Guide to the Human Genome
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Name: E2F6 Sequence: fasta or formatted (281aa) NCBI GI: 109637795
Description:

E2F transcription factor 6

Referenced in:

E2F Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         14           1
 C cysteine            1.1          3           1
 D aspartate           7.1         20           2
 E glutamate           9.6         27           4
 F phenylalanine       1.8          5           1
 G glycine             4.3         12           2
 H histidine           1.8          5           1
 I isoleucine          5.7         16           1
 K lysine              6.4         18           2
 L leucine            10.3         29           3
 M methionine          1.4          4           1
 N asparagine          4.3         12           1
 P proline             5.3         15           1
 Q glutamine           5.3         15           2
 R arginine            7.5         21           3
 S serine              7.8         22           3
 T threonine           4.6         13           1
 V valine              8.2         23           1
 W tryptophan          0.4          1           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   E2F transcription factor 6 
E2F2                  0.309   E2F transcription factor 2 
E2F3                  0.307   E2F transcription factor 3 
E2F1                  0.256   E2F transcription factor 1 
E2F5                  0.189   E2F transcription factor 5 isoform 2 
E2F5                  0.189   E2F transcription factor 5 isoform 1 
E2F4                  0.184   E2F transcription factor 4 
E2F7                  0.055   E2F transcription factor 7 
E2F5                  0.045   E2F transcription factor 5 isoform 3 
E2F8                  0.042   E2F family member 8 
TFDP1                 0.015   transcription factor Dp-1 
TFDP2                 0.013   transcription factor Dp-2 (E2F dimerization partner 2...
MYH3                  0.013   myosin, heavy chain 3, skeletal muscle, embryonic [H...
TFDP3                 0.013   transcription factor Dp family, member 3 
NSD1                  0.013   nuclear receptor binding SET domain protein 1 isofor...
NSD1                  0.013   nuclear receptor binding SET domain protein 1 isofor...
DST                   0.013   dystonin isoform 1e precursor 
PPP1R12A              0.013   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.013   protein phosphatase 1, regulatory (inhibitor) subunit...
MYT1                  0.013   myelin transcription factor 1 
E4F1                  0.011   p120E4F 
PPP1R3G               0.009   protein phosphatase 1, regulatory (inhibitor) subun...
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
WBP5                  0.009   WW domain binding protein 5 
WBP5                  0.009   WW domain binding protein 5 
WBP5                  0.009   WW domain binding protein 5 
WBP5                  0.009   WW domain binding protein 5 
RBM19                 0.009   RNA binding motif protein 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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