA------------------------TPALSSSP-----PPP 417
VP + + ++G +S+ T ++S+SP P
Sbjct: 2145 VPSSHSSPQTSSPSVGTSSSFVSAPVHSTTLSSGSHSSLSTHPTTASVSASPLFPSSPAA 2204
Query: 418 STLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTP 477
ST R PH T SP ++ +L P+S P + H S + + PS P +T
Sbjct: 2205 STTIRATLPH-------TISSPFTLS-ALLPISTVTVSPTPSSHLASSTIAFPSTPRTT- 2255
Query: 478 RPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEP 537
A+ +T AP S T + T + +SG L +G +
Sbjct: 2256 ------------ASTHT---APAFSSQSTTSRSTSLTTRVPTSGFVSLTSGVTGIPTSPV 2300
Query: 538 AEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCS 597
+T + P + HG++ + PV + GTP TS G CS
Sbjct: 2301 TNLTTRH---PGPTLSPTTRFLTSSLTAHGSTPASAPVSSL------GTPTPTSP-GVCS 2350
Query: 598 V 598
V
Sbjct: 2351 V 2351
Score = 35.0 bits (79), Expect = 0.22
Identities = 51/202 (25%), Positives = 67/202 (33%), Gaps = 45/202 (22%)
Query: 322 IPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPS 381
+P PF +H PP +P S P+T S+ +
Sbjct: 1793 LPTPFT---THSPP--------TGTTPISSTGPVTATSFQTTTTYPTPSHPH-------T 1834
Query: 382 TLPSHVPG----------HAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHG--- 428
TLP+HVP H + AS + + PPP+T+ T S H
Sbjct: 1835 TLPTHVPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPP 1894
Query: 429 -YPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKM 487
P + TS SP S + T SL PY SS P TP + K
Sbjct: 1895 MTPTTSGTSQSPSSFSTAKTSTSL----PYHT--------SSTHHPEVTPTSTTNITPKH 1942
Query: 488 VNAAVNTYGA-APGGSRSRTPT 508
+ T A S SR PT
Sbjct: 1943 TSTGTRTPVAHTTSASSSRLPT 1964
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 50.8 bits (120), Expect = 4e-06
Identities = 129/560 (23%), Positives = 182/560 (32%), Gaps = 89/560 (15%)
Query: 99 MPAPQDRLPHPCSSGFSVRSQS----LHSVGGTDDDS-SCGSRRQPPPKPKRDPSTKLST 153
+P PQ SG S S + S G S S ++PPP P+R S L
Sbjct: 452 VPPPQGGSGRGSPSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHS--LHQ 509
Query: 154 SSETVSSTAASKSGKTPERTEASAKPRPHS---DEYSKKIP-PPKPKRNPNTQLSTSFDE 209
V K PER + PRP + E + P PP P + LS
Sbjct: 510 RGLAVPDGPLGLPPK-PERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSR 568
Query: 210 TYIKKHGPRRTSLPRDSSLSQMGSPA----------GDPEEEEPVYIEMVGNILRDFRKE 259
P RT P SQ G+P P + +P E V ++ R
Sbjct: 569 R--PPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSL----RSP 622
Query: 260 DDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLL 319
S ++ + C S + P + + +P PK
Sbjct: 623 GASVSSSL--------------TSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPA 668
Query: 320 CDIPPPF-PNLLSHRPPLLVFP---PAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQP 375
PPP P + P L P P PV + S +SP TP T L L+ + +
Sbjct: 669 PFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQ--TTLTPLQESPVISKD 726
Query: 376 AGASPSTLPSHVPGHAKLEKEQAAALGPASATPALS-----SSPPPPSTLYRTQSPHGYP 430
PS PS+ P +K + P+++ A + PPPP
Sbjct: 727 QSPPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPP------------ 774
Query: 431 KSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNA 490
P+P S+ PPP +A S ++ P+ P +P VS A ++
Sbjct: 775 ------PAPEEQDLSMADF----PPPEEAFFS--VASPEPAGPSGSPELVSSPAAS--SS 820
Query: 491 AVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSH 550
+ P GS P P S + L + KEP S R
Sbjct: 821 SATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQ-------KEPVGCSKGGGPPRED 873
