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Search of human proteins with 145580626
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145580626 E2F transcription factor 7 [Homo sapiens]
(911 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145580626 E2F transcription factor 7 [Homo sapiens] 1794 0.0
gi|38505226 E2F family member 8 [Homo sapiens] 390 e-108
gi|4758226 E2F transcription factor 2 [Homo sapiens] 58 5e-08
gi|12669915 E2F transcription factor 4 [Homo sapiens] 55 2e-07
gi|4503433 E2F transcription factor 3 [Homo sapiens] 54 5e-07
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] 54 5e-07
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] 54 5e-07
gi|109637795 E2F transcription factor 6 [Homo sapiens] 54 5e-07
gi|12669911 E2F transcription factor 1 [Homo sapiens] 50 7e-06
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 48 4e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 5e-05
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 47 1e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 46 1e-04
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 46 2e-04
gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo ... 45 4e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 5e-04
gi|119943102 CREB binding protein isoform b [Homo sapiens] 44 7e-04
gi|119943104 CREB binding protein isoform a [Homo sapiens] 44 7e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 43 0.002
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 0.003
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi... 42 0.003
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 42 0.003
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 42 0.003
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 42 0.003
gi|33946327 nucleoporin 214kDa [Homo sapiens] 40 0.008
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 40 0.008
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 40 0.008
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 40 0.008
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 40 0.008
gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] 40 0.010
>gi|145580626 E2F transcription factor 7 [Homo sapiens]
Length = 911
Score = 1794 bits (4646), Expect = 0.0
Identities = 911/911 (100%), Positives = 911/911 (100%)
Query: 1 MEVNCLTLKDLISPRQPRLDFAVEDGENAQKENIFVDRSRMAPKTPIKNEPIDLSKQKKF 60
MEVNCLTLKDLISPRQPRLDFAVEDGENAQKENIFVDRSRMAPKTPIKNEPIDLSKQKKF
Sbjct: 1 MEVNCLTLKDLISPRQPRLDFAVEDGENAQKENIFVDRSRMAPKTPIKNEPIDLSKQKKF 60
Query: 61 TPERNPITPVKFVDRQQAEPWTPTANLKMLISAASPDIRDREKKKGLFRPIENKDDAFTD 120
TPERNPITPVKFVDRQQAEPWTPTANLKMLISAASPDIRDREKKKGLFRPIENKDDAFTD
Sbjct: 61 TPERNPITPVKFVDRQQAEPWTPTANLKMLISAASPDIRDREKKKGLFRPIENKDDAFTD 120
Query: 121 SLQLDVVGDSAVDEFEKQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLG 180
SLQLDVVGDSAVDEFEKQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLG
Sbjct: 121 SLQLDVVGDSAVDEFEKQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLG 180
Query: 181 VERRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQ 240
VERRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQ
Sbjct: 181 VERRRIYDIVNVLESLHLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQ 240
Query: 241 KELDLIDYKFGERKKDGDPDSQEQQLLDFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLV 300
KELDLIDYKFGERKKDGDPDSQEQQLLDFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLV
Sbjct: 241 KELDLIDYKFGERKKDGDPDSQEQQLLDFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLV 300
Query: 301 SKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRK 360
SKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRK
Sbjct: 301 SKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRK 360
Query: 361 PAFKWIGPVDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQKLARHGSFNTVQASERI 420
PAFKWIGPVDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQKLARHGSFNTVQASERI
Sbjct: 361 PAFKWIGPVDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQKLARHGSFNTVQASERI 420
Query: 421 QRKVNSEPSSPYREEQGSGGYSLEIGSLAAVYRQKIEDNSQGKAFASKRVVPPSSSLDPV 480
QRKVNSEPSSPYREEQGSGGYSLEIGSLAAVYRQKIEDNSQGKAFASKRVVPPSSSLDPV
Sbjct: 421 QRKVNSEPSSPYREEQGSGGYSLEIGSLAAVYRQKIEDNSQGKAFASKRVVPPSSSLDPV 480
Query: 481 APFPVLSVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLASAASAVESLKPAL 540
APFPVLSVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLASAASAVESLKPAL
Sbjct: 481 APFPVLSVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLASAASAVESLKPAL 540
Query: 541 LAGQPLVYVPSASLFMLYGSLQEGPASGSGSERDDRSSEAPATVELSSAPSAQKRLCEER 600
LAGQPLVYVPSASLFMLYGSLQEGPASGSGSERDDRSSEAPATVELSSAPSAQKRLCEER
Sbjct: 541 LAGQPLVYVPSASLFMLYGSLQEGPASGSGSERDDRSSEAPATVELSSAPSAQKRLCEER 600
Query: 601 KPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLP 660
KPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLP
Sbjct: 601 KPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLP 660
Query: 661 AAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNV 720
AAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNV
Sbjct: 661 AAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNV 720
Query: 721 LLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGP 780
LLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGP
Sbjct: 721 LLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGP 780
Query: 781 VNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPES 840
VNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPES
Sbjct: 781 VNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPES 840
Query: 841 PVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQ 900
PVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQ
Sbjct: 841 PVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQ 900
Query: 901 RRLEIPSGGAD 911
RRLEIPSGGAD
Sbjct: 901 RRLEIPSGGAD 911
>gi|38505226 E2F family member 8 [Homo sapiens]
Length = 867
Score = 390 bits (1002), Expect = e-108
Identities = 338/947 (35%), Positives = 458/947 (48%), Gaps = 160/947 (16%)
Query: 30 QKENIFVD-RSRMAPKTPIKNEPIDLSKQKKFTPERNPIT-PVKFVDRQQAEPWTPTANL 87
+KEN+F + R KTP+K + P+ P+T P K + Q EPWTPTANL
Sbjct: 4 EKENLFCEPHKRGLMKTPLKESTTANIVLAEIQPDFGPLTTPTKPKEGSQGEPWTPTANL 63
Query: 88 KMLISAASPDIRDREKKKGLFRPIENKDDAFTDSLQLDVVGDSAVDEFEKQRPSRKQKSL 147
KMLISA SP+IR+R++K+GLF +A D + + GD EFEK +PSRK+KSL
Sbjct: 64 KMLISAVSPEIRNRDQKRGLFDNRSGLPEA-KDCIHEHLSGD----EFEKSQPSRKEKSL 118
Query: 148 GLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESLHLVSRVAKNQY 207
GLLC KFLARYP+YP I LDEVA L VERRRIYDIVNVLESLH+VSR+AKN+Y
Sbjct: 119 GLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHMVSRLAKNRY 178
Query: 208 GWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQKELD-----LIDYKFGE---RKKDGDP 259
WHGRH+L KTL L+ +GEE KY EQ+ +++KE + + Y + + G
Sbjct: 179 TWHGRHNLNKTLGTLKSIGEENKYAEQIMMIKKKEYEQEFDFIKSYSIEDHIIKSNTGPN 238
Query: 260 DSQEQQLLDFSEPDCPSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILI-EE 318
