Guide to the Human Genome
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Name: PIM2 Sequence: fasta or formatted (311aa) NCBI GI: 42821112
Description:

serine/threonine protein kinase pim-2

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         21           2
 C cysteine            2.6          8           2
 D aspartate           6.1         19           1
 E glutamate           6.1         19           2
 F phenylalanine       3.9         12           2
 G glycine             9.6         30           3
 H histidine           3.2         10           1
 I isoleucine          4.8         15           1
 K lysine              3.2         10           1
 L leucine            12.5         39           2
 M methionine          1.3          4           1
 N asparagine          1.0          3           1
 P proline            11.3         35           3
 Q glutamine           2.9          9           1
 R arginine            6.1         19           2
 S serine              4.8         15           2
 T threonine           3.9         12           1
 V valine              5.8         18           2
 W tryptophan          2.3          7           1
 Y tyrosine            1.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine/threonine protein kinase pim-2 
PIM3                  0.521   serine/threonine protein kinase pim-3 
PIM1                  0.493   non-specific serine/threonine protein kinase 
MARK2                 0.191   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.191   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.191   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.191   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.191   MAP/microtubule affinity-regulating kinase 2 isoform...
BRSK1                 0.191   BR serine/threonine kinase 1 
SIK1                  0.190   SNF1-like kinase 
MARK4                 0.190   MAP/microtubule affinity-regulating kinase 4 
SNRK                  0.185   SNF related kinase 
SNRK                  0.185   SNF related kinase 
MARK1                 0.185   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.182   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.182   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.182   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.182   MAP/microtubule affinity-regulating kinase 3 isoform...
PASK                  0.182   PAS domain containing serine/threonine kinase 
BRSK2                 0.180   BR serine/threonine kinase 2 
SIK2                  0.174   SNF1-like kinase 2 
NUAK2                 0.169   NUAK family, SNF1-like kinase, 2 
MGC42105              0.167   serine/threonine-protein kinase NIM1 
PRKAA1                0.164   protein kinase, AMP-activated, alpha 1 catalytic sub...
HUNK                  0.161   hormonally upregulated Neu-associated kinase 
TSSK3                 0.161   testis-specific serine kinase 3 
MELK                  0.160   maternal embryonic leucine zipper kinase 
NUAK1                 0.156   AMPK-related protein kinase 5 
QSK                   0.156   serine/threonine-protein kinase QSK 
PRKAA2                0.155   AMP-activated protein kinase alpha 2 catalytic subun...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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