Guide to the Human Genome
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Name: KRTAP26-1 Sequence: fasta or formatted (210aa) NCBI GI: 42822878
Description:

keratin associated protein 26-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.9          4           1
 C cysteine           10.0         21           1
 D aspartate           2.4          5           1
 E glutamate           1.9          4           1
 F phenylalanine       2.9          6           2
 G glycine             6.2         13           1
 H histidine           2.4          5           1
 I isoleucine          1.4          3           1
 K lysine              0.5          1           1
 L leucine            10.0         21           2
 M methionine          0.5          1           1
 N asparagine          3.8          8           1
 P proline            11.0         23           1
 Q glutamine           5.7         12           1
 R arginine            5.2         11           1
 S serine             18.1         38           3
 T threonine           6.7         14           1
 V valine              5.2         11           2
 W tryptophan          0.5          1           1
 Y tyrosine            3.8          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 26-1 
LOC100131696          0.153   PREDICTED: keratin associated protein 
LOC100288060          0.153   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.148   PREDICTED: keratin associated protein 
KRTAP11-1             0.132   keratin associated protein 11-1 
KRTAP4-11             0.123   keratin associated protein 4-11 
KRTAP24-1             0.121   keratin associated protein 24-1 
KRTAP4-3              0.121   keratin associated protein 4-3 
KRTAP4-9              0.118   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP10-12            0.118   keratin associated protein 10-12 
KRTAP12-2             0.116   keratin associated protein 12-2 
KRTAP4-9              0.116   keratin associated protein 4-9 
KRTAP4-8              0.114   PREDICTED: keratin associated protein 4-8 isoform 2...
KRTAP4-8              0.114   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.114   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.114   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-1             0.111   keratin associated protein 10-1 
KRTAP10-8             0.109   keratin associated protein 10-8 
KRTAP4-8              0.109   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.109   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-9             0.109   keratin associated protein 10-9 
KRTAP4-9              0.107   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.107   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.107   keratin associated protein 4.8 
KRTAP4-8              0.102   PREDICTED: keratin associated protein 4-8 
KRTAP10-5             0.102   keratin associated protein 10-5 
KRTAP4-12             0.097   keratin associated protein 4-12 
KRTAP27-1             0.093   keratin associated protein 27-1 
KRTAP10-3             0.090   keratin associated protein 10-3 
KRTAP13-1             0.088   keratin associated protein 13-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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