Guide to the Human Genome
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Name: LOC100134267 Sequence: fasta or formatted (220aa) NCBI GI: 239756794
Description:

PREDICTED: similar to keratin associated protein 4-12 isoform 1

Referenced in:

Keratins

Other entries for this name:
alt prot [193aa] PREDICTED: similar to keratin associated protein 4-12 isoform 2
alt prot [204aa] PREDICTED: similar to keratin associated protein 4-12 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           35.5         78           3
 D aspartate           0.9          2           1
 E glutamate           0.9          2           1
 F phenylalanine       0.0          0           0
 G glycine             1.8          4           1
 H histidine           0.9          2           1
 I isoleucine          1.8          4           1
 K lysine              1.4          3           1
 L leucine             0.9          2           1
 M methionine          0.5          1           1
 N asparagine          1.4          3           1
 P proline            10.0         22           1
 Q glutamine           7.3         16           1
 R arginine            6.4         14           1
 S serine             17.3         38           2
 T threonine           5.0         11           2
 V valine              6.4         14           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to keratin associated protein 4-... 
KRTAP4-8              1.000   PREDICTED: keratin associated protein 4-8 isoform 1...
KRTAP4-8              0.853   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.853   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.792   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.792   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.777   keratin associated protein 4-11 
KRTAP4-8              0.770   PREDICTED: keratin associated protein 4-8 
KRTAP4-9              0.756   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.754   keratin associated protein 4-9 
KRTAP4-9              0.731   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.728   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.728   keratin associated protein 4.8 
KRTAP4-12             0.716   keratin associated protein 4-12 
KRTAP4-5              0.648   keratin associated protein 4-5 
KRTAP4-3              0.587   keratin associated protein 4-3 
KRTAP4-4              0.541   keratin associated protein 4.4 
KRTAP4-7              0.495   keratin associated protein 4-7 
KRTAP4-7              0.495   PREDICTED: keratin associated protein 4-7 
LOC728318             0.396   PREDICTED: hypothetical protein 
LOC728318             0.396   PREDICTED: hypothetical protein 
LOC728318             0.394   PREDICTED: hypothetical protein 
KRTAP4-2              0.394   keratin associated protein 4-2 
KRTAP10-7             0.383   keratin associated protein 10-7 
KRTAP10-11            0.375   keratin associated protein 10-11 
LOC100131696          0.368   PREDICTED: keratin associated protein 
LOC100288060          0.368   PREDICTED: hypothetical protein XP_002343557 
KRTAP10-6             0.368   keratin associated protein 10-6 
KRTAP10-4             0.366   keratin associated protein 10-4 
LOC100131696          0.364   PREDICTED: keratin associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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