IRF5 28907

Name: IRF5	Sequence: fasta or formatted (504aa)		NCBI GI: 4504727
Description: interferon regulatory factor 5 isoform a		Referenced in: Interferon
Other entries for this name: alt prot [498aa] interferon regulatory factor 5 isoform b alt prot [488aa] interferon regulatory factor 5 isoform c alt prot [488aa] interferon regulatory factor 5 isoform c alt prot [514aa] interferon regulatory factor 5 isoform d alt prot [498aa] interferon regulatory factor 5 isoform b alt prot [488aa] interferon regulatory factor 5 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 29 2 C cysteine 2.0 10 1 D aspartate 4.8 24 1 E glutamate 7.1 36 8 F phenylalanine 4.0 20 2 G glycine 6.2 31 1 H histidine 2.0 10 2 I isoleucine 3.8 19 1 K lysine 4.6 23 2 L leucine 11.3 57 3 M methionine 1.8 9 1 N asparagine 2.8 14 1 P proline 13.1 66 3 Q glutamine 7.1 36 2 R arginine 5.2 26 2 S serine 6.0 30 1 T threonine 3.6 18 1 V valine 4.8 24 2 W tryptophan 2.2 11 1 Y tyrosine 2.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 interferon regulatory factor 5 isoform a IRF5 0.991 interferon regulatory factor 5 isoform d IRF5 0.957 interferon regulatory factor 5 isoform c IRF5 0.957 interferon regulatory factor 5 isoform c IRF5 0.957 interferon regulatory factor 5 isoform c IRF5 0.955 interferon regulatory factor 5 isoform b IRF5 0.955 interferon regulatory factor 5 isoform b IRF6 0.411 interferon regulatory factor 6 IRF4 0.174 interferon regulatory factor 4 IRF8 0.165 interferon regulatory factor 8 IRF3 0.141 interferon regulatory factor 3 IRF7 0.136 interferon regulatory factor 7 isoform d IRF7 0.136 interferon regulatory factor 7 isoform a IRF7 0.129 interferon regulatory factor 7 isoform b IRF9 0.115 interferon-stimulated transcription factor 3, gamma ... IRF2 0.086 interferon regulatory factor 2 IRF1 0.081 interferon regulatory factor 1 KDM6B 0.026 lysine (K)-specific demethylase 6B MLL2 0.023 myeloid/lymphoid or mixed-lineage leukemia 2 MLL4 0.022 myeloid/lymphoid or mixed-lineage leukemia 4 RBM26 0.021 RNA binding motif protein 26 LOC100288352 0.020 PREDICTED: hypothetical protein XP_002343764 LOC100293297 0.020 PREDICTED: similar to hCG1785205 LOC100288352 0.020 PREDICTED: similar to hCG1785205 WBP11 0.020 WW domain binding protein 11 FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 LOC100134663 0.018 PREDICTED: hypothetical protein, partial RERE 0.017 atrophin-1 like protein isoform b RERE 0.017 atrophin-1 like protein isoform a RERE 0.017 atrophin-1 like protein isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.