Guide to the Human Genome
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Name: SBK1 Sequence: fasta or formatted (424aa) NCBI GI: 66773086
Description:

SH3-binding kinase 1

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         33           2
 C cysteine            2.4         10           2
 D aspartate           4.5         19           1
 E glutamate           6.1         26           2
 F phenylalanine       4.7         20           2
 G glycine             9.0         38           1
 H histidine           1.2          5           1
 I isoleucine          2.4         10           2
 K lysine              5.0         21           1
 L leucine             9.7         41           2
 M methionine          1.4          6           1
 N asparagine          1.2          5           1
 P proline            10.8         46           2
 Q glutamine           2.8         12           2
 R arginine            8.5         36           3
 S serine              4.5         19           3
 T threonine           5.7         24           1
 V valine             10.1         43           2
 W tryptophan          0.9          4           1
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-binding kinase 1 
SBK2                  0.223   SH3-binding domain kinase family, member 2 
DCLK3                 0.126   doublecortin-like kinase 3 
MARK3                 0.120   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.120   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.120   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.120   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK1                 0.119   MAP/microtubule affinity-regulating kinase 1 
MARK4                 0.119   MAP/microtubule affinity-regulating kinase 4 
CHEK1                 0.116   checkpoint kinase 1 
CHEK1                 0.116   checkpoint kinase 1 
CHEK1                 0.116   checkpoint kinase 1 
MARK2                 0.114   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.114   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.114   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.114   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.114   MAP/microtubule affinity-regulating kinase 2 isoform...
DCLK2                 0.109   doublecortin-like kinase 2 isoform b 
DCLK2                 0.109   doublecortin-like kinase 2 isoform a 
SIK2                  0.107   SNF1-like kinase 2 
PRKAA2                0.107   AMP-activated protein kinase alpha 2 catalytic subun...
CHEK2                 0.105   protein kinase CHK2 isoform c 
CHEK2                 0.105   protein kinase CHK2 isoform a 
DAPK3                 0.105   death-associated protein kinase 3 
STK32C                0.105   serine/threonine kinase 32C 
RPS6KA1               0.105   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
STK32A                0.105   serine/threonine kinase 32A isoform 1 
NUAK1                 0.103   AMPK-related protein kinase 5 
STK17A                0.103   serine/threonine kinase 17a 
SIK1                  0.103   SNF1-like kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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