NUP214 26309

Name: NUP214	Sequence: fasta or formatted (2090aa)		NCBI GI: 33946327
Description: nucleoporin 214kDa		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 225 6 C cysteine 0.6 13 1 D aspartate 2.6 55 2 E glutamate 4.1 86 2 F phenylalanine 5.2 109 2 G glycine 8.6 180 3 H histidine 1.3 27 2 I isoleucine 2.3 48 2 K lysine 4.6 96 3 L leucine 6.8 142 2 M methionine 1.3 27 2 N asparagine 2.7 56 2 P proline 9.4 196 3 Q glutamine 4.7 98 2 R arginine 2.1 44 2 S serine 16.7 350 5 T threonine 8.6 180 3 V valine 6.0 126 3 W tryptophan 0.5 10 1 Y tyrosine 1.1 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleoporin 214kDa MUC17 0.032 mucin 17 MUC12 0.031 PREDICTED: mucin 12 LOC100288540 0.031 PREDICTED: hypothetical protein XP_002342775 POM121C 0.030 POM121 membrane glycoprotein (rat)-like FLG2 0.029 filaggrin family member 2 POM121 0.028 nuclear pore membrane protein 121 MUC12 0.027 PREDICTED: mucin 12, cell surface associated LOC100294501 0.027 PREDICTED: hypothetical protein LOC729792 0.026 PREDICTED: hypothetical protein LOC729792 0.026 PREDICTED: hypothetical protein LOC729792 0.026 PREDICTED: hypothetical protein LOC100294238 0.026 PREDICTED: hypothetical protein LOC100294204 0.026 PREDICTED: hypothetical protein LOC100294136 0.026 PREDICTED: hypothetical protein LOC100294091 0.026 PREDICTED: hypothetical protein LOC730401 0.026 PREDICTED: hypothetical protein LOC100294249 0.026 PREDICTED: hypothetical protein XP_002344067 MUC5AC 0.025 mucin 5AC MUC5B 0.025 mucin 5, subtype B, tracheobronchial NUP153 0.025 nucleoporin 153kDa MUC12 0.024 PREDICTED: mucin 12 TRO 0.024 trophinin isoform 5 MUC3A 0.023 PREDICTED: mucin 3A, intestinal MUC3A 0.023 PREDICTED: mucin 3A, cell surface associated, parti... MUC6 0.023 mucin 6, gastric MUC4 0.022 mucin 4 isoform a NACA 0.022 nascent polypeptide-associated complex alpha subuni... NUP98 0.022 nucleoporin 98kD isoform 4 NUP98 0.022 nucleoporin 98kD isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.