+ ++ + ++S NSRKDKSLR+MSQKFVMLFLVS +IV+L+VAAKILI E+
Sbjct: 239 GHPDMCFVELPGVEFRAASVNSRKDKSLRVMSQKFVMLFLVSTPQIVSLEVAAKILIGED 298
Query: 319 SQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWIGP---------- 368
+ D SKFKTK+RRLYDIANVL+SL LIKKVHVTEERGRKPAFKW GP
Sbjct: 299 HVEDLDKSKFKTKIRRLYDIANVLSSLDLIKKVHVTEERGRKPAFKWTGPEISPNTSGSS 358
Query: 369 --VDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQKLARHGS-FNTVQASERIQRKVN 425
+ F+ SD E+ S + T G K RH S V++ E +RK+N
Sbjct: 359 PVIHFTPSDLEVRRSSKENCAKNLFSTRG------KPNFTRHPSLIKLVKSIESDRRKIN 412
Query: 426 SEPSSPYR-----EEQGSGGYSLEIGSLAAVYRQKIEDNSQGKAFASKRVVPPSSSLDPV 480
S PSSP + Q S + ++ LAA+ + ++E+ S K + S PV
Sbjct: 413 SAPSSPIKTNKAESSQNSAPFPSKMAQLAAICKMQLEEQSSESRQKVKVQLARSGPCKPV 472
Query: 481 APF-PVLSVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLASAASAVESLKPA 539
AP P ++ + E L P+ G V + + +SAV + P
Sbjct: 473 APLDPPVNAEMELTAPSLIQPL------------------GMVPLIPSPLSSAVPLILPQ 514
Query: 540 LLAG-------QPL----VYVPSASLFMLYGSLQEGPASGSGSERD--------DRSSEA 580
+G QP P L + A+GS D D S +
Sbjct: 515 APSGPSYAIYLQPTQAHQSVTPPQGLSPTVCTTHSSKATGSKDSTDATTEKAANDTSKAS 574
Query: 581 PATVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDLASPK 640
+T S P+ +++ + R + E +KR S + G S K+ + S
Sbjct: 575 ASTRPGSLLPAPERQGAKSRTREPAGERGSKRASMLEDSG--SKKKFKEDLKGLENVSAT 632
Query: 641 TMGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENESTKE 700
+ IPL G A S++S KEN S
Sbjct: 633 LFPSGYLIPLTQCSSLG-------------AESILS---------------GKENSSALS 664
Query: 701 PSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFSV-PCMVLPSP------PL 753
P+ Y SP + G + S T + PSF V P ++ SP P+
Sbjct: 665 PNHRIY---SSP--IAGVIPVTSSELT-------AVNFPSFHVTPLKLMVSPTSVAAVPV 712
Query: 754 GPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIA---QLLVGPTAVVNPKSSTLP 810
G P L S + P P+ + P++ VNF+L LG I+ QL P + + P S +
Sbjct: 713 GNSPALAS-SHPVPIQN-----PSSAIVNFTLQHLGLISPNVQLSASPGSGIVPVSPRIE 766
Query: 811 SAD--PQ----LQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLHQSPVPVTPKS 864
S + P+ Q + + SPV +S QP G V+V Q PVPVTPK
Sbjct: 767 SVNVAPENAGTQQGRATNYDSPVPGQS-----QPN-----GQSVAVTGA-QQPVPVTPKG 815
Query: 865 IQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSS------AQRRLEI 905
Q E+FF+TPG P + N +S QR+LE+
Sbjct: 816 SQLV-AESFFRTPGGPTKPTSSSCMDFEGANKTSLGTLFVPQRKLEV 861
>gi|4758226 E2F transcription factor 2 [Homo sapiens]
Length = 437
Score = 57.8 bits (138), Expect = 5e-08
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 141 SRKQKSLGLLCQKFLARYPSYPLS-TEKTTISLDEVAVSLGVERRRIYDIVNVLESLHLV 199
+R SLGLL +KF+ Y LS +E + L+ A L V++RRIYDI NVLE + L+
Sbjct: 128 TRYDTSLGLLTKKFI-----YLLSESEDGVLDLNWAAEVLDVQKRRIYDITNVLEGIQLI 182
Query: 200 SRVAKNQYGWHGRHSLPKTLR--NLQRLGEEQK 230
+ AKN W GR R Q+LG+E K
Sbjct: 183 RKKAKNNIQWVGRGMFEDPTRPGKQQQLGQELK 215
Score = 40.4 bits (93), Expect = 0.008
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 21/97 (21%)
Query: 272 PDCPSSSAN-SRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKT 330
P P S +R D SL ++++KF+ L S+ ++ L+ AA++L
Sbjct: 118 PKTPKSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVL-------------DV 164
Query: 331 KVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWIG 367
+ RR+YDI NVL + LI+K K +W+G
Sbjct: 165 QKRRIYDITNVLEGIQLIRK-------KAKNNIQWVG 194
>gi|12669915 E2F transcription factor 4 [Homo sapiens]
Length = 413
Score = 55.5 bits (132), Expect = 2e-07
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 140 PSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESLHLV 199
PSR +KSLGLL KF++ ++ D +AV ++RRIYDI NVLE + L+
Sbjct: 15 PSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVR---QKRRIYDITNVLEGIGLI 71
Query: 200 SRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQKELDLIDYK 249
+ +KN W G T +L E + ++ LQQ+E +L +K
Sbjct: 72 EKKSKNSIQWKGVGPGCNTREIADKLIE---LKAEIEELQQREQELDQHK 118
Score = 42.0 bits (97), Expect = 0.003
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 22/121 (18%)
Query: 275 PSSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRR 334
P SR +KSL +++ KFV L +K ++ L +AA L + RR
Sbjct: 10 PPPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQK------------RR 57
Query: 335 LYDIANVLTSLALIKKVHVTEERGRKPAFKW--IGP-VDFSSSDEELVDVSASVLPELKR 391
+YDI NVL + LI E+ K + +W +GP + ++L+++ A + +R
Sbjct: 58 IYDITNVLEGIGLI-------EKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQR 110
Query: 392 E 392
E
Sbjct: 111 E 111
>gi|4503433 E2F transcription factor 3 [Homo sapiens]
Length = 465
Score = 54.3 bits (129), Expect = 5e-07
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 141 SRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESLHLVS 200
+R SLGLL +KF+ P + L++ A L V++RRIYDI NVLE +HL+
Sbjct: 177 TRYDTSLGLLTKKFIQLLSQSP----DGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIK 232
Query: 201 RVAKNQYGWHG 211
+ +KN W G
Sbjct: 233 KKSKNNVQWMG 243
Score = 45.8 bits (107), Expect = 2e-04
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
Query: 272 PDCP----SSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSK 327
PD P S S +R D SL ++++KF+ L S ++ L+ AA++L
Sbjct: 164 PDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVL------------ 211
Query: 328 FKTKVRRLYDIANVLTSLALIKK 350
K + RR+YDI NVL + LIKK
Sbjct: 212 -KVQKRRIYDITNVLEGIHLIKK 233
>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
Length = 345
Score = 54.3 bits (129), Expect = 5e-07
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 141 SRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGV-ERRRIYDIVNVLESLHLV 199
SR +KSLGLL KF+ S + + L A +L V ++RRIYDI NVLE + L+
Sbjct: 49 SRHEKSLGLLTTKFV----SLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLI 104
Query: 200 SRVAKNQYGWHGRHSLPKTLRNLQRLG-----------EEQKYEEQMAYLQQKELDLIDY 248
+ +KN W G + T + RL +E++ ++Q +LQQ +++D
Sbjct: 105 EKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDD 164
Query: 249 KFGER 253
R
Sbjct: 165 SINNR 169
Score = 41.2 bits (95), Expect = 0.004
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 29/134 (21%)
Query: 251 GERKKDGDPDSQEQQLLDFSEPDCP----SSSANSRKDKSLRIMSQKFVMLFLVSKTKIV 306
G+R P +Q Q P P + +SR +KSL +++ KFV L +K ++
Sbjct: 20 GQRPPPQPPQAQAPQ-----PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVL 74
Query: 307 TLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWI 366
L AA L + RR+YDI NVL + LI E+ K + +W
Sbjct: 75 DLKAAADTLAVRQK------------RRIYDITNVLEGIDLI-------EKKSKNSIQWK 115
Query: 367 GPVDFSSSDEELVD 380
G V + +E++D
Sbjct: 116 G-VGAGCNTKEVID 128
>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
Length = 346
Score = 54.3 bits (129), Expect = 5e-07
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 141 SRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGV-ERRRIYDIVNVLESLHLV 199
SR +KSLGLL KF+ S + + L A +L V ++RRIYDI NVLE + L+
Sbjct: 49 SRHEKSLGLLTTKFV----SLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLI 104
