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Search of human proteins with 9789865
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9789865 eukaryotic translation initiation factor 4E nuclear
import factor 1 [Homo sapiens]
(985 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9789865 eukaryotic translation initiation factor 4E nuclear i... 1960 0.0
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 49 2e-05
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 44 6e-04
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 44 6e-04
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 44 7e-04
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 44 7e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 0.001
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 0.001
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 44 0.001
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 44 0.001
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 43 0.001
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ... 43 0.002
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ... 43 0.002
gi|221139926 NHS-like 1 [Homo sapiens] 42 0.002
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa... 42 0.002
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 42 0.002
gi|166064029 angiomotin isoform 1 [Homo sapiens] 42 0.003
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 42 0.004
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 42 0.004
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 42 0.004
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 42 0.004
gi|117938768 GNAS complex locus alex [Homo sapiens] 42 0.004
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 0.004
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 40 0.008
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 40 0.011
gi|50428940 mediator complex subunit 25 [Homo sapiens] 40 0.011
gi|151301154 mucin 6, gastric [Homo sapiens] 40 0.014
gi|148612879 polyhomeotic like 3 [Homo sapiens] 39 0.018
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 39 0.018
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.018
>gi|9789865 eukaryotic translation initiation factor 4E nuclear
import factor 1 [Homo sapiens]
Length = 985
Score = 1960 bits (5078), Expect = 0.0
Identities = 985/985 (100%), Positives = 985/985 (100%)
Query: 1 MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGV 60
MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGV
Sbjct: 1 MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGV 60
Query: 61 WDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVDPRERVKEDDLDVVFSPQRRS 120
WDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVDPRERVKEDDLDVVFSPQRRS
Sbjct: 61 WDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVDPRERVKEDDLDVVFSPQRRS 120
Query: 121 FGGGCHVTAAVSSRRSGSPLEKDSDGLRLLGGRRIGSGRIISARTFEKDHRLSDKDLRDL 180
FGGGCHVTAAVSSRRSGSPLEKDSDGLRLLGGRRIGSGRIISARTFEKDHRLSDKDLRDL
Sbjct: 121 FGGGCHVTAAVSSRRSGSPLEKDSDGLRLLGGRRIGSGRIISARTFEKDHRLSDKDLRDL 180
Query: 181 RDRDRERDFKDKRFRREFGDSKRVFGERRRNDSYTEEEPEWFSAGPTSQSETIELTGFDD 240
RDRDRERDFKDKRFRREFGDSKRVFGERRRNDSYTEEEPEWFSAGPTSQSETIELTGFDD
Sbjct: 181 RDRDRERDFKDKRFRREFGDSKRVFGERRRNDSYTEEEPEWFSAGPTSQSETIELTGFDD 240
Query: 241 KILEEDHKGRKRTRRRTASVKEGIVECNGGVAEEDEVEVILAQEPAADQEVPRDAVLPEQ 300
KILEEDHKGRKRTRRRTASVKEGIVECNGGVAEEDEVEVILAQEPAADQEVPRDAVLPEQ
Sbjct: 241 KILEEDHKGRKRTRRRTASVKEGIVECNGGVAEEDEVEVILAQEPAADQEVPRDAVLPEQ 300
Query: 301 SPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRWFSNPSRSGSRSSSLGSTPHE 360
SPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRWFSNPSRSGSRSSSLGSTPHE
Sbjct: 301 SPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRWFSNPSRSGSRSSSLGSTPHE 360
Query: 361 ELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILEMLQKAKVDLKPLLSSLSANK 420
ELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILEMLQKAKVDLKPLLSSLSANK
Sbjct: 361 ELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILEMLQKAKVDLKPLLSSLSANK 420
Query: 421 EKLKESSHSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGD 480
EKLKESSHSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGD
Sbjct: 421 EKLKESSHSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGD 480
Query: 481 MTAFNKLVSTMKASGTLPSQPKVSRNLESHLMSPAEIPGQPVPKNILQELLGQPVQRPAS 540
MTAFNKLVSTMKASGTLPSQPKVSRNLESHLMSPAEIPGQPVPKNILQELLGQPVQRPAS
Sbjct: 481 MTAFNKLVSTMKASGTLPSQPKVSRNLESHLMSPAEIPGQPVPKNILQELLGQPVQRPAS 540
Query: 541 SNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGPQQLLG 600
SNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGPQQLLG
Sbjct: 541 SNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGPQQLLG 600
Query: 601 DPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGF 660
DPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGF
Sbjct: 601 DPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGF 660
Query: 661 RNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGK 720
RNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGK
Sbjct: 661 RNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGK 720
Query: 721 AALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKE 780
AALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKE
Sbjct: 721 AALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKE 780
Query: 781 QDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVH 840
QDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVH
Sbjct: 781 QDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVH 840
Query: 841 PQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQ 900
PQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQ
Sbjct: 841 PQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQ 900
Query: 901 QLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLAKWFG 960
QLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLAKWFG
Sbjct: 901 QLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLAKWFG 960
Query: 961 SDVLQQPLPSMPAKVISVDELEYRQ 985
SDVLQQPLPSMPAKVISVDELEYRQ
Sbjct: 961 SDVLQQPLPSMPAKVISVDELEYRQ 985
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 49.3 bits (116), Expect = 2e-05
Identities = 79/339 (23%), Positives = 133/339 (39%), Gaps = 47/339 (13%)
Query: 496 TLPS---QPKVSRNLESHLMSPAEIPGQPVPKNILQELLGQPVQRPASSNLLSGLMGSLE 552
T+P+ +PK +R E PG+ +L +L + V P S L+ +
Sbjct: 2429 TMPATRPKPKKARAAEESGAKGPRRPGEEA--ELLVKLDHEGVTSPKSKKAKEALLLRED 2486
Query: 553 PTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSP------IGFTPGPQQLLGDPFQGM 606
P G + P LS AA + P+ P P + PGP G F+
Sbjct: 2487 PGAG--GWQEPKSLLSLGSYPPAAGSS--EPKAPWPKATDGDLAQEPGP----GLTFEDS 2538
Query: 607 RKPMSPITAQMSQ--LELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGF---- 660
P SP AQ Q E +++ + + +++ G+ + D+ DG
Sbjct: 2539 GNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTG 2598
Query: 661 -RNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASG 719
RN +++ +P +SSS + ++S +S S S S +S
Sbjct: 2599 GRNCSAASSRAASPASSSSSSSSSSSSSSSSSSS-------------SSSSSSSSSSSSS 2645
Query: 720 KAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTK 779
++ S + +S + SSSS + D DSS +++ + + + S + + TK
Sbjct: 2646 SSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATK 2705
Query: 780 EQ-DYRPKA--TGRKTPTLASPVPTTPFLRPVHQVPLVP 815
+ RP A G+KTP +P P P +P PL P
Sbjct: 2706 QAGKARPSAHSPGKKTP---APQPQAPPPQPTQ--PLQP 2739
Score = 31.2 bits (69), Expect = 5.0
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 680 SSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPA--SGKAALGDSKEDTQKASEEN 737
++P P A SP +V + K + +EP +G A D +++
Sbjct: 1944 AAPTPGARGPDPSSPDKAKLAVEKGRKARKLRGPKEPGFEAGPEASDDDLWTRRRSERIF 2003
Query: 738 LLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKT-PTLA 796
L +S+ A ++P T K S + +P A R +D R K G++ P
Sbjct: 2004 LHDASAAAPAPVSTAPAT--KTSRCAKGGPLSPRKDAGRAKDRKDPRKKKKGKEAGPGAG 2061
Query: 797 SPVPTTPFLRPVHQVP 812
P P P L + P
Sbjct: 2062 LPPPRAPALPSEARAP 2077
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 44.3 bits (103), Expect = 6e-04
Identities = 99/399 (24%), Positives = 141/399 (35%), Gaps = 75/399 (18%)
Query: 572 QTRAASADYLRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQMSQ---LELQQA--A 626
Q++ A A + + P +L P G+ +P +P A L +Q A A
Sbjct: 569 QSQPAPAGPAATTVLQGVTLPPSAVAMLNTP-DGLVQPATPAAATGEAAPVLTVQPAPQA 627
Query: 627 LEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAA 686
++ P L +Q QP PQ + Q T P+P G +SSP
Sbjct: 628 PPAVSTPLPLGLQQPQAQQP----PQAPTPQAAAP--PQATTPQPSP---GLASSPE--- 675
Query: 687 SITSMLSPSFTPTSVIRK----MYESKEKSKEE----------PASGKAALGDSKEDTQK 732
I PS TPT+++ + M+ +E+S++ PAS + +D
Sbjct: 676 KIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAP 735
Query: 733 ASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKT 792
A+ + + D +SP ++ A P S + +A +
Sbjct: 736 ATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPS-------LPHQAPLGDS 788
Query: 793 PTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLL---- 848
P L SP PT P RP + V P P H P P LP +
Sbjct: 789 PHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQA---------PPTLPGIFVIQN 839
Query: 849 QTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLH 908
Q GV PP + + P G P PL S P P P P HL
Sbjct: 840 QLGVPPPASN----PAPTAP--GPPQPPLRPQSQPPEGPLPPAP-HL------------- 879
Query: 909 PPGSGSHAAAVSVQTT---PQNVPSRSGLPHMHSQLEHR 944
PP S S A A S +T+ P PS L SQ H+
Sbjct: 880 PPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHK 918
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 44.3 bits (103), Expect = 6e-04
Identities = 81/344 (23%), Positives = 125/344 (36%), Gaps = 55/344 (15%)
Query: 661 RNRQQRVTKSPAPVHRGNSSSPAPAAS-------ITSMLSPSFTPTSVIRKMYESKEKSK 713
R R+ VTK P P G SSP+P A+ I+S L P S +R+ +
Sbjct: 1600 RGREPAVTKDPGP-GGGRDSSPSPRAAEELLQRCISSALPRRRPPVSGLRRRKPRATRLD 1658
Query: 714 EEPASGKAALGDSKEDTQKASEENLLSSSSV--------------PSADRDSSPTTNSKL 759
E PA G G+ + +AS+ + + ++ +A R++S ++S L
Sbjct: 1659 ERPAEGSRERGEEAAGSDRASDLDSVEWRAIQEGANSIVTWLHQAAAATREASSESDSIL 1718
Query: 760 SALQRSSCSTPLS-QANRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVP 818
S + S + L +R ++ + + R A+ V T+ R P P P