Query: 551 STEPL--PKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHS 608
PL P L R + P A P P+ + GR S P +G H+
Sbjct: 874 VGAPLVTPSLLQMVRLRSVGAPGGAPTPALG-PSAPQKPLRRALSGRASPVPAPSSGLHA 932
Query: 609 SEPKVSCKLGRSASTSGVPP 628
+ +C L S S P
Sbjct: 933 AVRLKACSLAASEGLSSAQP 952
Score = 38.1 bits (87), Expect = 0.026
Identities = 52/167 (31%), Positives = 70/167 (41%), Gaps = 45/167 (26%)
Query: 403 PASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSM---------GRSLTPLSLKR 453
P S+T + S PPP S G P ST+ + ++ GRS++ LKR
Sbjct: 442 PESSTASNSVVPPPQGG-----SGRGSPSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKR 496
Query: 454 PPPYDAVHSGSLSRSSPSVPH---------------STPRPVSQDGAKMVNAA------V 492
PPP + SL + +VP PRP + G++ AA
Sbjct: 497 PPP-PPRRTHSLHQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPA 555
Query: 493 NTY--GAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEP 537
N++ G +PGGSR R P SP E T SSG S S SG + P
Sbjct: 556 NSWVPGLSPGGSR-RPPRSP--ERTLSPSSGYS----SQSGTPTLPP 595
Score = 31.2 bits (69), Expect = 3.1
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 593 LGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSSLAN 651
LGRCS+ HS+ P LGR +S S P S P S SQ ++ +
Sbjct: 369 LGRCSLRTLSRCSLHSASPASVRSLGRFSSVSSPQPRSRHPSSSSDTWSHSQSSDTIVS 427
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 50.8 bits (120), Expect = 4e-06
Identities = 76/258 (29%), Positives = 93/258 (36%), Gaps = 48/258 (18%)
Query: 322 IPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPS 381
+PPPF PPL PP + P S P+ P LP V P P
Sbjct: 516 MPPPFVPYSQMPPPLPTMPPPVL---PPSLPPPVMP---PALPA--TVPPPGMPPPVMPP 567
Query: 382 TLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVS 441
+LP+ VP +A P P+LSS+ PPP P P ST+P PV
Sbjct: 568 SLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPP-----VLPP---PSLSSTAPPPV- 618
Query: 442 MGRSLTPLSLKRPPP----------------YDAVHSGSLSRSS--PSVPHST--PRPVS 481
L PLS PPP V S S+SS P P P PVS
Sbjct: 619 --MPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVS 676
Query: 482 QDGAKMVNAAVNTYGAAPGGS-RSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEK 540
A A P S+ P S S FSS + L G S P++
Sbjct: 677 FGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGL------GESSAAPSQP 730
Query: 541 ST--EELKVRSHSTEPLP 556
T +++ VRS P P
Sbjct: 731 ITAVKDMPVRSGGLLPDP 748
Score = 35.8 bits (81), Expect = 0.13
Identities = 55/244 (22%), Positives = 79/244 (32%), Gaps = 24/244 (9%)
Query: 331 SHRPPLLVFPPAPV---HCSP----NSDESPLTP----------LEVTKLPVLENVSYMK 373
SH PP V PP PV SP +S +P P + +L L+ + +
Sbjct: 12 SHYPPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQKQ 71
Query: 374 QPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSH 433
P LP P G P PP P+ Y+ Q + + H
Sbjct: 72 MQCVLQPHHLPP--PPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLH 129
Query: 434 STSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPS-VPHSTPRPVSQDGAKMVNAAV 492
P L P+ L+ PP V GS S S +P P P
Sbjct: 130 HQRDGP----PGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLP 185
Query: 493 NTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHST 552
+ S++ +P +S SS +S L S S S + + + +S
Sbjct: 186 PAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLL 245
Query: 553 EPLP 556
P P