Query: 200 SRVAKNQYGWHGRHSLPKTLRNLQRLG-----------EEQKYEEQMAYLQQKELDLIDY 248
+ +KN W G + T + RL +E++ ++Q +LQQ +++D
Sbjct: 105 EKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDD 164
Query: 249 KFGER 253
R
Sbjct: 165 SINNR 169
Score = 41.2 bits (95), Expect = 0.004
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 29/134 (21%)
Query: 251 GERKKDGDPDSQEQQLLDFSEPDCP----SSSANSRKDKSLRIMSQKFVMLFLVSKTKIV 306
G+R P +Q Q P P + +SR +KSL +++ KFV L +K ++
Sbjct: 20 GQRPPPQPPQAQAPQ-----PPPPPQLGGAGGGSSRHEKSLGLLTTKFVSLLQEAKDGVL 74
Query: 307 TLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANVLTSLALIKKVHVTEERGRKPAFKWI 366
L AA L + RR+YDI NVL + LI E+ K + +W
Sbjct: 75 DLKAAADTLAVRQK------------RRIYDITNVLEGIDLI-------EKKSKNSIQWK 115
Query: 367 GPVDFSSSDEELVD 380
G V + +E++D
Sbjct: 116 G-VGAGCNTKEVID 128
>gi|109637795 E2F transcription factor 6 [Homo sapiens]
Length = 281
Score = 54.3 bits (129), Expect = 5e-07
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 137 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 196
K + R SL L +KF+ S P + L++VA LGV +RR+YDI NVL+ +
Sbjct: 58 KVKRPRFDVSLVYLTRKFMDLVRSAPGGI----LDLNKVATKLGVRKRRVYDITNVLDGI 113
Query: 197 HLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQKELDLID 247
LV + +KN W G L N + +++K +E+++ L E D +D
Sbjct: 114 DLVEKKSKNHIRWIG-----SDLSNFGAVPQQKKLQEELSDLSAME-DALD 158
Score = 33.5 bits (75), Expect = 0.93
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 32/151 (21%)
Query: 282 RKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANV 341
R D SL +++KF+ L + I+ L+ A +K + RR+YDI NV
Sbjct: 63 RFDVSLVYLTRKFMDLVRSAPGGILDLNKVA-------------TKLGVRKRRVYDITNV 109
Query: 342 LTSLALIKKVHVTEERGRKPAFKWIGPVDFSS---------SDEELVDVSA--SVLPELK 390
L + L+ E+ K +WIG D S+ EEL D+SA L EL
Sbjct: 110 LDGIDLV-------EKKSKNHIRWIGS-DLSNFGAVPQQKKLQEELSDLSAMEDALDELI 161
Query: 391 RETYGQIQVCAKQKLARHGSFNTVQASERIQ 421
++ Q+ K ++ T Q IQ
Sbjct: 162 KDCAQQLFELTDDKENERLAYVTYQDIHSIQ 192
>gi|12669911 E2F transcription factor 1 [Homo sapiens]
Length = 437
Score = 50.4 bits (119), Expect = 7e-06
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 141 SRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESLHLVS 200
SR + SL L ++FL + + L+ A L V++RRIYDI NVLE + L++
Sbjct: 126 SRYETSLNLTTKRFLELLSH----SADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIA 181
Query: 201 RVAKNQYGWHGRHSLPKTLRNLQRLGEE----QKYEEQMAYL 238
+ +KN W G H+ L+ L ++ Q+ E+Q+ +L
Sbjct: 182 KKSKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHL 223
Score = 37.7 bits (86), Expect = 0.049
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 276 SSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRL 335
S SR + SL + +++F+ L S +V L+ AA++L K + RR+
Sbjct: 121 SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVL-------------KVQKRRI 167
Query: 336 YDIANVLTSLALIKK 350
YDI NVL + LI K
Sbjct: 168 YDITNVLEGIQLIAK 182
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 48.1 bits (113), Expect = 4e-05
Identities = 94/424 (22%), Positives = 156/424 (36%), Gaps = 66/424 (15%)
Query: 513 SMQNGLNGQVD---VSLASAASAVESLKPALLAGQPLVYVPSASLFMLYGSLQEGPASGS 569
S++ GLN Q ++ S +S++ SL A +G +PS+S + S
Sbjct: 106 SLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYASG-----IPSSSRNAITSSYSSTRGISQ 160
Query: 570 GSERDDRSSE---APATVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVM 626
+R+ SS +PA+ + K++ EE RE + +
Sbjct: 161 LWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADRESQGEKAADTT 220
Query: 627 PKKPSDSTDLASPKTMGNR-ASIPLKDIHVNGQ--LPAAEEISGKATANSL-----VSSE 678
P+K +S ++P + G R + L Q LP ++ TA L S +
Sbjct: 221 PRKKQNSNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQ 280
Query: 679 WGNPSRNTDVEKPSK---ENESTKEPSLLQYLCVQSPA---------GLNGFNVLLSGSQ 726
W N + + S E +PS L +PA N L Q
Sbjct: 281 WFNQALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNPLLESLKKMQ 340
Query: 727 TPPTVGP---SSGQLPSFSVPCMVLPS--PPL-----GPFPVLYSPAMPG-PVSSTLGAL 775
TPP++ P S+G + ++ PS PPL GP +L SP+ P ++ LG +
Sbjct: 341 TPPSLPPCPESAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSKPPTTLLGLI 400
Query: 776 PNTGPVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQ-------LQSQPSLNLSPVM 828
P V P + A + P++++ PS P+ + PS +P
Sbjct: 401 PAPSMV----PATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAA 456
Query: 829 SRSHSVVQ---------QPESPVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGS 879
S + + + + E P G V+ S +P T + T + F S
Sbjct: 457 SSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVF----SS 512
Query: 880 LGDP 883
+G P
Sbjct: 513 MGPP 516
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 47.8 bits (112), Expect = 5e-05
Identities = 89/364 (24%), Positives = 124/364 (34%), Gaps = 62/364 (17%)
Query: 551 SASLFMLYGSLQEGPASG--SGSERDDRSSEAPATVELSSAPSAQKRLCEERKPQEEDEP 608
SA + G E P S R D S P T + A ++ E P+ P
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPR----P 192
Query: 609 ATKRQSREYEDGPLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLPAAEEISGK 668
A + R +GP V +T+ + A L Q PA+ +S
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGL-------QRPASRSLSSS 245
Query: 669 ATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTP 728
AT L S PS P+ ++ + G L TP
Sbjct: 246 ATP--LSSPARSGPSARGTPRAPAHPSQPKPK----------------GLQALRPPQVTP 287
Query: 729 PTVGPSSGQLPSFSVPCMVLPSPP---LGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSL 785
P + P S P + PSP P P + A P P + LP + P+ L
Sbjct: 288 PRKDAAPALGPLSSSP-LATPSPSGTKARPVPPPDNAATPLPAT-----LPPSPPLATPL 341
Query: 786 PGLGSIAQLLVGPTAVVNPKSSTLPS--ADPQLQSQPSLNLSPVMSRSHSVVQQPESPVY 843
P L P+ P TLPS A P Q+ PS+ +P M S+ P P+
Sbjct: 342 P--------LAPPSPSAPPSLQTLPSPPATPPSQAPPSMT-TPPMQAPPSLQTIP--PIQ 390
Query: 844 VGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQRRL 903
V H ++ L P P+ S+Q T SLG P L+ + + Q L
Sbjct: 391 VPHSLTSPSLQAPPSPLALSSLQAT---------TSLGSPTLQATHSFLTMSPRQTQASL 441
Query: 904 EIPS 907
PS
Sbjct: 442 TSPS 445
Score = 45.8 bits (107), Expect = 2e-04
Identities = 84/340 (24%), Positives = 117/340 (34%), Gaps = 39/340 (11%)
Query: 564 GPASGSGSERDDRSSEAPAT-VELSS-APSAQKRLCEE--------RKPQEEDEPATKRQ 613
GP G+ S R S A T V L APSA+ R E EP+ +
Sbjct: 166 GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAAR 225
Query: 614 SREYEDGPLSLVMPKKPSDS-TDLASPKTMGNRA-SIPLKDIHVNGQLPAAEEI------ 665
R G L + S S T L+SP G A P H + P +
Sbjct: 226 RRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV 285
Query: 666 -----SGKATANSLVSSEWGNPSRNTDVEKP--SKENESTKEPSLLQY---------LCV 709
L SS PS + +P +N +T P+ L L
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAP 345
Query: 710 QSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVS 769
SP+ L S TPP+ P S P P + PP+ L SP++ P S
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPS 405
Query: 770 ----STLGALPNTG-PVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNL 824
S+L A + G P + +++ + + ++ P P LQ+ SL
Sbjct: 406 PLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPA 465
