Name: PCDHGB1 | Sequence: fasta or formatted (810aa) | NCBI GI: 14270490 | |
Description: protocadherin gamma subfamily B, 1 isoform 2 precursor
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Referenced in: Cadherins and Related Proteins
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Other entries for this name:
alt prot [927aa] protocadherin gamma subfamily B, 1 isoform 1 precursor | |||
Composition:
![]() Amino acid Percentage Count Longest homopolymer A alanine 8.3 67 2 C cysteine 1.5 12 1 D aspartate 6.8 55 2 E glutamate 6.0 49 2 F phenylalanine 3.5 28 1 G glycine 5.7 46 2 H histidine 2.1 17 1 I isoleucine 4.4 36 2 K lysine 3.1 25 1 L leucine 11.2 91 3 M methionine 1.4 11 2 N asparagine 5.1 41 2 P proline 6.0 49 2 Q glutamine 3.8 31 2 R arginine 4.8 39 2 S serine 9.9 80 3 T threonine 5.1 41 2 V valine 8.3 67 4 W tryptophan 0.4 3 1 Y tyrosine 2.7 22 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary ![]()
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.991 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGB2 0.691 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB2 0.691 protocadherin gamma subfamily B, 2 isoform 2 precurs... PCDHGB5 0.671 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.671 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB4 0.666 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB4 0.665 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGB6 0.645 protocadherin gamma subfamily B, 6 isoform 2 precurs... PCDHGB6 0.644 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB3 0.639 protocadherin gamma subfamily B, 3 isoform 2 precurs... PCDHGB3 0.638 protocadherin gamma subfamily B, 3 isoform 1 precurs... PCDHGB7 0.632 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.632 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGA5 0.416 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA5 0.416 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA12 0.414 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.414 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA10 0.411 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.411 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA7 0.411 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.411 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA6 0.410 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA6 0.410 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA11 0.409 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.409 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA2 0.406 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA2 0.406 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGA9 0.404 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.404 protocadherin gamma subfamily A, 9 isoform 2 precurs...Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.