Sbjct: 246 APPP 249
Score = 35.8 bits (81), Expect = 0.13
Identities = 59/213 (27%), Positives = 77/213 (36%), Gaps = 33/213 (15%)
Query: 299 PTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESP-LTP 357
P +P + P PP +PPP LS++ H D P L P
Sbjct: 90 PVMPGGGYGDWQPPPPP------MPPPPGPALSYQKQQQYKHQMLHH---QRDGPPGLVP 140
Query: 358 LEVTKLPVLENV---SYM--KQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSS 412
+E+ P V SYM Q P PS+ P + A P+ + P+ S
Sbjct: 141 MELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSY 200
Query: 413 SPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGS--LSRSSP 470
P PS Y S S+S S +S +S P S P HS S L+ P
Sbjct: 201 LAPTPS----------YSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPP 250
Query: 471 SVPHSTPRPVSQD----GAKMVNAAVNTYGAAP 499
S P V Q+ GAK N + AAP
Sbjct: 251 SAPPGNKTTVQQEPLESGAK--NKSTEQQQAAP 281
Score = 35.4 bits (80), Expect = 0.17
Identities = 47/221 (21%), Positives = 73/221 (33%), Gaps = 47/221 (21%)
Query: 312 PCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSD------ESPLTPLEVTKLPV 365
P PP +PPP P L P + + +P+S E L L+ +
Sbjct: 15 PPPP------VPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMH 68
Query: 366 LENVSYMKQPAGASPSTLPSH--VPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRT 423
+ + + QP P LP +PG G P PP P+ Y+
Sbjct: 69 QKQMQCVLQPHHLPPPPLPPPPVMPG---------GGYGDWQPPPPPMPPPPGPALSYQK 119
Query: 424 QSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSL------------------ 465
Q + + H P L P+ L+ PP V GS
Sbjct: 120 QQQYKHQMLHHQRDGPPG----LVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYY 175
Query: 466 --SRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRS 504
+ S P +P + P P ++ A +Y ++ S+S
Sbjct: 176 PPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQS 216
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 50.4 bits (119), Expect = 5e-06
Identities = 85/321 (26%), Positives = 117/321 (36%), Gaps = 47/321 (14%)
Query: 291 SCSSQCATPTVP---DLDFAKASVPCPPKG---LLCDIPPPFPNLLSHRPPLLVFPPAPV 344
S S ATP P A P PP +L P P L S + P+ V P+
Sbjct: 1578 SASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSST 1637
Query: 345 HCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPA 404
+ + SP+ PVL S PS LPS Q AL PA
Sbjct: 1638 PGTSLASASPVP----APTPVLAPSSTQTMLPAPVPSPLPSPA-------STQTLALAPA 1686
Query: 405 SATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTP-----LSLKRPPPYDA 459
A P L S P + T +P G + + S +P S SL P LSL PP
Sbjct: 1687 LA-PTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPAS---SLVPTPAQTLSLAPGPPLGP 1742
Query: 460 VHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFS 519
+ SL+ + P P S P + A+ + AP ++ T SP T +
Sbjct: 1743 TQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLT-LSPAPVPTLGPA 1801
Query: 520 SGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQE 579
+ ++L +S ++ PA +++ L V + PLP SR PV E
Sbjct: 1802 AAQTLALAPAS---TQSPASQAS-SLVVSASGAAPLPV----------TMVSRLPVSKDE 1847
Query: 580 WD------GTPGTPVVTSRLG 594
D G P P + G
Sbjct: 1848 PDTLTLRSGPPSPPSTATSFG 1868
Score = 48.1 bits (113), Expect = 2e-05
Identities = 88/369 (23%), Positives = 142/369 (38%), Gaps = 56/369 (15%)
Query: 302 PDLDFAKASVPCPP--KGLLCDIPPPFPNLLSHRP---PLLVFPPAPVHCS---PNSDES 353
P L A+A +P P + LL + P P + + P PL + P V S P S
