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Search of human proteins with 149192853
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149192853 family with sequence similarity 89, member B
isoform 3 [Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149192853 family with sequence similarity 89, member B isofor... 313 3e-86
gi|22779873 family with sequence similarity 89, member B isoform... 199 1e-51
gi|149192858 family with sequence similarity 89, member B isofor... 197 2e-51
gi|38348390 family with sequence similarity 89, member A [Homo s... 82 1e-16
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 8e-04
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 39 0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.004
gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens] 36 0.011
gi|66912172 hairy and enhancer of split 3 [Homo sapiens] 35 0.033
gi|226371735 iroquois homeobox 3 [Homo sapiens] 34 0.043
gi|239748977 PREDICTED: hypothetical protein XP_002346843 [Homo ... 34 0.057
gi|19111150 angiomotin isoform 2 [Homo sapiens] 34 0.057
gi|166064029 angiomotin isoform 1 [Homo sapiens] 34 0.057
gi|21359951 RNA binding motif protein 42 [Homo sapiens] 33 0.074
gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo... 33 0.097
gi|66773086 SH3-binding kinase 1 [Homo sapiens] 33 0.097
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 33 0.13
gi|239752278 PREDICTED: hypothetical protein [Homo sapiens] 32 0.16
gi|239746791 PREDICTED: hypothetical protein XP_002343850 [Homo ... 32 0.16
gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] 32 0.16
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 32 0.22
gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens] 32 0.28
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 32 0.28
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 32 0.28
gi|30425446 hypothetical protein LOC255783 [Homo sapiens] 32 0.28
gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo ... 31 0.37
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo ... 31 0.37
>gi|149192853 family with sequence similarity 89, member B isoform 3
[Homo sapiens]
Length = 154
Score = 313 bits (803), Expect = 3e-86
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR
Sbjct: 1 MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
Query: 61 APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRV 120
APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRV
Sbjct: 61 APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRV 120
Query: 121 NPGLQTPVPRPELLPGPVILPPFGQLLPTGCGPV 154
NPGLQTPVPRPELLPGPVILPPFGQLLPTGCGPV
Sbjct: 121 NPGLQTPVPRPELLPGPVILPPFGQLLPTGCGPV 154
>gi|22779873 family with sequence similarity 89, member B isoform
2 [Homo sapiens]
Length = 176
Score = 199 bits (505), Expect = 1e-51
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR
Sbjct: 1 MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
Query: 61 APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEML 98
APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEML
Sbjct: 61 APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEML 98
>gi|149192858 family with sequence similarity 89, member B isoform
1 [Homo sapiens]
Length = 189
Score = 197 bits (502), Expect = 2e-51
Identities = 97/98 (98%), Positives = 98/98 (100%)
Query: 1 MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR
Sbjct: 1 MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
Query: 61 APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEML 98
APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEM+
Sbjct: 61 APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMV 98
>gi|38348390 family with sequence similarity 89, member A [Homo
sapiens]
Length = 184
Score = 82.4 bits (202), Expect = 1e-16
Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 20/101 (19%)
