Guide to the Human Genome
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Name: KRTAP4-8 Sequence: fasta or formatted (204aa) NCBI GI: 239758034
Description:

PREDICTED: keratin associated protein 4-8 isoform 3

Referenced in:

Keratins

Other entries for this name:
alt prot [185aa] keratin associated protein 4.8
alt prot [185aa] PREDICTED: keratin associated protein 4.8
alt prot [195aa] PREDICTED: keratin associated protein 4-8
alt prot [220aa] PREDICTED: keratin associated protein 4-8 isoform 1
alt prot [193aa] PREDICTED: keratin associated protein 4-8 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           34.8         71           3
 D aspartate           1.0          2           1
 E glutamate           1.0          2           1
 F phenylalanine       0.0          0           0
 G glycine             2.0          4           1
 H histidine           1.0          2           1
 I isoleucine          2.0          4           1
 K lysine              1.5          3           1
 L leucine             1.0          2           1
 M methionine          0.5          1           1
 N asparagine          1.5          3           1
 P proline            10.3         21           1
 Q glutamine           6.4         13           1
 R arginine            6.4         13           1
 S serine             17.6         36           2
 T threonine           5.4         11           2
 V valine              5.9         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: keratin associated protein 4-8 isoform 3... 
LOC100134267          1.000   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.979   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.979   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.921   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.921   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.895   PREDICTED: keratin associated protein 4-8 
KRTAP4-11             0.868   keratin associated protein 4-11 
KRTAP4-9              0.845   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.843   keratin associated protein 4-9 
KRTAP4-8              0.841   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.841   keratin associated protein 4.8 
KRTAP4-9              0.818   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.798   keratin associated protein 4-12 
KRTAP4-5              0.721   keratin associated protein 4-5 
KRTAP4-3              0.607   keratin associated protein 4-3 
KRTAP4-7              0.570   keratin associated protein 4-7 
KRTAP4-7              0.570   PREDICTED: keratin associated protein 4-7 
KRTAP4-4              0.566   keratin associated protein 4.4 
KRTAP4-2              0.459   keratin associated protein 4-2 
LOC728318             0.417   PREDICTED: hypothetical protein 
LOC728318             0.417   PREDICTED: hypothetical protein 
LOC728318             0.415   PREDICTED: hypothetical protein 
LOC728341             0.388   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-2              0.376   keratin associated protein 9.2 
KRTAP10-7             0.374   keratin associated protein 10-7 
KRTAP4-1              0.372   keratin associated protein 4-1 
KRTAP10-11            0.370   keratin associated protein 10-11 
KRTAP9-3              0.366   keratin associated protein 9.3 
LOC100131696          0.364   PREDICTED: keratin associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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