PCDH10 4174

Name: PCDH10	Sequence: fasta or formatted (1040aa)		NCBI GI: 14589916
Description: protocadherin 10 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [896aa] protocadherin 10 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 74 2 C cysteine 2.3 24 5 D aspartate 6.4 67 2 E glutamate 7.0 73 2 F phenylalanine 3.3 34 1 G glycine 8.4 87 7 H histidine 1.7 18 3 I isoleucine 3.7 38 2 K lysine 2.8 29 3 L leucine 9.0 94 3 M methionine 1.1 11 1 N asparagine 4.6 48 2 P proline 6.3 66 2 Q glutamine 4.8 50 3 R arginine 5.6 58 2 S serine 8.5 88 2 T threonine 5.7 59 1 V valine 8.2 85 2 W tryptophan 0.3 3 1 Y tyrosine 3.3 34 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 10 isoform 1 precursor PCDH10 0.840 protocadherin 10 isoform 2 precursor PCDH17 0.365 protocadherin 17 precursor PCDH19 0.338 protocadherin 19 isoform b PCDH19 0.336 protocadherin 19 isoform a PCDHAC2 0.306 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.303 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDH18 0.303 protocadherin 18 precursor PCDHGC5 0.295 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGC5 0.292 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDHGA12 0.286 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHA5 0.284 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.284 protocadherin alpha 5 isoform 2 precursor PCDHGA12 0.283 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHA7 0.282 protocadherin alpha 7 isoform 2 precursor PCDHA7 0.282 protocadherin alpha 7 isoform 1 precursor PCDHGA10 0.280 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.280 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA6 0.279 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHA8 0.279 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.279 protocadherin alpha 8 isoform 1 precursor PCDHGA4 0.278 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.278 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA1 0.278 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHA4 0.277 protocadherin alpha 4 isoform 2 precursor PCDHA4 0.277 protocadherin alpha 4 isoform 1 precursor PCDHGA6 0.277 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA1 0.277 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA2 0.277 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHA13 0.276 protocadherin alpha 13 isoform 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.