APC 32372

Name: APC	Sequence: fasta or formatted (2843aa)		NCBI GI: 53759122
Description: adenomatous polyposis coli		Referenced in: Cytoskeleton Additional Interaction Domain Families Wnt Signals
Other entries for this name: alt mRNA [2843aa] adenomatous polyposis coli alt mRNA [2843aa] adenomatous polyposis coli
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 177 5 C cysteine 1.3 38 1 D aspartate 5.2 148 4 E glutamate 7.4 209 4 F phenylalanine 1.7 47 1 G glycine 5.2 147 3 H histidine 2.4 67 2 I isoleucine 4.0 115 2 K lysine 7.0 199 4 L leucine 7.2 205 3 M methionine 2.0 57 1 N asparagine 5.6 158 3 P proline 6.3 179 5 Q glutamine 5.4 154 2 R arginine 5.7 163 2 S serine 15.3 436 6 T threonine 5.9 167 2 V valine 4.0 113 1 W tryptophan 0.5 14 1 Y tyrosine 1.8 50 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 adenomatous polyposis coli APC 1.000 adenomatous polyposis coli APC 1.000 adenomatous polyposis coli APC2 0.152 adenomatosis polyposis coli 2 DSPP 0.013 dentin sialophosphoprotein preproprotein SRRM2 0.012 splicing coactivator subunit SRm300 MUC17 0.012 mucin 17 SRRM1 0.009 serine/arginine repetitive matrix 1 LOC100170229 0.008 hypothetical protein LOC100170229 MUC21 0.008 mucin 21 TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform e... MED1 0.008 mediator complex subunit 1 AFF1 0.008 myeloid/lymphoid or mixed-lineage leukemia trithorax ... TCOF1 0.008 Treacher Collins-Franceschetti syndrome 1 isoform a ... MUC12 0.007 PREDICTED: mucin 12 MUC12 0.007 PREDICTED: mucin 12, cell surface associated MUC6 0.007 mucin 6, gastric KIAA1853 0.007 KIAA1853 protein BAT2D1 0.007 HBxAg transactivated protein 2 MUC12 0.007 PREDICTED: mucin 12 DPCR1 0.007 diffuse panbronchiolitis critical region 1 protein ... MUC12 0.006 PREDICTED: mucin 12 ASXL3 0.006 additional sex combs like 3 TCOF1 0.006 Treacher Collins-Franceschetti syndrome 1 isoform f... GPRIN1 0.006 G protein-regulated inducer of neurite outgrowth 1 ... NEFH 0.006 neurofilament, heavy polypeptide 200kDa TCOF1 0.006 Treacher Collins-Franceschetti syndrome 1 isoform d... NAV3 0.006 neuron navigator 3 MUC16 0.005 mucin 16 AFF4 0.005 ALL1 fused gene from 5q31 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.