PCDH17 37521

Name: PCDH17	Sequence: fasta or formatted (1159aa)		NCBI GI: 94538350
Description: protocadherin 17 precursor		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 79 2 C cysteine 1.9 22 3 D aspartate 7.1 82 2 E glutamate 6.5 75 2 F phenylalanine 2.8 32 1 G glycine 7.4 86 5 H histidine 2.0 23 2 I isoleucine 4.4 51 2 K lysine 4.6 53 4 L leucine 8.7 101 2 M methionine 1.6 19 1 N asparagine 5.5 64 2 P proline 6.7 78 2 Q glutamine 3.8 44 2 R arginine 5.2 60 1 S serine 8.3 96 3 T threonine 6.0 70 2 V valine 7.7 89 2 W tryptophan 0.3 4 1 Y tyrosine 2.7 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 17 precursor PCDH19 0.415 protocadherin 19 isoform a PCDH19 0.413 protocadherin 19 isoform b PCDH10 0.327 protocadherin 10 isoform 1 precursor PCDH10 0.284 protocadherin 10 isoform 2 precursor PCDH18 0.275 protocadherin 18 precursor PCDHAC2 0.226 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.225 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDHGA12 0.212 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.212 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA10 0.210 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.210 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGC4 0.210 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHGC4 0.210 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGA4 0.209 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.209 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA11 0.209 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.209 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA7 0.208 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.208 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGB7 0.206 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.206 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGA6 0.204 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA6 0.204 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGC5 0.202 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDHGC5 0.202 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHA5 0.201 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.201 protocadherin alpha 5 isoform 2 precursor PCDHGB6 0.200 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB6 0.200 protocadherin gamma subfamily B, 6 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.