Sbjct: 1719 SFVSGLSVGSTLQPPKHRKGRQAEGEMGSARRPEKRGAASVKTSGSPRS----PAGPEKP 1774
Query: 819 MVRPAHQLHPGLVQRMLAQGV--HPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYP 876
R + PG+ + + V P P G P + + ++ P L QP P
Sbjct: 1775 --RGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGP---RATPRKVAPPCLAQPAAP 1829
Query: 877 LPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPH 936
P PG QQ RS LH P S A +S P+R
Sbjct: 1830 AKV-------PSPG---------QQRSRS-LHRPAKTSELATLSQPPRSATPPARLAKTP 1872
Query: 937 MHSQLEHRPSQ----RSSSPVGLAKWFGSDVLQQPLPSMPAKVI 976
S + P+ R PV A P+P PA+ +
Sbjct: 1873 SSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTL 1916
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 43.9 bits (102), Expect = 7e-04
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 24/226 (10%)
Query: 710 EKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCST 769
E +++ A + D ++ + +N L SSS S S+PTT + ++L +T
Sbjct: 1780 ESTRQATQLINALIKDPDKEIDELIPKNRLKSSSANSKIGSSAPTTTAANTSLMGIKMTT 1839
Query: 770 PLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQV-PLVP-HVPMVRPAHQLH 827
+ T AT P ++S PV+ V P P +P+ P Q
Sbjct: 1840 VALSSTSQT--------ATALTVPAISSASTHKTIKNPVNNVRPGFPVSLPLAYPPPQFA 1891
Query: 828 PGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNP 887
L+ Q + P LP G PP Q GP +P P A + +P
Sbjct: 1892 HALLAAQTFQQIRPPRLPMTHFGGTFPPA------QSTWGPFPVRPLSPARATN----SP 1941
Query: 888 RPG-TPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRS 932
+P P H Q S ++ GS + + + ++ VP S
Sbjct: 1942 KPHMVPRH---SNQNSSGSQVNSAGSLTSSPTTTTSSSASTVPGTS 1984
Score = 37.4 bits (85), Expect = 0.070
Identities = 94/450 (20%), Positives = 161/450 (35%), Gaps = 65/450 (14%)
Query: 523 PKNILQELLGQPVQRPASSNLLSGLMGSLEPTT-----SLLGQRAPSPPLSQVFQTRAA- 576
P + EL+ + + +S+N +GS PTT SL+G + + LS QT A
Sbjct: 1796 PDKEIDELIPKNRLKSSSAN---SKIGSSAPTTTAANTSLMGIKMTTVALSSTSQTATAL 1852
Query: 577 ----------------SADYLRPRIPSPIGFTPGPQQ-----LLGDPFQGMRKPMSPITA 615
+ +RP P + P Q L FQ +R P P+T
Sbjct: 1853 TVPAISSASTHKTIKNPVNNVRPGFPVSLPLAYPPPQFAHALLAAQTFQQIRPPRLPMTH 1912
Query: 616 QMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFR-NRQQRVTKSPAPV 674
Q+ + +A N +P ++ G + N +T SP
Sbjct: 1913 FGGTFPPAQSTWGPFPVRPLSPARATNSPKPHMVPRHSNQNSSGSQVNSAGSLTSSPTTT 1972
Query: 675 HRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKAS 734
+S+S P S SPS SV R+++ + K+ + + +
Sbjct: 1973 -TSSSASTVPGTSTNG--SPS--SPSVRRQLFVTVVKTSNATTTTVTTTASNNNTAPTNA 2027
Query: 735 EENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPT 794
+ ++ SSP+ ++ + R+S PL + + A+ +
Sbjct: 2028 TYPMPTAKEHYPVSSPSSPSPPAQPGGVSRNS---PLDCGSASPNKV-----ASSSEQEA 2079
Query: 795 LASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLP 854
+ PV T RP P+ + H Q+ V + P L Q+ V P
Sbjct: 2080 GSPPVVETTNTRP-------PNSSSSSGSSSAHSN--QQQPPGSVSQEPRPPLQQSQVPP 2130
Query: 855 PG--MDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGS 912
P M + L S P+ +P+ + P+ P P TP+ +++ + PP
Sbjct: 2131 PEVRMTVPPLATSSAPVA------VPSTA-PVTYPMPQTPMGCPQPTPKMETPAIRPPPH 2183
Query: 913 GS---HAAAVSVQTTPQNVPSRSGLPHMHS 939
G+ H + SVQ + V S + + HS
Sbjct: 2184 GTTAPHKNSASVQNSSVAVLSVNHIKRPHS 2213
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 43.9 bits (102), Expect = 7e-04
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 24/226 (10%)
Query: 710 EKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCST 769
E +++ A + D ++ + +N L SSS S S+PTT + ++L +T
Sbjct: 1529 ESTRQATQLINALIKDPDKEIDELIPKNRLKSSSANSKIGSSAPTTTAANTSLMGIKMTT 1588
Query: 770 PLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQV-PLVP-HVPMVRPAHQLH 827
+ T AT P ++S PV+ V P P +P+ P Q
Sbjct: 1589 VALSSTSQT--------ATALTVPAISSASTHKTIKNPVNNVRPGFPVSLPLAYPPPQFA 1640
Query: 828 PGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNP 887
L+ Q + P LP G PP Q GP +P P A + +P
Sbjct: 1641 HALLAAQTFQQIRPPRLPMTHFGGTFPPA------QSTWGPFPVRPLSPARATN----SP 1690
Query: 888 RPG-TPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRS 932
+P P H Q S ++ GS + + + ++ VP S
Sbjct: 1691 KPHMVPRH---SNQNSSGSQVNSAGSLTSSPTTTTSSSASTVPGTS 1733
Score = 37.4 bits (85), Expect = 0.070
Identities = 94/450 (20%), Positives = 161/450 (35%), Gaps = 65/450 (14%)
Query: 523 PKNILQELLGQPVQRPASSNLLSGLMGSLEPTT-----SLLGQRAPSPPLSQVFQTRAA- 576
P + EL+ + + +S+N +GS PTT SL+G + + LS QT A
Sbjct: 1545 PDKEIDELIPKNRLKSSSAN---SKIGSSAPTTTAANTSLMGIKMTTVALSSTSQTATAL 1601
Query: 577 ----------------SADYLRPRIPSPIGFTPGPQQ-----LLGDPFQGMRKPMSPITA 615
+ +RP P + P Q L FQ +R P P+T
Sbjct: 1602 TVPAISSASTHKTIKNPVNNVRPGFPVSLPLAYPPPQFAHALLAAQTFQQIRPPRLPMTH 1661
Query: 616 QMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFR-NRQQRVTKSPAPV 674
Q+ + +A N +P ++ G + N +T SP
Sbjct: 1662 FGGTFPPAQSTWGPFPVRPLSPARATNSPKPHMVPRHSNQNSSGSQVNSAGSLTSSPTTT 1721
Query: 675 HRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKAS 734
+S+S P S SPS SV R+++ + K+ + + +
Sbjct: 1722 -TSSSASTVPGTSTNG--SPS--SPSVRRQLFVTVVKTSNATTTTVTTTASNNNTAPTNA 1776
Query: 735 EENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPT 794
+ ++ SSP+ ++ + R+S PL + + A+ +
Sbjct: 1777 TYPMPTAKEHYPVSSPSSPSPPAQPGGVSRNS---PLDCGSASPNKV-----ASSSEQEA 1828
Query: 795 LASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLP 854
+ PV T RP P+ + H Q+ V + P L Q+ V P
Sbjct: 1829 GSPPVVETTNTRP-------PNSSSSSGSSSAHSN--QQQPPGSVSQEPRPPLQQSQVPP 1879
Query: 855 PG--MDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGS 912
P M + L S P+ +P+ + P+ P P TP+ +++ + PP
Sbjct: 1880 PEVRMTVPPLATSSAPVA------VPSTA-PVTYPMPQTPMGCPQPTPKMETPAIRPPPH 1932
Query: 913 GS---HAAAVSVQTTPQNVPSRSGLPHMHS 939
G+ H + SVQ + V S + + HS
Sbjct: 1933 GTTAPHKNSASVQNSSVAVLSVNHIKRPHS 1962
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.5 bits (101), Expect = 0.001
Identities = 75/302 (24%), Positives = 98/302 (32%), Gaps = 28/302 (9%)
Query: 671 PAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDT 730
PAP R + P S++S S T S + S + PAS + + +
Sbjct: 192 PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS 251
Query: 731 QKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGR 790
S S+ P A S L AL+ + P A P AT
Sbjct: 252 PARSGP---SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 791 KTPTLASPVPTTPFLRP---------VHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHP 841
+ L S P T P +PL P P P+ Q P +Q
Sbjct: 309 PSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTS 368
Query: 842 QHLPSLLQTGVLPPGMDLSHLQ--------GISGPILGQPFYPLPAAS---HPLLNPRPG 890
P+L T P LS L ++ P L P P P AS PL P P
Sbjct: 369 LGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAP--PSPPASPPLSPLATPSPQ 426
Query: 891 TPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSS 950
P LA+ L ++ PP S A S +P PS + L P Q
Sbjct: 427 APNALAV---HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPP 483
Query: 951 SP 952
SP
Sbjct: 484 SP 485
Score = 38.5 bits (88), Expect = 0.031
Identities = 109/419 (26%), Positives = 136/419 (32%), Gaps = 83/419 (19%)
Query: 520 QPVPKNILQELLGQPVQRPASSNLLSGLMGSLEPTTSLLG----QRAPSPPLS------- 568
+P P + G +QRPAS +L S P S RAP+ P
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 278
Query: 569 -----QVFQTRAASADYLRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLELQ 623
QV R +A L P SP+ TP P L Q P P T S L Q
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLA-TPSPSAAL----QSQAPPTLPATPHSSSLTCQ 333
Query: 624 QAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAP-VHRGNSSSP 682
A LA P A + P Q T +P + +S P
Sbjct: 334 LATPLPLAPPSPSAPPSLQTLPSPPATPP-----------SQATTSLGSPTLQATHSFLP 382
Query: 683 APAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSS 742
+P S + P P + + + P S A+ S T N L
Sbjct: 383 SPPLSPLATPPPQAPPALALPPL--------QAPPSPPASPPLSPLATPSPQAPNAL--- 431
Query: 743 SVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKAT--GRKTPTLASP-- 798
+V SP + + A S P+S P AT + P+LA+P
Sbjct: 432 AVHLLQAPFSPPPSPPVQAPFSPPASPPVS------------PSATPPSQAPPSLAAPPL 479
Query: 799 -VPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGM 857
VP +P P P P P Q P L L P P L T PP
Sbjct: 480 QVPPSPPASP-------PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT---PP-- 527
Query: 858 DLSHLQGISGPILGQ-PFYP---LPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGS 912
L L GQ PF P LP + PL P P P LA Q+ S PP S
Sbjct: 528 -LQALPSPPASFPGQAPFSPSASLPMS--PLATPPPQAPPVLAAPLLQVPPS---PPAS 580
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 43.5 bits (101), Expect = 0.001
Identities = 112/475 (23%), Positives = 154/475 (32%), Gaps = 53/475 (11%)
Query: 498 PSQPKVSRNLESHLMSPAEIPGQPVPKNILQELLGQPVQRPASSNLLSGLMGSLE-PTTS 556
PSQPK + L++ L P P + L L P+ P+ S + + + T
Sbjct: 269 PSQPK-PKGLQA-LRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATP 326
Query: 557 LLGQRAPSPPLSQVFQTR--AASADYLRPRIPSPIGFTPG--PQQLLGDPFQGMRKPMSP 612
L PSPPL+ + SA +PSP P P + P Q P S
Sbjct: 327 LPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQA---PPSL 383
Query: 613 ITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGF----RNRQQRVT 668
T Q+ + A P LA+ + G P + T R Q +T
Sbjct: 384 QTIPPIQVPHSLTSPSLQAPPSPLALSSLQA-TTSLGSPTLQATHSFLTMSPRQTQASLT 442
Query: 669 KSPAPVHRGNSSSPAPAA-------SITSMLSPSFTPTS---VIRKMYESKEKSKEEPAS 718
P S P A + + LSP+ +P S I + + P +
Sbjct: 443 SPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQA 502
Query: 719 GKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYT 778
++L +TQ SS + PS + T L L S PL A+
Sbjct: 503 PLSSLIMPPLETQ--------SSLAPPSLQTPPASLTTPPLENLP-SLAPPPLQTASA-- 551
Query: 779 KEQDYRPKATGR-KTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQ 837
P T +TP +P P P+ P + P Q P L L
Sbjct: 552 ------PLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQG 605
Query: 838 GVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAM 897
P P PP + L LQ P P PL P P P LA+
Sbjct: 606 LPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPL-------SPLATPSPQAPNALAV 658
Query: 898 VQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSP 952
L ++ PP S A S +P PS + L P Q SP
Sbjct: 659 ---HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 710
Score = 42.0 bits (97), Expect = 0.003
Identities = 111/456 (24%), Positives = 157/456 (34%), Gaps = 54/456 (11%)
