Guide to the Human Genome
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Name: ADAMTS12 Sequence: fasta or formatted (1594aa) NCBI GI: 51558724
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 12 preproprotein

Referenced in:

Lung
Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         66           3
 C cysteine            5.5         87           2
 D aspartate           4.1         66           2
 E glutamate           6.3        101           4
 F phenylalanine       2.8         45           2
 G glycine             8.2        130           3
 H histidine           3.2         51           2
 I isoleucine          4.1         65           2
 K lysine              6.0         95           3
 L leucine             7.2        115           2
 M methionine          1.9         30           2
 N asparagine          4.2         67           2
 P proline             7.3        116           3
 Q glutamine           4.8         76           2
 R arginine            5.5         88           2
 S serine              8.5        135           3
 T threonine           6.5        104           3
 V valine              5.2         83           3
 W tryptophan          2.4         38           2
 Y tyrosine            2.3         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mot... 
ADAMTS7               0.377   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.205   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.186   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.182   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.180   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.158   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.154   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.150   a disintegrin-like and metalloprotease with thrombo...
ADAMTS17              0.148   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.136   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS1               0.131   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.128   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS15              0.127   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS14              0.122   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.121   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS8               0.120   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS5               0.110   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.105   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.102   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.102   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.097   ADAM metallopeptidase with thrombospondin type 1 mot...
PAPLN                 0.073   papilin 
ADAMTSL3              0.060   ADAMTS-like 3 precursor 
ADAMTSL1              0.056   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.056   ADAMTS-like 1 isoform 2 precursor 
ADAMTS2               0.052   ADAM metallopeptidase with thrombospondin type 1 mot...
THSD4                 0.051   thrombospondin, type I, domain containing 4 
ADAMTSL2              0.048   ADAMTS-like 2 precursor 
ADAMTSL2              0.048   ADAMTS-like 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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