Query: 9 APGGAG------CALAGLPPLPRGLSGLLN-ASGGS----WRELERVYSQRSRIHDELSR 57
APG AG + GLPPLP+ LSGLL+ ASGG WR LER+Y+Q+SRI DELSR
Sbjct: 7 APGAAGNGAVRGLRVDGLPPLPKSLSGLLHSASGGGASGGWRHLERLYAQKSRIQDELSR 66
Query: 58 AARAPDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEML 98
GP G A AA P +P NLD+ALA LRKEM+
Sbjct: 67 G-----GP----GGGGARAAALPAKPPNLDAALALLRKEMV 98
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.0 bits (92), Expect = 8e-04
Identities = 41/138 (29%), Positives = 54/138 (39%), Gaps = 14/138 (10%)
Query: 10 PGGAGCALAGLPPLPRGLSGL---LNASGGSWRELERVYSQRSRIHDELSRAARAPDGPR 66
P G A L P P G +G + A+ E + ++ + AARA GP
Sbjct: 116 PAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG 175
Query: 67 HAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQT 126
G GP GP +P +A + L+ A H PAV V P
Sbjct: 176 PGPGP---GPGPGPGKPAGPGAA------QTLNGSAALLNSHHAAAPAVSLVNNGPAALL 226
Query: 127 PVPRPELLPGPVI-LPPF 143
P+P+P PG VI PPF
Sbjct: 227 PLPKP-AAPGTVIQTPPF 243
Score = 27.7 bits (60), Expect = 4.1
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 17/86 (19%)
Query: 68 AAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQTP 127
AA AA+ A PR P +A AL ++S A A G GP G
Sbjct: 34 AASAAHHHHLA-PRTPEVRAAAAGALGNHVVSGSPAGAAG-------AGPAAPAEGAPGA 85
Query: 128 VPRPELLPGPVILPPFGQLLPTGCGP 153
P P PP G+ P G GP
Sbjct: 86 APEP---------PPAGRARPGGGGP 102
Score = 26.6 bits (57), Expect = 9.1
Identities = 34/116 (29%), Positives = 38/116 (32%), Gaps = 30/116 (25%)
Query: 65 PRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAV------GHVLVVPAVG-- 116
P H AG A PA P + A +AGG A V G PA G
Sbjct: 284 PGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVK 343
Query: 117 ---PVRV----NPGLQT------------PVPRPEL---LPGPVILPPFGQLLPTG 150
P RV P QT V P + LP P +PP PTG
Sbjct: 344 AESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTG 399
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 38.9 bits (89), Expect = 0.002
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 1 MNGLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
+ GLP+ +PGGA A GL P+ ++ + + ++ +++ + L+ AA
Sbjct: 214 LQGLPNG-SPGGATAATLGLAPIQVVGQPVMALNTPT----SQLLAKQVPVSGYLASAA- 267
Query: 61 APDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRV 120
P P A A + AG NL +A+A GGA A P+ P+ V
Sbjct: 268 GPSEPVTLASAGVSPQGAGLVIQKNLSAAVATTLNGNSVFGGAGAASAPTGTPSGQPLAV 327
Query: 121 NPGLQTP--VPRPELL----PGPVILPPFGQLLP 148
PGL + VP P ++ P P+ P G L P
Sbjct: 328 APGLGSSPLVPAPNVILHRTPTPIQPKPAGVLPP 361
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 37.7 bits (86), Expect = 0.004
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 58 AARAPD-GPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVG 116
AA AP PR AA AA A P+ GP +P A R L+A A V P G
Sbjct: 141 AAAAPARAPRAAAAAATAPPSPGPAQP-----GPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Query: 117 PVRVNP----GLQTPVPRPELLPGP 137
P R P + P+P P P P
Sbjct: 196 PRRAPPPAVAAREPPLPPPPQPPAP 220
Score = 33.9 bits (76), Expect = 0.057
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 60 RAPDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVR 119
RAP G AA AA P P P +A A R +A A A P+ GP +
Sbjct: 113 RAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP------PSPGPAQ 166
Query: 120 VNPGLQ--TPVPRPELLPG--PVILPPFG 144
P Q P+ P P P + PP G
Sbjct: 167 PGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
>gi|145309322 insulinoma-associated protein IA-6 [Homo sapiens]
Length = 566
Score = 36.2 bits (82), Expect = 0.011
Identities = 42/155 (27%), Positives = 51/155 (32%), Gaps = 34/155 (21%)
Query: 6 SAEAPGGAGCALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAARAPDGP 65
+A G+ C AG+ P G G WR R GP
Sbjct: 68 AAREQSGSPCRAAGVSP------GTGGREGAEWRA-----------------GGREGPGP 104
Query: 66 RHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVG--HVLVVPAVGPVRVNPG 123