Query: 520 QPVPKNILQELLGQPVQRPASSNLLSGLMGSLEPTTSLLGQR----APSPPLS------- 568
+P P + G +QRPAS +L S P S R AP+ P
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 278
Query: 569 -----QVFQTRAASADYLRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLELQ 623
QV R +A L P SP+ TP P P +P+ A +
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLA-TPSPSGTKARPVPPPDNAATPLPATLPPSP-- 335
Query: 624 QAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPA 683
LA P LA + + P T Q + + P+ S
Sbjct: 336 -----PLATPLPLAPPSPSAPPSLQTLPSPPATPPS----QAPPSMTTPPMQAPPSLQTI 386
Query: 684 PAASIT-SMLSPSF-TPTSVIRKMYESKEKSKEEPA--SGKAALGDSKEDTQKASEENLL 739
P + S+ SPS P S + S P + + L S TQ + L
Sbjct: 387 PPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQAS-----L 441
Query: 740 SSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQA-NRYTKEQDYRPKATGRKTPTLASP 798
+S S P++ SP + LS T LS A + + P + +LAS
Sbjct: 442 TSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPL---QALSSLASH 498
Query: 799 VPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMD 858
P P L + PL + P+ Q P + + + P P LQT P +
Sbjct: 499 SPQAP-LSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENL-PSLAPPPLQTASAP--LT 554
Query: 859 LSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAA 918
HL+ P PL A PL P P TP +A Q ++ PP G +
Sbjct: 555 TPHLETPPCPAP----CPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPP 610
Query: 919 VS-VQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPV 953
+S + T P P LP L+ PS +S P+
Sbjct: 611 LSPLATPPPQAPPXLALP----PLQAPPSPPASPPL 642
Score = 38.9 bits (89), Expect = 0.024
Identities = 109/517 (21%), Positives = 160/517 (30%), Gaps = 80/517 (15%)
Query: 496 TLPSQPKVSRNLESHLMSPAEIPGQPV-----PKNILQELLGQPVQRPASSNLLSGLMGS 550
TLPS P + M+ + P P + L +Q P S LS L +
Sbjct: 356 TLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQAT 415
Query: 551 -------LEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGPQQLLGDPF 603
L+ T S L S +R AS P + +P+ P P
Sbjct: 416 TSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASP------PL 469
Query: 604 QGMRKP-MSPITAQMSQLELQ----------QAALEGLALPHDLAVQAANFYQPGFGKPQ 652
Q P +SP+++ ++ LQ QA L L +P L Q++ P P
Sbjct: 470 QTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMP-PLETQSS-LAPPSLQTPP 527
Query: 653 VDRTRDGFRNRQQRVTKSPAPVHRGNSS------------SPAPAASITSMLS--PSFTP 698
T N + +P P+ ++ +P P + S L+ P TP
Sbjct: 528 ASLTTPPLENLP---SLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETP 584
Query: 699 TSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSK 758
+S+ ++ P G + S T L+ +P SP +
Sbjct: 585 SSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLA---LPPLQAPPSPPASPP 641
Query: 759 LSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVP 818
LS L S P + A + SP P+ P P P P
Sbjct: 642 LSPLATPSPQAPNALAVHLLQAP--------------FSPPPSPPVQAPFSPPASPPVSP 687
Query: 819 MVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLP 878
P Q P L L P P + + PP ++ P L P P P
Sbjct: 688 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP----PPLAAPPLQVP--PSP 741
Query: 879 AASHPL---LNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLP 935
AS P+ P P P LA Q+ PP + + P P P
Sbjct: 742 PASPPMSPSATPPPRVPPLLAAPPLQV------PPSPPASLPMSPLAKPPPQAPPALATP 795
Query: 936 HMHSQLEHRPSQRSSSPVGLAKWFGSDVLQQPLPSMP 972
+ + S +P + L P P P
Sbjct: 796 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 832
Score = 32.3 bits (72), Expect = 2.2
Identities = 90/434 (20%), Positives = 141/434 (32%), Gaps = 112/434 (25%)
Query: 583 PRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAAN 642
PR P P+ TP ++LG RKP++ + + G +P
Sbjct: 33 PRPPPPV--TPAALRVLGAAGAVGRKPLAE----------RAGGIGGATIPESA------ 74
Query: 643 FYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVI 702
P+ TR + + ++ PA RG + PA S + SP
Sbjct: 75 --------PRAGPTRSAGTSSRNPASRPPAS-GRGERAPPAKNTSPGPVSSPG------- 118
Query: 703 RKMYESKEKSKEEPASGKAALGDSKEDTQ---KASEENLLSSSSVPSADRDSSPTTNSKL 759
+ ++ P G+ L S E+T KA+E S+ S + S PT +
Sbjct: 119 ----RASGTTRPGPL-GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPS 173
Query: 760 SALQRSSCST---------------------PLSQANRYTKEQDYRPKATGRKTPTLASP 798
A+ R S + P + ++ P R+ P+
Sbjct: 174 PAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGG 233
Query: 799 VP----------TTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLL 848
+ TP P P P PAH P P+ L +L
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPSARGTPRA-PAHPSQP-----------KPKGLQALR 281
Query: 849 QTGVLPPGMDLSHLQG--ISGPIL--------GQPFYPLPAASHPL---LNPRP--GTPL 893
V PP D + G S P+ +P P A+ PL L P P TPL
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPL 341
Query: 894 HLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPV 953
LA PP + + ++ + P PS++ ++ PS ++ P+
Sbjct: 342 PLA------------PPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPI 389
Query: 954 GLAKWFGSDVLQQP 967
+ S LQ P
Sbjct: 390 QVPHSLTSPSLQAP 403
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 43.5 bits (101), Expect = 0.001
Identities = 73/274 (26%), Positives = 101/274 (36%), Gaps = 40/274 (14%)
Query: 664 QQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAAL 723
Q +T+S P SS P S T L+PS TPT P+S
Sbjct: 31 QPILTRSSTPTLTP-SSPPTLTPSNTPTLTPSNTPTLT--------------PSSTPTLT 75
Query: 724 GDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDY 783
S T + + +L+ SS P+ S PT + S + L+ +N T
Sbjct: 76 PSS---TPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 784 RPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHV-PMVRPAHQLHPGLVQRMLAQGVHPQ 842
P T TPTL TP RP+ P + P RP ++ R + P
Sbjct: 133 TPTLTPSSTPTL------TPSSRPILTRSSTPTLTPSSRP-------ILTRSSTPTLTPS 179
Query: 843 HLPSLL--QTGVLPPGMDLSHLQGISGPILGQPFYP-LPAASHPLLNPRPGTPLHLAMVQ 899
P+L T L P L S PIL + P L +S P+L P TP +
Sbjct: 180 STPTLTPSSTPTLTPS-STPTLTPSSRPILTRSSTPTLTPSSRPILTP-SSTPTLTPSSR 237
Query: 900 QQLQRS---VLHPPGSGSHAAAVSVQTTPQNVPS 930
L RS L P + + + + TP N P+
Sbjct: 238 PILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPT 271
Score = 40.4 bits (93), Expect = 0.008
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 679 SSSPAPAASITSMLSPSFTPT-SVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEEN 737
SS+P S T L+PS TPT + + ++ + S + L S T S
Sbjct: 179 SSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRP 238
Query: 738 LLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTL 795
+L+ SS P+ S+PT + S + L+ +N T P T TPTL
Sbjct: 239 ILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTL 296
Score = 33.9 bits (76), Expect = 0.77
Identities = 59/210 (28%), Positives = 78/210 (37%), Gaps = 46/210 (21%)
Query: 692 LSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDS 751
L+PS TPT S L S T S + +L+ SS P+ S
Sbjct: 2 LTPSNTPTLT---------------PSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSS 46
Query: 752 SPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPVP-----TTPFLR 806
PT S + L+ +N T P T TPTL +P P +TP L
Sbjct: 47 PPTLT--------PSNTPTLTPSNTPTLTPSSTPTLTPSSTPTL-TPQPILTRSSTPTLT 97
Query: 807 PVHQVPLVP-HVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLL--QTGVLPPGMDLSHLQ 863
P L P + P + P++ P L P + P+L T L P L
Sbjct: 98 PSSPPTLTPSNTPTLTPSNT--PTLT---------PSNTPTLTPSSTPTLTPS-STPTLT 145
Query: 864 GISGPILGQPFYP-LPAASHPLLNPRPGTP 892
S PIL + P L +S P+L R TP
Sbjct: 146 PSSRPILTRSSTPTLTPSSRPILT-RSSTP 174
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 43.5 bits (101), Expect = 0.001
Identities = 73/274 (26%), Positives = 101/274 (36%), Gaps = 40/274 (14%)
Query: 664 QQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAAL 723
Q +T+S P SS P S T L+PS TPT P+S
Sbjct: 31 QPILTRSSTPTLTP-SSPPTLTPSNTPTLTPSNTPTLT--------------PSSTPTLT 75
Query: 724 GDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDY 783
S T + + +L+ SS P+ S PT + S + L+ +N T
Sbjct: 76 PSS---TPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 784 RPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHV-PMVRPAHQLHPGLVQRMLAQGVHPQ 842
P T TPTL TP RP+ P + P RP ++ R + P
Sbjct: 133 TPTLTPSSTPTL------TPSSRPILTRSSTPTLTPSSRP-------ILTRSSTPTLTPS 179
Query: 843 HLPSLL--QTGVLPPGMDLSHLQGISGPILGQPFYP-LPAASHPLLNPRPGTPLHLAMVQ 899
P+L T L P L S PIL + P L +S P+L P TP +
Sbjct: 180 STPTLTPSSTPTLTPS-STPTLTPSSRPILTRSSTPTLTPSSRPILTP-SSTPTLTPSSR 237
Query: 900 QQLQRS---VLHPPGSGSHAAAVSVQTTPQNVPS 930
L RS L P + + + + TP N P+
Sbjct: 238 PILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPT 271
Score = 40.4 bits (93), Expect = 0.008
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 679 SSSPAPAASITSMLSPSFTPT-SVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEEN 737
SS+P S T L+PS TPT + + ++ + S + L S T S
Sbjct: 179 SSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRP 238
Query: 738 LLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTL 795
+L+ SS P+ S+PT + S + L+ +N T P T TPTL
Sbjct: 239 ILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTL 296
Score = 33.9 bits (76), Expect = 0.77
Identities = 59/210 (28%), Positives = 78/210 (37%), Gaps = 46/210 (21%)
Query: 692 LSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDS 751
L+PS TPT S L S T S + +L+ SS P+ S
Sbjct: 2 LTPSNTPTLT---------------PSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSS 46
Query: 752 SPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPVP-----TTPFLR 806
PT S + L+ +N T P T TPTL +P P +TP L
Sbjct: 47 PPTLT--------PSNTPTLTPSNTPTLTPSSTPTLTPSSTPTL-TPQPILTRSSTPTLT 97
Query: 807 PVHQVPLVP-HVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLL--QTGVLPPGMDLSHLQ 863
P L P + P + P++ P L P + P+L T L P L
Sbjct: 98 PSSPPTLTPSNTPTLTPSNT--PTLT---------PSNTPTLTPSSTPTLTPS-STPTLT 145
Query: 864 GISGPILGQPFYP-LPAASHPLLNPRPGTP 892
S PIL + P L +S P+L R TP
Sbjct: 146 PSSRPILTRSSTPTLTPSSRPILT-RSSTP 174
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 43.1 bits (100), Expect = 0.001
Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 14/152 (9%)
Query: 679 SSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENL 738
S++P S T L+PS TPT + + S L S T S
Sbjct: 89 SNTPTLTPSSTPTLTPSSTPTL-------TPSSTPTLTPSSTPTLTPSSTPTLTPSSTPT 141
Query: 739 LSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLA-S 797