Sbjct: 1356 PTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPM 1415
Query: 354 PLTPLEVTKLPVLENVSYMKQPAGAS-----PSTLPSHVPGHAKLEKEQAAALGPASATP 408
P+ PV VS P +S P+TLP+ P A L +A L +++ P
Sbjct: 1416 PIPNSSPLASPVSSTVSV---PLSSSLPISVPTTLPA--PASAPLTIPISAPLTVSASGP 1470
Query: 409 ALSSSPPPPSTLYRTQSPHG---YPKSHSTSPSPVSMGRSLTP-LSLKRPPPYDAVHSGS 464
AL +S PP +P P S S S +++G + P LS + P + +
Sbjct: 1471 ALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLL---- 1526
Query: 465 LSRSSPSVP--HSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPT-SPLEELTSLFSSG 521
L+ +S VP +ST P +A + + +AP + ++ +P + ++
Sbjct: 1527 LAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATP 1586
Query: 522 RSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWD 581
+ + + + PA PLP L +SS+ PV
Sbjct: 1587 LAPMAAPQTAILAPSPAPPLA-----------PLPVLAPSPGAAPVLASSQTPVPVMAPS 1635
Query: 582 GTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQ 641
TPGT + S SP P + L S++ + +P P +PL + Q
Sbjct: 1636 STPGTSL-------ASASPV---------PAPTPVLAPSSTQTMLPAPVPSPLPSPASTQ 1679
Query: 642 QSQVPSSLA 650
+ +LA
Sbjct: 1680 TLALAPALA 1688
Score = 42.0 bits (97), Expect = 0.002
Identities = 76/319 (23%), Positives = 113/319 (35%), Gaps = 51/319 (15%)
Query: 320 CDIPPPFPNLLSHRPP----LLVFPPAPVHCSPNSDESPLTPLE--VTKLPV-LENVSYM 372
C PP +H PP LV P +P+ P P P+ VT LP+ L + +
Sbjct: 2499 CTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGP-----PSVPISASVTNLPLGLRPEAEL 2553
Query: 373 KQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPA-----------LSSSPPPPS-TL 420
A ASP +L + A E + + P P LS +P PS TL
Sbjct: 2554 CAQALASPESL--ELASVASSETSSLSLVPPKDLLPVAVEILPVSEKNLSLTPSAPSLTL 2611
Query: 421 YRTQSPHGYPKSHSTSPSPVSM-----------------GRSLTPLSLKRPPPYDAVHSG 463
P+G + S ++ G L P + P + + +
Sbjct: 2612 EAGSIPNGQEQEAPDSAEGTTLTVLPEGEELPLCVSESNGLELPPSAASDEPLQEPLEAD 2671
Query: 464 SLSR--SSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSG 521
S + P S+P Q+ AA +T +A +P P TS
Sbjct: 2672 RTSEELTEAKTPTSSPEK-PQELVTAEVAAPSTSSSATSSPEGPSPARPPRRRTSADVE- 2729
Query: 522 RSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWD 581
+R +GR + P K +L R + +L + R GA+S+ P E
Sbjct: 2730 ---IRGQGTGRPGQPPGPKVLRKLPGRLVTVVEEKELVRRRRQQRGAASTLVP-GVSETS 2785
Query: 582 GTPGTPVVTSRLGRCSVSP 600
+PG+P V S G S P
Sbjct: 2786 ASPGSPSVRSMSGPESSPP 2804
Score = 38.9 bits (89), Expect = 0.015
Identities = 76/304 (25%), Positives = 103/304 (33%), Gaps = 54/304 (17%)
Query: 297 ATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCS-PNSDESPL 355
+T T P A+ VP P P P P S + P PV P S +P+
Sbjct: 2422 STTTPPRCSPARERVPRPA-------PRPRPTPASAPAAIPALVPVPVSAPVPISAPNPI 2474
Query: 356 TPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPP 415
T L V LP S + P +SP+ P P + TP + +PP
Sbjct: 2475 TILPVHILPSPPPPSQI--PPCSSPACTP------------------PPACTPPPAHTPP 2514
Query: 416 PPSTLYRTQS------PHGYPKSHSTSPSPVSM--GRSLTPLSLKRPPPYDAVHSGSLSR 467
P T T S P P S S + P+ + L +L P + S
Sbjct: 2515 PAQTCLVTPSSPLLLGPPSVPISASVTNLPLGLRPEAELCAQALASPESLELASVASSET 2574
Query: 468 SSPS-VPHS-------TPRPVSQDGAKMVNAAVN---TYGAAPGGSRSRTPTSPLEELTS 516
SS S VP PVS+ + +A + G+ P G P S +
Sbjct: 2575 SSLSLVPPKDLLPVAVEILPVSEKNLSLTPSAPSLTLEAGSIPNGQEQEAPDSAEGTTLT 2634
Query: 517 LFSSGRSL-LRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPV 575
