Guide to the Human Genome
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Name: E2F4 Sequence: fasta or formatted (413aa) NCBI GI: 12669915
Description:

E2F transcription factor 4

Referenced in:

E2F Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         27           2
 C cysteine            1.5          6           1
 D aspartate           5.1         21           1
 E glutamate           8.2         34           2
 F phenylalanine       1.5          6           1
 G glycine             6.3         26           2
 H histidine           1.2          5           1
 I isoleucine          4.4         18           1
 K lysine              4.8         20           2
 L leucine            11.6         48           2
 M methionine          1.0          4           1
 N asparagine          3.1         13           1
 P proline            10.4         43           4
 Q glutamine           4.6         19           2
 R arginine            3.1         13           2
 S serine             13.3         55          13
 T threonine           5.1         21           2
 V valine              6.3         26           1
 W tryptophan          0.7          3           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   E2F transcription factor 4 
E2F5                  0.413   E2F transcription factor 5 isoform 1 
E2F5                  0.412   E2F transcription factor 5 isoform 2 
E2F2                  0.179   E2F transcription factor 2 
E2F5                  0.167   E2F transcription factor 5 isoform 3 
E2F3                  0.164   E2F transcription factor 3 
E2F1                  0.141   E2F transcription factor 1 
E2F6                  0.122   E2F transcription factor 6 
E2F7                  0.038   E2F transcription factor 7 
PRDM2                 0.038   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.038   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.038   retinoblastoma protein-binding zinc finger protein i...
SRRM2                 0.038   splicing coactivator subunit SRm300 
TNRC18                0.038   trinucleotide repeat containing 18 
E2F8                  0.035   E2F family member 8 
FLJ22184              0.034   PREDICTED: hypothetical protein FLJ22184 
CNOT3                 0.032   CCR4-NOT transcription complex, subunit 3 
ZBTB4                 0.032   zinc finger and BTB domain containing 4 
ZBTB4                 0.032   zinc finger and BTB domain containing 4 
SRCAP                 0.030   Snf2-related CBP activator protein 
NAF1                  0.029   nuclear assembly factor 1 homolog isoform b 
NAF1                  0.029   nuclear assembly factor 1 homolog isoform a 
DACH1                 0.028   dachshund homolog 1 isoform b 
DACH1                 0.028   dachshund homolog 1 isoform a 
DACH1                 0.028   dachshund homolog 1 isoform c 
MLLT1                 0.028   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MUC2                  0.028   mucin 2 precursor 
ATN1                  0.028   atrophin-1 
ATN1                  0.028   atrophin-1 
MUC7                  0.027   mucin 7, secreted precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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