L+ SS P+ S+PT + S + L+ ++ T RP T TPTL S
Sbjct: 142 LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPS 201
Query: 798 PVPT-----TPFLRPVHQVPLVP-HVPMVRPA 823
PT TP L P + L+P P + P+
Sbjct: 202 STPTLTPSSTPTLTPSNTPTLIPSSTPTLTPS 233
Score = 40.0 bits (92), Expect = 0.011
Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 679 SSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENL 738
SS+P S T L+PS TPT + + S + L S T S
Sbjct: 153 SSTPTLTPSSTPTLTPSSTPTL-------TPSSTPTLTPSSRPILTRSSTPTLTPSSTPT 205
Query: 739 LSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASP 798
L+ SS P+ ++PT + S + L+ ++R T + P T TPTL
Sbjct: 206 LTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPSSTPTLTP- 264
Query: 799 VPTTPFLRPV---HQV 811
+TP L P HQV
Sbjct: 265 -SSTPTLTPSSLWHQV 279
Score = 31.6 bits (70), Expect = 3.8
Identities = 54/197 (27%), Positives = 74/197 (37%), Gaps = 34/197 (17%)
Query: 739 LSSSSVPSADRDSSPTTNSKLSALQRSSCSTP-LSQANRYTKEQDYRPKATGRKTPTLAS 797
L+ SS P+ ++PT + S + CSTP L+ +N T P T TPTL
Sbjct: 54 LTPSSPPTLTPSNTPTL-TPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTP 112
Query: 798 PVPTTPFLRPVHQVPLVP-HVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLL--QTGVLP 854
+TP L P L P P + P+ P L R + P P+L T L
Sbjct: 113 --SSTPTLTPSSTPTLTPSSTPTLTPSST--PTLT-RSSTPTLTPSSTPTLTPSSTPTLT 167
Query: 855 PGMDLSHLQGISGPILGQPFYP-LPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSG 913
P S P L P L +S P+L R TP L P +
Sbjct: 168 PS---------STPTLTPSSTPTLTPSSRPILT-RSSTP-------------TLTPSSTP 204
Query: 914 SHAAAVSVQTTPQNVPS 930
+ + + TP N P+
Sbjct: 205 TLTPSSTPTLTPSNTPT 221
>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
sapiens]
Length = 386
Score = 42.7 bits (99), Expect = 0.002
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 26/145 (17%)
Query: 817 VPMVRPAHQLHP-----GLVQRMLAQGVHPQHLPSLLQT----GVLPPGMDLSHLQGISG 867
VP+V+P+H +HP + G HP H+PS + + PP D+ +S
Sbjct: 142 VPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSP 201
Query: 868 PILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQN 927
+GQ PL SH ++ PG H G H A V+ Q ++
Sbjct: 202 GGVGQITPPLGWFSHHMIPGPPGP----------------HTTGI-PHPAIVTPQVKQEH 244
Query: 928 VPSRSGLPHMHSQLEHRPSQRSSSP 952
+ S L H+ Q E R Q P
Sbjct: 245 PHTDSDLMHVKPQHEQRKEQEPKRP 269
>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
sapiens]
Length = 371
Score = 42.7 bits (99), Expect = 0.002
Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 26/145 (17%)
Query: 817 VPMVRPAHQLHP-----GLVQRMLAQGVHPQHLPSLLQT----GVLPPGMDLSHLQGISG 867
VP+V+P+H +HP + G HP H+PS + + PP D+ +S
Sbjct: 142 VPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSP 201
Query: 868 PILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQN 927
+GQ PL SH ++ PG H G H A V+ Q ++
Sbjct: 202 GGVGQITPPLGWFSHHMIPGPPGP----------------HTTGI-PHPAIVTPQVKQEH 244
Query: 928 VPSRSGLPHMHSQLEHRPSQRSSSP 952
+ S L H+ Q E R Q P
Sbjct: 245 PHTDSDLMHVKPQHEQRKEQEPKRP 269
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 42.4 bits (98), Expect = 0.002
Identities = 75/304 (24%), Positives = 103/304 (33%), Gaps = 57/304 (18%)
Query: 670 SPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKED 729
SP HR SP+ S S + TP V K PA+GK G K
Sbjct: 838 SPEKSHR--VISPSSGYSSQSNTPTALTPVPVFLKSVS--------PANGK---GKPKPK 884
Query: 730 TQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATG 789
+ + +L+SS S+ S+ S +T+++ S + A G
Sbjct: 885 VPER-KSSLISSVSISSSSTSLSSSTSTEGSGTMKKL------------------DPAVG 925
Query: 790 RKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQ 849
PVP+ PF P + P +P P V Q P + V P P L
Sbjct: 926 SPPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSP-----LPHSPVFPPPPPEALI 980
Query: 850 TGVLPPGMDLSHLQGISGPIL--GQPFYPLPAASHPLLNPRPGTPLHLAMV--------- 898
PP LS + PIL PLP P P P PL +
Sbjct: 981 PFCSPPDWCLSPPRPALSPILPDSPVSLPLPPPLLPSSEPPPAPPLDPKFMKDTRPPFTN 1040
Query: 899 --QQQLQRSVLHPPGSGSHAA--AVSVQTTP-----QNVPSRSGLPHMHSQLEHRPSQRS 949
Q + R L PP + + + + TT Q P R +QL R +Q
Sbjct: 1041 SGQPESSRGSLRPPSTKEETSRPPMPLITTEALQMVQLRPVRKNSGAEAAQLSERTAQEQ 1100
Query: 950 SSPV 953
+PV
Sbjct: 1101 RTPV 1104
>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
sapiens]
Length = 399
Score = 42.4 bits (98), Expect = 0.002
Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 26/159 (16%)
Query: 817 VPMVRPAHQLHP-----GLVQRMLAQGVHPQHLPSLLQT----GVLPPGMDLSHLQGIS- 866
VP+V+P+H +HP + G HP H+PS + + PP D+ +S
Sbjct: 142 VPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSP 201
Query: 867 ---GPIL------GQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGS--- 914
G I GQP YP+ P P + + + + PPG +
Sbjct: 202 GGVGQITPPLGWQGQPVYPITGG---FRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGI 258
Query: 915 -HAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSP 952
H A V+ Q ++ + S L H+ Q E R Q P
Sbjct: 259 PHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRP 297
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 42.4 bits (98), Expect = 0.002
Identities = 77/325 (23%), Positives = 116/325 (35%), Gaps = 37/325 (11%)
Query: 667 VTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDS 726
V P+ V S P+P + + S+LS +P S + S P S L D
Sbjct: 156 VPSPPSDVPSPPSDVPSPPSDVPSLLSGVPSPPSDV----PSPPSDVPSPPSDVPLLSDV 211
Query: 727 KEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPK 786
S+ LLS P +D S P+ LS + P + + D P
Sbjct: 212 PSPP---SDVPLLSDVPSPPSDVPSLPSDVPSLSGVPSPPSDVPSLLSGVPSPPSDISPP 268
Query: 787 ATGRKTPTLASPVPTTP---------FLRPVHQVP-LVPHVPMVRPAHQLHPGLVQRMLA 836
+ P+L S VP+ P P VP L+ VP P + +
Sbjct: 269 SD---VPSLLSDVPSLPSDVPSLLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSDIPLLSG 325
Query: 837 QGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFY---PLPAASHP--LLNPRPGT 891
P +PS PP D+ L G+ P+ P P P + P L++P
Sbjct: 326 VPSPPSDVPSPPSDVPSPPS-DVPLLSGVPSPLSDVPLLSGVPSPPSDVPSLLMSPHRLL 384
Query: 892 PLHLAMVQQQ---LQRSVLHPPG--SGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPS 946
H ++V + + P SG ++ V + P VP SG+P + S +
Sbjct: 385 MSHYSLVSPHRLDVPSLLSDVPSLLSGVPSSPSGVPSLPSGVPILSGVPSLPSGVP---- 440
Query: 947 QRSSSPVGLAKWFGSDVLQQPLPSM 971
S S V + W L PL ++
Sbjct: 441 --SPSGVPITLWCPLTTLWCPLSTL 463
Score = 39.3 bits (90), Expect = 0.018
Identities = 54/180 (30%), Positives = 71/180 (39%), Gaps = 38/180 (21%)
Query: 809 HQVPLVPHVPMVRPAH---QLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGI 865
H + PH P+V P H LH LV V P H P + L H
Sbjct: 13 HYSVVSPHCPLVPPHHPLVSLHHPLVSPHFPL-VSPHH-----------PLVSLHH---- 56
Query: 866 SGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVS----- 920
P+ P +PL + HPL++P H ++V Q H P H + VS
Sbjct: 57 --PV--SPHFPLVSPHHPLMSP------HYSLVSPQYSPVSPHCPLVSPHYSLVSPHRPL 106
Query: 921 VQTTPQNVPS-RSGLPHMHSQLEHRPSQRSSSPVGLAKWFGSDV--LQQPLPSMPAKVIS 977
V VPS S +P + S + PS SS P + SDV L +PS P+ V S
Sbjct: 107 VSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLL-SDVPSLLSGVPSPPSDVPS 165
Score = 37.7 bits (86), Expect = 0.053
Identities = 50/189 (26%), Positives = 73/189 (38%), Gaps = 23/189 (12%)
Query: 800 PTTPFLRPVHQV-----PLVPHVPMVRPAHQL---HPGLVQRMLAQGVHPQHLPSLLQTG 851
P P + P H + P+ PH P+V P H L H LV PQ+ P
Sbjct: 40 PHFPLVSPHHPLVSLHHPVSPHFPLVSPHHPLMSPHYSLVS--------PQYSPVSPHCP 91
Query: 852 VLPPGMDL--SHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHP 909
++ P L H +S + G P P S LL+ P P ++ + +
Sbjct: 92 LVSPHYSLVSPHRPLVSPLLSGVPSPPSDVPS--LLSGVPSLPSDVSSPPSDVPSLLSDV 149
Query: 910 PG--SGSHAAAVSVQTTPQNVPS-RSGLPHMHSQLEHRPSQRSSSPVGLAKWFGSDVLQQ 966
P SG + V + P +VPS S +P + S + PS S P + L
Sbjct: 150 PSLLSGVPSPPSDVPSPPSDVPSPPSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPLLS 209
Query: 967 PLPSMPAKV 975
+PS P+ V
Sbjct: 210 DVPSPPSDV 218
Score = 37.7 bits (86), Expect = 0.053
Identities = 69/266 (25%), Positives = 98/266 (36%), Gaps = 44/266 (16%)
Query: 742 SSVPSADRD-SSPTTN---------SKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRK 791
S VPS D SSP ++ S LS + P ++ + D +G
Sbjct: 126 SGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPSLLSGVP 185
Query: 792 TPTLASPVPTTPFLRPVHQVPLVPHVP-----------MVRPAHQLH--PGLVQRMLAQG 838
+P P P + P VPL+ VP + P + P V +
Sbjct: 186 SPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPSDVPSLSGVP 245
Query: 839 VHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMV 898
P +PSLL +GV P D+S + P L LP+ LL+ P P +
Sbjct: 246 SPPSDVPSLL-SGVPSPPSDISPPSDV--PSLLSDVPSLPSDVPSLLSGVPSPPSDV--- 299
Query: 899 QQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLAKW 958
L V PP V + P ++P SG+P S + PS S P +
Sbjct: 300 -PSLLSDVPSPPS--------DVPSPPSDIPLLSGVPSPPSDVPSPPSDVPSPPSDVPLL 350
Query: 959 FG-----SDV-LQQPLPSMPAKVISV 978
G SDV L +PS P+ V S+
Sbjct: 351 SGVPSPLSDVPLLSGVPSPPSDVPSL 376
Score = 37.4 bits (85), Expect = 0.070
Identities = 59/223 (26%), Positives = 84/223 (37%), Gaps = 45/223 (20%)
Query: 800 PTTPFLRPVHQV------PLVPHVPMVRPAHQL---HPGLVQRMLAQGVH--PQHLPSLL 848
P P + P + + P+ PH P+V P + L H LV +L+ GV P +PSLL
Sbjct: 67 PHHPLMSPHYSLVSPQYSPVSPHCPLVSPHYSLVSPHRPLVSPLLS-GVPSPPSDVPSLL 125
Query: 849 Q------TGVLPPGMDL--------SHLQGISGPILGQPFYPLPAASHP-----LLNPRP 889
+ V P D+ S L G+ P P P S P LL+ P
Sbjct: 126 SGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPSLLSGVP 185
Query: 890 GTPLHLAMVQQQ---------LQRSVLHPPG-----SGSHAAAVSVQTTPQNVPSRSGLP 935
P + L V PP S + V + P +VPS SG+P
Sbjct: 186 SPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPSDVPSLSGVP 245
Query: 936 HMHSQLEHRPSQRSSSPVGLAKWFGSDVLQQPLPSMPAKVISV 978
S + S S P ++ L +PS+P+ V S+
Sbjct: 246 SPPSDVPSLLSGVPSPPSDISPPSDVPSLLSDVPSLPSDVPSL 288
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 42.0 bits (97), Expect = 0.003
Identities = 63/279 (22%), Positives = 95/279 (34%), Gaps = 33/279 (11%)
Query: 723 LGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQD 782
L D K+ ++ E L+ S S + P T++ LS Q + + ++ + K Q
Sbjct: 163 LRDLKQGHVRSLSERLMQMSLATSGVKAHPPVTSAPLSPPQPNDLYKNPTSSSEFYKAQG 222
Query: 783 YRPKATGRKTPTLASPVPTTPFL-RPVHQVPLVPHVP-MVRPAHQLH-PGLVQRMLAQGV 839
P K P P PF P V P P H+L+ PG + L +
Sbjct: 223 PLPNQHSLKGMEHRGPPPEYPFKGMPPQSVVCKPQEPGHFYSEHRLNQPGRTEGQLMRYQ 282
Query: 840 HPQHLPSLLQTGVLPPGMDL----------------SHLQGISGPIL-GQPFYPLPAASH 882
