Guide to the Human Genome
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Name: MTSS1L Sequence: fasta or formatted (747aa) NCBI GI: 46195763
Description:

metastasis suppressor 1-like

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         74           2
 C cysteine            1.3         10           1
 D aspartate           5.1         38           2
 E glutamate           6.2         46           2
 F phenylalanine       1.7         13           1
 G glycine             6.6         49           3
 H histidine           1.6         12           1
 I isoleucine          3.3         25           2
 K lysine              5.1         38           3
 L leucine             8.2         61           3
 M methionine          1.7         13           1
 N asparagine          2.0         15           1
 P proline             9.0         67           3
 Q glutamine           4.3         32           3
 R arginine            6.2         46           2
 S serine             12.7         95           5
 T threonine           8.2         61           3
 V valine              4.0         30           2
 W tryptophan          0.8          6           1
 Y tyrosine            2.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metastasis suppressor 1-like 
MTSS1                 0.511   metastasis suppressor 1 
MUC6                  0.029   mucin 6, gastric 
BAIAP2                0.024   BAI1-associated protein 2 isoform 4 
BAIAP2                0.024   BAI1-associated protein 2 isoform 3 
BAIAP2                0.024   BAI1-associated protein 2 isoform 1 
BAIAP2                0.024   BAI1-associated protein 2 isoform 2 
TNRC18                0.022   trinucleotide repeat containing 18 
MUC21                 0.020   mucin 21 
NACA                  0.020   nascent polypeptide-associated complex alpha subuni...
LOC100133756          0.019   PREDICTED: hypothetical protein, partial 
MUC12                 0.019   PREDICTED: mucin 12 
SRRM2                 0.019   splicing coactivator subunit SRm300 
ARID1A                0.019   AT rich interactive domain 1A isoform a 
ARID1A                0.019   AT rich interactive domain 1A isoform b 
MUC5B                 0.018   mucin 5, subtype B, tracheobronchial 
ATN1                  0.017   atrophin-1 
ATN1                  0.017   atrophin-1 
MUC17                 0.017   mucin 17 
POLR2A                0.017   DNA-directed RNA polymerase II A 
MAST4                 0.016   microtubule associated serine/threonine kinase fami...
KIAA1522              0.016   hypothetical protein LOC57648 
LOC100294236          0.016   PREDICTED: similar to diffuse panbronchiolitis crit...
MUC12                 0.016   PREDICTED: mucin 12, cell surface associated 
BAIAP2L1              0.016   BAI1-associated protein 2-like 1 
DSPP                  0.016   dentin sialophosphoprotein preproprotein 
SCAF1                 0.016   SR-related CTD-associated factor 1 
LOC100128719          0.016   PREDICTED: hypothetical protein, partial 
LOC100128719          0.016   PREDICTED: hypothetical protein, partial 
CRKRS                 0.016   Cdc2-related kinase, arginine/serine-rich isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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