PCDHGB1 3974

Name: PCDHGB1	Sequence: fasta or formatted (810aa)		NCBI GI: 14270490
Description: protocadherin gamma subfamily B, 1 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [927aa] protocadherin gamma subfamily B, 1 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 67 2 C cysteine 1.5 12 1 D aspartate 6.8 55 2 E glutamate 6.0 49 2 F phenylalanine 3.5 28 1 G glycine 5.7 46 2 H histidine 2.1 17 1 I isoleucine 4.4 36 2 K lysine 3.1 25 1 L leucine 11.2 91 3 M methionine 1.4 11 2 N asparagine 5.1 41 2 P proline 6.0 49 2 Q glutamine 3.8 31 2 R arginine 4.8 39 2 S serine 9.9 80 3 T threonine 5.1 41 2 V valine 8.3 67 4 W tryptophan 0.4 3 1 Y tyrosine 2.7 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB1 0.991 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGB2 0.691 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB2 0.691 protocadherin gamma subfamily B, 2 isoform 2 precurs... PCDHGB5 0.671 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.671 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB4 0.666 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB4 0.665 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGB6 0.645 protocadherin gamma subfamily B, 6 isoform 2 precurs... PCDHGB6 0.644 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB3 0.639 protocadherin gamma subfamily B, 3 isoform 2 precurs... PCDHGB3 0.638 protocadherin gamma subfamily B, 3 isoform 1 precurs... PCDHGB7 0.632 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.632 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGA5 0.416 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA5 0.416 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA12 0.414 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.414 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA10 0.411 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.411 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA7 0.411 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.411 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA6 0.410 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA6 0.410 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA11 0.409 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.409 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA2 0.406 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA2 0.406 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGA9 0.404 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.404 protocadherin gamma subfamily A, 9 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.