HP + G P D+ S G S P+L P L A H
Sbjct: 283 HPP------EYGAARPAQDISLPLSARNSQPHSPTSSLTSGGSLPLLQSPPSTRLSPARH 336
Query: 883 PLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLE 942
PL+ + HL QQ + H G H + Q + H H +
Sbjct: 337 PLVPNQGDHSAHLPRPQQHFLPNQAH---QGDHYRLSQPGLSQQQQQQQQQHHHHHHHQQ 393
Query: 943 HRPSQRSSSP----VGLAKWFGSDVLQQPLPSMPAKVIS 977
+ Q P + + S QP+P+ P ++S
Sbjct: 394 QQQQQPQQQPGEAYSAMPRAQPSSASYQPVPADPFAIVS 432
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 41.6 bits (96), Expect = 0.004
Identities = 42/166 (25%), Positives = 62/166 (37%), Gaps = 17/166 (10%)
Query: 651 PQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSP--SFTPTSVIRKMY-- 706
P VD G N +VT + N S +P + ++P S P S K
Sbjct: 83 PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSL 142
Query: 707 ----ESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSAL 762
E+ ++KE + K D KE T A E + +S +D +PT+
Sbjct: 143 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSA----KDLAPTSKVLAKPT 198
Query: 763 QRSSCST---PLSQANRYTKEQDYRPKATGRK--TPTLASPVPTTP 803
++ +T L+ T P +T K TPT PTTP
Sbjct: 199 PKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTP 244
Score = 33.9 bits (76), Expect = 0.77
Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 13/140 (9%)
Query: 669 KSPAPVHRGNSSSPAPAASI-TSMLSPSFTPTSVIRKMYESKEKSKEEPA---SGKAALG 724
K P P +S P T++ S TP +S + +EPA + + A
Sbjct: 214 KEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT 273
Query: 725 DSKEDTQKASEENL-LSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDY 783
KE ++E ++ S P+ ++ +PTT K + +TP A KE
Sbjct: 274 TPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAP------TTPKEPAPTTPKEPT- 326
Query: 784 RPKATGRKTPTLASPVPTTP 803
P PT P PTTP
Sbjct: 327 -PTTPKEPAPTTKEPAPTTP 345
Score = 33.1 bits (74), Expect = 1.3
Identities = 92/481 (19%), Positives = 164/481 (34%), Gaps = 55/481 (11%)
Query: 376 GQNSGNYFAPIPLEDHAE-NKVDILEMLQKAK-VDLKPLLSSLSANKEKLKESS---HSG 430
G ++G++ P + NKV + AK ++ +P SL N + KE+S +
Sbjct: 91 GLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRP---SLPPNSDTSKETSLTVNKE 147
Query: 431 VVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGDMTAFNKLVS- 489
+ +E K D + K ++ + +E+T + D+ +K+++
Sbjct: 148 TTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-----------DLAPTSKVLAK 196
Query: 490 -TMKASGTLPSQPKVSRNLESHLMSPAE----IPGQPVPKNILQELLGQPVQRPASSNLL 544
T KA T P ++ E +P E P +P P I + + PA +
Sbjct: 197 PTPKAETTTKG-PALTTPKEPTPTTPKEPASTTPKEPTPTTI--KSAPTTPKEPAPTTTK 253
Query: 545 SGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLR------PRIPSPIGFTPGPQQL 598
S EP + + AP+ P T A P+ P+P
Sbjct: 254 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT 313
Query: 599 LGDPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRD 658
+P K +P T + ++ A P A + P P +
Sbjct: 314 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 373
Query: 659 GFRNRQQRVT--KSPAPVHRGNSSS----PAPAASITSMLSPSFTPTSVIRKMYESKEKS 712
++ T K PAP ++ + PAP + ++ +P + ++ + K
Sbjct: 374 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 433
Query: 713 KEEPASGKAALGDSKEDTQKASEENLLSSSS----------VPSADRDSSPTTNSKLSAL 762
K A KE +E +++ P+ ++++PTT KL+
Sbjct: 434 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPT 493
Query: 763 QRSSCSTPLSQANRYTKEQDYRPKATGRKTPTL-ASPVPTTPFL----RPVHQVPLVPHV 817
+ + T ++ P TPT P PTTP P P P
Sbjct: 494 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 553
Query: 818 P 818
P
Sbjct: 554 P 554
Score = 30.4 bits (67), Expect = 8.5
Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 44/268 (16%)
Query: 668 TKSPAPVHRGN-------SSSPAPAASITSMLSPSF----TPTSVIRKMYES-KEKSKEE 715
TK P +H+ S+ P P A S P TP + +M + K+K+ E
Sbjct: 729 TKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 788
Query: 716 -----PASGKAALGDSKED---TQKASEENLLSSSS--VPSADRDSSP---------TTN 756
P + AA +KE T+K +E + ++++ + +D++P T
Sbjct: 789 DLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLA 848
Query: 757 SKLSALQRSSCSTPLSQANRYT---KEQDYRPKAT---------GRKTPTLASPVPTTPF 804
K++ +++ +T + T K++ KAT K PT T P
Sbjct: 849 PKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPR 908
Query: 805 LRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQG 864
+R P + P + + ML P P+ V P D +G
Sbjct: 909 VRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEG 968
Query: 865 ISGPILGQPFYPLPAASHPLLNPRPGTP 892
+ +L +P +P + P ++ P P
Sbjct: 969 ETPHMLLRPHVFMPEVT-PDMDYLPRVP 995
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 41.6 bits (96), Expect = 0.004
Identities = 42/166 (25%), Positives = 62/166 (37%), Gaps = 17/166 (10%)
Query: 651 PQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSP--SFTPTSVIRKMY-- 706
P VD G N +VT + N S +P + ++P S P S K
Sbjct: 124 PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSL 183
Query: 707 ----ESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSAL 762
E+ ++KE + K D KE T A E + +S +D +PT+
Sbjct: 184 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSA----KDLAPTSKVLAKPT 239
Query: 763 QRSSCST---PLSQANRYTKEQDYRPKATGRK--TPTLASPVPTTP 803
++ +T L+ T P +T K TPT PTTP
Sbjct: 240 PKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTP 285
Score = 33.9 bits (76), Expect = 0.77
Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 13/140 (9%)
Query: 669 KSPAPVHRGNSSSPAPAASI-TSMLSPSFTPTSVIRKMYESKEKSKEEPA---SGKAALG 724
K P P +S P T++ S TP +S + +EPA + + A
Sbjct: 255 KEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT 314
Query: 725 DSKEDTQKASEENL-LSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDY 783
KE ++E ++ S P+ ++ +PTT K + +TP A KE
Sbjct: 315 TPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAP------TTPKEPAPTTPKEPT- 367
Query: 784 RPKATGRKTPTLASPVPTTP 803
P PT P PTTP
Sbjct: 368 -PTTPKEPAPTTKEPAPTTP 386
Score = 33.1 bits (74), Expect = 1.3
Identities = 92/481 (19%), Positives = 164/481 (34%), Gaps = 55/481 (11%)
Query: 376 GQNSGNYFAPIPLEDHAE-NKVDILEMLQKAK-VDLKPLLSSLSANKEKLKESS---HSG 430
G ++G++ P + NKV + AK ++ +P SL N + KE+S +
Sbjct: 132 GLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRP---SLPPNSDTSKETSLTVNKE 188
Query: 431 VVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGDMTAFNKLVS- 489
+ +E K D + K ++ + +E+T + D+ +K+++
Sbjct: 189 TTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-----------DLAPTSKVLAK 237
Query: 490 -TMKASGTLPSQPKVSRNLESHLMSPAE----IPGQPVPKNILQELLGQPVQRPASSNLL 544
T KA T P ++ E +P E P +P P I + + PA +
Sbjct: 238 PTPKAETTTKG-PALTTPKEPTPTTPKEPASTTPKEPTPTTI--KSAPTTPKEPAPTTTK 294
Query: 545 SGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLR------PRIPSPIGFTPGPQQL 598
S EP + + AP+ P T A P+ P+P
Sbjct: 295 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT 354
Query: 599 LGDPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRD 658
+P K +P T + ++ A P A + P P +
Sbjct: 355 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 414
Query: 659 GFRNRQQRVT--KSPAPVHRGNSSS----PAPAASITSMLSPSFTPTSVIRKMYESKEKS 712
++ T K PAP ++ + PAP + ++ +P + ++ + K
Sbjct: 415 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 474
Query: 713 KEEPASGKAALGDSKEDTQKASEENLLSSSS----------VPSADRDSSPTTNSKLSAL 762
K A KE +E +++ P+ ++++PTT KL+
Sbjct: 475 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPT 534
Query: 763 QRSSCSTPLSQANRYTKEQDYRPKATGRKTPTL-ASPVPTTPFL----RPVHQVPLVPHV 817
+ + T ++ P TPT P PTTP P P P
Sbjct: 535 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 594
Query: 818 P 818
P
Sbjct: 595 P 595
Score = 30.4 bits (67), Expect = 8.5
Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 44/268 (16%)
Query: 668 TKSPAPVHRGN-------SSSPAPAASITSMLSPSF----TPTSVIRKMYES-KEKSKEE 715
TK P +H+ S+ P P A S P TP + +M + K+K+ E
Sbjct: 770 TKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 829
Query: 716 -----PASGKAALGDSKED---TQKASEENLLSSSS--VPSADRDSSP---------TTN 756
P + AA +KE T+K +E + ++++ + +D++P T
Sbjct: 830 DLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLA 889
Query: 757 SKLSALQRSSCSTPLSQANRYT---KEQDYRPKAT---------GRKTPTLASPVPTTPF 804
K++ +++ +T + T K++ KAT K PT T P
Sbjct: 890 PKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPR 949
Query: 805 LRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQG 864
+R P + P + + ML P P+ V P D +G
Sbjct: 950 VRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEG 1009
Query: 865 ISGPILGQPFYPLPAASHPLLNPRPGTP 892
+ +L +P +P + P ++ P P
Sbjct: 1010 ETPHMLLRPHVFMPEVT-PDMDYLPRVP 1036
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 41.6 bits (96), Expect = 0.004
Identities = 42/166 (25%), Positives = 62/166 (37%), Gaps = 17/166 (10%)
Query: 651 PQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSP--SFTPTSVIRKMY-- 706
P VD G N +VT + N S +P + ++P S P S K
Sbjct: 176 PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSL 235
Query: 707 ----ESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSAL 762
E+ ++KE + K D KE T A E + +S +D +PT+
Sbjct: 236 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSA----KDLAPTSKVLAKPT 291
Query: 763 QRSSCST---PLSQANRYTKEQDYRPKATGRK--TPTLASPVPTTP 803
++ +T L+ T P +T K TPT PTTP
Sbjct: 292 PKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTP 337
Score = 34.3 bits (77), Expect = 0.59
Identities = 107/551 (19%), Positives = 188/551 (34%), Gaps = 70/551 (12%)
Query: 324 EDVLGEGSVSASRFSRWFSNPSRSGSR----SSSLGSTPHEELERLAGLEQAILSPGQNS 379
E++ E SVS ++ S S+ S S S SS S + EL++ ++ + +
Sbjct: 111 EEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKK 170
Query: 380 GNYFAPIPLE-----DHAENKVDILEM--LQKAKVDLKPLLS---------SLSANKEKL 423
P+ E D+ + KV + Q KV P ++ SL N +
Sbjct: 171 PTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTS 230
Query: 424 KESS---HSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGD 480
KE+S + + +E K D + K ++ + +E+T + D
Sbjct: 231 KETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-----------D 279
Query: 481 MTAFNKLVS--TMKASGTLPSQPKVSRNLESHLMSPAE----IPGQPVPKNILQELLGQP 534
+ +K+++ T KA T P ++ E +P E P +P P I +
Sbjct: 280 LAPTSKVLAKPTPKAETTTKG-PALTTPKEPTPTTPKEPASTTPKEPTPTTI--KSAPTT 336
Query: 535 VQRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLR------PRIPSP 588
+ PA + S EP + + AP+ P T A P+ P+P
