Guide to the Human Genome
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Name: E2F5 Sequence: fasta or formatted (345aa) NCBI GI: 134142809
Description:

E2F transcription factor 5 isoform 2

Referenced in:

E2F Pathways

Other entries for this name:
alt prot [346aa] E2F transcription factor 5 isoform 1
alt prot [185aa] E2F transcription factor 5 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         22           3
 C cysteine            1.2          4           1
 D aspartate           7.0         24           2
 E glutamate           5.5         19           1
 F phenylalanine       2.0          7           1
 G glycine             6.7         23           3
 H histidine           1.4          5           1
 I isoleucine          5.8         20           2
 K lysine              5.8         20           2
 L leucine            10.1         35           2
 M methionine          1.4          5           1
 N asparagine          4.6         16           2
 P proline             8.4         29           5
 Q glutamine           9.0         31           2
 R arginine            3.2         11           2
 S serine              9.6         33           4
 T threonine           4.3         15           2
 V valine              5.2         18           2
 W tryptophan          0.6          2           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   E2F transcription factor 5 isoform 2 
E2F5                  0.992   E2F transcription factor 5 isoform 1 
E2F5                  0.516   E2F transcription factor 5 isoform 3 
E2F4                  0.490   E2F transcription factor 4 
E2F2                  0.206   E2F transcription factor 2 
E2F3                  0.200   E2F transcription factor 3 
E2F1                  0.182   E2F transcription factor 1 
E2F6                  0.150   E2F transcription factor 6 
E2F7                  0.044   E2F transcription factor 7 
E2F8                  0.041   E2F family member 8 
MYH8                  0.026   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH7                  0.024   myosin, heavy chain 7, cardiac muscle, beta 
BOD1L                 0.024   biorientation of chromosomes in cell division 1-like...
MYH1                  0.024   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.023   myosin, heavy polypeptide 4, skeletal muscle 
CRTC1                 0.023   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.023   mucoepidermoid carcinoma translocated 1 isoform 1 [...
ATXN7                 0.023   ataxin 7 isoform b 
ATXN7                 0.023   ataxin 7 isoform a 
RFX1                  0.021   regulatory factor X1 
HCN2                  0.021   hyperpolarization activated cyclic nucleotide-gated...
ESPN                  0.021   espin 
PACS1                 0.021   phosphofurin acidic cluster sorting protein 1 
TFDP2                 0.021   transcription factor Dp-2 (E2F dimerization partner 2...
MYH6                  0.021   myosin heavy chain 6 
EVL                   0.021   Enah/Vasp-like 
RANBP9                0.020   RAN binding protein 9 
LOC729350             0.020   PREDICTED: hypothetical protein 
LOC729350             0.020   PREDICTED: hypothetical protein 
LOC729350             0.020   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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