+ G L L S S P+ S E L+ EPL E + + P
Sbjct: 2635 VLPEGEELPLCVSESNGLELPPSAASDEPLQ------EPLEADRTSEELTEAKTPTSSPE 2688
Query: 576 KAQE 579
K QE
Sbjct: 2689 KPQE 2692
Score = 33.1 bits (74), Expect = 0.83
Identities = 56/217 (25%), Positives = 73/217 (33%), Gaps = 10/217 (4%)
Query: 297 ATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPL- 355
A P P L + AS L P + + PLL+ P + NS +P
Sbjct: 1486 AAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPAC 1545
Query: 356 TPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPP 415
+P+ V + PA A S L L A P +A A S +PP
Sbjct: 1546 SPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPP 1605
Query: 416 PPSTLYRTQSPHGYP-KSHSTSPSPVSMGRSLTPLSLKR----PPPYDAVHSGSLSRSSP 470
SP P + S +P PV S SL P P + S P
Sbjct: 1606 LAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLP 1665
Query: 471 S-VPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRT 506
+ VP P P S + A T G G S S+T
Sbjct: 1666 APVPSPLPSPASTQTLALAPALAPTLG---GSSPSQT 1699
Score = 30.8 bits (68), Expect = 4.1
Identities = 50/187 (26%), Positives = 64/187 (34%), Gaps = 17/187 (9%)
Query: 341 PAPVHCSPNSDESPLTPLEVTKLPVLENVSY------MKQPAGASPSTLPSHVPGHAKLE 394
P PV N P+ E + V+ N ++ P G S P+ P L
Sbjct: 987 PKPVKMKVNRMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPTPGPVPQVLP 1046
Query: 395 KEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTP---LSL 451
+ PA +S PP P L Q G SP V G S P LSL
Sbjct: 1047 ASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSL 1106
Query: 452 KRPPP-----YDAVHSGSLSRSSP-SVP--HSTPRPVSQDGAKMVNAAVNTYGAAPGGSR 503
K PP A GS S P +VP ++ P + + A T AP +
Sbjct: 1107 KPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAP 1166
Query: 504 SRTPTSP 510
R SP
Sbjct: 1167 QRLILSP 1173
Score = 30.4 bits (67), Expect = 5.4
Identities = 42/160 (26%), Positives = 54/160 (33%), Gaps = 19/160 (11%)
Query: 101 APQDRLPHPCSSGFSVRSQ-SLHSVGGTDDDSSCGS-----------RRQPPPKPKRDPS 148
AP LP P F R L GG ++ G+ RR PPK R P+
Sbjct: 2812 APSSSLPTPPQQPFIARRHIELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPA 2871
Query: 149 TKLSTSSETVSSTAASK-SGKTP---ERTEASAKPRPHSDEYSKKIP-PPKPKRNPNTQL 203
E SST K +G P T A P P P+P PN L
Sbjct: 2872 DAGRGVDEAPSSTLKGKTNGADPVPGPETLIVADPVLEPQLIPGPQPLGPQPVHRPNPLL 2931
Query: 204 STSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEP 243
S E + P+ LP ++S G + + P
Sbjct: 2932 SPV--EKRRRGRPPKARDLPIPGTISSAGDGNSESRTQPP 2969
Score = 30.4 bits (67), Expect = 5.4
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 323 PPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV-TKLPVLENVSYMKQPAGASPS 381
PPP P+ L+ PPLLV P A V + +T + + T P + K P PS
Sbjct: 2968 PPPHPSPLTPLPPLLVCPTATV-------ANTVTTVTISTSPPKRKRGRPPKNPPSPRPS 3020
Query: 382 TLP 384
LP
Sbjct: 3021 QLP 3023
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 50.4 bits (119), Expect = 5e-06
Identities = 129/564 (22%), Positives = 186/564 (32%), Gaps = 81/564 (14%)
Query: 47 DRLRNETNLAYLKEKNEKRRRQEEAIKRIGGEVG--RGHEGSYVGKHFRMGFMTMPAPQD 104
D ET L+ LKEK +KR +EE + G+ R H+ S G + P
Sbjct: 40 DPCAKETVLSALKEKEKKRTVEEEDQIFLDGQENKRRRHDSSGSGHSAFEPLVANGVPAS 99
Query: 105 RLPHPCSSGFSVRSQS----LHSVGGTDDDSS-CGSRRQPPPKPKRDPSTKLSTSSETVS 159
+P P S + SQS L+ + SS G+ P R+ T +S+ +S
