PCDH7 4181

Name: PCDH7	Sequence: fasta or formatted (1200aa)		NCBI GI: 14589935
Description: protocadherin 7 isoform c precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [1069aa] protocadherin 7 isoform a precursor alt prot [1072aa] protocadherin 7 isoform b precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 69 3 C cysteine 1.1 13 2 D aspartate 7.2 87 2 E glutamate 6.1 73 2 F phenylalanine 2.9 35 2 G glycine 8.2 98 4 H histidine 1.2 15 1 I isoleucine 4.4 53 2 K lysine 5.2 62 3 L leucine 7.8 94 3 M methionine 1.5 18 1 N asparagine 5.4 65 3 P proline 6.4 77 2 Q glutamine 3.9 47 2 R arginine 5.1 61 2 S serine 9.4 113 3 T threonine 6.5 78 3 V valine 8.6 103 2 W tryptophan 0.4 5 1 Y tyrosine 2.8 34 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 7 isoform c precursor PCDH7 0.829 protocadherin 7 isoform b precursor PCDH7 0.829 protocadherin 7 isoform a precursor PCDH1 0.451 protocadherin 1 isoform 2 precursor PCDH1 0.371 protocadherin 1 isoform 1 precursor PCDH9 0.289 protocadherin 9 isoform 2 precursor PCDH9 0.284 protocadherin 9 isoform 1 precursor PCDH11Y 0.249 protocadherin 11 Y-linked isoform c PCDH11X 0.245 protocadherin 11 X-linked isoform d PCDH11X 0.243 protocadherin 11 X-linked isoform c PCDH11X 0.237 protocadherin 11 X-linked isoform b precursor PCDH11Y 0.236 protocadherin 11 Y-linked isoform b PCDH11Y 0.236 protocadherin 11 Y-linked isoform a PCDH11X 0.234 protocadherin 11 X-linked isoform a precursor PCDH20 0.145 protocadherin 20 PCDH10 0.120 protocadherin 10 isoform 1 precursor PCDH10 0.120 protocadherin 10 isoform 2 precursor PCDHGB5 0.114 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.114 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGC5 0.111 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDHGC5 0.111 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGB4 0.110 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB4 0.110 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHB7 0.108 protocadherin beta 7 precursor PCDHGB7 0.108 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.108 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB6 0.108 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB6 0.108 protocadherin gamma subfamily B, 6 isoform 2 precurs... PCDHB10 0.107 protocadherin beta 10 precursor PCDHB9 0.106 protocadherin beta 9 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.