SPTBN4 1523

Name: SPTBN4	Sequence: fasta or formatted (2564aa)		NCBI GI: 115430237
Description: spectrin, beta, non-erythrocytic 4 isoform sigma1		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [678aa] spectrin, beta, non-erythrocytic 4 isoform sigma5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.1 310 4 C cysteine 0.8 21 1 D aspartate 4.3 109 2 E glutamate 11.6 297 3 F phenylalanine 2.0 52 2 G glycine 6.3 162 4 H histidine 2.8 72 1 I isoleucine 2.1 55 2 K lysine 3.9 101 4 L leucine 12.8 327 3 M methionine 1.7 43 2 N asparagine 2.1 53 3 P proline 3.8 97 5 Q glutamine 7.2 185 3 R arginine 9.4 241 4 S serine 5.3 135 2 T threonine 2.8 72 2 V valine 5.8 149 2 W tryptophan 1.9 49 1 Y tyrosine 1.3 34 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN1 0.429 spectrin, beta, non-erythrocytic 1 isoform 1 SPTBN1 0.425 spectrin, beta, non-erythrocytic 1 isoform 2 SPTB 0.387 spectrin beta isoform a SPTB 0.387 spectrin beta isoform b SPTBN2 0.386 spectrin, beta, non-erythrocytic 2 SPTBN4 0.247 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... SPTBN5 0.169 spectrin, beta, non-erythrocytic 5 SPTAN1 0.081 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.081 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... ACTN4 0.077 actinin, alpha 4 ACTN1 0.076 actinin, alpha 1 isoform c ACTN1 0.076 actinin, alpha 1 isoform a ACTN1 0.076 actinin, alpha 1 isoform b ACTN3 0.075 actinin, alpha 3 ACTN2 0.074 actinin, alpha 2 SPTA1 0.067 spectrin, alpha, erythrocytic 1 PLEC1 0.056 plectin 1 isoform 3 PLEC1 0.056 plectin 1 isoform 1 PLEC1 0.056 plectin 1 isoform 7 PLEC1 0.056 plectin 1 isoform 11 PLEC1 0.056 plectin 1 isoform 10 PLEC1 0.056 plectin 1 isoform 8 PLEC1 0.056 plectin 1 isoform 6 PLEC1 0.056 plectin 1 isoform 2 LOC652460 0.055 PREDICTED: similar to plectin 1, partial DST 0.054 dystonin isoform 4 DST 0.054 dystonin isoform 3 DST 0.054 dystonin isoform 2 DST 0.053 dystonin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.