Sbjct: 100 FVPKPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYASGIPSSSRNAITSSYSSTRGIS 159
Query: 160 -------------STAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTS 206
S+ AS +TPER + S P + +Q +
Sbjct: 160 QLWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADR---ESQGEKA 216
Query: 207 FDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEA 266
D T KK S P S + E + + + ED D +
Sbjct: 217 ADTTPRKKQNSNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKK 276
Query: 267 VYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFA----KASVPCPPKGLLCDI 322
+ +D A +S TP + F A+ PP LL
Sbjct: 277 ASLQWFNQALEDKSDAAS--------NSVTETPPITQPSFTFTLPAAAPASPPTSLLAPS 328
Query: 323 PPPFPNLLS--HRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASP 380
P L PP L PP P + E+ P + LP P G S
Sbjct: 329 TNPLLESLKKMQTPPSL--PPCPESAGAATTEALSPPKTPSLLP----------PLGLSQ 376
Query: 381 STLPSHVPGHAKLEKEQAAALG--PA-SATPALSSSPPP------PSTLYRTQSPHGYPK 431
S P +P + K LG PA S PA + PP + T +P PK
Sbjct: 377 SGPPGLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAETATKPQATSAPSPAPK 436
Query: 432 ------SHSTSP-SPVSMGRSLTPLSLK-------------RPPPYDAVHSGSLSRSSPS 471
+ +TSP SP + S P K PP +V + + S SS
Sbjct: 437 QSFLFGTQNTSPSSPAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLP 496
Query: 472 VPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLF---SSGRSLLRKS 528
ST P Q + + AP ++ TP + LF +S S +
Sbjct: 497 TTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPI 556
Query: 529 SSGRRSKEPAEKSTEELKVRSHST 552
+S S + A K + S S+
Sbjct: 557 TSASPSTDSASKPAFGFGINSVSS 580
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 49.3 bits (116), Expect = 1e-05
Identities = 55/199 (27%), Positives = 70/199 (35%), Gaps = 39/199 (19%)
Query: 310 SVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPA-------PVHCSPNSDESPLTPLEVTK 362
S P PP IPPP P+ +PP PP P H P+ + P P + +
Sbjct: 54 SGPKPP------IPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSS 107
Query: 363 LPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYR 422
PV+ G++P S P + P + P + +PPP T
Sbjct: 108 KPVVAQGPGPAPGVGSAPPASSSAPPA------TPPTSGAPPGSGPGPTPTPPPAVT--- 158
Query: 423 TQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQ 482
+P G P P+P S G TP PPP A G P P P P
Sbjct: 159 -SAPPGAPP-----PTPPSSGVPTTPPQAGGPPPPPAAVPG----PGPG-PKQGPGPGGP 207
Query: 483 DGAKMVNAAVNTYGAAPGG 501
G KM G PGG
Sbjct: 208 KGGKMPG------GPKPGG 220
Score = 37.0 bits (84), Expect = 0.057
Identities = 33/127 (25%), Positives = 40/127 (31%), Gaps = 12/127 (9%)
Query: 388 PGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRT----QSPHGYPKSHSTSPSPVSMG 443
PG + GP + P PPPP + Q P P H P P
Sbjct: 36 PGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQ 95
Query: 444 RSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSR 503
+ P PPP D+ P+ + P S A T GA PG
Sbjct: 96 QQQPP-----PPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPP---ATPPTSGAPPGSGP 147
Query: 504 SRTPTSP 510
TPT P
Sbjct: 148 GPTPTPP 154
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 48.5 bits (114), Expect = 2e-05
Identities = 105/535 (19%), Positives = 168/535 (31%), Gaps = 80/535 (14%)
Query: 122 HSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRP 181
HSV + SS S ++ S+K S ++ + K K RT+ P+P
Sbjct: 117 HSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKK-NRTKKKPTPKP 175
