Guide to the Human Genome
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Name: ANKRD17 Sequence: fasta or formatted (2603aa) NCBI GI: 38683807
Description:

ankyrin repeat domain protein 17 isoform a

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [2352aa] ankyrin repeat domain protein 17 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3        269           4
 C cysteine            1.3         33           2
 D aspartate           3.9        101           4
 E glutamate           6.4        167           4
 F phenylalanine       1.5         40           1
 G glycine             7.7        201          15
 H histidine           2.7         70           2
 I isoleucine          3.8         99           2
 K lysine              4.9        127           3
 L leucine             8.6        224           3
 M methionine          2.1         55           1
 N asparagine          4.8        124           3
 P proline             7.8        202           3
 Q glutamine           4.7        123           6
 R arginine            4.0        105           2
 S serine             10.4        272           5
 T threonine           7.1        186           5
 V valine              6.3        165           2
 W tryptophan          0.4         10           1
 Y tyrosine            1.2         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.608   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.554   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.550   ANKHD1-EIF4EBP3 protein 
ANKHD1                0.175   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.169   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKRD50               0.045   ankyrin repeat domain 50 
ANK2                  0.044   ankyrin 2 isoform 3 
ANK2                  0.044   ankyrin 2 isoform 2 
ANK2                  0.044   ankyrin 2 isoform 1 
ANK3                  0.041   ankyrin 3 isoform 1 
ANK1                  0.040   ankyrin 1 isoform 9 
ANK1                  0.040   ankyrin 1 isoform 1 
ANK1                  0.040   ankyrin 1 isoform 3 
ANK1                  0.040   ankyrin 1 isoform 2 
ANK1                  0.040   ankyrin 1 isoform 4 
KIDINS220             0.031   kinase D-interacting substrate of 220 kDa 
ANKRD52               0.029   ankyrin repeat domain 52 
TANC2                 0.029   tetratricopeptide repeat, ankyrin repeat and coiled...
TNKS                  0.028   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
RIPK4                 0.028   ankyrin repeat domain 3 
ANKRD44               0.028   ankyrin repeat domain 44 
ANKRD28               0.027   ankyrin repeat domain 28 
TNKS2                 0.027   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.026   ankyrin repeat and kinase domain containing 1 
TRPA1                 0.026   ankyrin-like protein 1 
TANC1                 0.026   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.026   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKS6                 0.023   ankyrin repeat and sterile alpha motif domain contai...
LOC441869             0.023   hypothetical protein LOC441869 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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