Query: 825 SPVMSRSHSVVQQPESPVYVGHPVSVVKLHQSPVPVTPKS 864
SP + S S P S HP+ + S P P S
Sbjct: 466 SPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLS 505
Score = 41.6 bits (96), Expect = 0.003
Identities = 79/352 (22%), Positives = 121/352 (34%), Gaps = 30/352 (8%)
Query: 496 PLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLASAASAVESLKPALLAGQPLVYVPSASLF 555
PL+ P QT L + L+ + + A S++ S P ++
Sbjct: 460 PLSLPASPPLQTSLSP--AVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSS 517
Query: 556 MLYGSLQEGPASGSGSERDDRSSEAPATVELSSAPSAQKRLCEERKPQEEDEPATKRQSR 615
+ SLQ PAS + ++ S AP ++ +SAP P E P
Sbjct: 518 LAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTT--------PHLETPPCPAPCPL 569
Query: 616 EYEDGPLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLV 675
+ PL+ P+ PS S P+ AS PL+ + P A +A +
Sbjct: 570 QAPPSPLTTPPPETPS-SIATPPPQAPPALASPPLQGLPSPPLSPLATP-PPQAPPXLAL 627
Query: 676 SSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVL-----------LSG 724
PS S + P+ L +Q+P + +S
Sbjct: 628 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 687
Query: 725 SQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPF---PVLYSPAMPGPVSSTLGALPNTGPV 781
S TPP+ P S P VP SPP+ P P P + P + P + P+
Sbjct: 688 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPM 747
Query: 782 NFSLPGLGSIAQLLVGPTAVVNPKSST----LPSADPQLQSQPSLNLSPVMS 829
+ S + LL P V P P A P Q+ P+L P+ +
Sbjct: 748 SPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQA 799
Score = 39.3 bits (90), Expect = 0.017
Identities = 107/419 (25%), Positives = 144/419 (34%), Gaps = 48/419 (11%)
Query: 470 VVPPSSSLDPVAPFPVLSVDPEYCVNPLAHPVFSVAQTDLQAF-SMQNGLNGQVDVSLAS 528
+ PPS P AP P L P P + S+ +QA S+Q QV SL S
Sbjct: 343 LAPPS----PSAP-PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTS 397
Query: 529 AAS-------AVESLKPALLAGQPLVYVPSASLFMLYGSLQEG---PASGSGSERDDRSS 578
+ A+ SL+ G P + + L M Q P+ + + D
Sbjct: 398 PSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPL 457
Query: 579 EAPATVELSSAPSAQKRLCEERKPQEEDEP-----ATKRQSREYEDGPLS-LVMPKKPSD 632
+AP + L ++P Q L P A + PLS L+MP +
Sbjct: 458 QAP--LSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQ 515
Query: 633 STDLASPKTMGNRASIPLKDIHVNGQL--PAAEEISGKATANSLVSSEW-------GNPS 683
S+ LA P AS+ + L P + S T L + PS
Sbjct: 516 SS-LAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPS 574
Query: 684 RNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFSV 743
T + + +T P L GL + LS TPP P LP
Sbjct: 575 PLTTPPPETPSSIATPPPQAPPALASPPLQGLP--SPPLSPLATPPPQAPPXLALPPLQA 632
Query: 744 PCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAVVN 803
P SPPL P SP P ++ L P FS P + Q P A +
Sbjct: 633 PPSPPASPPLSPLATP-SPQAPNALAVHLLQAP------FSPPPSPPV-QAPFSPPA--S 682
Query: 804 PKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLHQSPVPVTP 862
P S PSA P Q+ PSL P+ P SP P + L P+ V P
Sbjct: 683 PPVS--PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Score = 37.0 bits (84), Expect = 0.084
Identities = 46/150 (30%), Positives = 59/150 (39%), Gaps = 18/150 (12%)
Query: 722 LSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPV 781
+S S TPP P P VP S P+ P A P + L ALP+ P
Sbjct: 747 MSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSP-PA 805
Query: 782 NFSLPG---LGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQP 838
+F PG A L + P A P++ + +A P LQ PS SP + Q P
Sbjct: 806 SF--PGQAPFSPSASLPMSPLATPPPQAPPVLAA-PLLQVPPSPPASPTL-------QAP 855
Query: 839 ESPVYVGHPVSV----VKLHQSPVPVTPKS 864
P G SV + L +P P P S
Sbjct: 856 RRPPTPGPDTSVSGPRLTLALAPGPPPPPS 885
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 46.6 bits (109), Expect = 1e-04
Identities = 94/424 (22%), Positives = 156/424 (36%), Gaps = 66/424 (15%)
Query: 513 SMQNGLNGQVD---VSLASAASAVESLKPALLAGQPLVYVPSASLFMLYGSLQEGPASGS 569
S++ GLN Q ++ S +S++ SL A +G +PS+S + S
Sbjct: 106 SLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYTSG-----IPSSSRNAITSSYSSTRGISQ 160
Query: 570 GSERDDRSSE---APATVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVM 626
+R+ SS +PA+ + K++ EE +E + +
Sbjct: 161 LWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADKESQGEKAADTT 220
Query: 627 PKKPSDSTDLASPKTMGNR-ASIPLKDIHVNGQ--LPAAEEISGKATANSL-----VSSE 678
P+K +S ++P + G R + L Q LP ++ TA L S +
Sbjct: 221 PRKKQNSNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQ 280
Query: 679 WGNPSRNTDVEKPSK---ENESTKEPSL---LQYLCVQSP------AGLNGFNVLLSGSQ 726
W N + + S E T +PS L SP N L Q
Sbjct: 281 WFNQALEDKSDAASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNPLLESLKKMQ 340
Query: 727 TPPTVGP---SSGQLPSFSVPCMVLPS--PPL-----GPFPVLYSPAMPG-PVSSTLGAL 775
TPP++ P S+G + ++ PS PPL GP +L SP+ P ++ LG +
Sbjct: 341 TPPSLPPCPESAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSKPPTTLLGLI 400
Query: 776 PNTGPVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQ-------LQSQPSLNLSPVM 828
P V P + A + P++++ PS P+ + PS +P
Sbjct: 401 PAPSMV----PATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAA 456
Query: 829 SRSHSVVQ---------QPESPVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPGS 879
S + + + + E P G V+ S +P T + T + F S
Sbjct: 457 SSASPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVF----SS 512
Query: 880 LGDP 883
+G P
Sbjct: 513 MGPP 516
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 46.2 bits (108), Expect = 1e-04
Identities = 98/392 (25%), Positives = 147/392 (37%), Gaps = 51/392 (13%)
Query: 471 VPPSSSLDPVAPFPVL--SVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDVSLAS 528
+P S+ L A P L SV P PLA V + A S + + + LA+
Sbjct: 1457 IPISAPLTVSASGPALLTSVTP-----PLAPVVPAAPGPPSLAPSGASPSASALTLGLAT 1511
Query: 529 AASAVESLKPALLAGQPLVYVPSASLFMLYGSLQEG-------PASGSGSERDDRSSEAP 581
A S S P G PL+ P++S S PAS S + AP
Sbjct: 1512 APSLSSSQTP----GHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAP 1567
Query: 582 ATVEL-SSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDLASPK 640
A L + A SA + L P + A S PL ++ P P + LAS +
Sbjct: 1568 AQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPS-PGAAPVLASSQ 1626
Query: 641 T---MGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENES 697
T + +S P + +PA + ++ +++ + +P + P+
Sbjct: 1627 TPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSP-----LPSPASTQTL 1681
Query: 698 TKEPSLLQYLCVQSPAGLNGFNVLLSGSQTP----PT----VGPSSGQLPSFSVPCMVLP 749
P+L L SP+ L G+ P PT + P+S +P+ + + P
Sbjct: 1682 ALAPALAPTLGGSSPS-----QTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAP 1736
Query: 750 SPPLGPFPVL-------YSPAMP-GPV-SSTLGALPNTGPVNFSLPGLGSIAQLLVGPTA 800
PPLGP L +PA P GP + TL P + + P L P
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVP 1796
Query: 801 VVNPKSS-TLPSADPQLQSQPSLNLSPVMSRS 831
+ P ++ TL A QS S S V+S S
Sbjct: 1797 TLGPAAAQTLALAPASTQSPASQASSLVVSAS 1828
Score = 37.7 bits (86), Expect = 0.049
Identities = 107/470 (22%), Positives = 161/470 (34%), Gaps = 84/470 (17%)
Query: 472 PPSSSLDP-VAPFPV-LSVDPEYCVNPLAHP----VFSVAQTDLQAFSMQNGLNGQVDVS 525