+ + A PA R L+ L++ GGAAAV V PA P PG
Sbjct: 105 SPSPSPSPAKPAGAELRRAFLERCLSSPVSAESFPGGAAAVAAFSCSVAPAAAP---TPG 161
Query: 124 ------LQTPVPRPELLPGPVILPPFGQLLPTGCG 152
L+ P P P L P P L Q L G
Sbjct: 162 EQFLLPLRAPFPEPALQPDPAPLSAALQSLKRAAG 196
>gi|66912172 hairy and enhancer of split 3 [Homo sapiens]
Length = 186
Score = 34.7 bits (78), Expect = 0.033
Identities = 32/117 (27%), Positives = 44/117 (37%), Gaps = 10/117 (8%)
Query: 16 ALAGLPPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAARAPDGPRHAAGAANAG 75
+L GL P+PRG +R SQ R DE+ R P P AAG+
Sbjct: 52 SLQGLWPVPRGAE-----QPSGFRSCLPGVSQLLRRGDEVGSGLRCPLVPESAAGSTMDS 106
Query: 76 PAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQTPVPRPE 132
G P A+ +AGG + +L++P PG VP P+
Sbjct: 107 AGLGQEAPALFRPCTPAVWAPAPAAGGPRSPPPLLLLP-----ESLPGSSASVPPPQ 158
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 34.3 bits (77), Expect = 0.043
Identities = 45/154 (29%), Positives = 55/154 (35%), Gaps = 23/154 (14%)
Query: 4 LPSAEAPGGAGCALAGLPPLPRGLSGLLNASG-GSWRELERVYSQRSRIHDELSRAARAP 62
L A AP A LP P L A S + +++S L+ A +P
Sbjct: 308 LSLAPAPPPVAVASPSLPSPPVSLDPCAPAPAPASALQKPKIWS--------LAETATSP 359
Query: 63 DGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVG--PVRV 120
D PR + A P P SAL LS AAA H LV +G P
Sbjct: 360 DNPRRSPPGAGGSPPGAAVAP----SAL------QLSPAAAAAAAHRLVSAPLGKFPAWT 409
Query: 121 NPGLQTPVPRPELLPGPVI--LPPFGQLLPTGCG 152
N P P P L P ++ PP LP G
Sbjct: 410 NRPFPGPPPGPRLHPLSLLGSAPPHLLGLPGAAG 443
>gi|239748977 PREDICTED: hypothetical protein XP_002346843 [Homo
sapiens]
Length = 106
Score = 33.9 bits (76), Expect = 0.057
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 91 AALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQT-PVPRPELLPGP--VILPPF--GQ 145
++++ ++ GG+ A G + P+ + P L P P PELLP P V+LPP G
Sbjct: 16 SSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGV 75
Query: 146 LLPTGC 151
LLP C
Sbjct: 76 LLPPLC 81
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 33.9 bits (76), Expect = 0.057
Identities = 30/80 (37%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 58 AARAPDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGP 117
AA AP AA AA PAA + P A AA SA AAAV
Sbjct: 514 AAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAP--SAAAAAAV----------- 560
Query: 118 VRVNPGLQTPVPRPELLPGP 137
+V P PVP P L+P P
Sbjct: 561 -QVAPAAPAPVPAPALVPVP 579
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 33.9 bits (76), Expect = 0.057
Identities = 30/80 (37%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 58 AARAPDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGP 117
AA AP AA AA PAA + P A AA SA AAAV
Sbjct: 923 AAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAP--SAAAAAAV----------- 969
Query: 118 VRVNPGLQTPVPRPELLPGP 137
+V P PVP P L+P P
Sbjct: 970 -QVAPAAPAPVPAPALVPVP 988
>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
Length = 480
Score = 33.5 bits (75), Expect = 0.074
Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 19/102 (18%)
Query: 59 ARAPDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAV--- 115
ARAP GP + AA P P P L L KE A AAA G AV
Sbjct: 211 ARAP-GPPLGSMAALRPPLEEPAAPRELGLGLGLGLKEKEEAVVAAAAGLEEASAAVAVG 269
Query: 116 ------GPVRVNPGLQT----PVPRPELLPGPV-----ILPP 142
GP + P L P+P PE LP P+ +LPP
Sbjct: 270 AGGAPAGPAVIGPSLPLALAMPLPEPEPLPLPLEVVRGLLPP 311
>gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo
sapiens]
Length = 173
Score = 33.1 bits (74), Expect = 0.097
Identities = 27/67 (40%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 19 GLPPLPR--GLSGLLNASGGSWRELERVYSQRSRIHDELSRAARAPDG-PRHAAGAANAG 75
G PLPR G SGG+ R R H +RA R P G P HA GAA
Sbjct: 97 GQQPLPRRPGHDDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGR 156
Query: 76 PAAGPRR 82
AAG R
Sbjct: 157 GAAGRAR 163
>gi|66773086 SH3-binding kinase 1 [Homo sapiens]