Query: 182 HS--------DEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGS 233
D K+ P + ++STS T K PR SLP +S S+ S
Sbjct: 176 PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPR-PSLPPNSDTSKETS 234
Query: 234 PAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCS 293
+ E +E + + D + + AK S
Sbjct: 235 LTVNKETT----VETKETTTTNKQTSTDGKEKTT--------------SAKETQSIEKTS 276
Query: 294 SQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDES 353
++ PT L KG P L P P +P S
Sbjct: 277 AKDLAPTSKVLAKPTPKAETTTKG-----------------PALTTPKEPTPTTPKEPAS 319
Query: 354 PLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSS 413
TP E T + + K+PA + + P+ A ++ A P P +
Sbjct: 320 T-TPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKE 378
Query: 414 PPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVP 473
P P +T +P + P+P + + P + K P P ++P P
Sbjct: 379 PAPTTTKSAPTTPKEPAPTTPKKPAPTT-PKEPAPTTPKEPTP-----------TTPKEP 426
Query: 474 HSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRR 533
T + + K AP + PT+P E + K S
Sbjct: 427 APTTKEPAPTTPK---------EPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTT 477
Query: 534 SKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRL 593
KEPA +T+ + + EP P ++ +EP + P TP +
Sbjct: 478 PKEPAPTTTK--SAPTTTKEPAPTTTKS-----APTTPKEPSPTTTKEPAPTTPKEPAPT 530
Query: 594 GRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSS 648
+PT + PK A T+ P TP + + P++
Sbjct: 531 TPKKPAPTTPKEPAPTTPK------EPAPTTTKKPAPTTPKEPAPTTPKETAPTT 579
Score = 47.4 bits (111), Expect = 4e-05
Identities = 99/505 (19%), Positives = 162/505 (32%), Gaps = 52/505 (10%)
Query: 137 RQPPPKPKRDPSTKLSTSSETV----SSTAASKSGKTPERTEASAKPRPHSDEYSKKIPP 192
++P P ++P+ + T + TA K T + A P+ + +K+ P
Sbjct: 416 KEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 475
Query: 193 PKPKRNPNTQLSTSFDETYIKKHGPRRT----SLPRDSSLSQMGSPAGD-PEEEEPVYIE 247
PK T +T T K+ P T + P++ S + PA P+E P +
Sbjct: 476 TTPKEPAPT--TTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 533
Query: 248 MVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDL--- 304
+ A K + + + TPT P+
Sbjct: 534 KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP 593
Query: 305 DFAKASVPCPPKGLLCDIP----PPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEV 360
+ P P+ L P P P + P P P +P + + P
Sbjct: 594 TTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPK 653
Query: 361 TKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL 420
P + P G +P+TL P K + A + + P P+T
Sbjct: 654 EPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTT- 712
Query: 421 YRTQSPHGYPKSHSTSPSPV-------SMGRSLTPLSLKRPPPYDAVHSGSLSRSSPS-- 471
P G + P+P + + P +LK P P + + +P
Sbjct: 713 -----PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP------TTPKKPAPKEL 761
Query: 472 VPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSG 531
P +T P S K A AP + PT+P + + + + S+
Sbjct: 762 APTTTKGPTSTTSDK--PAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 819
Query: 532 RRSKEPA------EKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPG 585
+KEP ++ST EL S EP PK G +++ P + T
Sbjct: 820 TTTKEPTTIHKSPDESTPEL-----SAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTA 874
Query: 586 TPVVTSRLGRCSVSPTLLAGNHSSE 610
T R R + T A + E
Sbjct: 875 KDKTTERDLRTTPETTTAAPKMTKE 899
