Guide to the Human Genome
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Name: DDX5 Sequence: fasta or formatted (614aa) NCBI GI: 4758138
Description:

DEAD (Asp-Glu-Ala-Asp) box polypeptide 5

Referenced in:

DEAD / H Helicase Family
Capping and Splicing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         43           3
 C cysteine            1.5          9           1
 D aspartate           6.2         38           2
 E glutamate           5.7         35           2
 F phenylalanine       3.7         23           2
 G glycine             8.8         54           2
 H histidine           1.8         11           1
 I isoleucine          5.4         33           1
 K lysine              5.5         34           3
 L leucine             6.8         42           2
 M methionine          2.4         15           1
 N asparagine          5.4         33           2
 P proline             5.0         31           1
 Q glutamine           4.9         30           2
 R arginine            8.3         51           2
 S serine              5.4         33           2
 T threonine           5.7         35           2
 V valine              5.4         33           1
 W tryptophan          1.0          6           1
 Y tyrosine            4.1         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
DDX17                 0.635   DEAD box polypeptide 17 isoform 3 
DDX17                 0.631   DEAD box polypeptide 17 isoform 1 
DDX42                 0.274   DEAD box polypeptide 42 protein 
DDX42                 0.274   DEAD box polypeptide 42 protein 
DDX46                 0.272   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
DDX43                 0.258   DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 
DDX53                 0.248   DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 
DDX3Y                 0.246   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.246   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX3X                 0.245   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX4                  0.216   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.216   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX4                  0.216   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
DDX23                 0.211   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
DDX41                 0.200   DEAD-box protein abstrakt 
DDX59                 0.174   DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 
DDX47                 0.154   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...
DDX21                 0.145   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
DDX27                 0.140   DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 
DDX50                 0.140   nucleolar protein GU2 
EIF4A3                0.139   eukaryotic translation initiation factor 4A, isoform ...
EIF4A2                0.138   eukaryotic translation initiation factor 4A2 
EIF4A1                0.136   eukaryotic translation initiation factor 4A isoform 1...
DDX49                 0.135   DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 
DDX54                 0.130   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...
DDX54                 0.130   DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...
DDX47                 0.126   DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...
DDX18                 0.123   DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 
DDX31                 0.122   DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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