Sbjct: 337 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAP 396
Query: 589 IGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGF 648
+P K +P T + ++ A P A + P
Sbjct: 397 TTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE 456
Query: 649 GKPQVDRTRDGFRNRQQRVT--KSPAPVHRGNSSS----PAPAASITSMLSPSFTPTSVI 702
P + ++ T K PAP ++ + PAP + ++ +P +
Sbjct: 457 PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 516
Query: 703 RKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSS----------VPSADRDSS 752
++ + K K A KE +E +++ P+ ++++
Sbjct: 517 KEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA 576
Query: 753 PTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTL-ASPVPTTPFL----RP 807
PTT KL+ + + T ++ P TPT P PTTP P
Sbjct: 577 PTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTP 636
Query: 808 VHQVPLVPHVP 818
P P P
Sbjct: 637 KEPAPTTPKEP 647
Score = 30.4 bits (67), Expect = 8.5
Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 44/268 (16%)
Query: 668 TKSPAPVHRGN-------SSSPAPAASITSMLSPSF----TPTSVIRKMYES-KEKSKEE 715
TK P +H+ S+ P P A S P TP + +M + K+K+ E
Sbjct: 822 TKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 881
Query: 716 -----PASGKAALGDSKED---TQKASEENLLSSSS--VPSADRDSSP---------TTN 756
P + AA +KE T+K +E + ++++ + +D++P T
Sbjct: 882 DLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLA 941
Query: 757 SKLSALQRSSCSTPLSQANRYT---KEQDYRPKAT---------GRKTPTLASPVPTTPF 804
K++ +++ +T + T K++ KAT K PT T P
Sbjct: 942 PKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPR 1001
Query: 805 LRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQG 864
+R P + P + + ML P P+ V P D +G
Sbjct: 1002 VRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEG 1061
Query: 865 ISGPILGQPFYPLPAASHPLLNPRPGTP 892
+ +L +P +P + P ++ P P
Sbjct: 1062 ETPHMLLRPHVFMPEVT-PDMDYLPRVP 1088
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 41.6 bits (96), Expect = 0.004
Identities = 42/166 (25%), Positives = 62/166 (37%), Gaps = 17/166 (10%)
Query: 651 PQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSP--SFTPTSVIRKMY-- 706
P VD G N +VT + N S +P + ++P S P S K
Sbjct: 217 PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSL 276
Query: 707 ----ESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSAL 762
E+ ++KE + K D KE T A E + +S +D +PT+
Sbjct: 277 TVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSA----KDLAPTSKVLAKPT 332
Query: 763 QRSSCST---PLSQANRYTKEQDYRPKATGRK--TPTLASPVPTTP 803
++ +T L+ T P +T K TPT PTTP
Sbjct: 333 PKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTP 378
Score = 34.3 bits (77), Expect = 0.59
Identities = 107/551 (19%), Positives = 188/551 (34%), Gaps = 70/551 (12%)
Query: 324 EDVLGEGSVSASRFSRWFSNPSRSGSR----SSSLGSTPHEELERLAGLEQAILSPGQNS 379
E++ E SVS ++ S S+ S S S SS S + EL++ ++ + +
Sbjct: 152 EEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKK 211
Query: 380 GNYFAPIPLE-----DHAENKVDILEM--LQKAKVDLKPLLS---------SLSANKEKL 423
P+ E D+ + KV + Q KV P ++ SL N +
Sbjct: 212 PTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTS 271
Query: 424 KESS---HSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLEETLSAVTNNRQLKKDGD 480
KE+S + + +E K D + K ++ + +E+T + D
Sbjct: 272 KETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-----------D 320
Query: 481 MTAFNKLVS--TMKASGTLPSQPKVSRNLESHLMSPAE----IPGQPVPKNILQELLGQP 534
+ +K+++ T KA T P ++ E +P E P +P P I +
Sbjct: 321 LAPTSKVLAKPTPKAETTTKG-PALTTPKEPTPTTPKEPASTTPKEPTPTTI--KSAPTT 377
Query: 535 VQRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLR------PRIPSP 588
+ PA + S EP + + AP+ P T A P+ P+P
Sbjct: 378 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAP 437
Query: 589 IGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGF 648
+P K +P T + ++ A P A + P
Sbjct: 438 TTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKE 497
Query: 649 GKPQVDRTRDGFRNRQQRVT--KSPAPVHRGNSSS----PAPAASITSMLSPSFTPTSVI 702
P + ++ T K PAP ++ + PAP + ++ +P +
Sbjct: 498 PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 557
Query: 703 RKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSS----------VPSADRDSS 752
++ + K K A KE +E +++ P+ ++++
Sbjct: 558 KEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA 617
Query: 753 PTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTL-ASPVPTTPFL----RP 807
PTT KL+ + + T ++ P TPT P PTTP P
Sbjct: 618 PTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTP 677
Query: 808 VHQVPLVPHVP 818
P P P
Sbjct: 678 KEPAPTTPKEP 688
Score = 30.4 bits (67), Expect = 8.5
Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 44/268 (16%)
Query: 668 TKSPAPVHRGN-------SSSPAPAASITSMLSPSF----TPTSVIRKMYES-KEKSKEE 715
TK P +H+ S+ P P A S P TP + +M + K+K+ E
Sbjct: 863 TKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 922
Query: 716 -----PASGKAALGDSKED---TQKASEENLLSSSS--VPSADRDSSP---------TTN 756
P + AA +KE T+K +E + ++++ + +D++P T
Sbjct: 923 DLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLA 982
Query: 757 SKLSALQRSSCSTPLSQANRYT---KEQDYRPKAT---------GRKTPTLASPVPTTPF 804
K++ +++ +T + T K++ KAT K PT T P
Sbjct: 983 PKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPR 1042
Query: 805 LRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQG 864
+R P + P + + ML P P+ V P D +G
Sbjct: 1043 VRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAEG 1102
Query: 865 ISGPILGQPFYPLPAASHPLLNPRPGTP 892
+ +L +P +P + P ++ P P
Sbjct: 1103 ETPHMLLRPHVFMPEVT-PDMDYLPRVP 1129
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 41.6 bits (96), Expect = 0.004
Identities = 105/457 (22%), Positives = 158/457 (34%), Gaps = 70/457 (15%)
Query: 513 SPAEIPGQPVPKNIL----QELLGQPVQRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLS 568
SP +P P P + +E P++R +L+ +G+ P LS
Sbjct: 132 SPELLPRSPKPSGLQRLAPEEATALPLRRLCHLSLMEKDLGTTAHPRGF-------PELS 184
Query: 569 QVFQTRAASADYLRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLEL-QQAAL 627
T AAS+ RPR+ S + P+ L G + P + ++S L L +AA
Sbjct: 185 HK-STAAASSRQSRPRVRSA---SLPPRTRLPS---GSQAPSAAHPKRLSDLLLTSRAAA 237
Query: 628 EGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAAS 687
G P + AA P G + T + Q R+T P S SP P
Sbjct: 238 PGWRSPDPRSRLAA----PPLGSTTLPST---WTAPQSRLTARP-------SRSPEPQIR 283
Query: 688 ITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSA 747
+ P K + ++ P G L + + L +
Sbjct: 284 ESEQRDPQLRRKQQRWKEPLMPRREEKYPLRGTDPLPPGQPQRIPLPGQPLQPQPILTPG 343
Query: 748 DRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDY----RPKATGRKTPTLASPVPTTP 803
PT L S P+ + Q RP T + PT P+ P
Sbjct: 344 QPQKIPTPGQHQPILTPGH-SQPIPTPGQPLPPQPIPTPGRP-LTPQPIPTPGRPLTPQP 401
Query: 804 FLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQ 863
P + L P + ++RP + P L Q Q LP L +LPPG S
Sbjct: 402 IQMPGRPLRLPPPLRLLRPGQPMSPQLRQ--------TQGLP--LPQPLLPPGQPKS--- 448
Query: 864 GISGPILGQPFYPLP------AASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAA 917
G+P PLP + S P P P + L + +++ L R P G+ AA
Sbjct: 449 ------AGRPLQPLPPGPDARSISDP---PAPRSRLPIRLLRGLLARL---PGGASPRAA 496
Query: 918 AVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVG 954
A + TT + P+ + P S P + +G
Sbjct: 497 AAAACTTMKGWPAATMTPAETSPTMGPPDASAGFSIG 533
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.6 bits (96), Expect = 0.004
Identities = 76/346 (21%), Positives = 113/346 (32%), Gaps = 69/346 (19%)
Query: 663 RQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAA 722
R+ R K PAP P S+ S S +PT +K + K++ + +S
Sbjct: 155 RRAREAKQPAP-------EPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSP-- 205
Query: 723 LGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSAL----QRSSCSTPLSQANRYT 778
+ + +K+S++ S S + SPT SK + +RS +TP ++ R
Sbjct: 206 ----RRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAH 261
Query: 779 KEQDY-----------RPKATGRKTPTLA----SPVPTT--------PFLRP---VHQVP 812
+ R ++ KT T A SP P + PF P Q P
Sbjct: 262 RSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRP 321
Query: 813 LVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMD--LSHLQGISG--- 867
P +P+ + P P TG PP L+ G S
Sbjct: 322 SSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPL 381
Query: 868 ---PILGQPFYP------------------LPAASHPLLNPRPGTPLHLAMVQQQLQRSV 906
P+ +P P LP +S +P P ++ S
Sbjct: 382 ATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESP 441
Query: 907 LHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSP 952
P GSH S T+ R+ HS R RS SP
Sbjct: 442 KPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSP 487
Score = 40.0 bits (92), Expect = 0.011
Identities = 126/574 (21%), Positives = 202/574 (35%), Gaps = 119/574 (20%)
Query: 273 EEDEVEVI-LAQEPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKVPCLASMIEDVLGEGS 331
+E+ +EV+ ++EPA + L E S +F+ + +++ P ++ ++ + S
Sbjct: 1235 DEELMEVVEKSEEPAGQILSHLSSELKEMSTSNFESSP--EVEERPAVSLTLDQSQSQAS 1292
Query: 332 VSASRFSRWFSNPSRSGSRSSSLGSTPHEELERLAGLEQAILSPGQ--NSGNYFAPIPLE 389
+ A PS + S S H+EL E + SP + NSG P+ E
Sbjct: 1293 LEAVEV------PSMASSWGGPHFSPEHKELSNSPLRENSFGSPLEFRNSG----PLGTE 1342
Query: 390 DHAENKVDILEMLQKAKVDLKPLLSSLSANKEKLKESSHSGVVLSVEEVEAGLKGLKVDQ 449
+ ++ E L ++ SL ++ + S HS LS + VE G+ +Q
Sbjct: 1343 MNTGFSSEVKEDLNGPFLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKA--GMSSNQ 1400
Query: 450 QVKN------------------STPFMAEHLEETLSAVTNNRQLK--KDGDMTAFNKLVS 489
+ + S+P M + L T S + + +DG T S
Sbjct: 1401 SISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTP-----S 1455
Query: 490 TMKASGTLPSQPKVSRNLESHLMSPAEIPGQPVPKNILQELLGQPVQRPASSNLLSGLMG 549
SG+ P + R +E P PK + Q +P R SS L+
Sbjct: 1456 RHSLSGSSPGMKDIPRTPSR---GRSECDSSPEPKALPQT--PRPRSRSPSSPELNN--- 1507
Query: 550 SLEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGPQQLL-----GDPFQ 604
L QR S S V Q A R P G Q L P +
Sbjct: 1508 -----KCLTPQRERSGSESSVDQKTVA-------RTPLGQRSRSGSSQELDVKPSASPQE 1555
Query: 605 GMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVD--------RT 656
SP + ++ L+Q + G P+VD R+
Sbjct: 1556 RSESDSSPDSKAKTRTPLRQRSRSG-------------------SSPEVDSKSRLSPRRS 1596
Query: 657 RDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEP 716
R G + ++ G+ SSP P A +P P R S K +
Sbjct: 1597 RSGSSPEVKDKPRAAPRAQSGSDSSPEPKAP-----APRALPR---RSRSGSSSKGRGPS 1648
