Guide to the Human Genome
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Name: LOC732428 Sequence: fasta or formatted (160aa) NCBI GI: 169212028
Description:

PREDICTED: keratin-associated protein 9-2-like 2-like

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.2          2           1
 C cysteine           31.2         50           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine             4.4          7           1
 H histidine           2.5          4           1
 I isoleucine          1.2          2           1
 K lysine              0.0          0           0
 L leucine             1.2          2           1
 M methionine          0.6          1           1
 N asparagine          1.2          2           1
 P proline            10.0         16           1
 Q glutamine           8.1         13           1
 R arginine            3.1          5           2
 S serine             14.4         23           3
 T threonine          13.1         21           2
 V valine              3.8          6           1
 W tryptophan          0.6          1           1
 Y tyrosine            3.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: keratin-associated protein 9-2-like 2-li... 
KRTAP9-2              0.881   keratin associated protein 9.2 
LOC728341             0.822   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-3              0.756   keratin associated protein 9.3 
KRTAP9-4              0.743   keratin associated protein 9-4 
KRTAP9-8              0.737   keratin associated protein 9.8 
LOC728318             0.727   PREDICTED: hypothetical protein 
LOC728318             0.727   PREDICTED: hypothetical protein 
LOC728318             0.727   PREDICTED: hypothetical protein 
KRTAP9-9              0.724   keratin associated protein 9-9 
KRTAP4-12             0.438   keratin associated protein 4-12 
KRTAP4-3              0.430   keratin associated protein 4-3 
KRTAP4-8              0.419   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.419   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.414   keratin associated protein 4-9 
KRTAP4-8              0.414   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.414   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.414   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.406   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.403   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.403   keratin associated protein 4.8 
KRTAP4-8              0.403   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.403   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.401   PREDICTED: keratin associated protein 4-8 
KRTAP4-4              0.393   keratin associated protein 4.4 
KRTAP4-11             0.390   keratin associated protein 4-11 
KRTAP4-5              0.379   keratin associated protein 4-5 
KRTAP4-7              0.363   keratin associated protein 4-7 
KRTAP4-7              0.363   PREDICTED: keratin associated protein 4-7 
KRTAP4-2              0.340   keratin associated protein 4-2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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