PPS + V P+ L + E C LA P + SVA ++ + S+ + + +
Sbjct: 2531 PPSVPISASVTNLPLGLRPEAELCAQALASPESLELASVASSETSSLSL---VPPKDLLP 2587
Query: 526 LASAASAVESLKPALLAGQPLVYVPSASLFMLYGSLQEGPASGSGSERD--DRSSEAPAT 583
+A V +L P + + + S+ G QE P S G+ E P
Sbjct: 2588 VAVEILPVSEKNLSLTPSAPSLTLEAGSI--PNGQEQEAPDSAEGTTLTVLPEGEELPLC 2645
Query: 584 VELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVMPKKPSD--STDLASPKT 641
V S+ + QE E R S E + P+KP + + ++A+P T
Sbjct: 2646 VSESNGLELPPSAASDEPLQEPLE--ADRTSEELTEAKTPTSSPEKPQELVTAEVAAPST 2703
Query: 642 MGNRASIP-------------LKDIHVNGQ------LPAAEEISGKATANSLVSSEWGNP 682
+ S P D+ + GQ P ++ K + E
Sbjct: 2704 SSSATSSPEGPSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVEEKEL 2763
Query: 683 SRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFS 742
R + + ST P + + + +SG ++ P +G PS S
Sbjct: 2764 VRR---RRQQRGAASTLVPGVSETSASPGSPSVRS----MSGPESSPPIGGPCEAAPSSS 2816
Query: 743 VPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAVV 802
LP+PP PF LG P N G A L + P AV
Sbjct: 2817 -----LPTPPQQPFIARR--------HIELGVTGGGSPEN------GDGALLAITPPAVK 2857
Query: 803 N-----PKSSTLPS-ADPQLQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLHQS 856
PK + P+ A + PS L + V PE+ + V PV +L
Sbjct: 2858 RRRGRPPKKNRSPADAGRGVDEAPSSTLKG-KTNGADPVPGPET-LIVADPVLEPQLIPG 2915
Query: 857 PVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQRRLEIP 906
P P+ P+ + R P L PV KRR R R L IP
Sbjct: 2916 PQPLGPQPVHR---------PNPLLSPVEKRR-----RGRPPKARDLPIP 2951
Score = 37.0 bits (84), Expect = 0.084
Identities = 35/114 (30%), Positives = 44/114 (38%), Gaps = 11/114 (9%)
Query: 749 PSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAVV---NPK 805
P PLGP PV PGP L A P GPV LP ++ GP + P
Sbjct: 1015 PRAPLGPVPV---RPPPGP---ELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPG 1068
Query: 806 SSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLHQSPVP 859
LP P S P + SP+ S + +P +P P + SP P
Sbjct: 1069 PVLLPPLQPNSGSLPQVLPSPLGVLSGT--SRPPTPTLSLKPTPPAPVRLSPAP 1120
Score = 32.3 bits (72), Expect = 2.1
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 725 SQTPPTVGPSSGQLP-SFSVPCMV---LPSPPLGPFPVLYSPAMPGPVSSTL-----GAL 775
S +P + G P + S P V LP P P P+ S + PVSST+ +L
Sbjct: 1380 SPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSL 1439
Query: 776 PNTGPVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQL 816
P + P P + + P V + L S P L
Sbjct: 1440 PISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPL 1480
Score = 31.2 bits (69), Expect = 4.6
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 729 PTVGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGL 788
PT GP LP+ +++ + P GP P++ + PGPV LP P+ P
Sbjct: 1036 PTPGPVPQVLPA----SLMVSASPAGP-PLIPASRPPGPV-----LLP---PLQ---PNS 1079
Query: 789 GSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPS----LNLSPVMSRSHSVVQQPES--PV 842
GS+ Q+L P V+ S T P L +P+ + LSP S + +P + P
Sbjct: 1080 GSLPQVLPSPLGVL---SGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPG 1136
Query: 843 YVGHPVSVVKLHQSPVPVTPKSI 865
Y P + + T ++
Sbjct: 1137 YTFPPAAATTTSTTTATATTTAV 1159
Score = 31.2 bits (69), Expect = 4.6
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Query: 733 PSSGQLPSFSVPCMVLPS-PPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSI 791
P S P +P +LPS PP P SPA P + T P L +
Sbjct: 2467 PISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCL--VTPS 2524
Query: 792 AQLLVGPTAV-VNPKSSTLP-SADPQLQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVS 849
+ LL+GP +V ++ + LP P+ + SP SV S + + P
Sbjct: 2525 SPLLLGPPSVPISASVTNLPLGLRPEAELCAQALASPESLELASVASSETSSLSLVPPKD 2584
Query: 850 VVKLHQSPVPVTPKSIQRT 868
++ + +PV+ K++ T
Sbjct: 2585 LLPVAVEILPVSEKNLSLT 2603
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 45.8 bits (107), Expect = 2e-04
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 36/260 (13%)
Query: 593 QKRLCEERKPQEEDEPATKRQSREYEDGPLSLVMPKKPSD-----STDLASPKTMGNRAS 647
Q +L ++++P +P +++Q ++ + + L+M + P S ++ P+ N S
Sbjct: 1006 QPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDS 1065
Query: 648 --IPLKDIHVNGQLPAAEEISGKATANSLVSSEWGNPSRNTDVEKPSKE---NESTKEPS 702
+P++ +G +P + G A+ + NT + S++ ES + PS
Sbjct: 1066 QRMPMQQ---SGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPS 1122
Query: 703 LLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPL---GPFPVL 759
SP SGS+ P G +PS +VLP L GP P
Sbjct: 1123 -------SSPLAEMASLPEASGSEAPSVPG-GPNNMPSH----VVLPQNQLMMTGPKPG- 1169
Query: 760 YSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQ 819
P P+S+T GA P PVN G + PT PK+ S P
Sbjct: 1170 -----PSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQT 1224
Query: 820 PSLNLSPVMSRSHSVVQQPE 839
P N P + + PE
Sbjct: 1225 P--NNRPPSTEPSEISLSPE 1242
>gi|194733742 Wolf-Hirschhorn syndrome candidate 2 protein [Homo
sapiens]
Length = 539
Score = 44.7 bits (104), Expect = 4e-04
Identities = 53/194 (27%), Positives = 68/194 (35%), Gaps = 51/194 (26%)
Query: 688 VEKPSKENESTKEPSLLQY----LCVQSPAGLNGFNVLLSGSQTP--PTVGPSSGQLPSF 741
VEKP+KE E+ E + Y + Q LN L S S P P+V P+S +PS
Sbjct: 294 VEKPAKE-ETVVENATPDYAAGLVSTQKLGSLNNEPALPSTSYLPSTPSVVPASSYIPSS 352
Query: 742 SVP-------CMVLPSPPLGPFPVL--------------YSPAMPGPVSSTLGALPNTGP 780
P P P P P L SPA P P + T P T P
Sbjct: 353 ETPPAPSSREASRPPEEPSAPSPTLPAQFKQRAPMYNSGLSPATPTPAAPTSPLTPTTPP 412
Query: 781 VNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLS---------PVMSRS 831
V PT P + P Q QP NLS M ++
Sbjct: 413 A--------------VAPTTQTPPVAMVAPQTQAPAQQQPKKNLSLTREQMFAAQEMFKT 458
Query: 832 HSVVQQPESPVYVG 845
+ V +PE + +G
Sbjct: 459 ANKVTRPEKALILG 472
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 44.3 bits (103), Expect = 5e-04
Identities = 89/361 (24%), Positives = 118/361 (32%), Gaps = 64/361 (17%)
Query: 564 GPASGSGSERDDRSSEAPAT-VELSS-APSAQKRLCEERKPQEEDEPATKRQSREYEDGP 621
GP G+ S R S A T V L APSA+ R P E + + E+
Sbjct: 157 GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR------PPTEGPRKSVSSASEHSTTE 210
Query: 622 LSLVMPKKPSDSTDLASPKTMG-NRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWG 680
S ++PS L P + + ++ PL PA S + T +
Sbjct: 211 PSPAARRRPSAGGGLQRPASRSLSSSATPLSS-------PARSGPSARGTPRAPAHPSQP 263
Query: 681 NPS-----RNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNG------FNVLLSGSQTPP 729
P R V P K+ P L SP+ L S TPP
Sbjct: 264 KPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPP 323
Query: 730 TVGPSSGQLPSFSVPCMVLPSPPLGP-------------FPVLYSPAMPGPVSSTLGALP 776
+ +S P+ LPSPPL P P L +P P P S L L
Sbjct: 324 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSP-PASPPLSPLA 382
Query: 777 NTGP------------VNFSLPGLGSIAQLLVGPTAVVNPKSSTLPS------ADPQLQS 818
P FS P + P + S+T PS A P LQ
Sbjct: 383 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQV 442
Query: 819 QPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFKTPG 878
PS SP MS S + Q P+ P+ + K P P P ++ + P
Sbjct: 443 PPSPPASPPMSPSATPPPQAPPPL-AAPPLQLAK----PPPQAPPALATPPLQALPSPPA 497
