Guide to the Human Genome
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Name: FOXP2 Sequence: fasta or formatted (623aa) NCBI GI: 22538413
Description:

forkhead box P2 isoform III

Referenced in:

FOX Family

Other entries for this name:
alt prot [740aa] forkhead box P2 isoform II
alt prot [715aa] forkhead box P2 isoform I
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         37           2
 C cysteine            1.1          7           1
 D aspartate           2.9         18           2
 E glutamate           5.9         37           3
 F phenylalanine       1.6         10           1
 G glycine             4.0         25           2
 H histidine           3.7         23           2
 I isoleucine          4.2         26           1
 K lysine              3.5         22           2
 L leucine             9.8         61           2
 M methionine          2.4         15           2
 N asparagine          4.3         27           2
 P proline             6.6         41           2
 Q glutamine          18.1        113          40
 R arginine            3.5         22           3
 S serine              9.3         58           3
 T threonine           5.5         34           2
 V valine              5.1         32           2
 W tryptophan          0.8          5           1
 Y tyrosine            1.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box P2 isoform III 
FOXP2                 1.000   forkhead box P2 isoform I 
FOXP2                 1.000   forkhead box P2 isoform II 
FOXP1                 0.604   forkhead box P1 isoform 1 
FOXP4                 0.511   forkhead box P4 isoform 3 
FOXP4                 0.498   forkhead box P4 isoform 1 
FOXP4                 0.490   forkhead box P4 isoform 2 
FOXP3                 0.161   forkhead box P3 isoform b 
FOXP3                 0.161   forkhead box P3 isoform a 
MLL2                  0.078   myeloid/lymphoid or mixed-lineage leukemia 2 
MAML2                 0.076   mastermind-like 2 
ZNF853                0.075   zinc finger protein 853 
MED12                 0.075   mediator complex subunit 12 
MED15                 0.072   mediator complex subunit 15 isoform a 
MED15                 0.072   mediator complex subunit 15 isoform b 
TOX3                  0.056   TOX high mobility group box family member 3 isoform...
TOX3                  0.056   TOX high mobility group box family member 3 isoform...
FOXJ1                 0.054   forkhead box J1 
PAXIP1                0.053   PAX interacting protein 1 
TBP                   0.052   TATA box binding protein 
FOXJ3                 0.052   forkhead box J3 
FOXA3                 0.051   forkhead box A3 
FOXK2                 0.048   forkhead box K2 
FOXC2                 0.047   forkhead box C2 
BMP2K                 0.047   BMP-2 inducible kinase isoform a 
BMP2K                 0.047   BMP-2 inducible kinase isoform b 
TCHH                  0.047   trichohyalin 
FOXN2                 0.046   T-cell leukemia virus enhancer factor 
FOXN3                 0.045   checkpoint suppressor 1 isoform 1 
FOXN3                 0.045   checkpoint suppressor 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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