PCDH7 4179

Name: PCDH7	Sequence: fasta or formatted (1069aa)		NCBI GI: 14589931
Description: protocadherin 7 isoform a precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1072aa] protocadherin 7 isoform b precursor alt prot [1200aa] protocadherin 7 isoform c precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 63 3 C cysteine 0.8 9 2 D aspartate 7.7 82 2 E glutamate 5.5 59 2 F phenylalanine 3.0 32 2 G glycine 8.4 90 4 H histidine 1.3 14 1 I isoleucine 5.1 54 2 K lysine 4.9 52 3 L leucine 8.0 85 3 M methionine 1.5 16 1 N asparagine 5.5 59 3 P proline 5.9 63 2 Q glutamine 4.0 43 2 R arginine 5.2 56 2 S serine 8.7 93 3 T threonine 6.3 67 3 V valine 9.2 98 2 W tryptophan 0.4 4 1 Y tyrosine 2.8 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 7 isoform a precursor PCDH7 0.991 protocadherin 7 isoform b precursor PCDH7 0.920 protocadherin 7 isoform c precursor PCDH1 0.450 protocadherin 1 isoform 2 precursor PCDH1 0.449 protocadherin 1 isoform 1 precursor PCDH9 0.320 protocadherin 9 isoform 2 precursor PCDH9 0.320 protocadherin 9 isoform 1 precursor PCDH11Y 0.277 protocadherin 11 Y-linked isoform c PCDH11Y 0.277 protocadherin 11 Y-linked isoform b PCDH11Y 0.277 protocadherin 11 Y-linked isoform a PCDH11X 0.276 protocadherin 11 X-linked isoform a precursor PCDH11X 0.276 protocadherin 11 X-linked isoform d PCDH11X 0.276 protocadherin 11 X-linked isoform c PCDH11X 0.276 protocadherin 11 X-linked isoform b precursor PCDH20 0.181 protocadherin 20 PCDHGB4 0.148 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB4 0.148 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGB7 0.145 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.145 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGC5 0.141 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDHGC5 0.141 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGB6 0.141 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB6 0.141 protocadherin gamma subfamily B, 6 isoform 2 precurs... DCHS1 0.141 dachsous 1 precursor PCDHGB5 0.139 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.139 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHA3 0.138 protocadherin alpha 3 isoform 1 precursor PCDHA3 0.138 protocadherin alpha 3 isoform 2 precursor PCDHB7 0.137 protocadherin beta 7 precursor PCDH10 0.137 protocadherin 10 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.