Length = 424
Score = 33.1 bits (74), Expect = 0.097
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 49 SRIHDELSRAARAPDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKEMLSAGGAAAVGH 108
S + S AR P G R PAAGP R A L++ +L+ G+ G
Sbjct: 319 SELRRRPSHRARKPPGDRP--------PAAGPLRL----EAPGPLKRTVLTESGS---GS 363
Query: 109 VLVVPAVGPVRVNPGLQTPVPRPELLPGPVILP 141
PAVG V + + PVP P +P P + P
Sbjct: 364 RPAPPAVGSVPLPVPVPVPVPVPVPVPEPGLAP 396
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 32.7 bits (73), Expect = 0.13
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 30/159 (18%)
Query: 6 SAEAPGGAGCALAGLPPLPRGLSGLLN--ASGGSWRELERVYSQRSRIHDELSRAARAPD 63
SA GGAG +A P L L+ A GGS + +L ++
Sbjct: 1707 SAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGS-------STPGPPYPPQLMTPSKLRG 1759
Query: 64 GPRHAAGAANAGPAAGPRRPVNLDS-----------ALAALRKEMLSAGGAAAVGHVLVV 112
A+G GP+ G R PV S L ALR A G V V
Sbjct: 1760 RALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVE 1819
Query: 113 PAVGPV----------RVNPGLQTPVPRPELLPGPVILP 141
P V PV ++ P + P P P LPGP+ P
Sbjct: 1820 PEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLAQP 1858
>gi|239752278 PREDICTED: hypothetical protein [Homo sapiens]
Length = 252
Score = 32.3 bits (72), Expect = 0.16
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 3 GLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGG---SWRELERVYSQRSRIHDELSRAA 59
GLP + APG G LP LP LS + + SGG +W + + E
Sbjct: 168 GLPGSRAPGLPGSRFFALPSLPPPLSVVTSRSGGPGAAWLARAPLRAAGEIQVSERVEPQ 227
Query: 60 RAPDGPRHAAGAANAG 75
A PR A G A G
Sbjct: 228 GARGSPRGADGLAKLG 243
>gi|239746791 PREDICTED: hypothetical protein XP_002343850 [Homo
sapiens]
Length = 252
Score = 32.3 bits (72), Expect = 0.16
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 3 GLPSAEAPGGAGCALAGLPPLPRGLSGLLNASGG---SWRELERVYSQRSRIHDELSRAA 59
GLP + APG G LP LP LS + + SGG +W + + E
Sbjct: 168 GLPGSRAPGLPGSRFFALPSLPPPLSVVTSRSGGPGAAWLARAPLRAAGEIQVSERVEPQ 227
Query: 60 RAPDGPRHAAGAANAG 75
A PR A G A G
Sbjct: 228 GARGSPRGADGLAKLG 243
>gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
Length = 671
Score = 32.3 bits (72), Expect = 0.16
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 51 IHDELSRAARAPDGPRHAAGAANAG-PAAGPRRPVNLDSALAALRKEM--------LSAG 101
+ +E RAAR P+ P A AG PA G P D A A +E A
Sbjct: 237 VKEETPRAAREPEEPSQDAPRDPAGEPAGGEEVPAPADRAPARSCREAEGLAHPGDTGAR 296
Query: 102 GAAAVGHVLVVPAVGPVR 119
G A GH P G VR
Sbjct: 297 GEDAAGHRRAEPGPGEVR 314
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 32.0 bits (71), Expect = 0.22
Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 10/132 (7%)
Query: 21 PPLPRGLSGLLNASGGSWRELERVYSQRSRIHDELSRAARAPDGPRHAAGAANAGPAAGP 80
P LP + L + S + VYS + + A P A + + GP
Sbjct: 601 PTLPTSATSLASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGP 660
Query: 81 RRPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQTPVPRPELLPGPVIL 140
P +L S L A ++ + G L V +V P LQ P P + PV L
Sbjct: 661 VLPQSLPS-LGAYQQPTAAPG--------LPVGSVPAPACPPSLQQHFPDPAMSFAPV-L 710
Query: 141 PPFGQLLPTGCG 152
PP +PTG G
Sbjct: 711 PPPSTPMPTGPG 722
>gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens]
Length = 422
Score = 31.6 bits (70), Expect = 0.28
Identities = 44/134 (32%), Positives = 55/134 (41%), Gaps = 28/134 (20%)
Query: 6 SAEAPGGAGCALAGLPPLPRGLSGLLNA--SGGSWRELE---------RVYSQRSRIHDE 54
+A APG A AG P G S ++ S GS +EL +V+ QR R
Sbjct: 42 AALAPGAA----AGNEAAPAGASVCYSSPPSVGSVQELAQRAAVVIEGKVHPQR-RQQGA 96
Query: 55 LSRAARAPDGPRHAAGAANAGPAAGPRRPVNLDSALAALRKE-MLSAGGAAAVGHVLVVP 113
L R A A G A G PAAGPR AL +E +L+A G VP
Sbjct: 97 LDRKAAAAAGEAGAWGGDREPPAAGPR-------ALGPPAEEPLLAANGTVPSWPTAPVP 149
Query: 114 AVGPVRVNPGLQTP 127
+ G PG + P
Sbjct: 150 SAG----EPGEEAP 159
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 31.6 bits (70), Expect = 0.28