Score = 46.2 bits (108), Expect = 9e-05
Identities = 114/537 (21%), Positives = 178/537 (33%), Gaps = 89/537 (16%)
Query: 120 SLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKP 179
SL T ++S ++ + K +T TS++ T ++K ++ E+T SAK
Sbjct: 222 SLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKT--SAKD 279
Query: 180 RPHSDEYSKKIPPPKPKRNPNTQ---LSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAG 236
+ SK + P PK T+ L+T + T P T+ P++ + + + S
Sbjct: 280 LAPT---SKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT-PKEPTPTTIKSAPT 335
Query: 237 DPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQC 296
P+E P +++ K P + A
Sbjct: 336 TPKEPAPT------------------TTKSAPTTPKEPAPTTTKEPAP------------ 365
Query: 297 ATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLT 356
TP P K P K P P P PAP + +P
Sbjct: 366 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKE 425
Query: 357 PLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPP 416
P TK P + K+PA +P P KE PA TP P
Sbjct: 426 PAPTTKEPA---PTTPKEPAPTAPKKPAPTTP------KE------PAPTTP----KEPA 466
Query: 417 PSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHST 476
P+T T+ P S +T P P + K P P + ++S+P+ P
Sbjct: 467 PTT---TKEP-----SPTTPKEPAPTTTKSAPTTTKEPAP-------TTTKSAPTTP-KE 510
Query: 477 PRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKE 536
P P + A AP + PT+P E + K + KE
Sbjct: 511 PSPTTTKEP----APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 566
Query: 537 PAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSRE---PVKAQEW-DGTPGTPVVTSR 592
PA + +E + PK A ++ E P +E TP P T+
Sbjct: 567 PAPTTPKE------TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTP 620
Query: 593 LGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSSL 649
+P A N EP + + +T P P+ TP + + P++L
Sbjct: 621 EEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT-TPKETAPTTPKGTAPTTL 676
Score = 32.3 bits (72), Expect = 1.4
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 150 KLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPP-KPKRNPNTQLSTSFD 208
K++T+ +T+++T + + E +AKP+ + P P KP + P ST
Sbjct: 943 KVTTTKKTITTT------EIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKP 996
Query: 209 ETYIKKHGPRRTSLPR 224
+T + P+ T PR
Sbjct: 997 KTMPRVRKPKTTPTPR 1012
Score = 31.2 bits (69), Expect = 3.1
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 507 PTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHH 566
PTSP + SG S KS++ R K P +K T+++ TE +N+E
Sbjct: 69 PTSPPSSKKAPPPSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQESSSS 128
Query: 567 GASSS 571
+SSS
Sbjct: 129 SSSSS 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.127 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,665,494
Number of Sequences: 37866
Number of extensions: 2107898
Number of successful extensions: 15126
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 1125
Number of HSP's that attempted gapping in prelim test: 10749
Number of HSP's gapped (non-prelim): 4812
length of query: 653
length of database: 18,247,518
effective HSP length: 109
effective length of query: 544
effective length of database: 14,120,124
effective search space: 7681347456
effective search space used: 7681347456
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.