PCDHGA11 3852

Name: PCDHGA11	Sequence: fasta or formatted (837aa)		NCBI GI: 14196451
Description: protocadherin gamma subfamily A, 11 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [935aa] protocadherin gamma subfamily A, 11 isoform 1 precursor alt prot [750aa] protocadherin gamma subfamily A, 11 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 55 2 C cysteine 1.2 10 1 D aspartate 6.3 53 2 E glutamate 6.3 53 2 F phenylalanine 3.5 29 1 G glycine 6.5 54 3 H histidine 1.4 12 1 I isoleucine 5.1 43 2 K lysine 2.7 23 1 L leucine 12.3 103 5 M methionine 1.1 9 1 N asparagine 4.9 41 2 P proline 5.5 46 2 Q glutamine 4.1 34 1 R arginine 5.3 44 2 S serine 9.7 81 2 T threonine 5.4 45 4 V valine 8.7 73 3 W tryptophan 0.6 5 1 Y tyrosine 2.9 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.967 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA11 0.747 protocadherin gamma subfamily A, 11 isoform 3 precur... PCDHGA12 0.697 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.697 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA10 0.684 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.684 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA4 0.673 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA4 0.672 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA3 0.671 protocadherin gamma subfamily A, 3 isoform 2 precurs... PCDHGA5 0.671 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA3 0.671 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA6 0.670 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA5 0.669 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA6 0.668 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA8 0.667 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA8 0.667 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA1 0.665 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA1 0.663 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA7 0.660 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.660 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA9 0.651 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.651 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHGA2 0.641 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGA2 0.641 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGB7 0.414 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.414 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB5 0.409 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.409 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB6 0.407 protocadherin gamma subfamily B, 6 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.