Query: 717 ASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTP------ 770
G ++ S E K+ S SS P T S+ +RSS S+P
Sbjct: 1649 PEGSSSTESSPEHPPKSRTARRGSRSS-------PEPKTKSRTPPRRRSSRSSPELTRKA 1701
Query: 771 -LSQANR---YTKEQDYRPKATGRKTPTLASPVP 800
LS+ +R + E R R++P+++SP P
Sbjct: 1702 RLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEP 1735
Score = 38.5 bits (88), Expect = 0.031
Identities = 58/255 (22%), Positives = 89/255 (34%), Gaps = 15/255 (5%)
Query: 494 SGTLPSQPKVSRNLESHLMSPAEIPGQPVPKNILQELLGQPVQRPASSNLLSGLMGSLEP 553
S T PS P SR SP+ GQ +++L QP + P S +
Sbjct: 2407 SRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQP-RSPVPSAFSDQSRCLIAQ 2465
Query: 554 TTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPG-PQQLLGDPFQGMRKPMSP 612
TT + G ++ S S T +SA + P PG P +G+P P S
Sbjct: 2466 TTPVAGSQSLS---SGAVATTTSSAGDHNGMLSVP---APGVPHSDVGEP------PAST 2513
Query: 613 ITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRVTKSP- 671
Q S L Q A E + + +++ + + P
Sbjct: 2514 GAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPE 2573
Query: 672 APVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQ 731
+ R S +PAP ++ P TP R+ S S +S ++ S +
Sbjct: 2574 VALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSS 2633
Query: 732 KASEENLLSSSSVPS 746
+S + SSSS S
Sbjct: 2634 SSSSSSSSSSSSSSS 2648
Score = 33.1 bits (74), Expect = 1.3
Identities = 68/304 (22%), Positives = 101/304 (33%), Gaps = 43/304 (14%)
Query: 669 KSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKE 728
KS P R S S P A S TP + +S P + + S++
Sbjct: 789 KSQTPPRRSRSGSSQPKAK-------SRTPPR--------RSRSSSSPPPKQKSKTPSRQ 833
Query: 729 DTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSC--STPLSQANRYTKEQDYRPK 786
+S + S + P +SP N + QR SC S+P + T R
Sbjct: 834 SHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPS---RHS 890
Query: 787 ATGRKTPTLASPVPTTPFLRPVHQVPLVPHV-PMVRPAHQLHPGLVQRMLAQGVHPQHLP 845
+G P + S P P P P V ++ P + H G P
Sbjct: 891 CSGSSPPRVKSSTP--PRQSPSRSSSPQPKVKAIISPRQRSHSG----------SSSPSP 938
Query: 846 SLLQTGVLP-PGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTP---LHLAMVQQQ 901
S + + P +S + +L P Y +S P +P TP H +
Sbjct: 939 SRVTSRTTPRRSRSVSPCSNVESRLL--PRYSHSGSSSPDTKVKPETPPRQSHSGSISPY 996
Query: 902 LQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLAKWFGS 961
+ PPG + + S PQ S + L +SS+P G +FG
Sbjct: 997 PKVKAQTPPGP---SLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPG-ESYFGV 1052
Query: 962 DVLQ 965
LQ
Sbjct: 1053 SSLQ 1056
Score = 33.1 bits (74), Expect = 1.3
Identities = 64/288 (22%), Positives = 106/288 (36%), Gaps = 32/288 (11%)
Query: 536 QRPASSNLLSGLMGSLEPTTSLLGQR-----APSPPLSQVFQTRAASADYLRPRIPSPI- 589
Q PAS+NL+ ++ G R AP+ S + A+ PR+P
Sbjct: 2331 QAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAY 2390
Query: 590 ----GFTPGPQQLLGDPFQGMRKPMSPITAQM-SQLELQQAALEGLALPHDLAVQAANFY 644
G T P L D + P +P ++M S+ ++ G A L A +
Sbjct: 2391 ERVSGRTSPP---LLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQD-- 2445
Query: 645 QPGFGKPQV--DRTR------------DGFRNRQQRVTKSPAPVHRGNSSSPAPAASITS 690
QP P D++R + T S A H G S PAP +
Sbjct: 2446 QPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSD 2505
Query: 691 MLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRD 750
+ P + + + + +KE +S ++ S + +S + SSS S+D +
Sbjct: 2506 VGEPPASTGAQQPSALAALQPAKERRSSSSSS-SSSSSSSSSSSSSSSSSSSGSSSSDSE 2564
Query: 751 SSPTTNSKLSALQRSSCSTPL-SQANRYTKEQDYRPKATGRKTPTLAS 797
S AL+R TP +A R + + P R++ + +S
Sbjct: 2565 GSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSS 2612
Score = 30.4 bits (67), Expect = 8.5
Identities = 69/350 (19%), Positives = 120/350 (34%), Gaps = 40/350 (11%)
Query: 346 RSGSRSSSLGSTPHEELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILEMLQKA 405
R+ S SS +G P Q++L P Q+ P D + + Q
Sbjct: 2423 RAPSPSSRMGQAP----------SQSLLPPAQDQPRSPVPSAFSDQSRCLI-----AQTT 2467
Query: 406 KVDLKPLLSSLSANKEKLKESSHSGVVL----SVEEVEAGLKGLKVDQQVKNSTPFMAEH 461
V LSS + H+G++ V + G Q ++ +
Sbjct: 2468 PVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPA 2527
Query: 462 LEETLSAVTNNRQLKKDGDMTAFNKLVSTMKASG-----TLPSQPKVSRNLESHLMSPAE 516
E S+ +++ ++ + S+ +S +LP QP+V+ + SP
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALK---RVPSPTP 2584
Query: 517 IPGQPVPKNILQELLGQPVQRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAA 576
P + V + E +R +SS+ S S ++S + S S + ++
Sbjct: 2585 APKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2644
Query: 577 SADYLRPRIPSPIGFTPGPQQLLGDP--FQGMRKPMSPITAQMSQLELQQAALEGLALPH 634
S+ P P P P P P + R P PI + L + +E
Sbjct: 2645 SSSSPSPAKPGPQAL-PKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVE------ 2697
Query: 635 DLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAP 684
+ QP Q + G R Q+ ++SP+ R + SP P
Sbjct: 2698 ----RRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRP 2743
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 40.4 bits (93), Expect = 0.008
Identities = 49/187 (26%), Positives = 71/187 (37%), Gaps = 23/187 (12%)
Query: 784 RPKATGRKTPTLASPVPTTPFLRPVHQVPL---VPHV-PMVRPAHQLHPGLVQRMLAQGV 839
+P G++ P LA P P L P VPL PH+ P + PA Q+ + L
Sbjct: 723 QPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQ 782
Query: 840 HP-----QHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHP------LLNPR 888
P Q P + V+PP L+ + G+ + P +P P ++ P
Sbjct: 783 APLQPLAQVPPQMPPIPVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPS 842
Query: 889 PGTPLHLAMVQQQLQRSVL-HPPGSG-SHAAAVSVQTTPQNVPSRSGLP------HMHSQ 940
PL A LQ L HPPG+ + V P +P + P +HS
Sbjct: 843 LAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSA 902
Query: 941 LEHRPSQ 947
+ P Q
Sbjct: 903 VAQLPGQ 909
Score = 35.0 bits (79), Expect = 0.35
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 20/106 (18%)
Query: 793 PTLASPVPTTPFLRPVHQV--PLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQT 850
P+LA+P+P P+ V P P P+ P + P P +P L
Sbjct: 841 PSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNA----------PATIPLL--- 887
Query: 851 GVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPR--PGTPLH 894
V PPG+ + + GQP YP A+ P + P P +P H
Sbjct: 888 AVAPPGVAALSIHSAVAQLPGQPVYP---AAFPQMAPTDVPPSPHH 930
Score = 32.7 bits (73), Expect = 1.7
Identities = 36/139 (25%), Positives = 51/139 (36%), Gaps = 6/139 (4%)
Query: 839 VHPQHLPSL--LQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLA 896
V PQ LPSL Q PG+ + + + P Q +P PA S + P P TP+
Sbjct: 661 VLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTG 720
Query: 897 MVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLA 956
Q PP V VP + PH+ L P+ + +P L
Sbjct: 721 PGQPAPPGQ--QPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYL--APASQVGAPAQLK 776
Query: 957 KWFGSDVLQQPLPSMPAKV 975
QPL +P ++
Sbjct: 777 PLQMPQAPLQPLAQVPPQM 795
Score = 32.3 bits (72), Expect = 2.2
Identities = 58/215 (26%), Positives = 80/215 (37%), Gaps = 30/215 (13%)
Query: 667 VTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDS 726
V + PAP SS P P +S+ S P Y+ + SKE+P+ S
Sbjct: 1318 VAEHPAP-EAPESSPPLPLSSLPPEASQDSAP-------YKDQLSSKEQPS-----FLAS 1364
Query: 727 KEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPK 786
++ +A N + P A SSP + + ST A+ +
Sbjct: 1365 QQLLSQAGPSNPPGAPPAPLAP--SSPPVTALPQDGAAPATSTMPEPASGTASQ------ 1416
Query: 787 ATGRKTPT-LASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLP 845
A G TP L S + T+ L H+ PL V+P L GL A
Sbjct: 1417 AGGPGTPQGLTSELETSQPLAETHEAPLA-----VQP---LVVGLAPCTPAPEAASTRDA 1468
Query: 846 SLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAA 880
S + + PP + S G P LGQP LPAA
Sbjct: 1469 SAPREPLPPPAPEPSPHSGTPQPALGQPAPLLPAA 1503
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 40.0 bits (92), Expect = 0.011
Identities = 76/310 (24%), Positives = 96/310 (30%), Gaps = 52/310 (16%)
Query: 668 TKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSK 727
T P P ++S P ++TS S TP S + S P A+ +
Sbjct: 1002 TAPPTPSPGPSASPGPPGPALTSDSSRELTPHSALTSEATSDAPDTSPPTPDPAS--RTN 1059
Query: 728 EDTQKASEENLLS---SSSVPSADRDSSPTTNSKLSALQRSSCSTP-----LSQANRYTK 779
D S + LS SS VP+ + SPT L S STP LS +
Sbjct: 1060 PDLILTSPDFALSTPDSSVVPALTPEPSPTPLPTLPKELTSDPSTPSEVTSLSPTSEQVP 1119
Query: 780 EQDYRP-----------KATGRKTPTLASPVPTT---PFLRP----VHQVPLVPHVPMV- 820
E D P R SP PTT P + P + PH P
Sbjct: 1120 ESDTTPDLDTTPYSSTVSEYSRSPDPSPSPHPTTTPDPTMAPDPITTLNPTVTPHFPTTP 1179
Query: 821 RPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGP-ILGQPF----- 874
P HP + H +P T P ++H I P QPF
Sbjct: 1180 HPTTTPHPTTI-------THSTMIPD--PTTTPQPFTTITHSTMIPDPTTTPQPFTTMQP 1230
Query: 875 --YPLPAASHPLLNPRPGTPLHLAMVQQQL---QRSVLHPPGSGSHAAAVSVQTT---PQ 926
P HP P P T H M+ Q P + H TT P
Sbjct: 1231 TTTPHSTTPHPTTTPHPTTITHSTMIPDPTTTPQPFTTMQPTTMPHPTTTPHPTTTPHPT 1290
Query: 927 NVPSRSGLPH 936
P + PH
Sbjct: 1291 TTPHPTTTPH 1300
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 40.0 bits (92), Expect = 0.011
Identities = 49/156 (31%), Positives = 59/156 (37%), Gaps = 48/156 (30%)
Query: 787 ATGRKTPT-LASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLP 845
ATG+ P A P P P P P P++RP + G +PQ L
Sbjct: 601 ATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNP------------GANPQ-LR 647
Query: 846 SLL------QTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQ 899
SLL QTGV PP L HLQ P L LP P H + Q
Sbjct: 648 SLLLNPPPPQTGVPPPQASLHHLQPPGAPAL------LP-------------PPHQGLGQ 688
Query: 900 QQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLP 935
QL +LHPP Q+ P +P R+ LP
Sbjct: 689 PQLGPPLLHPP---------PAQSWPAQLPPRAPLP 715
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 39.7 bits (91), Expect = 0.014
Identities = 89/409 (21%), Positives = 148/409 (36%), Gaps = 70/409 (17%)
Query: 465 TLSAVTNNRQLKKDGDMTAFNKLVSTMKASGTLPSQPKVSRNLESHLMSPAEIPGQPVPK 524
T S T + G MTA ++ + + T P+ L +H+ + P
Sbjct: 1968 THSPPTGSSPFSSTGPMTA-----TSFQTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTH 2022
Query: 525 NILQELLGQPVQRPASSNLLSGLMGSLEPTTSL--LGQRAPSPPLSQV----------FQ 572
++ + Q S+++ S G++ P T+L G +PP++ F
Sbjct: 2023 TVI---ITTHTQMATSASIHSTPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQTHSSFS 2079
