Guide to the Human Genome
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Name: KRTAP24-1 Sequence: fasta or formatted (254aa) NCBI GI: 148277102
Description:

keratin associated protein 24-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          5           1
 C cysteine            9.1         23           1
 D aspartate           1.2          3           1
 E glutamate           1.6          4           1
 F phenylalanine       2.8          7           1
 G glycine             5.1         13           1
 H histidine           2.0          5           1
 I isoleucine          2.0          5           1
 K lysine              2.4          6           1
 L leucine             7.9         20           2
 M methionine          0.8          2           1
 N asparagine          5.5         14           1
 P proline             9.8         25           2
 Q glutamine           3.9         10           1
 R arginine            4.3         11           1
 S serine             19.3         49           3
 T threonine           8.7         22           2
 V valine              3.9         10           1
 W tryptophan          0.4          1           1
 Y tyrosine            7.5         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 24-1 
LOC100131696          0.106   PREDICTED: keratin associated protein 
LOC100131696          0.106   PREDICTED: keratin associated protein 
LOC100288060          0.106   PREDICTED: hypothetical protein XP_002343557 
KRTAP26-1             0.099   keratin associated protein 26-1 
KRTAP11-1             0.084   keratin associated protein 11-1 
KRTAP10-8             0.076   keratin associated protein 10-8 
LOC728318             0.070   PREDICTED: hypothetical protein 
LOC728318             0.070   PREDICTED: hypothetical protein 
LOC728318             0.067   PREDICTED: hypothetical protein 
KRTAP10-4             0.067   keratin associated protein 10-4 
KRTAP9-2              0.065   keratin associated protein 9.2 
KRTAP10-9             0.061   keratin associated protein 10-9 
KRTAP4-8              0.057   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.057   PREDICTED: similar to keratin associated protein 4-...
LOC732428             0.057   PREDICTED: keratin-associated protein 9-2-like 2-li...
KRTAP10-6             0.057   keratin associated protein 10-6 
KRTAP4-3              0.055   keratin associated protein 4-3 
KRTAP4-9              0.055   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.055   keratin associated protein 4-9 
KRTAP9-4              0.055   keratin associated protein 9-4 
KRTAP4-9              0.055   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP10-7             0.053   keratin associated protein 10-7 
KRTAP4-11             0.051   keratin associated protein 4-11 
KRTAP13-2             0.051   keratin associated protein 13-2 
KRTAP4-8              0.051   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.051   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-4              0.051   keratin associated protein 4.4 
KRTAP10-1             0.049   keratin associated protein 10-1 
KRTAP4-8              0.048   PREDICTED: keratin associated protein 4-8 isoform 3...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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