Guide to the Human Genome
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Name: MAGIX Sequence: fasta or formatted (258aa) NCBI GI: 153070252
Description:

MAGI family member, X-linked isoform c

Referenced in:

PDZ Domain

Other entries for this name:
alt prot [262aa] MAGI family member, X-linked isoform b
alt prot [253aa] MAGI family member, X-linked isoform d
alt prot [334aa] MAGI family member, X-linked isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         30           3
 C cysteine            0.0          0           0
 D aspartate           4.7         12           1
 E glutamate           5.8         15           2
 F phenylalanine       0.0          0           0
 G glycine            10.1         26           2
 H histidine           3.1          8           1
 I isoleucine          2.3          6           1
 K lysine              2.3          6           2
 L leucine             8.5         22           2
 M methionine          0.8          2           1
 N asparagine          1.2          3           1
 P proline            12.0         31           2
 Q glutamine           3.5          9           1
 R arginine           12.4         32           3
 S serine              8.5         22           3
 T threonine           5.0         13           2
 V valine              7.4         19           2
 W tryptophan          0.8          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAGI family member, X-linked isoform c 
MAGIX                 0.963   MAGI family member, X-linked isoform d 
MAGIX                 0.646   MAGI family member, X-linked isoform a 
MAGIX                 0.623   MAGI family member, X-linked isoform b 
MAGI2                 0.059   membrane associated guanylate kinase, WW and PDZ dom...
PDLIM7                0.051   PDZ and LIM domain 7 isoform 2 
MAGI3                 0.051   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.051   membrane-associated guanylate kinase-related  3 iso...
MAGI1                 0.047   membrane associated guanylate kinase, WW and PDZ dom...
PDLIM2                0.045   PDZ and LIM domain 2 isoform 3 
PDLIM2                0.045   PDZ and LIM domain 2 isoform 1 
PDLIM5                0.045   PDZ and LIM domain 5 isoform a 
PDLIM2                0.045   PDZ and LIM domain 2 isoform 2 
MAST2                 0.039   microtubule associated serine/threonine kinase 2 [H...
MAGI1                 0.039   membrane associated guanylate kinase, WW and PDZ dom...
PDLIM7                0.037   PDZ and LIM domain 7 isoform 1 
MAGI1                 0.035   membrane associated guanylate kinase, WW and PDZ dom...
C2orf55               0.035   hypothetical protein LOC343990 
SYNPO2L               0.035   synaptopodin 2-like isoform a 
SYNPO2L               0.035   synaptopodin 2-like isoform b 
PTPN13                0.035   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.035   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.035   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.035   protein tyrosine phosphatase, non-receptor type 13 is...
SNTB2                 0.033   basic beta 2 syntrophin 
MAST3                 0.033   microtubule associated serine/threonine kinase 3 [H...
DACT3                 0.033   thymus expressed gene 3-like 
SNTA1                 0.031   acidic alpha 1 syntrophin 
PDLIM7                0.031   PDZ and LIM domain 7 isoform 4 
WASL                  0.031   Wiskott-Aldrich syndrome gene-like protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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