LEF1 11155

Name: LEF1	Sequence: fasta or formatted (371aa)		NCBI GI: 195222732
Description: lymphoid enhancer-binding factor 1 isoform 2		Referenced in: SOX Family T cells
Other entries for this name: alt prot [386aa] lymphoid enhancer-binding factor 1 isoform 3 alt prot [399aa] lymphoid enhancer-binding factor 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 22 2 C cysteine 0.5 2 1 D aspartate 4.6 17 2 E glutamate 7.3 27 3 F phenylalanine 1.6 6 1 G glycine 8.4 31 8 H histidine 5.9 22 2 I isoleucine 5.1 19 2 K lysine 6.7 25 4 L leucine 5.4 20 1 M methionine 3.8 14 2 N asparagine 3.5 13 2 P proline 11.9 44 2 Q glutamine 4.9 18 1 R arginine 4.3 16 2 S serine 8.4 31 2 T threonine 3.8 14 2 V valine 3.5 13 2 W tryptophan 0.8 3 1 Y tyrosine 3.8 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lymphoid enhancer-binding factor 1 isoform 2 LEF1 0.980 lymphoid enhancer-binding factor 1 isoform 1 LEF1 0.974 lymphoid enhancer-binding factor 1 isoform 3 TCF7L2 0.491 transcription factor 7-like 2 isoform 6 TCF7L2 0.491 transcription factor 7-like 2 isoform 4 TCF7L2 0.489 transcription factor 7-like 2 isoform 2 TCF7L2 0.489 transcription factor 7-like 2 isoform 5 TCF7L2 0.466 transcription factor 7-like 2 isoform 1 TCF7L1 0.441 HMG-box transcription factor TCF-3 TCF7L2 0.408 transcription factor 7-like 2 isoform 3 TCF7 0.365 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.291 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.291 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.291 transcription factor 7 (T-cell specific, HMG-box) 5... TCF7 0.291 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.290 transcription factor 7 (T-cell specific, HMG-box) is... TCF7 0.289 transcription factor 7 (T-cell specific, HMG-box) 6... CIC 0.062 capicua homolog SOX6 0.051 SRY (sex determining region Y)-box 6 isoform 4 [Hom... SOX6 0.051 SRY (sex determining region Y)-box 6 isoform 3 [Hom... SOX6 0.051 SRY (sex determining region Y)-box 6 isoform 1 [Homo... SOX6 0.051 SRY (sex determining region Y)-box 6 isoform 2 [Homo... SOX30 0.047 SRY (sex determining region Y)-box 30 isoform b [Homo... SOX30 0.047 SRY (sex determining region Y)-box 30 isoform a [Hom... SOX5 0.045 SRY (sex determining region Y)-box 5 isoform c [Homo... SOX5 0.045 SRY (sex determining region Y)-box 5 isoform b [Homo... SOX5 0.045 SRY (sex determining region Y)-box 5 isoform a [Homo... SOX13 0.043 SRY-box 13 SOX11 0.042 SRY-box 11 SOX7 0.040 SRY-box 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.