Query: 879 S 879
S
Sbjct: 498 S 498
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 43.9 bits (102), Expect = 7e-04
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 68/324 (20%)
Query: 619 DGPLSLVMPK-KPSDSTDLASPKTMGN----------RASIPLKDIHVNGQLPAAEEISG 667
+GPLSL + + + S + +P ++GN RA+ P+ + Q+ + + G
Sbjct: 667 NGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNH---SVQMNSMGSVPG 723
Query: 668 KATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCV-QSPAGLNGFNVLLSGSQ 726
A + S + +T+ N + P+ Q+L Q P+ +V + Q
Sbjct: 724 MAISPSRMPQPPNMMGAHTN-------NMMAQAPAQSQFLPQNQFPSSSGAMSVGMG--Q 774
Query: 727 TPPTVGPSSGQLPSFSVP---------CMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPN 777
P G S GQ+P ++P LP PP+ P+ +P P ++ + +L +
Sbjct: 775 PPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPP-PASTAAGMPSLQH 833
Query: 778 TGPVNFSLPGLGSIAQLLVGPTAVVN-------PKSSTLPSADPQLQSQPSLNLSPVMSR 830
T P + P + Q P+ V+ P ++PSA Q QS P++ +
Sbjct: 834 TTPPGMTPPQPAAPTQ----PSTPVSSSGQTPTPTPGSVPSA-TQTQSTPTVQ----AAA 884
Query: 831 SHSVVQQPESPVYVGHPVSVVKLHQSPVPV------TPKSIQRTHRETFFKTPGSLGD-- 882
V QP++PV + Q P PV TP S + TP S+
Sbjct: 885 QAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAE 944
Query: 883 ----------PVLKRRERNQSRNT 896
PVL+ + Q+ +T
Sbjct: 945 TNSQQPGPDVPVLEMKTETQAEDT 968
Score = 31.6 bits (70), Expect = 3.5
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 742 SVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAV 801
+VP LPSP P P + P + A P PV+ S G S+A+ T
Sbjct: 1838 NVPQQSLPSPTSAP-PGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVS 1896
Query: 802 VNPKSSTLPSADPQLQSQPS 821
+S +P+ P Q P+
Sbjct: 1897 TGKPTSQVPAPPPPAQPPPA 1916
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 43.9 bits (102), Expect = 7e-04
Identities = 74/324 (22%), Positives = 127/324 (39%), Gaps = 68/324 (20%)
Query: 619 DGPLSLVMPK-KPSDSTDLASPKTMGN----------RASIPLKDIHVNGQLPAAEEISG 667
+GPLSL + + + S + +P ++GN RA+ P+ + Q+ + + G
Sbjct: 705 NGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNH---SVQMNSMGSVPG 761
Query: 668 KATANSLVSSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCV-QSPAGLNGFNVLLSGSQ 726
A + S + +T+ N + P+ Q+L Q P+ +V + Q
Sbjct: 762 MAISPSRMPQPPNMMGAHTN-------NMMAQAPAQSQFLPQNQFPSSSGAMSVGMG--Q 812
Query: 727 TPPTVGPSSGQLPSFSVP---------CMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPN 777
P G S GQ+P ++P LP PP+ P+ +P P ++ + +L +
Sbjct: 813 PPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPP-PASTAAGMPSLQH 871
Query: 778 TGPVNFSLPGLGSIAQLLVGPTAVVN-------PKSSTLPSADPQLQSQPSLNLSPVMSR 830
T P + P + Q P+ V+ P ++PSA Q QS P++ +
Sbjct: 872 TTPPGMTPPQPAAPTQ----PSTPVSSSGQTPTPTPGSVPSA-TQTQSTPTVQ----AAA 922
Query: 831 SHSVVQQPESPVYVGHPVSVVKLHQSPVPV------TPKSIQRTHRETFFKTPGSLGD-- 882
V QP++PV + Q P PV TP S + TP S+
Sbjct: 923 QAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAE 982
Query: 883 ----------PVLKRRERNQSRNT 896
PVL+ + Q+ +T
Sbjct: 983 TNSQQPGPDVPVLEMKTETQAEDT 1006
Score = 31.6 bits (70), Expect = 3.5
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 742 SVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAV 801
+VP LPSP P P + P + A P PV+ S G S+A+ T
Sbjct: 1876 NVPQQSLPSPTSAP-PGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVS 1934
Query: 802 VNPKSSTLPSADPQLQSQPS 821
+S +P+ P Q P+
Sbjct: 1935 TGKPTSQVPAPPPPAQPPPA 1954
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.7 bits (99), Expect = 0.002
Identities = 94/416 (22%), Positives = 144/416 (34%), Gaps = 64/416 (15%)
Query: 526 LASAASAVESLKPALLAGQ-----PLVYVPSASLFMLYGSLQEGPASGSGSERDDRSSEA 580
+A A+ + PA LA + P + VPS + +E PA+ S E +
Sbjct: 1527 IAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVT 1586
Query: 581 PATVELSSAPSAQKRLCEER----------------KPQEEDEPATKRQSREYEDGPLSL 624
P+T + APS ++ L P E PAT P
Sbjct: 1587 PSTYK--GAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPP--- 1641
Query: 625 VMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWGNPSR 684
V P DS + T A++P + LPA + A LV+ P
Sbjct: 1642 VTPSSLKDSPTSPASVTCKMGATVP----QASKGLPAKK--GPTALKEVLVAPA---PES 1692
Query: 685 NTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVG-------PSSGQ 737
+ P+++ TK+ S P+ NG LS P + + G+
Sbjct: 1693 TPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGK 1752
Query: 738 LPSFSVPCMVLPSPPLGPFPVL---YSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQL 794
S S + P P+ + +P P S+++ A P+ PV SLP L
Sbjct: 1753 DASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSP-PV--SLP-------L 1802
Query: 795 LVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLH 854
P + PK LPS+ + PS L+P + P P+ G P V ++
Sbjct: 1803 APSPVPTLPPKQQFLPSSPGLVLESPSKPLAPA-DEDELLPLIPPEPISGGVPFQSVLVN 1861
Query: 855 QS-------PVPVTPKSIQRTHRETFFKTPGSLGDPVLKRRERNQSRNTSSAQRRL 903
PVP TP + Q + S D + E S ++ Q +L
Sbjct: 1862 MPTPKSAGIPVP-TPSAKQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQQAQL 1916
Score = 37.7 bits (86), Expect = 0.049
Identities = 48/175 (27%), Positives = 67/175 (38%), Gaps = 23/175 (13%)
Query: 727 TPPTVGPSSGQLPSFSVPCM----VLPSP---PLGPFPVLYSP--AMPGPVSSTLGALPN 777
TPP PS P+ + P +PSP P P + SP A PV+ A P+
Sbjct: 1370 TPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPS 1429
Query: 778 TGPVN------FSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRS 831
G + SL + + GP + TLP+ P +P ++ S
Sbjct: 1430 KGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQ--VATS 1487
Query: 832 HSVVQQPESPVYVGHPVSVVKLHQSP--VPVTPKS----IQRTHRETFFKTPGSL 880
S + P +P +G P + SP VP TP S I T KTP +L
Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATL 1542
Score = 34.7 bits (78), Expect = 0.42
Identities = 106/468 (22%), Positives = 153/468 (32%), Gaps = 66/468 (14%)
Query: 470 VVPPSSSLDPVA-PFPVLSVDPEYCVNPLAHPVFSVAQTDLQ-------AFSMQNGLNGQ 521
V PPS P A PFP + P P P S A T L A ++ + G
Sbjct: 1014 VTPPSPKGSPAATPFPKGASTPPAATPP--SPKGSPAATPLPKGAPTTPAATLPSPKGGP 1071
Query: 522 VDVSLASAASAVESLKPALLAG----------QPLVYVPSASLFMLYGSLQEG----PAS 567
SL A + + P+ G P P + L +G PA+
Sbjct: 1072 ATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAA 1131
Query: 568 GSGSERDDRSSEAPA---TVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSL 624
S + ++ P T ++ PS + L P + P T + G L+
Sbjct: 1132 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT---PPPKGAPTTPAATPPSPKGGLAT 1188
Query: 625 VMPK---------KPSDSTDLASPKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLV 675
PK PS LA+P G + G L T +
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1248
Query: 676 SSEWGNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLL------------- 722
S G P+ T K + + PSL L G V+
Sbjct: 1249 PSPKGGPA--TPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPP 1306
Query: 723 SGSQTPPTVGPSSGQLPSFSVPCMVLPSPP-LGPFPVLYSPAMPGPVSSTLGALPNTGPV 781
G+ TPP P S + + P P+PP + P +P +P S+ G T P
Sbjct: 1307 KGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGG--PTTPS 1364
Query: 782 NFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPESP 841