Identities = 34/100 (34%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 58 AARAPDGPRHAAGAA--NAGPAAGPRRPVNLDSA-----LAALRKEMLSAGGAAAVGHVL 110
AA P PR AA +A AA PRR +A+ L GA AV
Sbjct: 53 AAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVP--- 109
Query: 111 VVPAVGPVRVNPGLQTPVPRPELLPGP--VILPPFGQLLP 148
P+ GP+ P +P PRP L GP +LPP P
Sbjct: 110 AAPSPGPLPARP--SSPPPRPSLPSGPHRPVLPPSALAAP 147
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 31.6 bits (70), Expect = 0.28
Identities = 34/100 (34%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 58 AARAPDGPRHAAGAA--NAGPAAGPRRPVNLDSA-----LAALRKEMLSAGGAAAVGHVL 110
AA P PR AA +A AA PRR +A+ L GA AV
Sbjct: 53 AAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVP--- 109
Query: 111 VVPAVGPVRVNPGLQTPVPRPELLPGP--VILPPFGQLLP 148
P+ GP+ P +P PRP L GP +LPP P
Sbjct: 110 AAPSPGPLPARP--SSPPPRPSLPSGPHRPVLPPSALAAP 147
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 31.6 bits (70), Expect = 0.28
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 24 PRGLSGLLNASGGSWRELERV-YSQRSRIHDELSRAARAPDGP-RHAAGAANAGPAAGPR 81
P S L N EL++ QR E + AA A G + AAG + GPA GP
Sbjct: 7 PAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGPP 66
Query: 82 RPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQTPVPRPEL 133
+P+ + A GGA + G P + N G PRP L
Sbjct: 67 QPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAG-----PRPAL 113
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 31.6 bits (70), Expect = 0.28
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 24 PRGLSGLLNASGGSWRELERV-YSQRSRIHDELSRAARAPDGP-RHAAGAANAGPAAGPR 81
P S L N EL++ QR E + AA A G + AAG + GPA GP
Sbjct: 7 PAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGPP 66
Query: 82 RPVNLDSALAALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQTPVPRPEL 133
+P+ + A GGA + G P + N G PRP L
Sbjct: 67 QPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAG-----PRPAL 113
>gi|30425446 hypothetical protein LOC255783 [Homo sapiens]
Length = 142
Score = 31.6 bits (70), Expect = 0.28
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 5 PSAEAPGGAGCALAGLPPLP----RGLSGLLNASGGSWRELERVYSQRSRIHDELSRAAR 60
P AP A G+PP+P LS LL GG +L+ S+R R D R +R
Sbjct: 67 PQPSAPSPPCAARPGVPPVPAPAAASLSCLLGVPGGPRPQLQLPLSRRRRYSDPDRRPSR 126
Query: 61 APDGPRHAAGAA 72
PR AA
Sbjct: 127 --QTPRETPEAA 136
>gi|239753786 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 31.2 bits (69), Expect = 0.37
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 46 SQRSRIHDELSRAARAPDGPRHAAGAANAGPAAG---PRRPVNLDSALA 91
S R +L RA ++P PR A G+ PA PR+P N + A A
Sbjct: 115 STRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARA 163
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 31.2 bits (69), Expect = 0.37
Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 6/116 (5%)
Query: 30 LLNASGGSWRELERVYSQRSRIHDELSRAARAPDGPRHAAGAANAGPAAGPRRPVNLDSA 89
LL G R++E++ + + APDG H G+ +G AA RP +A
Sbjct: 232 LLPVQSGQQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAA 291
Query: 90 LAALRKEMLSAGGAAAVGHVLVVPAVGPVRVNPGLQTPVPRPELLPGPVILPPFGQ 145
+ L + G P R P + P P P PG P G+
Sbjct: 292 AS----PDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPP--APGAPARPLRGR 341
>gi|169167301 PREDICTED: hypothetical protein LOC100129786 [Homo
sapiens]
Length = 210
Score = 31.2 bits (69), Expect = 0.37
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 46 SQRSRIHDELSRAARAPDGPRHAAGAANAGPAAG---PRRPVNLDSALA 91
S R +L RA ++P PR A G+ PA PR+P N + A A
Sbjct: 115 STRESQETDLRRARQSPRNPRRARGSPGNRPAQSTREPRKPTNAEHARA 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,206,100
Number of Sequences: 37866
Number of extensions: 453287
Number of successful extensions: 2849
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 2677
Number of HSP's gapped (non-prelim): 349
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.