Query: 573 TRAASADYLRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLELQQAALEGLAL 632
T AS+ ++ P + P P SPIT Q+ L
Sbjct: 2080 TATASSSFISSSSWLPQNSSSRP-------------PSSPITTQLPHLS-------SATT 2119
Query: 633 PHDLAVQAANFYQPGFGKPQVDRTRDGF--RNRQQRVTKSPAPVHRGNSSSPAPAASITS 690
P Q ++ + P P T + + T SP+ G SSS A ++
Sbjct: 2120 PVSTTNQLSSSFSPS---PSAPSTVSSYVPSSHSSPQTSSPSV---GTSSSFVSAPVHST 2173
Query: 691 MLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSS-----SSVP 745
LS + S S P+S A+ T +A+ + +SS + +P
Sbjct: 2174 TLSSGSHSSLSTHPTTASVSASPLFPSSPAAST------TIRATLPHTISSPFTLSALLP 2227
Query: 746 SADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFL 805
+ SPT +S L++ + STP + A+ +T T R T +L + VPT+ F+
Sbjct: 2228 ISTVTVSPTPSSHLASSTIAFPSTPRTTASTHTAPAFSSQSTTSRST-SLTTRVPTSGFV 2286
Query: 806 RPVHQVPLVPHVPMVRPAHQLHPG---------LVQRMLAQGVHPQHLP 845
V +P P+ + HPG L + A G P P
Sbjct: 2287 SLTSGVTGIPTSPVTNLTTR-HPGPTLSPTTRFLTSSLTAHGSTPASAP 2334
Score = 32.3 bits (72), Expect = 2.2
Identities = 37/156 (23%), Positives = 55/156 (35%), Gaps = 9/156 (5%)
Query: 739 LSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASP 798
L SS+ PS + +P + ++ L + S+ + T P+ T TP S
Sbjct: 1232 LLSSTGPSPSSNHTPASPTQTPLLPATLTSS------KPTASSGEPPRPTTAVTPQATSG 1285
Query: 799 VPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLP--PG 856
+P T LR P V A P + LP+ +G P P
Sbjct: 1286 LPPTATLRSTATKPTVTQATTRATASTASPATTSTAQSTTRTTMTLPTPATSGTSPTLPK 1345
Query: 857 MDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTP 892
L G + P P PA++ P+PG P
Sbjct: 1346 STNQELPGTTATQTTGP-RPTPASTTGPTTPQPGQP 1380
Score = 32.3 bits (72), Expect = 2.2
Identities = 67/318 (21%), Positives = 106/318 (33%), Gaps = 74/318 (23%)
Query: 682 PAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSS 741
P P ++T + PT+ +R + K A+ +A + T ++ ++
Sbjct: 1272 PRPTTAVTPQATSGLPPTATLRS---TATKPTVTQATTRATASTASPATTSTAQSTTRTT 1328
Query: 742 SSVPS-ADRDSSPT----TNSKLSALQRSSCS----TPLSQANRYTKE--QDYRPKATG- 789
++P+ A +SPT TN +L + + TP S T + Q RP AT
Sbjct: 1329 MTLPTPATSGTSPTLPKSTNQELPGTTATQTTGPRPTPASTTGPTTPQPGQPTRPTATET 1388
Query: 790 ------------------RKTPTLASPVP------------TTPFLRPVHQVPLVP-HVP 818
PT SPVP TT + P H +P HVP
Sbjct: 1389 TQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPTHVP 1448
Query: 819 -----MVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQP 873
+V P+ +A P TG +PP L +G P
Sbjct: 1449 PFSTSLVTPSTHTVITPTHAQMATSASNHSAP----TGTIPPPTTLK----ATGSTHTAP 1500
Query: 874 FYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTT------PQN 927
P+ GT + + LH S +H V+ +T P +
Sbjct: 1501 ---------PITPTTSGTSQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTSTTTITPNPTS 1551
Query: 928 VPSRSGLPHMHSQLEHRP 945
+R+ + H +S RP
Sbjct: 1552 TRTRTPVAHTNSATSSRP 1569
Score = 31.2 bits (69), Expect = 5.0
Identities = 58/278 (20%), Positives = 98/278 (35%), Gaps = 31/278 (11%)
Query: 667 VTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDS 726
VT S V + A +ASI S + + P + ++ + + + S
Sbjct: 2017 VTPSTHTVIITTHTQMATSASIHSTPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQTHS 2076
Query: 727 KEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPK 786
T AS + SSS +P P++ SS +TP+S N+ + P
Sbjct: 2077 SFSTATASSSFISSSSWLPQNSSSRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPS 2136
Query: 787 ATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPS 846
A T++S VP++ H P + + + + L+ G H S
Sbjct: 2137 APS----TVSSYVPSS------HSSPQTSSPSVGTSSSFVSAPVHSTTLSSGSH-----S 2181
Query: 847 LLQTGVLPPGMDLSHLQGISGPILGQPFYP-LPAASHPLLNPRPGT---PLHLAMVQQQL 902
L T + + P +P PAAS + P T P L+ +
Sbjct: 2182 SLST------------HPTTASVSASPLFPSSPAASTTIRATLPHTISSPFTLSALLPIS 2229
Query: 903 QRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQ 940
+V P S ++ ++ +TP+ S P SQ
Sbjct: 2230 TVTVSPTPSSHLASSTIAFPSTPRTTASTHTAPAFSSQ 2267
>gi|148612879 polyhomeotic like 3 [Homo sapiens]
Length = 995
Score = 39.3 bits (90), Expect = 0.018
Identities = 97/455 (21%), Positives = 170/455 (37%), Gaps = 74/455 (16%)
Query: 538 PASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGPQQ 597
P +S++ + + T + R P +S + + ++ + P Q
Sbjct: 19 PGTSSVSTTTSSTTTTTITTSSSRMQQPQISVYSGSDRHAVQVIQQALHRP---PSSAAQ 75
Query: 598 LLGDPFQGMRKPMSPITAQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVDRT- 656
L + ++ + TA + Q L + L+ LA AVQA+ G+P T
Sbjct: 76 YLQQMYAAQQQHLMLHTAALQQQHLSSSQLQSLA-----AVQASL----SSGRPSTSPTG 126
Query: 657 ----RDGFRNRQQRVTKSPAP---VHRGNSSSPAPAASIT--SMLSPSFTPTSVIRK--M 705
+ ++ SP P + R +SS + + SIT +ML S +PT + M
Sbjct: 127 SVTQQSSMSQTSINLSTSPTPAQLISRSQASS-STSGSITQQTMLLGSTSPTLTASQAQM 185
Query: 706 YESKEKSKEEPASGKAAL--------GDSKEDTQKASEE--NLLSSSS---VPSADRDSS 752
Y + PA+ AA+ S Q A+ + NL S V S+ ++
Sbjct: 186 YLRAQMLIFTPATTVAAVQSDIPVVSSSSSSSCQSAATQVQNLTLRSQKLGVLSSSQNGP 245
Query: 753 PTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGR-KTPTLASPVPTTPFLRPVHQV 811
P + S+ +L + C + + ++D P++ + ++P+L S +HQ+
Sbjct: 246 PKSTSQTQSL--TICHNKTTVTSSKISQRDPSPESNKKGESPSLESRSTAVTRTSSIHQL 303
Query: 812 -------PLVPH-------VPMVRPAHQL-HPGLVQRMLAQGVHPQHLPSLLQTGVLPPG 856
P+ PH +P+ P ++ H L+ + Q + P L + Q PP
Sbjct: 304 IAPASYSPIQPHSLIKHQQIPLHSPPSKVSHHQLILQQQQQQIQPITLQNSTQDP--PPS 361
Query: 857 MDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHA 916
LQ + LP A P H + +Q + P S S
Sbjct: 362 QHCIPLQN----------HGLPPA------PSNAQSQHCSPIQSHPSPLTVSPNQSQSAQ 405
Query: 917 AAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSS 951
+V V P + PS+S +H Q +P SS
Sbjct: 406 QSVVVSPPPPHSPSQSPTIIIHPQALIQPHPLVSS 440
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 39.3 bits (90), Expect = 0.018
Identities = 67/301 (22%), Positives = 111/301 (36%), Gaps = 39/301 (12%)
Query: 670 SPAPVHRG--NSSSPAPAASITSMLSPSFTPTSVIRKMYESKEK-------SKEEPASGK 720
+P+P++ S SPA ++++++ +PS + + +RK+ + E+ S+ P S
Sbjct: 30 TPSPLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGSSLSSESSPVSSP 89
Query: 721 AALGDSKEDTQKASEENLL----SSSSVPSADR----DSSPTTNSKLSALQRSSCSTPLS 772
A S T K + SVPS + T N + R + S
Sbjct: 90 ATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSS 149
Query: 773 QANR---YTKEQDYRPKATGRKTPT--LASPVPTTPFLRPVHQVPLVPHVPMVRPAHQ-L 826
R + + KA G P+ L++P P V Q P + + RP H +
Sbjct: 150 SGGRERLIVEPPLPQEKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVV 209
Query: 827 HPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLN 886
P V + P H L+ LPP G+ ++P A HP
Sbjct: 210 PPSTVTEDYLRSFRPYHTTDDLRMSSLPP-------LGLDPATAAAYYHPSYLAPHPF-- 260
Query: 887 PRPGTPLHLAMVQQQLQRSVLHPPGSGS----HAAAVSVQTTPQNVP---SRSGLPHMHS 939
P P + + L+ P GS H +A+ + + P S S L +HS
Sbjct: 261 PHPAFRMDDSYCLSALRSPFYPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHS 320
Query: 940 Q 940
+
Sbjct: 321 E 321
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 39.3 bits (90), Expect = 0.018
Identities = 39/125 (31%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 661 RNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGK 720
R R + + SP PV RG SSSP S SPS P IR++ + EP K
Sbjct: 687 RPRAPQTSSSPPPVRRGASSSPQRRQS----PSPSTRP---IRRVSRT-----PEPKKIK 734
Query: 721 AALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKE 780
A S + ++ S +S S P+A + +P S +Q S ST S A K
Sbjct: 735 KAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPP-----SPVQSQSPSTNWSPAVPVKKA 789
Query: 781 QDYRP 785
+ P
Sbjct: 790 KSPTP 794
Score = 37.0 bits (84), Expect = 0.091
Identities = 82/344 (23%), Positives = 123/344 (35%), Gaps = 72/344 (20%)
Query: 661 RNRQQRVTKSPAPV------HRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKE 714
R R+ RV+ SP H+G +P SP+ P V ++ ES E
Sbjct: 422 RTRKSRVSVSPGRTSGKVTKHKGTEKRESP--------SPAPKPRKV--ELSES-----E 466
Query: 715 EPASGKAALGDSKEDTQKASEENLLSS--SSVPSADRDSSP----TTNSKLSALQRSSCS 768
E GK A DS + ++ +N SS S S+ D P N ++ +R S S
Sbjct: 467 EDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS 526
Query: 769 TPLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHP 828
S + R ++++ P+ R++P SP PT P P P + P
Sbjct: 527 RSASPSPR-KRQKETSPRGRRRRSP---SPPPTRRRRSP---------SPAPPPRRRRTP 573
Query: 829 GLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPR 888
R + PS PP S P + + + P P +P
Sbjct: 574 TPPPR--------RRTPS-------PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASP- 617
Query: 889 PGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQ--------NVPSRSGLPHMHSQ 940
P P A +R V H P ++ V+ + +P + PSRS Q
Sbjct: 618 PPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQ 677
Query: 941 --LEHRPS------QRSSSPVGLAKWFGSDVLQQPLPSMPAKVI 976
H PS Q SSSP + + S ++ PS + I
Sbjct: 678 PNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPI 721
Score = 33.5 bits (75), Expect = 1.0
Identities = 56/262 (21%), Positives = 89/262 (33%), Gaps = 39/262 (14%)
Query: 661 RNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSP---SFTPTSVIRKMYES--------- 708
R R++R + SP P R S SPAP +P TP+ R+ S
Sbjct: 543 RGRRRR-SPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQ 601
Query: 709 ---------KEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKL 759
K ++ P K S ++ S S P R SP+ +SK
Sbjct: 602 RRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKR-RSPSLSSKH 660
Query: 760 SALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPV------------PTTPFLRP 807
S ST +++ + K P+ +T + PV +P RP
Sbjct: 661 RKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRP 720
Query: 808 VHQVPLVPHVPMVRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISG 867
+ +V P ++ A P V+R+ + + + + P S +Q S
Sbjct: 721 IRRVSRTPEPKKIKKAASPSPQSVRRVSSS----RSVSGSPEPAAKKPPAPPSPVQSQSP 776
Query: 868 PILGQPFYPLPAASHPLLNPRP 889
P P+ A P +P P
Sbjct: 777 STNWSPAVPVKKAKSPTPSPSP 798
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,423,778
Number of Sequences: 37866
Number of extensions: 2449286
Number of successful extensions: 9748
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 8672
Number of HSP's gapped (non-prelim): 1377
length of query: 985
length of database: 18,247,518
effective HSP length: 112
effective length of query: 873
effective length of database: 14,006,526
effective search space: 12227697198
effective search space used: 12227697198
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.