+ P + G A+ P P P + S SP + S + P +P
Sbjct: 1365 SKEGPTPPAATPSHKGGPAMTPPS----PKRGPAIPSPKGDPTSPAVI-PLSPKKAPATP 1419
Query: 842 VYVGHPVSVVKLHQSPVPVTPKSIQRTHRETFFK----TPGSLGDPVL 885
V + K +P VTP S+++ + K TP S GDP L
Sbjct: 1420 VTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL 1467
Score = 34.3 bits (77), Expect = 0.54
Identities = 57/281 (20%), Positives = 103/281 (36%), Gaps = 25/281 (8%)
Query: 577 SSEAPATVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVMPKKPSDSTDL 636
+S +P + AP L ++ PAT SR P + ++ KK
Sbjct: 1486 TSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATP-SSRRDPIAPTATLLSKK------- 1537
Query: 637 ASPKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWGNPSRNTDVEKPSKENE 696
+P T+ + ++ I +P+ ++ T ++ + + PS
Sbjct: 1538 -TPATLAPKEAL----IPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKG 1592
Query: 697 STKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQL-PSFSVPCMVLPSPPLGP 755
+ LL V SP+ + TPP V P S + P+ P SPP+ P
Sbjct: 1593 APSPKELLIPPAVTSPSPKE--------APTPPAVTPPSPEKGPATPAPKGTPTSPPVTP 1644
Query: 756 FPVLYSPAMPGPVSSTLGA-LPNTGPVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADP 814
+ SP P V+ +GA +P + G ++ ++LV P P + P
Sbjct: 1645 SSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGP 1704
Query: 815 QLQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLHQ 855
Q++ S SP + S + P+ P ++ + +
Sbjct: 1705 --QTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQK 1743
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.0 bits (97), Expect = 0.003
Identities = 94/378 (24%), Positives = 124/378 (32%), Gaps = 68/378 (17%)
Query: 564 GPASGSGSERDDRSSEAPAT-VELSS-APSAQKRLCEE--------RKPQEEDEPATKRQ 613
GP G+ S R S A T V L APSA+ R E EP+ +
Sbjct: 166 GPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAAR 225
Query: 614 SREYEDGPLSLVMPKKPSDS-TDLASPKTMGNRA-SIPLKDIHVNGQLPAAEEI------ 665
R G L + S S T L+SP G A P H + P +
Sbjct: 226 RRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV 285
Query: 666 -----SGKATANSLVSSEWGNPSRNTDVEK------PSKENESTKEPSLLQYLCVQ--SP 712
L SS PS + ++ P+ + S+ L L + SP
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSP 345
Query: 713 AGLNGFNVLLSGSQTPPTVGPSSGQLPSFSVPCMVLPSPPLGP-------------FPVL 759
+ L S TPP+ +S P+ LPSPPL P P L
Sbjct: 346 SAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPL 405
Query: 760 YSPAMPGPVSSTLGALPNTGP------------VNFSLPGLGSIAQLLVGPTAVVNPKSS 807
+P P P S L L P FS P + P + S+
Sbjct: 406 QAPPSP-PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA 464
Query: 808 TLPS------ADPQLQSQPSLNLSPVMSRSHSVVQQPESPVYVGHPVSVVKLHQSPVPVT 861
T PS A P LQ PS SP MS S + Q P+ P+ + K P P
Sbjct: 465 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL-AAPPLQLAK----PPPQA 519
Query: 862 PKSIQRTHRETFFKTPGS 879
P ++ + P S
Sbjct: 520 PPALATPPLQALPSPPAS 537
>gi|148833494 interferon regulatory factor 5 isoform d [Homo
sapiens]
Length = 514
Score = 41.6 bits (96), Expect = 0.003
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Query: 689 EKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFSVPCM-- 746
E+ +E PSL VQS + +++L + PPT+ P + + P+ P +
Sbjct: 143 EEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLRPPTLQPPTLQP 202
Query: 747 --VLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAVVNP 804
VL P P P+ P P L + GP+ SLP G QLL P +++P
Sbjct: 203 PVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGE--QLL--PDLLISP 258
Query: 805 KSSTLPSADPQLQSQ 819
LP D +++ Q
Sbjct: 259 --HMLPLTDLEIKFQ 271
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 41.6 bits (96), Expect = 0.003
Identities = 79/314 (25%), Positives = 110/314 (35%), Gaps = 61/314 (19%)
Query: 566 ASGSGSERDDRSSEAPATVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLV 625
+ G + R SSE P+T S P+A + P + +T YE S+V
Sbjct: 133 SEGRNTSRPPTSSEEPST---SVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVV 189
Query: 626 MPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWGNPSRN 685
ST + G S+PL A G +T+ ++E +
Sbjct: 190 PTPDEGPSTSVLPTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATE----GLS 245
Query: 686 TDVEKPSKENESTKEPSLLQYLCVQS--PAGLNGFNVLL-------SGSQTPPT------ 730
T V E ST P+ S PA +G ++ L S + PPT
Sbjct: 246 TPVPPTRDEGPSTSVPATPGEGPSTSVLPAASDGQSISLVPTRGKGSSTSVPPTATEGLS 305
Query: 731 --VGPSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLP-- 786
V P++G+ S SVP P+P G P +S+++ P GP LP
Sbjct: 306 TSVQPTAGEGSSTSVP----PTPG-GGLSTSVPPTATEELSTSVPPTPGEGPSTSVLPIP 360
Query: 787 --GL--------------------GSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNL 824
GL G A LV PTA P SS LP+ P
Sbjct: 361 GEGLSTSVPPTASDGSDTSVPPTPGEGASTLVQPTAPDGPGSSVLPN--------PGEGP 412
Query: 825 SPVMSRSHSVVQQP 838
S + S S SV + P
Sbjct: 413 STLFSSSASVDRNP 426
Score = 34.3 bits (77), Expect = 0.54
Identities = 48/204 (23%), Positives = 74/204 (36%), Gaps = 17/204 (8%)
Query: 626 MPKKPSDSTDLAS------PKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEW 679
+P+ PSDS L P T S V + A SG+ T +S
Sbjct: 45 VPQGPSDSQILQGLCASEGPSTSVLPTSAEGPSTFVPPTISEASSASGQPT----ISEGP 100
Query: 680 GNPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLP 739
G T E S T L + + + G N S + +V P++ ++P
Sbjct: 101 GTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPPTASEVP 160
Query: 740 SFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSL--PGLGSIAQLLVG 797
S S+P P+P G + A GP S+++ P+ GP L PG G + +
Sbjct: 161 STSLP----PTPGEGTSTSVPPTAYEGP-STSVVPTPDEGPSTSVLPTPGEGPGTSVPLA 215
Query: 798 PTAVVNPKSSTLPSADPQLQSQPS 821
T ++ P P P+
Sbjct: 216 ATEGLSTSVQATPDEGPSTSVPPT 239
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 41.6 bits (96), Expect = 0.003
Identities = 45/147 (30%), Positives = 59/147 (40%), Gaps = 14/147 (9%)
Query: 722 LSGSQTPPTVGPSSGQLPSFSVPCMV-LPSPPLG--PFPVLYSPAMPGPVSSTL-GALPN 777
L+G PP P +P + P + P PPL P+P+ YSP+ PV T GALP
Sbjct: 166 LAGDAPPPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSLPVGPTAHGALP- 224
Query: 778 TGPVNFSLPGLGSIAQLLVGPT---AVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSV 834
P F + S +GPT A + P+ + S PQ P P +
Sbjct: 225 --PAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPP----RPGYPGTPMG 278
Query: 835 VQQPESPVYVGHPVSVVKLHQSPVPVT 861
P P+ G S QSP P T
Sbjct: 279 ASGPGYPLRGGRAPSPGYPQQSPYPAT 305
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 41.6 bits (96), Expect = 0.003
Identities = 69/330 (20%), Positives = 117/330 (35%), Gaps = 22/330 (6%)
Query: 562 QEGPASGSGSERDDRSSEAPAT-VELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDG 620
+ GP S SG A T V+L + SA +E P + +K + + +
Sbjct: 1575 RSGPPSKSGKRGPFDDQPAGTTGVDLINGSSAHH---QEGVPNGTGQKNSKDSTGKKRED 1631
Query: 621 PLSLVMPKKPSDSTDLASPKTMGNRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEWG 680
P PKKP + D S + N AS+ + D H E++ S ++ +
Sbjct: 1632 PKP--GPKKPKEKVDALSQFDLNNYASVVIIDDH--------PEVTVIEDPQSNLNDDGF 1681
Query: 681 NPSRNTDVEKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPS 740
+ +K ++ E K+ + + + A G + S+ PP
Sbjct: 1682 TEVVSKKQQKRLQDEERRKKEEQVIQVWNKKNANEKGRS---QTSKLPPRFAKKQATGIQ 1738
Query: 741 FSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTA 800
+ +P P P S ++P S+ L A P + S P S ++ T+
Sbjct: 1739 QAQSSASVPPLASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTS 1798
Query: 801 VVNPKSSTLP---SADPQLQSQPSLNLSPVMSRSHSVVQQPESPVY--VGHPVSVVKLHQ 855
P S P SA S + + + S S +P+ V P SV L
Sbjct: 1799 APVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILAS 1858
Query: 856 SPVPVTPKSIQRTHRETFFKTPGSLGDPVL 885
+ +P+ ++ T T S PV+
Sbjct: 1859 ASIPILASALASTSAPTPAPAASSPAAPVI 1888
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 40.4 bits (93), Expect = 0.008
Identities = 83/364 (22%), Positives = 122/364 (33%), Gaps = 53/364 (14%)
Query: 468 KRVVPP---SSSLDPVAPFPVLSVDPEYCVNPLAHPVFSVAQTDLQAFSMQNGLNGQVDV 524
K PP S++ VAP S L PV S + + +F + G+
Sbjct: 1382 KHTEPPVTSSATTTSVAPPAATSTSSTAVFGSL--PVTSAGSSGVISFGGTSLSAGKTSF 1439
Query: 525 SLASA---ASAVESLKPALLAGQPLVYVPSASLFMLYGSLQEG------PASGSGSERDD 575
S S ++ S P A PL P++ + +GSL P S S +
Sbjct: 1440 SFGSQQTNSTVPPSAPPPTTAATPL---PTSFPTLSFGSLLSSATTPSLPMSAGRSTEEA 1496
Query: 576 RSSEAPATVELSSAPSAQKRLCEERKPQEEDEPATKRQSREYEDGPLSLVMPK-----KP 630
SS P S ++ L EE+ Q P Q+ + L P
Sbjct: 1497 TSSALPEKPGDSEVSASAASLLEEQ--QSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTA 1554
Query: 631 SDSTDL------ASPKTMG-----NRASIPLKDIHVNGQLPAAEEISGKATANSLVSSEW 679
+ ST L A+P T G A P V GQ A ++ +S
Sbjct: 1555 ASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSST 1614
Query: 680 GNPSRNTDVEKPSKENESTKEPSLLQYLCV--QSPAGLNG--FNVLLSGSQTPPTVGPSS 735
S T + P E+ ++ V Q PA + FN L + + T P+ P
Sbjct: 1615 PIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVF 1674
Query: 736 GQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLL 795
GQ+ + + P + G +ST A P FS P G+ A +
Sbjct: 1675 GQVAASTAPSLF--------------GQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGV 1720
Query: 796 VGPT 799
G T
Sbjct: 1721 FGQT 1724
Score = 35.4 bits (80), Expect = 0.24
Identities = 44/159 (27%), Positives = 60/159 (37%), Gaps = 29/159 (18%)
Query: 714 GLNGFNVLLSGSQTPPTVGPSSGQLPSF--------------------SVPCMVLPS-PP 752
G +GF L + P P+ PSF S P S PP
Sbjct: 549 GSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPP 608
Query: 753 LGPFPVLYSPAMPGPVS--STLGALPNTGPVNFS-LPG-LGSIAQLLVGPTAVVNPKSS- 807
+ PF PA GP+S + L A P++ P+ S LP G AQ P + KS
Sbjct: 609 MSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPR 668
Query: 808 -TLPSADPQLQSQPSLNLSPVMSRSHSVVQQPESPVYVG 845
T P+A P S + +L P ++ + PV G
Sbjct: 669 ITPPAAKP--GSPQAKSLQPAVAEKQGHQWKDSDPVMAG 705
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 40.4 bits (93), Expect = 0.008
Identities = 51/182 (28%), Positives = 59/182 (32%), Gaps = 31/182 (17%)
Query: 681 NPSRNTDVEKPSKENESTKEPSL-------------LQYLCVQSPAGLNGFNVLLSGSQT 727
NP+ T P K E+ +P L +C SPA LS Q
Sbjct: 704 NPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPS---LSSGQL 760
Query: 728 PPTVGPSSGQLPSFSVPC-----MVLPSPPL---GPFPVLYSPAMPGPVSSTLGALPNTG 779
PP + P+ PS PC + P PPL P P S A P P S L
Sbjct: 761 PPLLIPTD---PSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQS 817
Query: 780 PVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPE 839
P LP L P V P S P L S S + S S S P
Sbjct: 818 P----LPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPS 873
Query: 840 SP 841
P
Sbjct: 874 PP 875
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 40.4 bits (93), Expect = 0.008
Identities = 51/182 (28%), Positives = 59/182 (32%), Gaps = 31/182 (17%)
Query: 681 NPSRNTDVEKPSKENESTKEPSL-------------LQYLCVQSPAGLNGFNVLLSGSQT 727
NP+ T P K E+ +P L +C SPA LS Q
Sbjct: 905 NPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPS---LSSGQL 961
Query: 728 PPTVGPSSGQLPSFSVPC-----MVLPSPPL---GPFPVLYSPAMPGPVSSTLGALPNTG 779
PP + P+ PS PC + P PPL P P S A P P S L
Sbjct: 962 PPLLIPTD---PSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQS 1018
Query: 780 PVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPE 839
P LP L P V P S P L S S + S S S P
Sbjct: 1019 P----LPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPS 1074
Query: 840 SP 841
P
Sbjct: 1075 PP 1076
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 40.4 bits (93), Expect = 0.008
Identities = 51/182 (28%), Positives = 59/182 (32%), Gaps = 31/182 (17%)
Query: 681 NPSRNTDVEKPSKENESTKEPSL-------------LQYLCVQSPAGLNGFNVLLSGSQT 727
NP+ T P K E+ +P L +C SPA LS Q
Sbjct: 905 NPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPS---LSSGQL 961
Query: 728 PPTVGPSSGQLPSFSVPC-----MVLPSPPL---GPFPVLYSPAMPGPVSSTLGALPNTG 779
PP + P+ PS PC + P PPL P P S A P P S L
Sbjct: 962 PPLLIPTD---PSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQS 1018
Query: 780 PVNFSLPGLGSIAQLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSVVQQPE 839
P LP L P V P S P L S S + S S S P
Sbjct: 1019 P----LPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPS 1074
Query: 840 SP 841
P
Sbjct: 1075 PP 1076
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 40.4 bits (93), Expect = 0.008
Identities = 40/136 (29%), Positives = 48/136 (35%), Gaps = 15/136 (11%)
Query: 733 PSSGQLPSFSVPCMVLPSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIA 792
P S + P SVP V+ S P P PA PV+ G P S I
Sbjct: 708 PLSAEGPHLSVPASVIVSAP----PPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQI- 762
Query: 793 QLLVGPTAVVNPKSSTLPSADPQLQSQPSLNLSPVMSRSHSV---VQQPESPVYVGHPVS 849
P A P PS+ P L Q L SP + H + P P V P S
Sbjct: 763 -----PAAA--PLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPS 815
Query: 850 VVKLHQSPVPVTPKSI 865
LH P P P ++
Sbjct: 816 EPPLHPCPPPQAPPTL 831
>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
Length = 504
Score = 40.0 bits (92), Expect = 0.010
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 689 EKPSKENESTKEPSLLQYLCVQSPAGLNGFNVLLSGSQTPPTVGPSSGQLPSFSVPCMVL 748
E+ +E PSL VQS + +++L + PPT+ P + Q P +VL
Sbjct: 143 EEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPPTLQPPTLQ------PPVVL 196
Query: 749 PSPPLGPFPVLYSPAMPGPVSSTLGALPNTGPVNFSLPGLGSIAQLLVGPTAVVNPKSST 808
P P P+ P P L + GP+ SLP G QLL P +++P
Sbjct: 197 GPPAPDPSPLAPPPGNPAGFRELLSEVLEPGPLPASLPPAGE--QLL--PDLLISP--HM 250
Query: 809 LPSADPQLQSQ 819
LP D +++ Q
Sbjct: 251 LPLTDLEIKFQ 261
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,810,168
Number of Sequences: 37866
Number of extensions: 2023945
Number of successful extensions: 7773
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 356
Number of HSP's that attempted gapping in prelim test: 6954
Number of HSP's gapped (non-prelim): 1126
length of query: 911
length of database: 18,247,518
effective HSP length: 111
effective length of query: 800
effective length of database: 14,044,392
effective search space: 11235513600
effective search space used: 11235513600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.